mRNA_M-pyrifera_M_contig9086.21065.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig9086.21065.1 vs. uniprot
Match: D7G687_ECTSI (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G687_ECTSI) HSP 1 Score: 224 bits (571), Expect = 1.940e-68 Identity = 114/119 (95.80%), Postives = 116/119 (97.48%), Query Frame = 3 Query: 3 NRAGFADVEKAIAKYGQKAKEGSLALEDMAGGSFTISNGGVFGSLMGTPIINPPQSAILGMHATKMRAVVSPDGQVVARPMMYLALTYDHRLIDGREAVTFLKSVALKVQDPTRLLLDL 359 N GFADVEKAIA+YG+KAKEGSLALEDMAGGSFTISNGGVFGSLMGTPIINPPQSAILGMHATKMRAVV PDGQVVARPMMYLALTYDHRLIDGREAVTFLKSVALKVQDPTRLLLDL Sbjct: 291 NHRGFADVEKAIAEYGRKAKEGSLALEDMAGGSFTISNGGVFGSLMGTPIINPPQSAILGMHATKMRAVVGPDGQVVARPMMYLALTYDHRLIDGREAVTFLKSVALKVQDPTRLLLDL 409
BLAST of mRNA_M-pyrifera_M_contig9086.21065.1 vs. uniprot
Match: A0A6H5KK69_9PHAE (Dihydrolipoyllysine-residue succinyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK69_9PHAE) HSP 1 Score: 223 bits (567), Expect = 3.170e-67 Identity = 113/116 (97.41%), Postives = 115/116 (99.14%), Query Frame = 3 Query: 12 GFADVEKAIAKYGQKAKEGSLALEDMAGGSFTISNGGVFGSLMGTPIINPPQSAILGMHATKMRAVVSPDGQVVARPMMYLALTYDHRLIDGREAVTFLKSVALKVQDPTRLLLDL 359 GFADVEKAIA+YG+KAKEGSLALEDMAGGSFTISNGGVFGSLMGTPIINPPQSAILGMHATKMRAVV PDGQVVARPMMYLALTYDHRLIDGREAVTFLKSVALKVQDPTRLLLDL Sbjct: 349 GFADVEKAIAEYGRKAKEGSLALEDMAGGSFTISNGGVFGSLMGTPIINPPQSAILGMHATKMRAVVGPDGQVVARPMMYLALTYDHRLIDGREAVTFLKSVALKVQDPTRLLLDL 464
BLAST of mRNA_M-pyrifera_M_contig9086.21065.1 vs. uniprot
Match: A0A835Z206_9STRA (Dihydrolipoyllysine-residue succinyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z206_9STRA) HSP 1 Score: 197 bits (501), Expect = 2.100e-58 Identity = 101/115 (87.83%), Postives = 107/115 (93.04%), Query Frame = 3 Query: 15 FADVEKAIAKYGQKAKEGSLALEDMAGGSFTISNGGVFGSLMGTPIINPPQSAILGMHATKMRAVVSPDGQVVARPMMYLALTYDHRLIDGREAVTFLKSVALKVQDPTRLLLDL 359 FAD+EKAIA Y KAK G LALEDMAGGSFTISNGGVFGSLMGTPIINPPQSAILGMHATKMRAVV DGQVVARPMMYLALTYDHR++DGREAVTFLKSVA K++DP+RLLLDL Sbjct: 256 FADIEKAIADYAVKAKAGKLALEDMAGGSFTISNGGVFGSLMGTPIINPPQSAILGMHATKMRAVVV-DGQVVARPMMYLALTYDHRMVDGREAVTFLKSVANKIEDPSRLLLDL 369
BLAST of mRNA_M-pyrifera_M_contig9086.21065.1 vs. uniprot
Match: B7GBE7_PHATC (Dihydrolipoyllysine-residue succinyltransferase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GBE7_PHATC) HSP 1 Score: 196 bits (498), Expect = 7.260e-58 Identity = 96/115 (83.48%), Postives = 108/115 (93.91%), Query Frame = 3 Query: 15 FADVEKAIAKYGQKAKEGSLALEDMAGGSFTISNGGVFGSLMGTPIINPPQSAILGMHATKMRAVVSPDGQVVARPMMYLALTYDHRLIDGREAVTFLKSVALKVQDPTRLLLDL 359 FADVE+ IA YGQKAKEGSL+L+DMAGG+FTISNGGVFGSLMGTPIINPPQSAILGMHATKMRAVV+ G+VVARPMMYLALTYDHRLIDGRE VTFLKS+A K+ DP++LLL++ Sbjct: 263 FADVERNIAAYGQKAKEGSLSLDDMAGGTFTISNGGVFGSLMGTPIINPPQSAILGMHATKMRAVVNEQGEVVARPMMYLALTYDHRLIDGREGVTFLKSIAEKIADPSKLLLEI 377
