mRNA_M-pyrifera_M_contig9082.21050.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig9082.21050.1 vs. uniprot
Match: D8LJF7_ECTSI (Photosystem II oxygen evolution complex protein PsbP n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF7_ECTSI) HSP 1 Score: 325 bits (833), Expect = 5.440e-109 Identity = 162/204 (79.41%), Postives = 186/204 (91.18%), Query Frame = 3 Query: 3 RQAVRMSAEAPLDRAQFLAASAAVATSSAILPLIALAEDEETQSADAVKEVKLVTTKLGGQLEPFADVSKGYRLAKPLGWNRYDGTSGEYAVKMVDLIDPTTVILLTNSPVKSDTQLSTLGSLGQVGEKLSKGRDLEIIASRERITEGIRLYDYEFKGGGRRELKTLAVNKNKLWNLTMGCPEKSWKKQEEVFKTLVDSFLPRL 614 R VRMSAE P DRAQFL SAAVA S+ +LPL+A+A++ ET S K+VKLVTTKLGG+LEPFADVSKGYRLAKPLGWNRYDGTSGEY VKMVDL+DPTT+ILLTNSPVKSDT+LSTLGS QVGEKLSKGRD+E++++R+R+TEGIRLYD+EFKGGGRRELKTL+VNKNKLWNLT+GCPEK+W+KQEE FKT+VDSFLPRL Sbjct: 33 RHTVRMSAEGPSDRAQFLTTSAAVAASAVMLPLVAVADEGETGS----KQVKLVTTKLGGKLEPFADVSKGYRLAKPLGWNRYDGTSGEYTVKMVDLVDPTTLILLTNSPVKSDTELSTLGSATQVGEKLSKGRDMELVSARDRVTEGIRLYDFEFKGGGRRELKTLSVNKNKLWNLTLGCPEKAWEKQEEPFKTIVDSFLPRL 232
BLAST of mRNA_M-pyrifera_M_contig9082.21050.1 vs. uniprot
Match: A0A6V2XVF7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2XVF7_HETAK) HSP 1 Score: 160 bits (404), Expect = 2.750e-44 Identity = 84/201 (41.79%), Postives = 131/201 (65.17%), Query Frame = 3 Query: 18 MSAEAPLDRAQFLAAS-AAVATSSAILPLIALAEDEETQSADAVKEVKLVTTKLGGQLEPFADVSKGYRLAKPLGWNRYDGTSGEYAVKMVDLIDPTTVILLTNSPVKSDTQLSTLGSLGQVGEKLSKGRDLEIIASRERITEGIRLYDYEFKGGGRRELKTLAVNKNKLWNLTMGCP-EKSWKKQEEVFKTLVDSFLPRL 614 M+AE + R + LAA+ AAVAT A +P++A AE E+ + A T+++GG ++P+ DV+KG++L +P GW+ + GEY VK VDL++ I ++ +PVKS T + LG +G VG KL+ R E++++ ++ITE IR Y +EFK G E+ L++NK +LW+L+ P EKSW K++E ++ + SFLPRL Sbjct: 38 MTAEGAMGRREVLAAATAAVAT--ATVPIVAFAEPEQVERA---------TSRMGGTMDPYNDVNKGFKLMRPGGWDAFSNAPGEYDVKFVDLVNKAETITVSTTPVKSSTSIDALGEVGAVGAKLAASRGAELLSANDKITENIRAYTFEFKKGSSYEIYQLSINKGRLWSLSCVAPSEKSWAKRKEAYRVVAGSFLPRL 227
BLAST of mRNA_M-pyrifera_M_contig9082.21050.1 vs. uniprot
