mRNA_M-pyrifera_M_contig907.21025.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig907.21025.1 vs. uniprot
Match: D8LTU9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTU9_ECTSI) HSP 1 Score: 394 bits (1012), Expect = 6.710e-114 Identity = 264/559 (47.23%), Postives = 312/559 (55.81%), Query Frame = 3 Query: 942 RPSRAMAANLGDVPAGLRGVWSRQGACLFSSWSASH-AKLSASCLPA-GTAGTAEVLSEGECVRAVRDLLDERAAAAAAALVACRRLGRCPLNSHVLIVGDHNDGGASETSYPGGLCPRDTKAEEASSNFLCPALGLDTVAVSLYRDFRRQYGLQRTAEERVAGLLGAVLENSPASAVLRLFARIVGTPANAAGRGRWPCQTSSEDAKQGLETQLARLVTSARDWLIVRGFMSTTGPWVGRIDGREGGGESG--TGWRRSIVSRTHAAMCSAAILKLGWGSGHQIMGAAEQAILDLPTVGGGFSGLTGRRGLEPWSELIDGEDFLEILLLVVIRAKELSRKADEELFGSKAVAGHQFLVAKPRDINAPASNGIPTITTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAN-SGGYRDTPATGADDGKTRTSNRAAAGK---NSSYDYAGDAEQKPPNT---FSYDGDFHDPKEEELTIFSGYENYSRDPEEEEEEQGKRTGKFRERAEQLGESGGVLKRLKPLLDSFIREDAQRTGTLPASDFRRITCEGHGGLWPDL 2585 RPSRA AANLG VPAGLRGVWSRQG+C+FSSWSASH A+ A LPA GT GTAEV+ EGECVR VR++LD RAAA AAL+ACRRLGRC +SH ++V +DG SE S G C + CPA ++T+ V+LYRDFRR+YGLQRTAEERVAGLLGAVLE+ PAS VLRLFAR+VG PA A+G GRWP QT SEDA GLE QL LVT+AR WLI RGFM+T GPW G + + +SG GWR +IV+RTHAAMC++A+L GWG+GHQIMGAAEQ +L+ ++ LFG +A+AGH FL+AK RDINA AS A SG Y T + D R +G N + D + E PN K T +FR R +LGE G VL+RLKPLLD+FI ED QRTGTLPA+DFRR+ CEGHGGLWP L Sbjct: 1333 RPSRATAANLGCVPAGLRGVWSRQGSCMFSSWSASHHAERPADQLPAEGTDGTAEVMGEGECVRLVREVLDGRAAAREAALMACRRLGRCAPDSHAIVV---DDGIYSENSR-GEKCDASACFDLEEDTSCCPASRVETLGVALYRDFRRRYGLQRTAEERVAGLLGAVLEHGPASPVLRLFARMVGAPAGASGEGRWPSQTPSEDANLGLEPQLVNLVTAARHWLITRGFMTTDGPWAGVGENGKTMRDSGFGIGWRTTIVARTHAAMCASALLTPGWGAGHQIMGAAEQ---------------------------------------------KLASTTNDGLFGRRAMAGHSFLLAKARDINAGASAAATEHEQDAAQVGRKTTTERSLESLLDTVSKSPPSLLAAPASGEYYRTRIASSGDNSGRGIKGVGSGDFRGNQAGDAHAEGEPVVPNQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKGT-RFRNRENELGEGGKVLQRLKPLLDNFILEDTQRTGTLPAADFRRVLCEGHGGLWPGL 1841
BLAST of mRNA_M-pyrifera_M_contig907.21025.1 vs. uniprot
Match: A0A6H5JZI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZI3_9PHAE) HSP 1 Score: 340 bits (873), Expect = 8.290e-96 Identity = 201/371 (54.18%), Postives = 242/371 (65.23%), Query Frame = 3 Query: 942 RPSRAMAANLGDVPAGLRGVWSRQGACLFSSWSASH-AKLSASCLPA-GTAGTAEVLSEGECVRAVRDLLDERAAAAAAALVACRRLGRCPLNSHVLIVGDHNDGGASETSYPGGLCPRDTKAEEASSNFLCPALGLDTVAVSLYRDFRRQYGLQRTAEERVAGLLGAVLENSPASAVLRLFARIVGTPANAAG-RGRWPCQTSSEDAKQGLETQLARLVTSARDWLIVRGFMSTTGPWVGRIDGREGGGESG--TGWRRSIVSRTHAAMCSAAILKLGWGSGHQIMGAAEQAILDLPTVGGGFSGLTGRRGLEPWSELIDGEDFLEILLLVVIRAKELSRKADEELFGSKAVAGHQFLVAKPRDINAPAS 2039 RPSRA AANLG VPAGLRGVWSRQG+C+F+SWSASH A+ A LPA GT GTAEV+ EGECVR VR++LD RAAA A+L+ACRRLGRC +SH ++VGD G S G C ++ CPA ++T+ V+LYRDFRR+YGLQR AEERVAGLLGAVLE+ AS VLRLFAR+VG PA A+G RGRWP QT SEDA GLE QL LVT+AR+WLI RGFM+ GPW G + + +SG GWR +IV+RTHAAMC++A+L GWG+GHQIMGAAEQ + + ++ LFG +AVAGH FL+AK RDIN+ AS Sbjct: 1525 RPSRATAANLGCVPAGLRGVWSRQGSCMFASWSASHHAERRADQLPAAGTDGTAEVMGEGECVRLVREVLDGRAAAREASLMACRRLGRCAPDSHTIVVGD----GIYSDSIRGEKCGATACFDQEEDGSCCPASRVETLGVALYRDFRRRYGLQRAAEERVAGLLGAVLEHGQASPVLRLFARMVGAPAGASGKRGRWPSQTPSEDANLGLEPQLVNLVTAARNWLITRGFMTADGPWAGVGENGKTMRDSGFGIGWRTTIVARTHAAMCASALLTPGWGAGHQIMGAAEQ---------------------------------------------KFASATNDGLFGRRAVAGHPFLLAKARDINSGAS 1846 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig907.21025.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig907.21025.1 >prot_M-pyrifera_M_contig907.21025.1 ID=prot_M-pyrifera_M_contig907.21025.1|Name=mRNA_M-pyrifera_M_contig907.21025.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=543bp MAANLGDVPAGLRGVWSRQGACLFSSWSASHAKLSASCLPAGTAGTAEVLback to top mRNA from alignment at M-pyrifera_M_contig907:1346..24960- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig907.21025.1 ID=mRNA_M-pyrifera_M_contig907.21025.1|Name=mRNA_M-pyrifera_M_contig907.21025.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=23615bp|location=Sequence derived from alignment at M-pyrifera_M_contig907:1346..24960- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig907:1346..24960- >mRNA_M-pyrifera_M_contig907.21025.1 ID=mRNA_M-pyrifera_M_contig907.21025.1|Name=mRNA_M-pyrifera_M_contig907.21025.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3258bp|location=Sequence derived from alignment at M-pyrifera_M_contig907:1346..24960- (Macrocystis pyrifera P11B4 male)back to top |