mRNA_M-pyrifera_M_contig9067.21022.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig9067.21022.1
Unique NamemRNA_M-pyrifera_M_contig9067.21022.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig9067.21022.1 vs. uniprot
Match: A0A6H5J8Z2_9PHAE (Lipase_3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J8Z2_9PHAE)

HSP 1 Score: 362 bits (929), Expect = 2.040e-120
Identity = 176/315 (55.87%), Postives = 217/315 (68.89%), Query Frame = 1
Query:    1 FDEHLARQIVNLTEAAYCADKLVDWDCKVCQNFPGMTNVTILQGKSRNVRGFVGIDAGVDRQPSTWTPPXXXXXXXXXXXRLRARDDRDDTTGPR----KTKVVITFSGTDPKSIKNWIDDLEAAPIAHVYGNACEECKVHRGFLAAYEIVQDQIRAAVAGHLQHNPAAEIMITGHSLGGALATLCFLDLEATLGV------KVSFAPLYIYGAPRVGNAAFAAYSASRGVPIFRVVHHRDPVPHLPFEAWGYVHPPREVFFDGPQESYVVCDESGEDATCSDQFWVMPGLAHVGDHLEYLEVDYTKAYLTCMLD 915
            +DE LA  IV LTEAAYC  +L  W CK CQ+FPGM NVT++ G+ RNVRGFVG+D G D + S                 LRA +  D   G      K ++VITFSGTDP S+KNWIDDLEA  + + YG  CE+C+VHRGFLAAY++V+DQ+R A+  H+Q+NP  +I+ITGHSLG ALA LCFLDL    G+       VSFAPLY++G+PRVGN AFA  +   GV IFR+VHHRDPVPHLP EAWGY HPP EVF+   Q SY VC++SGED TCS+QFW + G  ++ DHL YL V+Y+ AY+ C LD
Sbjct:   52 YDEGLASVIVRLTEAAYCTPQLASWSCKACQHFPGMRNVTVINGEKRNVRGFVGVDIG-DAEASNRYTSTPRGPGPDDRRHLRAAEGDDKGAGGAARSGKPRIVITFSGTDPSSVKNWIDDLEATTVPNTYGGLCEQCQVHRGFLAAYDLVKDQVRYAIGQHMQYNPHVQILITGHSLGAALAVLCFLDLRVNRGLGQGPNSSVSFAPLYLFGSPRVGNEAFATLTTRPGVSIFRLVHHRDPVPHLPLEAWGYHHPPTEVFYTEDQSSYQVCNKSGEDDTCSNQFWAIFG--NIEDHLWYLVVNYSTAYMQCQLD 363          
BLAST of mRNA_M-pyrifera_M_contig9067.21022.1 vs. uniprot
Match: A0A6B2LEG4_9EUKA (Lipase_3 domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LEG4_9EUKA)

HSP 1 Score: 184 bits (467), Expect = 5.570e-53
Identity = 102/271 (37.64%), Postives = 141/271 (52.03%), Query Frame = 1
Query:  100 PGMTNVTILQGKSRNVRGFVGIDAGVDRQPSTWTPPXXXXXXXXXXXRLRARDDRDDTTGPRKTKVVITFSGTDPKSIKNWIDDLEAAPIAHVYGNACEECKVHRGFLAAYEIVQDQIRAAVAGHLQHNPAAEIMITGHSLGGALATLCFLDLEATLGVKVSFAPLYIYGAPRVGNAAFAAYSASRGVPIFRVVHHRDPVPHLPFEAWGYVHPPREVFFDGPQESYVVCDES-GEDATCSDQFWVMPGLAHVGDHLEYLEVDYTKAYLTCM 909
            PG+  VT     + N  G+VG++                                     P    +++ F+GT+P SIKNWIDD++  P ++   +AC  C VH GF   Y  VQD++R      L   P   + +TGHSLG  LA L  LDL  T  V+VS   +Y +G PR+GN AF  Y  S    ++RV H  DPVPHLP EA+G+VH P+EVF++  Q SY +C  + GED +CSDQF +    A + DHL Y+  D+   YL+C+
Sbjct:    3 PGLQMVTAFHNDTTNANGYVGVN-------------------------------------PSAGYIIVAFTGTNPLSIKNWIDDIDTIPTSY---SACSGCAVHEGFYHTYLSVQDEVRNGFRSILLKYPNLPVQVTGHSLGAVLAELGALDLIQTFRVRVS--SMYHFGGPRLGNDAFTRYLLSSIGEVYRVTHWMDPVPHLPPEAFGFVHNPQEVFYNDDQSSYTLCSSTNGEDPSCSDQFVLD---ADIPDHLNYIGFDFVSNYLSCL 228          
BLAST of mRNA_M-pyrifera_M_contig9067.21022.1 vs. uniprot