Match: A0A7R9Y8Q4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8Q4_9STRA) HSP 1 Score: 135 bits (339), Expect = 1.100e-34 Identity = 66/161 (40.99%), Postives = 105/161 (65.22%), Query Frame = 3 Query: 129 QSADAVKEVKLVTTKLGGQLEPFADVSKGYRLAKPLGWNRYDGTSGEYAVKMVDLIDPTTVILLTNSPVKSDTQLSTLGSLGQVGEKLSKGRDLEIIASRERITEGIRLYDYEFKGGGRRELKTLAVNKNKLWNLTMGCPEKSWKKQEEVFKTLVDSFLPR 611 QSA AV+EV L ++LGG LEP++D+ +G+RL P WN+++ G Y V+ VDL++ +LL SPVKSD L +G+ ++GEKL+ R+ + +++ R TEG+ YD+EF+ E TLA+ +N+LWNL++ K+W K++ F + SF+P+ Sbjct: 64 QSA-AVEEVPLSKSRLGGVLEPYSDIQRGFRLMAPYSWNKFENGEG-YDVRWVDLVNVKENVLLRTSPVKSDASLEAIGTPEKIGEKLAASREAQCVSATARQTEGLLFYDFEFESKAAHEYATLAIARNRLWNLSVVTEPKNWSKRKASFDGIRKSFIPK 222
BLAST of mRNA_M-pyrifera_M_contig9082.21050.1 vs. uniprot
Match: A0A7S4BPW2_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BPW2_CHRCT) HSP 1 Score: 134 bits (337), Expect = 2.170e-34 Identity = 62/148 (41.89%), Postives = 98/148 (66.22%), Query Frame = 3 Query: 168 TKLGGQLEPFADVSKGYRLAKPLGWNRYDGTSGEYAVKMVDLIDPTTVILLTNSPVKSDTQLSTLGSLGQVGEKLSKGRDLEIIASRERITEGIRLYDYEFKGGGRRELKTLAVNKNKLWNLTMGCPEKSWKKQEEVFKTLVDSFLPR 611 +++GG LEPF DV KGY+L KP+ WN++D G Y VK D+I+P ++ +++SPV + T +S LG + VG K +K R+ E+I+++ER +G +Y +E KG E LAVN+ KL+ ++ K W K+EE+FK ++ SF+P+ Sbjct: 74 SRMGGALEPFIDVQKGYKLYKPVAWNQFDADPGVYDVKFQDVIEPFEIVQVSSSPVTTATSVSALGDVSAVGVKFAKSRNAELISAKERDADGSLVYTFELKGEMYHEYLALAVNRGKLFRVSTVTSNKRWPKREELFKNIILSFVPK 221
BLAST of mRNA_M-pyrifera_M_contig9082.21050.1 vs. uniprot
Match: A0A8J6C9Q6_DIALT (PsbP domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C9Q6_DIALT) HSP 1 Score: 130 bits (326), Expect = 1.090e-32 Identity = 73/193 (37.82%), Postives = 114/193 (59.07%), Query Frame = 3 Query: 36 LDRAQFLAASAAVATSSAILPLIALAEDEETQSADAVKEVKLVTTKLGGQLEPFADVSKGYRLAKPLGWNRYDGTSGEYAVKMVDLIDPTTVILLTNSPVKSDTQLSTLGSLGQVGEKLSKGRDLEIIASRERITEGIRLYDYEFKGGGRRELKTLAVNKNKLWNLTMGCPEKSWKKQEEVFKTLVDSFLPRL 614 +D ++ A SAA+A SA LPL+AL +AD V+E+ TT++GG L+ F+D+SKG+ + KP WN++DGT GEY K DLI T I++++SPV S + LGS ++G K++K RDL ++++ + +Y E G G E V+K KLW +T +K W +E++ ++ SF R+ Sbjct: 43 VDLSRRRAVSAALA--SAALPLVAL----PALAADGVREISPSTTRMGGLLDAFSDISKGFSVYKPSTWNKFDGTPGEYEAKWQDLIGYTEQIIVSSSPVTSGKGIDALGSASELGAKVAKLRDLTLVSAEAVKVGELLMYIVELAGQGGHEAIGFTVSKGKLWRITTKASDKKWAANKEMYMNVITSFQNRI 229
BLAST of mRNA_M-pyrifera_M_contig9082.21050.1 vs. uniprot
