mRNA_M-pyrifera_M_contig90850.21063.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig90850.21063.1 vs. uniprot
Match: A0A3M2GPK6_ACTSX (Uncharacterized protein (Fragment) n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GPK6_ACTSX) HSP 1 Score: 92.8 bits (229), Expect = 1.920e-22 Identity = 54/96 (56.25%), Postives = 68/96 (70.83%), Query Frame = 1 Query: 1 VDTTILSIIAGAATFGLAGAFALLVGFGGREMGGELAAGRHLARLVRVGDEIEVDDLVGRIVALHPASVELEYQEG-SLHVPNTRLTRGDLRVRHQ 285 V+TTILSI A AA FG A AFAL+VG R++GGELAAGR+L RLVR GD IE+D +VA+HPA+VEL +G S H+P++RL V H+ Sbjct: 12 VETTILSIAAAAALFGSAAAFALVVGVSSRQVGGELAAGRYLQRLVRAGDRIELDGDRLEVVAVHPATVELRRPDGASRHLPHSRLLAEGFVVHHR 107
BLAST of mRNA_M-pyrifera_M_contig90850.21063.1 vs. uniprot
Match: A0A5Q2RKM6_9ACTN (Uncharacterized protein n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RKM6_9ACTN) HSP 1 Score: 73.2 bits (178), Expect = 1.380e-13 Identity = 42/97 (43.30%), Postives = 61/97 (62.89%), Query Frame = 1 Query: 1 VDTTILSIIAGAATFGLAGAFALLVGFGGREMGGELAAGRHLARLVRVGDEIEVD----DLVGRIVALHPASVELEYQEGS-LHVPNTRLTRGDLRV 276 V+TT+L I GA FGLA A A++VGFGGR + E+AAGR+L R++R GD +E+ + G + LHPA+VE+ G+ H+ N+ + RV Sbjct: 144 VNTTLLQITGGALLFGLAAAAAMIVGFGGRGVAAEVAAGRYLVRVLRTGDRVEIPLPEGTVTGVVAGLHPATVEVREDAGAHRHLANSAVLAAGPRV 240
BLAST of mRNA_M-pyrifera_M_contig90850.21063.1 vs. uniprot
Match: A0A7Y2NBU1_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y2NBU1_9ACTN) HSP 1 Score: 69.7 bits (169), Expect = 2.540e-12 Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 1 Query: 1 VDTTILSIIAGAATFGLAGAFALLVGFGGREMGGELAAGRHLARLVRVGDEIEVDDLVGRIVALHPASVELEYQEGSLHVPNTRLTRGDLRVRH 282 VDTTIL +I + A ALLVGFGGR++ E+AAGR+++R + V + VD +VA+HPA++E+ + G+ H+P T L R+ Sbjct: 143 VDTTILLVIVAVFGGSIGLASALLVGFGGRDIAREIAAGRYVSRYLGVDTTVTVDSETRTVVAMHPATIEVTGESGTTHLPYTALLENGFSTRN 236
BLAST of mRNA_M-pyrifera_M_contig90850.21063.1 vs. uniprot
Match: A0A6G0ACK3_9ACTN (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A6G0ACK3_9ACTN) HSP 1 Score: 67.8 bits (164), Expect = 1.400e-11 Identity = 42/93 (45.16%), Postives = 54/93 (58.06%), Query Frame = 1 Query: 1 VDTTILSIIAGAATFGLAGAFALLVGFGGREMGGELAAGRHLARLVRVGDEIEVDDLVGRIVALHPASVELEYQE-GSLHVPNTRLTRGDLRV 276 VDTTIL II AA A A LL G GGR + LAAGR L +R G + V GRIV +HP ++EL+ E G +H+P+TRL + + Sbjct: 143 VDTTILLIIVVAAVASPAIAAGLLAGLGGRGVAANLAAGRSLRHQLRAGQYLTVGGTSGRIVEIHPVTIELQTAEAGRVHIPHTRLLASEFTL 235
BLAST of mRNA_M-pyrifera_M_contig90850.21063.1 vs. uniprot
Match: A0A520Y0W8_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A520Y0W8_9ACTN) HSP 1 Score: 67.8 bits (164), Expect = 1.500e-11 Identity = 33/93 (35.48%), Postives = 57/93 (61.29%), Query Frame = 1 Query: 1 VDTTILSIIAGAATFGLAGAFALLVGFGGREMGGELAAGRHLARLVRVGDEIEVDDLVGRIVALHPASVELEYQEGS-LHVPNTRLTRGDLRV 276 V+ T+++++ + + +++G G R++ GE+AAGR+L V +GD + D GRIV +HPA++ELE +GS HVP ++L + V Sbjct: 143 VNITVVTVLVAVIALTVGASITVIIGHGSRQISGEIAAGRYLHSYVDIGDTVSTGDYAGRIVGVHPATLELEQADGSRTHVPYSKLLASGITV 235
BLAST of mRNA_M-pyrifera_M_contig90850.21063.1 vs. uniprot
Match: A0A7X5WQ34_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WQ34_9ACTN) HSP 1 Score: 65.5 bits (158), Expect = 5.220e-11 Identity = 35/46 (76.09%), Postives = 40/46 (86.96%), Query Frame = 1 Query: 1 VDTTILSIIAGAATFGLAGAFALLVGFGGREMGGELAAGRHLARLV 138 VDTTILS+IA A FGLAGAFALLVG GGR++G ELAAGR+L R+V Sbjct: 144 VDTTILSVIAAAVVFGLAGAFALLVGLGGRDLGAELAAGRYLHRMV 189