Match: A0A7S3GUH3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GUH3_9STRA)

HSP 1 Score: 185 bits (470), Expect = 1.420e-52
Identity = 109/305 (35.74%), Postives = 156/305 (51.15%), Query Frame = 1
Query:   16 ARQIVNLTEAAYCAD------KLVDWDCKVCQNFPGMTNVTILQGKSRNVRGFVGIDAGVDRQPSTWTPPXXXXXXXXXXXRLRARDDRDDTTGPRKTKVVITFSGTDPKSIKNWIDDLEAAPIAHVYGNACEECKVHRGFLAAYEIVQDQIRAAVAGHLQHNPAAEIMITGHSLGGALATLCFLDLEATLGVKVSFAPLYIYGAPRVGNAAFAAYSASRGVPIFRVVHHRDPVPHLPFEAWGYVHPPREVFFDGPQESYVVCDESGEDATCSDQFWVMPGLAHVGDHLEYLEVDYTKAYLTCML 912
            A + + L  AAYC D       + DW CKVC NFP MT  +    K+ +  GFVG D   +                                     +++I+FSGTDP SI+NWIDDL+   + + Y   C++C+VH GF  +++ V+D ++  V+      P A + +TGHSLG A+A     +    +GV VS A  Y YG PRVG  +F  + AS     FRV H+RDPVPHL  E++ + H P EVF++   + + +C   GED TC+DQ+        V +HL YL+ D  + YL+C L
Sbjct:   39 AERYIKLAGAAYCTDPKLRKNSIDDWSCKVCANFPNMTAHSFKSSKN-DANGFVGYDGDAN-------------------------------------EIIISFSGTDPTSIRNWIDDLKFRKVKYPY---CDKCEVHDGFYHSFQSVEDDVKKFVSSFQAQYPTATLAVTGHSLGAAMAAHAVAEYTH-MGVTVSTA--YAYGMPRVGEDSFEQWYASVVPGTFRVNHNRDPVPHLAPESFDFHHMPYEVFYEDDYKQWKLCSFEGEDKTCADQY----KNTDVLNHLVYLDFDIVENYLSCAL 295          
BLAST of mRNA_M-pyrifera_M_contig9067.21022.1 vs. uniprot
Match: A0A7S3ASR7_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ASR7_9EUKA)

HSP 1 Score: 166 bits (420), Expect = 1.010e-45
Identity = 89/210 (42.38%), Postives = 122/210 (58.10%), Query Frame = 1
Query:  295 VVITFSGTDPKSIKNWIDDLEAAPIAHVYGNACEECKVHRGFLAAYEIVQDQIRAAVAGHLQHNPAAEIMITGHSLGGALATLCFLDLEATLGVKVS-FAPLYIYGAPRVGNAAFAAYSASR--GVPIFRVVHHRDPVPHLPFEAWGYVHPPREVFFDGPQE-SYVVCDESGEDATCSDQFWVMPGLAHVGDHLEYLEVDYTKAYLTCML 912
            +V+  +GTDP  I  WIDD++   + +    AC  CKVH+GF   Y+ V   +R  + G    +P A + +TGHSLG A+A    +DL    G        +Y YG PRVGN+ FA+++A     VP+FRV H +DPVPHLP EA G+ H PREV++ G  + ++ VCD SGED TCS+   V     ++ DHLEY+  D    YL C L
Sbjct:   48 LVVALTGTDPLKIAEWIDDIDTVSVQYP---ACAGCKVHQGFYENYKSVHADMRVLIDGFAAEHPRAPLWVTGHSLGAAVAYHAAVDLMQ--GAHAGRLRGVYTYGQPRVGNSNFASWTAQLLGAVPVFRVTHRQDPVPHLPLEAMGFAHVPREVYYAGASKGAHAVCDGSGEDPTCSNAHAVD---VNIVDHLEYVGFDMVSNYLFCKL 249          
BLAST of mRNA_M-pyrifera_M_contig9067.21022.1 vs. uniprot
Match: A0A7S2XH34_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XH34_9EUKA)

HSP 1 Score: 168 bits (426), Expect = 1.910e-45
Identity = 116/324 (35.80%), Postives = 162/324 (50.00%), Query Frame = 1
Query:    1 FDEHLARQIVNLTEAAYCADKLV----DWDCKVCQNFPGMTNVTILQGK---SRNVRGFVGIDAGVDRQPSTWTPPXXXXXXXXXXXRLRARDDRDDTTGPRKTKVVITFSGTDPKSIKNWIDDLE---AAPIAHVYGNACEECKVHRGFLAAYEIVQDQIRAAVAGHLQHNPAAEIMITGHSLGGALATLCFLDLEATLGVKVSFAPLYIYGAPRVGNAAFAAYSASRGV----PIFRVVHHRDPVPHLPFE----AWGYVHPPREVFF--DGPQESYVVCDESGEDATCSDQFWVMPGLAHVGDHLEYLEVDYTKAYLTCML 912