Match: A0A7S4JXM0_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4JXM0_9EUKA) HSP 1 Score: 128 bits (322), Expect = 3.090e-32 Identity = 60/147 (40.82%), Postives = 92/147 (62.59%), Query Frame = 3 Query: 168 TKLGGQLEPFADVSKGYRLAKPLGWNRYDGTSGEYAVKMVDLIDPTTVILLTNSPVKSDTQLSTLGSLGQVGEKLSKGRDLEIIASRERITEGIRLYDYEFKGGGRRELKTLAVNKNKLWNLTMGCPEKSWKKQEEVFKTLVDSFLP 608 ++LGG LEPF D+ KGY+L KP GW +Y G Y VK D+I+P +++++SPV + T +S LG L VG K +K R+ E++ + ER +G +Y E KG EL TL++N+ KL+ +T K W K+ E++ ++ SF+P Sbjct: 69 SRLGGLLEPFVDIQKGYKLYKPSGWTQYSIDPGVYDVKFADIIEPFESVIVSSSPVATATSISALGDLPTVGAKFAKSRNAELVKATERTADGNLVYTLELKGDVYHELLTLSINRGKLFRVTATATNKRWSKRSELYSNIMLSFVP 215
BLAST of mRNA_M-pyrifera_M_contig9082.21050.1 vs. uniprot
Match: A0A7S0NW19_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NW19_9EUKA) HSP 1 Score: 123 bits (308), Expect = 3.820e-30 Identity = 58/147 (39.46%), Postives = 90/147 (61.22%), Query Frame = 3 Query: 171 KLGGQLEPFADVSKGYRLAKPLGWNRYDGTSGEYAVKMVDLIDPTTVILLTNSPVKSDTQLSTLGSLGQVGEKLSKGRDLEIIASRERITEGIRLYDYEFKGGGRRELKTLAVNKNKLWNLTMGCPEKSWKKQEEVFKTLVDSFLPR 611 K+GG LEP+ DV KGY+L +P WN++D G Y VK D+I+ + +++SPV S T +S LG + V K +K R+ E+++S ER +G LY E +G E L +N+ KL+ L+ K W K++E++K +V SF+P+ Sbjct: 73 KMGGALEPYIDVQKGYKLYRPTAWNQFDTDPGVYDVKFQDVINSFETVQVSSSPVSSATSISALGDIASVAAKFAKSRNAELVSSSERDADGSLLYSMELQGDMYHEYLALTINRGKLFRLSTVTSNKRWSKRQELYKNVVLSFVPK 219
BLAST of mRNA_M-pyrifera_M_contig9082.21050.1 vs. uniprot
Match: A0A7S2FXS9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FXS9_9STRA) HSP 1 Score: 120 bits (302), Expect = 7.350e-30 Identity = 65/158 (41.14%), Postives = 96/158 (60.76%), Query Frame = 3 Query: 147 KEVKLVTTKLGGQLEPFADVSKGYRLAKPLGWNRYDGTSGEYAVKMVDLIDPTT-VILLTNSPVKSDT-QLSTLGSLGQVGEKLSKGRDLEIIASRERITEGIRLYDYEFKGGGRRELKTLAVNKNKLWNLTMGCPEKSWKKQEEVFKTLVDSFLPRL 614 +E + TK+GG LEP+ DV KG+R+ KP GWN++D G Y +K DL+ V+L+T +PVKS T + LG + +VG KL KG+ E+++++ EGI Y +EFK +L L VNK KLW++ P+K W K E++ + SF+P L Sbjct: 9 EETAVSRTKMGGLLEPYNDVGKGWRINKPSGWNQFDTLPGVYEMKWEDLVATNREVLLVTTTPVKSTTTSVDMLGDVTEVGRKLGKGKK-ELLSAKAVEKEGILFYMWEFKTEDGHQLLQLCVNKGKLWSVDASAPDKRWSKVSELYTNSLLSFMPTL 165
BLAST of mRNA_M-pyrifera_M_contig9082.21050.1 vs. uniprot