BLAST of mRNA_M-pyrifera_M_contig9086.21065.1 vs. uniprot
Match: W7TJE0_9STRA (Dihydrolipoyllysine-residue succinyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJE0_9STRA) HSP 1 Score: 198 bits (503), Expect = 1.090e-57 Identity = 98/118 (83.05%), Postives = 109/118 (92.37%), Query Frame = 3 Query: 6 RAGFADVEKAIAKYGQKAKEGSLALEDMAGGSFTISNGGVFGSLMGTPIINPPQSAILGMHATKMRAVVSPDGQVVARPMMYLALTYDHRLIDGREAVTFLKSVALKVQDPTRLLLDL 359 R FA VE+ IA YG+KAKEG+LALEDMAGG+FTISNGGVFGSL+GTPIINPPQSAILGMHATKMRAVV DGQV+ARPMMYLALTYDHRLIDGREAVTFLKSVA K++DP R++L+L Sbjct: 348 RMSFAGVERQIAMYGKKAKEGALALEDMAGGTFTISNGGVFGSLLGTPIINPPQSAILGMHATKMRAVVGKDGQVMARPMMYLALTYDHRLIDGREAVTFLKSVAAKIEDPRRMVLEL 465
BLAST of mRNA_M-pyrifera_M_contig9086.21065.1 vs. uniprot
Match: A0A7S2K9K3_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2K9K3_9STRA) HSP 1 Score: 186 bits (472), Expect = 3.060e-57 Identity = 92/115 (80.00%), Postives = 103/115 (89.57%), Query Frame = 3 Query: 15 FADVEKAIAKYGQKAKEGSLALEDMAGGSFTISNGGVFGSLMGTPIINPPQSAILGMHATKMRAVVSPDGQVVARPMMYLALTYDHRLIDGREAVTFLKSVALKVQDPTRLLLDL 359 FADVE+ IA +G+KA+EGSL+L+DM GG+FTISNGGVFGSLMGTPIIN PQSAILGMHATKMRAVV G VVARPMMYLALTYDHRLIDGRE VTFLKSVA K+ DP+RL+ D+ Sbjct: 8 FADVERTIALFGKKAREGSLSLDDMTGGTFTISNGGVFGSLMGTPIINQPQSAILGMHATKMRAVVDEKGNVVARPMMYLALTYDHRLIDGREGVTFLKSVADKITDPSRLVFDI 122
BLAST of mRNA_M-pyrifera_M_contig9086.21065.1 vs. uniprot
Match: A0A482RWZ2_9ARCH (Dihydrolipoamide succinyltransferase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RWZ2_9ARCH) HSP 1 Score: 187 bits (476), Expect = 6.490e-57 Identity = 95/115 (82.61%), Postives = 105/115 (91.30%), Query Frame = 3 Query: 15 FADVEKAIAKYGQKAKEGSLALEDMAGGSFTISNGGVFGSLMGTPIINPPQSAILGMHATKMRAVVSPDGQVVARPMMYLALTYDHRLIDGREAVTFLKSVALKVQDPTRLLLDL 359 FAD+EKAI YG+KAKEG+LALEDMAGG+FTISNGGVFGSL GTPIINPPQSAILGMHATKMRAVV +G+V ARPMMYLALTYDHRLIDGREAVTFLK +A K++DP R+LL L Sbjct: 76 FADIEKAIGMYGKKAKEGTLALEDMAGGTFTISNGGVFGSLFGTPIINPPQSAILGMHATKMRAVVV-NGKVEARPMMYLALTYDHRLIDGREAVTFLKGIANKIEDPGRMLLTL 189
BLAST of mRNA_M-pyrifera_M_contig9086.21065.1 vs. uniprot
Match: A0A7R9WST9_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WST9_9STRA) HSP 1 Score: 188 bits (477), Expect = 8.320e-57 Identity = 93/115 (80.87%), Postives = 102/115 (88.70%), Query Frame = 3 Query: 15 FADVEKAIAKYGQKAKEGSLALEDMAGGSFTISNGGVFGSLMGTPIINPPQSAILGMHATKMRAVVSPDGQVVARPMMYLALTYDHRLIDGREAVTFLKSVALKVQDPTRLLLDL 359 FADVE+ I Y KAKEG L+L+DMAGG+FTISNGGVFGSLMGTPIINPPQSAILGMHATKMR VV+ G VVARPMMYLALTYDHRLIDGRE VTFLKS+A K+ DPT+LLLD+ Sbjct: 94 FADVERNIGMYATKAKEGKLSLDDMAGGTFTISNGGVFGSLMGTPIINPPQSAILGMHATKMRPVVNDKGDVVARPMMYLALTYDHRLIDGREGVTFLKSIADKISDPTKLLLDV 208