            ++E  ++++V +  AAYCA  L     +WDC VC+ FP + N +    K   + N +GFV  D    +  S                                  +V++FSGTDP  I+NWIDDL+     P  +V    C  CKV RGF   Y+ VQ  +R +VA + + +P A + ITGHSLGGALA    +DL   +G  ++   +Y +G PRVGN AFA +  S G+    P +RV H  DPVPHLP +      G+ H P EV++      E  VVCD SGED +CSD  +       + DHL Y+   + K Y+ C L
Sbjct:   68 YNETRSKRMVAMCGAAYCAGTLGHGVGNWDCDVCKQFPDV-NASEFDDKGVLATNGKGFVAFDPHDGKYGS----------------------------------IVVSFSGTDPLQIQNWIDDLDYFAMTPTDYVAAG-CSGCKVDRGFYYTYQAVQKHVRESVANYKKSHPKAALWITGHSLGGALAVHAAVDLRL-IGNDIT--GVYTFGQPRVGNKAFAQWF-SEGLGSSRPHYRVTHRFDPVPHLPMDNKGPIGGFFHVPTEVYYPKQHSDEGAVVCDGSGEDPSCSDSNFAD---ILITDHLFYVGFHFAKNYIGCKL 348          
BLAST of mRNA_M-pyrifera_M_contig9067.21022.1 vs. uniprot
Match: A0A4D9CWF0_9STRA (Lipase_3 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWF0_9STRA)

HSP 1 Score: 166 bits (419), Expect = 3.660e-45
Identity = 101/288 (35.07%), Postives = 137/288 (47.57%), Query Frame = 1
Query:   43 AAYCADKLVD-WDCKVCQNFPGMTNVTILQGKSRNVRGFVGIDAGVDRQPSTWTPPXXXXXXXXXXXRLRARDDRDDTTGPRKTKVVITFSGTDPKSIKNWIDDLEAAPIAHVYGNACEECKVHRGFLAAYEIVQDQIRAAVAGHLQHNPAAEIMITGHSLGGALATLCFLDLEATLGVKVSFAPLYIYGAPRVGN----------AAFAAYSASRGVPIFRVVHHRDPVPHLPFEAWGYVHPPREVFFDGPQESYVVCDESGEDATCSDQFWVMPGLAHVGDHLEYL 873
            A YC     + W C  C   P  T V  +     N  GFVG D                                     P +  VV++F+GTD  S+ NWIDDL+           C+ECKVH GFL  Y  ++ Q++  V   ++ +P A + +TGHSLG ALA LC +DL   L +      +  +G PRVGN          +  AA SAS  +  +R+VHHRDPVPHLP  ++G+ H P EVF+   +  Y +CD +GED  CSD + + P +    DHL YL
Sbjct:    8 AYYCRTSACEAWACSACSRHP-RTEVRRVYDNVHNGNGFVGWD-------------------------------------PVEGVVVVSFAGTDTSSVANWIDDLDEVKTPWPL-QGCQECKVHAGFLTTYSALRPQLQPLVEALVRDHPQAPVWVTGHSLGAALAVLCMVDL---LSLSYPVRAVVNFGQPRVGNQHVRDAGGFSSFVAAQSASLSLCFYRLVHHRDPVPHLPPASFGFHHSPFEVFYTKNETYYHICDATGEDKHCSDHYLIDPSIK---DHLNYL 250          
BLAST of mRNA_M-pyrifera_M_contig9067.21022.1 vs. uniprot
Match: A0A4D9D459_9STRA (Lipase_3 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D459_9STRA)

HSP 1 Score: 160 bits (405), Expect = 1.090e-43
Identity = 87/199 (43.72%), Postives = 119/199 (59.80%), Query Frame = 1
Query:  295 VVITFSGTDPKSIKNWIDDLEAAPIAHVYGNACEECKVHRGFLAAYEIVQDQIRAAVAGHLQHNPAAEIMITGHSLGGALATLCFLDLEATLGVKVSFAPLYIYGAPRVGNAAFAAYSASRG----VPIFRVVHHRDPVPHLPFEAWGYVHPPREVFFDGPQESYVVCDESGEDATCSDQFWVMPGLAHVGDHLEYLEV 879
            +V+ F+GT    I  W+ +L+       Y + CE C+VH GF  AY  ++ Q+R  V   LQ +P A I +TGHSLG A+A  C +DL   + +  +   +  +G PRVGN  FA + AS       P++R+VH+RDPVPHLP  A+G+ H P EVF++  Q SY+VC++SGED  CSDQF V      V DHL YL V