Match: A0A7S0W0N6_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W0N6_9CRYP) HSP 1 Score: 123 bits (308), Expect = 2.670e-29 Identity = 56/157 (35.67%), Postives = 99/157 (63.06%), Query Frame = 3 Query: 156 KLVTTKLGGQLEPFADVSKGYRLAKPLGWNRYDGTSGEYAVKMVDLIDPTTVILLTNSPVKSDTQLSTLGSLGQVGEKLSKGRDLEIIASRERITEGIRLYDYEFKGG----GRRELKTLAVNKNKLWNLTMGCPEKSWKKQEEVFKTLVDSFLPRL 614 K +++GG LEPF D++KG++L KP GWN++D GEY +K DL++ + ++++ V++ + LG + +G+KL+ + E++++ +R +GI Y + FK G G RE+ L VNK +LW++T EK W K+E+ + ++ SF+P+L Sbjct: 148 KTKASRMGGLLEPFKDINKGFQLLKPRGWNQFDAAPGEYDIKWEDLVEKSEMVMVGTKEVQTAKSVDALGDVEALGKKLAAKKKAELVSAEKREVDGILFYKFIFKQGNEKVGAREVYQLCVNKGRLWSVTATTSEKRWAKREKFYDNVMMSFVPKL 304
BLAST of mRNA_M-pyrifera_M_contig9082.21050.1 vs. uniprot
Match: A0A7S2FXI9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FXI9_9STRA) HSP 1 Score: 113 bits (283), Expect = 6.680e-27 Identity = 58/158 (36.71%), Postives = 95/158 (60.13%), Query Frame = 3 Query: 147 KEVKLVTTKLGGQLEPFADVSKGYRLAKPLGWNRYDGTSGEYAVKMVDLIDPT-TVILLTNSPVKSDT-QLSTLGSLGQVGEKLSKGRDLEIIASRERITEGIRLYDYEFKGGGRRELKTLAVNKNKLWNLTMGCPEKSWKKQEEVFKTLVDSFLPRL 614 +E+ + + GG LEP++D+++G+R+ KP WN++D G Y +K DL+ I+LT SPVKS T + LG + +VG KL+K RD ++++++ EGI Y ++ +G +L TL V K KLW + PE W K +++ + SF+P+L Sbjct: 26 EEIGVSKNRAGGLLEPYSDITRGWRILKPSTWNQFDQIPGTYDMKWEDLVSLNYQQIILTTSPVKSTTVSVDALGPVEEVGLKLAKTRDAKLLSAKAFTKEGILFYLFDLQGPAVHQLLTLCVFKGKLWKVDASAPETRWAKTGPLYEKVAASFMPKL 183 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9082.21050.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig9082.21050.1 >prot_M-pyrifera_M_contig9082.21050.1 ID=prot_M-pyrifera_M_contig9082.21050.1|Name=mRNA_M-pyrifera_M_contig9082.21050.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=200bp MSAEAPLDRAQFLAASAAVATSSAILPLIALAEDEETQSADAVKEVKLVTback to top mRNA from alignment at M-pyrifera_M_contig9082:2584..7583+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig9082.21050.1 ID=mRNA_M-pyrifera_M_contig9082.21050.1|Name=mRNA_M-pyrifera_M_contig9082.21050.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5000bp|location=Sequence derived from alignment at M-pyrifera_M_contig9082:2584..7583+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig9082:2584..7583+ >mRNA_M-pyrifera_M_contig9082.21050.1 ID=mRNA_M-pyrifera_M_contig9082.21050.1|Name=mRNA_M-pyrifera_M_contig9082.21050.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1200bp|location=Sequence derived from alignment at M-pyrifera_M_contig9082:2584..7583+ (Macrocystis pyrifera P11B4 male)back to top |