BLAST of mRNA_M-pyrifera_M_contig9086.21065.1 vs. uniprot
Match: A0A7S3Y2G2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2G2_HETAK) HSP 1 Score: 189 bits (479), Expect = 1.110e-56 Identity = 96/116 (82.76%), Postives = 104/116 (89.66%), Query Frame = 3 Query: 15 FADVEKAIAKYGQKAKEGSLALEDMAGGSFTISNGGVFGSLMGTPIINPPQSAILGMHATKMRAVVSPD-GQVVARPMMYLALTYDHRLIDGREAVTFLKSVALKVQDPTRLLLDL 359 FADVE IA YGQKAK G LALE+MAGG+FTISNGGVFGSLMGTPIINPPQSAILGMHATK+R VV+P GQV ARPMMYLALTYDHRLIDGREAVTFLKS+A K++DP RL+L L Sbjct: 125 FADVESTIAMYGQKAKAGQLALEEMAGGTFTISNGGVFGSLMGTPIINPPQSAILGMHATKLRPVVNPKTGQVEARPMMYLALTYDHRLIDGREAVTFLKSIANKIEDPQRLILGL 240
BLAST of mRNA_M-pyrifera_M_contig9086.21065.1 vs. uniprot
Match: A0A1E7FAG1_9STRA (Putative 2-oxoglutarate dehydrogenase E2 subunit n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FAG1_9STRA) HSP 1 Score: 184 bits (467), Expect = 9.300e-56 Identity = 92/115 (80.00%), Postives = 103/115 (89.57%), Query Frame = 3 Query: 15 FADVEKAIAKYGQKAKEGSLALEDMAGGSFTISNGGVFGSLMGTPIINPPQSAILGMHATKMRAVVSPDGQVVARPMMYLALTYDHRLIDGREAVTFLKSVALKVQDPTRLLLDL 359 FADVE IA Y QKAK G+L+L+DM GG+FTISNGGVFGSLMGTPIIN PQSA+LGMHATKMRAVV+ G+VVARPMMYLALTYDHRLIDGRE VTFLKS+A KV DP++LLLD+ Sbjct: 60 FADVEHNIAAYVQKAKNGTLSLDDMTGGTFTISNGGVFGSLMGTPIINLPQSAVLGMHATKMRAVVNEKGEVVARPMMYLALTYDHRLIDGREGVTFLKSIAEKVSDPSKLLLDV 174 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9086.21065.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig9086.21065.1 >prot_M-pyrifera_M_contig9086.21065.1 ID=prot_M-pyrifera_M_contig9086.21065.1|Name=mRNA_M-pyrifera_M_contig9086.21065.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=92bp MAGGSFTISNGGVFGSLMGTPIINPPQSAILGMHATKMRAVVSPDGQVVAback to top mRNA from alignment at M-pyrifera_M_contig9086:7401..9707- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig9086.21065.1 ID=mRNA_M-pyrifera_M_contig9086.21065.1|Name=mRNA_M-pyrifera_M_contig9086.21065.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2307bp|location=Sequence derived from alignment at M-pyrifera_M_contig9086:7401..9707- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig9086:7401..9707- >mRNA_M-pyrifera_M_contig9086.21065.1 ID=mRNA_M-pyrifera_M_contig9086.21065.1|Name=mRNA_M-pyrifera_M_contig9086.21065.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=552bp|location=Sequence derived from alignment at M-pyrifera_M_contig9086:7401..9707- (Macrocystis pyrifera P11B4 male)back to top |