Sbjct:   40 LVVAFAGTSMDDIVEWMANLDFKKEDFPY-DGCEGCQVHTGFYTAYLELRSQVREFVQYFLQQHPDAPIWVTGHSLGAAIAVHCMVDL---MSLSYNVRRVVNFGQPRVGNKQFATFVASLAESLDFPLYRLVHNRDPVPHLPPRAFGFHHQPFEVFYNEDQTSYIVCNDSGEDPQCSDQFLVD---LDVADHLNYLGV 231          
BLAST of mRNA_M-pyrifera_M_contig9067.21022.1 vs. uniprot
Match: F2U8A9_SALR5 (Lipase_3 domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U8A9_SALR5)

HSP 1 Score: 160 bits (404), Expect = 1.550e-42
Identity = 108/301 (35.88%), Postives = 147/301 (48.84%), Query Frame = 1
Query:    1 FDEHLARQIVNLTEAAYCADKLV-DWDCKVCQN--FPGMTNVTILQGKSRNVRGFVGIDAGVDRQPSTWTPPXXXXXXXXXXXRLRARDDRDDTTGPRKTKVVITFSGTDPKSIKNWIDDLEAAPIAHVYGNACEECKVHRGFLAAYEIVQDQIRAAVAGHLQHNPAAEIMITGHSLGGALATLCFLDLEATLGVKVSFAPLYIY--GAPRVGNAAFAAYSASRGVPI-FRVVHHRDPVPHLPFEAWGYVHPPREVF----FDGPQESYVVCDESGEDATCSDQFWVMPGLAHVGDHLEYL 873
            FD  ++ + V  + AAYC++  V DW CK C     P ++++ +   K  +  G+VG+D+ V++                                     +V+ F GT   ++K WIDDL+       Y  A  + KVHRGF  AY+ V+  +   V    + NP   I++TGHSLG ALA +C LDL     ++   A +Y Y  G PRVGNA F  +     +   FR VH+RD VPHLP EA G+ H   EVF    F GP ES   C+ SGED  CSDQF V      + DHL YL
Sbjct:   57 FDYEISLRGVQYSAAAYCSNSTVKDWSCKPCHGAGLPALSDINVFYAKKTSTYGYVGLDS-VNKY------------------------------------IVVAFQGT--HNLKQWIDDLKFMKTDLHYPGAGSDVKVHRGFYEAYQEVKGTVDRFVESTFRQNPNYRILVTGHSLGAALAAMCSLDLS----IQFPSASIYHYTFGQPRVGNAPFYDFFKQSSIKASFRFVHNRDIVPHLPLEAMGFHHIATEVFYKEQFSGP-ESLHECNGSGEDPDCSDQFNVD---ISISDHLNYL 310          
BLAST of mRNA_M-pyrifera_M_contig9067.21022.1 vs. uniprot
Match: W7U0K9_9STRA (Lipase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0K9_9STRA)

HSP 1 Score: 161 bits (407), Expect = 7.060e-41
Identity = 87/199 (43.72%), Postives = 119/199 (59.80%), Query Frame = 1
Query:  295 VVITFSGTDPKSIKNWIDDLEAAPIAHVYGNACEECKVHRGFLAAYEIVQDQIRAAVAGHLQHNPAAEIMITGHSLGGALATLCFLDLEATLGVKVSFAPLYIYGAPRVGNAAFAAYSASRG----VPIFRVVHHRDPVPHLPFEAWGYVHPPREVFFDGPQESYVVCDESGEDATCSDQFWVMPGLAHVGDHLEYLEV 879
            +V+ F+GT    I  W+ +L+       + + CE C+VH GF  AY  ++ Q+R  V   LQ +P A I +TGHSLG A+A  C +DL   + +  +   +  +G PRVGN  FA + AS       P++R+VHHRDPVPHLP  A+G+ H P EVF++  Q SY+VC++SGED  CSDQF V      V DHL YL V
Sbjct:  384 LVVAFAGTSMDDIVEWMANLDFKKEDFPH-DGCEGCQVHTGFYTAYLELRSQVREFVQYFLQQHPDAPIWVTGHSLGAAIAVHCMVDL---MSLSYNVRRVVNFGQPRVGNKQFATFVASLAESLDFPLYRLVHHRDPVPHLPPRAFGFHHQPFEVFYNEDQTSYIVCNDSGEDLQCSDQFLVD---LDVADHLNYLGV 575          
BLAST of mRNA_M-pyrifera_M_contig9067.21022.1 vs. uniprot
Match: A9V5U1_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V5U1_MONBE)

HSP 1 Score: 154 bits (389), Expect = 8.200e-41