BLAST of mRNA_M-pyrifera_M_contig90850.21063.1 vs. uniprot
Match: A0A7C1Y635_9ACTN (Mechanosensitive ion channel n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1Y635_9ACTN) HSP 1 Score: 65.9 bits (159), Expect = 7.890e-11 Identity = 33/97 (34.02%), Postives = 56/97 (57.73%), Query Frame = 1 Query: 1 VDTTILSIIAGAATFGLAGAFALLVGFGGREMGGELAAGRHLARLVRVGDEIEVDDLVGRIVALHPASVELEYQEGS-LHVPNTRLTRGDLRVRHQG 288 +DTTI+++ A F A+++GFG RE+ G++AA R L +++ GD + ++D G +VA+H + EL G + VPN+R D+ + G Sbjct: 142 IDTTIITLAVAAVLFSAGAGAAMMIGFGSREVAGQVAAARALRQMLSEGDTVTIEDRTGLVVAIHSTATELSLAGGERVLVPNSRFLNHDIFISRAG 238
BLAST of mRNA_M-pyrifera_M_contig90850.21063.1 vs. uniprot
Match: A0A6C7E4H8_ILUCY (Uncharacterized protein n=1 Tax=Ilumatobacter coccineus (strain NBRC 103263 / KCTC 29153 / YM16-304) TaxID=1313172 RepID=A0A6C7E4H8_ILUCY) HSP 1 Score: 62.0 bits (149), Expect = 2.330e-9 Identity = 38/95 (40.00%), Postives = 57/95 (60.00%), Query Frame = 1 Query: 1 VDTTILSIIAGAATFGLAGAFALLVGFGGREMGGELAAGRHLARLVRVGDEIEV---------DDLV-GRIVALHPASVELEYQEGSLHVPNTRL 255 VDT +++I A FG+AG+ ALL G GGR++ GELAAGR +R GD I + +V G +V +HP +VE++ ++ +PN+RL Sbjct: 140 VDTAVVNIAVAALLFGVAGSLALLTGLGGRQVAGELAAGRAWRNSLRSGDRIRASIRQSTSGPEPIVEGVVVDVHPTAVEVDSLGTTVFIPNSRL 234
BLAST of mRNA_M-pyrifera_M_contig90850.21063.1 vs. uniprot
Match: A0A7X5WR47_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WR47_9ACTN) HSP 1 Score: 52.0 bits (123), Expect = 4.570e-7 Identity = 22/48 (45.83%), Postives = 36/48 (75.00%), Query Frame = 1 Query: 142 VGDEIEVDDLVGRIVALHPASVELEYQEGSLHVPNTRLTRGDLRVRHQ 285 +GDEIE + G +VA+HPA++EL + ++H+PN+R+ G+LRVR + Sbjct: 1 MGDEIEAAGIRGVVVAIHPATLELLVDDETVHLPNSRVFGGELRVRRE 48
BLAST of mRNA_M-pyrifera_M_contig90850.21063.1 vs. uniprot
Match: A0A7W0JLK5_9ACTN (Mechanosensitive ion channel n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W0JLK5_9ACTN) HSP 1 Score: 54.3 bits (129), Expect = 1.500e-6 Identity = 30/74 (40.54%), Postives = 44/74 (59.46%), Query Frame = 1 Query: 61 FALLVGFGGREMGGELAAGRHLARLVRVGDEIEVDDLVGRIVALHPASVELEYQEG-SLHVPNTRLTRGDLRVR 279 FAL G GGR++ +L+AGR + R+GD+IEV + GRI L A+ LE +G ++ +PN L + VR Sbjct: 171 FALAFGLGGRDVARQLSAGRSIGSAYRIGDQIEVAGVSGRISRLESAATVLEAGDGETIRIPNQMLLESVVTVR 244 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90850.21063.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig90850.21063.1 >prot_M-pyrifera_M_contig90850.21063.1 ID=prot_M-pyrifera_M_contig90850.21063.1|Name=mRNA_M-pyrifera_M_contig90850.21063.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=97bp VDTTILSIIAGAATFGLAGAFALLVGFGGREMGGELAAGRHLARLVRVGDback to top mRNA from alignment at M-pyrifera_M_contig90850:496..786- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig90850.21063.1 ID=mRNA_M-pyrifera_M_contig90850.21063.1|Name=mRNA_M-pyrifera_M_contig90850.21063.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=291bp|location=Sequence derived from alignment at M-pyrifera_M_contig90850:496..786- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig90850:496..786- >mRNA_M-pyrifera_M_contig90850.21063.1 ID=mRNA_M-pyrifera_M_contig90850.21063.1|Name=mRNA_M-pyrifera_M_contig90850.21063.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=582bp|location=Sequence derived from alignment at M-pyrifera_M_contig90850:496..786- (Macrocystis pyrifera P11B4 male)back to top |