Identity = 103/298 (34.56%), Postives = 137/298 (45.97%), Query Frame = 1
Query:    1 FDEHLARQIVNLTEAAYCADKLVD-WDCKVCQNFPGMTNVT-ILQGKSRNVRGFVGIDAGVDRQPSTWTPPXXXXXXXXXXXRLRARDDRDDTTGPRKTKVVITFSGTDPKSIKNWIDDLEAAPIAHVYGNACEECKVHRGFLAAYEIVQDQIRAAVAGHLQHNPAAEIMITGHSLGGALATLCFLDLEATLGVKVSFAPLYIYGAPRVGNAAFAAYSASRGVPI-FRVVHHRDPVPHLPFEAWGYVHPPREVF----FDGPQESYVVCDESGEDATCSDQFWVMPGLAHVGDHLEYL 873
            FD ++A   VNL+ AAYC   ++  W C  C       +V  +      +  G++GID    R                                     +++ F GT    +  WIDDL+       Y  A  + KVH GF  AY  V+  +   V   L +NP   I++TGHSLG ALA +C LDL   +G   +    Y YG PRVGN AFA +  S  +   +R+ H+ DPVPHLP E+ G+ H   EV+    F+G Q S  VCD SGED  CS+Q W       V DHL YL
Sbjct:   14 FDYNIALGSVNLSAAAYCDPSVIKAWSCPPCVGTGLALDVKDVFHASETDTNGYIGIDEAGKR-------------------------------------IIVAFQGT--HDLTQWIDDLDFFKADLQYPGASSDVKVHSGFYKAYRQVKQNVDQVVNQTLFNNPEYTILVTGHSLGAALAAMCSLDLS--IGHPQARILHYTYGQPRVGNQAFAQFYESHNLAQHYRMTHNEDPVPHLPLESMGFYHISTEVYYGEKFEG-QSSLKVCDGSGEDPNCSNQHWTD---LKVSDHLNYL 266          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9067.21022.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J8Z2_9PHAE2.040e-12055.87Lipase_3 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6B2LEG4_9EUKA5.570e-5337.64Lipase_3 domain-containing protein n=1 Tax=Arcella... [more]
A0A7S3GUH3_9STRA1.420e-5235.74Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S3ASR7_9EUKA1.010e-4542.38Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S2XH34_9EUKA1.910e-4535.80Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A4D9CWF0_9STRA3.660e-4535.07Lipase_3 domain-containing protein n=3 Tax=Monodop... [more]
A0A4D9D459_9STRA1.090e-4343.72Lipase_3 domain-containing protein n=1 Tax=Nannoch... [more]
F2U8A9_SALR51.550e-4235.88Lipase_3 domain-containing protein n=1 Tax=Salping... [more]
W7U0K9_9STRA7.060e-4143.72Lipase n=1 Tax=Nannochloropsis gaditana TaxID=7252... [more]
A9V5U1_MONBE8.200e-4134.56Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9067contigM-pyrifera_M_contig9067:289..2773 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score315.5
Seed ortholog evalue2.7e-83
Seed eggNOG ortholog2880.D8LBM6
Hectar predicted targeting categoryother localisation
EggNOG free text desc.phospholipase A1 activity
EggNOG OGsKOG4569@1,KOG4569@2759
Ec32 ortholog descriptionLipase domain protein
Ec32 orthologEc-27_003400.1
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1114
Cds size894
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9067.21022.1prot_M-pyrifera_M_contig9067.21022.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig9067 394..2658 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816818.6415992-UTR-M-pyrifera_M_contig9067:288..3931622816818.6415992-UTR-M-pyrifera_M_contig9067:288..393Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig9067 289..393 +
1692278196.5724883-UTR-M-pyrifera_M_contig9067:288..3931692278196.5724883-UTR-M-pyrifera_M_contig9067:288..393Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig9067 289..393 +
1622816818.7191575-UTR-M-pyrifera_M_contig9067:2658..27731622816818.7191575-UTR-M-pyrifera_M_contig9067:2658..2773Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig9067 2659..2773 +
1692278196.6253953-UTR-M-pyrifera_M_contig9067:2658..27731692278196.6253953-UTR-M-pyrifera_M_contig9067:2658..2773Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig9067 2659..2773 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816818.6521957-CDS-M-pyrifera_M_contig9067:393..4711622816818.6521957-CDS-M-pyrifera_M_contig9067:393..471Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9067 394..471 +
1692278196.5876794-CDS-M-pyrifera_M_contig9067:393..4711692278196.5876794-CDS-M-pyrifera_M_contig9067:393..471Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9067 394..471 +
1622816818.666419-CDS-M-pyrifera_M_contig9067:580..6301622816818.666419-CDS-M-pyrifera_M_contig9067:580..630Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9067 581..630 +
1692278196.5987182-CDS-M-pyrifera_M_contig9067:580..6301692278196.5987182-CDS-M-pyrifera_M_contig9067:580..630Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9067 581..630 +
1622816818.6864707-CDS-M-pyrifera_M_contig9067:650..8671622816818.6864707-CDS-M-pyrifera_M_contig9067:650..867Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9067 651..867 +
1692278196.6074173-CDS-M-pyrifera_M_contig9067:650..8671692278196.6074173-CDS-M-pyrifera_M_contig9067:650..867Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9067 651..867 +
1622816818.7003162-CDS-M-pyrifera_M_contig9067:2109..26581622816818.7003162-CDS-M-pyrifera_M_contig9067:2109..2658Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9067 2110..2658 +
1692278196.6164267-CDS-M-pyrifera_M_contig9067:2109..26581692278196.6164267-CDS-M-pyrifera_M_contig9067:2109..2658Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9067 2110..2658 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig9067.21022.1

>prot_M-pyrifera_M_contig9067.21022.1 ID=prot_M-pyrifera_M_contig9067.21022.1|Name=mRNA_M-pyrifera_M_contig9067.21022.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=298bp
MTNVTILQGKSRNVRGFVGIDAGVDRQPSTWTPPPPPPRPASGRRRLRAR
DDRDDTTGPRKTKVVITFSGTDPKSIKNWIDDLEAAPIAHVYGNACEECK
VHRGFLAAYEIVQDQIRAAVAGHLQHNPAAEIMITGHSLGGALATLCFLD
LEATLGVKVSFAPLYIYGAPRVGNAAFAAYSASRGVPIFRVVHHRDPVPH
LPFEAWGYVHPPREVFFDGPQESYVVCDESGEDATCSDQFWVMPGLAHVG
DHLEYLEVDYTKAYLTCMLDEGDEEEEDETYEAAAATDTVAVAVATS*
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mRNA from alignment at M-pyrifera_M_contig9067:289..2773+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig9067.21022.1 ID=mRNA_M-pyrifera_M_contig9067.21022.1|Name=mRNA_M-pyrifera_M_contig9067.21022.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2485bp|location=Sequence derived from alignment at M-pyrifera_M_contig9067:289..2773+ (Macrocystis pyrifera P11B4 male)
TTCGATGAACACCTCGCACGCCAGATCGTCAACTTGACCGAGGCAGCCTA CTGCGCGGACAAGCTGGTCGACTGGGACTGCAAGGTGTGCCAGAACTTCC CGGGGATGACCAACGTCACGATCCTTCAAGGGAAATCACGGAACGTTCGA GGTTTCGTCGGGATCGATGCCGGCGTTGATCGCGTTGGCGTTGGACGAGG AGATGAACTCCGGAATAGAGCGGCGCTATGGGATTTTTTGGGGCCGGACG GCAGTAGTACCAGCAGCAGCAGCAGGAGTGAAACACTACAAGCAGCCGTC GACGTGGACGCCGCCTCCGCCGCCGCCGCGGCCAGCCTCGGGGTGACGGC CGTCACCACTAGACGACGACGTCTCCGAGCTAGAGACGACAGAGACGACA CAACGGGTCCGAGGAAAACGAAGGTTGTGATCACGTTTTCGGGGACGGAC CCGAAGAGCATAAAAAATTGGATCGATGACTTGGAGGCGGCTCCAATCGC TCATGTCTACGGGAACGCGTGCGAGGAATGCAAGGTGCACCGAGGTTTCT TGGCTGCCTACGAGATCGTACAGGACCAGGTGGGTGGCTGTTTGGTGAAG GGTGGACCGAGGTGTGCTTGGGGCGGGTACGTAGGGGCAAGCCCTCACGT AGAAAAACTGCTCGTGGAGGCTTCCGTTTTCTACACTTTTTAGCAATTGT TCTGACATTTTCGTCGGACGAGTACGAGACGAGTGAGGAGTACTGCTGCT GTTCGGACTTGAGTTGAACTTCAACTTCTACACAATACTGCTGCTCTACG AGTAGCGCAATTATTTTACTGGTGCTGCTGTGACTGCTGAGTCCAGTTTT TAGAGCTGTGTGTCGGCAAGATCTCACCACTAATATCTCTTCGGTACGTG CCGTTAGTCAACTAACTGACTTTAGTAGGCAAGTCGACTGGCGAAGCCCG CTGATAGCCCGGCCGACTTGCCGACTTAGTCGGACCAATAGGTCGGATAG TCTGCACCTCCGGCATACGACCAACTCTTATTCCAACACATAATTGCTGT GGTTTGTGACTCAAGTCTTTCCGACCCACCGCTCTAGGGCGCCAGCGAAG CCCCCTTGTATGCTGATCAAGATCCCCATACTGATTGCACGGCGTGGATG GAAACAGGATCATTAGTGAGTAGTGAATTCATGATATAGATCGTTACACA CCATTCATGAGTTCGTAGGACCTGTATACCACCGTAGTGATAATAGTGGA AGAACACCGCGAATGACCGACCGCTCGGCGTGCGCAGTTGGGGATCGACC ACTTCTATTATGCTCACTGCTGACGTACGTGTTCGTAACGCATGATCACG AAAAATGTGTGTCCGCATCAGAGGGCCATGGGTGATGGAGAAGAACAGGT CGAAATCTTTCTGTAGAAAATGACTAATTAATGGATAGACCGTGCGTCAA GCCAACGCTTGATTGGCGCGCGCACGCGCGGTTCCCCAGCGCGGGGGCAT AGGACATGTGTGTATATTATGTTTCGCTTTTTGCACGCACGATGTTCGGA CAGCCTCAGTAGTACACCCAGCGTGTCTTGTCCCCTGTACCGGTGATATC TAAGGCTTCACGTGTCGAGCTCTTTTTTTTCAGCGGCTCGAAGCGAACGC ACGTGCGTTTCATCGAATACCTTGCGAAACATATACTGTACGTTTAAGTT TATGTTGCATGCTATCTCTCCGAGAGTATACAATTGGTGTCCCGCACGTA AAACGGAACCGCCCCTTGCTCTTATGCTTTCCCGGTCTCCCCACCCCAAT GCCCCTTCCGGTCGATTGCAGATAAGGGCCGCGGTTGCCGGCCACCTTCA GCACAACCCCGCCGCAGAAATTATGATCACGGGCCACTCCTTGGGGGGCG CGCTCGCCACGCTTTGTTTCTTAGACCTCGAAGCGACGCTGGGCGTGAAG GTTTCTTTCGCCCCCCTCTACATCTACGGCGCCCCGCGGGTGGGTAACGC GGCGTTTGCGGCGTACTCGGCCTCGCGCGGGGTCCCCATCTTCAGGGTGG TGCACCACCGCGATCCGGTCCCCCACCTTCCGTTCGAAGCCTGGGGCTAC GTCCACCCTCCGCGCGAAGTGTTTTTCGACGGCCCTCAGGAGAGTTACGT GGTGTGCGACGAGAGCGGGGAGGATGCGACGTGCTCGGACCAGTTCTGGG TGATGCCGGGGTTGGCCCACGTGGGCGATCACTTGGAATACCTGGAGGTG GACTACACGAAGGCATATCTGACATGCATGTTAGACGAAGGGGATGAGGA AGAGGAGGATGAGACGTACGAAGCCGCTGCGGCTACGGACACCGTGGCGG TGGCGGTGGCAACAAGTTGAATACCAGTATATATACCCATATATACCTGG TATGTCTATTGCGGTTTTTGTATCCACGCGCTTCTTTAGCCTCCTCGTGG CGGACCGGGTCATATCGCGCCACCGCTCTTCCGTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig9067:289..2773+

>mRNA_M-pyrifera_M_contig9067.21022.1 ID=mRNA_M-pyrifera_M_contig9067.21022.1|Name=mRNA_M-pyrifera_M_contig9067.21022.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1788bp|location=Sequence derived from alignment at M-pyrifera_M_contig9067:289..2773+ (Macrocystis pyrifera P11B4 male)
ATGACCAACGTCACGATCCTTCAAGGGAAATCACGGAACGTTCGAGGTTT
CGTCGGGATCGATGCCGGCGTTGATCGCATGACCAACGTCACGATCCTTC
AAGGGAAATCACGGAACGTTCGAGGTTTCGTCGGGATCGATGCCGGCGTT
GATCGCCAGCCGTCGACGTGGACGCCGCCTCCGCCGCCGCCGCGGCCAGC
CTCGGGCAGCCGTCGACGTGGACGCCGCCTCCGCCGCCGCCGCGGCCAGC
CTCGGGACGACGACGTCTCCGAGCTAGAGACGACAGAGACGACACAACGG
GTCCGAGGAAAACGAAGGTTGTGATCACGTTTTCGGGGACGGACCCGAAG
AGCATAAAAAATTGGATCGATGACTTGGAGGCGGCTCCAATCGCTCATGT
CTACGGGAACGCGTGCGAGGAATGCAAGGTGCACCGAGGTTTCTTGGCTG
CCTACGAGATCGTACAGGACCAGACGACGACGTCTCCGAGCTAGAGACGA
CAGAGACGACACAACGGGTCCGAGGAAAACGAAGGTTGTGATCACGTTTT
CGGGGACGGACCCGAAGAGCATAAAAAATTGGATCGATGACTTGGAGGCG
GCTCCAATCGCTCATGTCTACGGGAACGCGTGCGAGGAATGCAAGGTGCA
CCGAGGTTTCTTGGCTGCCTACGAGATCGTACAGGACCAGATAAGGGCCG
CGGTTGCCGGCCACCTTCAGCACAACCCCGCCGCAGAAATTATGATCACG
GGCCACTCCTTGGGGGGCGCGCTCGCCACGCTTTGTTTCTTAGACCTCGA
AGCGACGCTGGGCGTGAAGGTTTCTTTCGCCCCCCTCTACATCTACGGCG
CCCCGCGGGTGGGTAACGCGGCGTTTGCGGCGTACTCGGCCTCGCGCGGG
GTCCCCATCTTCAGGGTGGTGCACCACCGCGATCCGGTCCCCCACCTTCC
GTTCGAAGCCTGGGGCTACGTCCACCCTCCGCGCGAAGTGTTTTTCGACG
GCCCTCAGGAGAGTTACGTGGTGTGCGACGAGAGCGGGGAGGATGCGACG
TGCTCGGACCAGTTCTGGGTGATGCCGGGGTTGGCCCACGTGGGCGATCA
CTTGGAATACCTGGAGGTGGACTACACGAAGGCATATCTGACATGCATGT
TAGACGAAGGGGATGAGGAAGAGGAGGATGAGACGTACGAAGCCGCTGCG
GCTACGGACACCGTGGCGGTGGCGGTGGCAACAAGTTGAATAAGGGCCGC
GGTTGCCGGCCACCTTCAGCACAACCCCGCCGCAGAAATTATGATCACGG
GCCACTCCTTGGGGGGCGCGCTCGCCACGCTTTGTTTCTTAGACCTCGAA
GCGACGCTGGGCGTGAAGGTTTCTTTCGCCCCCCTCTACATCTACGGCGC
CCCGCGGGTGGGTAACGCGGCGTTTGCGGCGTACTCGGCCTCGCGCGGGG
TCCCCATCTTCAGGGTGGTGCACCACCGCGATCCGGTCCCCCACCTTCCG
TTCGAAGCCTGGGGCTACGTCCACCCTCCGCGCGAAGTGTTTTTCGACGG
CCCTCAGGAGAGTTACGTGGTGTGCGACGAGAGCGGGGAGGATGCGACGT
GCTCGGACCAGTTCTGGGTGATGCCGGGGTTGGCCCACGTGGGCGATCAC
TTGGAATACCTGGAGGTGGACTACACGAAGGCATATCTGACATGCATGTT
AGACGAAGGGGATGAGGAAGAGGAGGATGAGACGTACGAAGCCGCTGCGG
CTACGGACACCGTGGCGGTGGCGGTGGCAACAAGTTGA
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