mRNA_M-pyrifera_M_contig90645.21013.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90645.21013.1
Unique NamemRNA_M-pyrifera_M_contig90645.21013.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig90645.21013.1 vs. uniprot
Match: A0A3D1GD62_9BACT (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A3D1GD62_9BACT)

HSP 1 Score: 343 bits (879), Expect = 8.200e-114
Identity = 191/262 (72.90%), Postives = 217/262 (82.82%), Query Frame = 1
Query:    1 SRFNRTKQLADKDLSSDLEIEQLQAQLISAEAXXXXXXXXVSQSESLVKERKEALRRTTITAPISGTIGQRNAQVGMQVNQNTQLFLIGDLTKLRVEIVLTESMLNRISIGQNAEILVMDYEGNEQIIMAKLSRISPFLNEITRSTEAEIDVENTNGWLKPGMFVPVDINFGESQQATLIPVSALFTDPTSGAQGVFVASSLGAEIQPASDETNEEDELSHLTEPTSVTFKPINVIARGRMEVGVGELQSGDWVVTIGQDLL 786
            +R+NR K+LA+++LSSD E+EQ++        XXXXXXXX      LV ERKE L RT ITAPISGTIGQRNAQVGMQVN  TQLFLIGDL+KLRVEIVLTE MLN+ISIGQ+A I V DYEGN++ I AKLSRISPFLNE+TRSTEAEIDV N NGWLKPGMFVPVDI+FGES+QATLIPVSA+FTDPTSG  GVF+ASS+G EIQP +D+ +  D    LTEPT V F PINVIARGRMEVGVG L+SGDWV+T+GQDLL
Sbjct:  135 ARYNRLKKLAEQELSSDAELEQIEXXXXXXXXXXXXXXXXXXXXXXLVNERKENLNRTIITAPISGTIGQRNAQVGMQVNTGTQLFLIGDLSKLRVEIVLTEEMLNKISIGQSATIHVADYEGNDREISAKLSRISPFLNEVTRSTEAEIDVNNENGWLKPGMFVPVDIHFGESEQATLIPVSAIFTDPTSGEDGVFIASSIGTEIQPVADDNS--DSPQALTEPTPVKFIPINVIARGRMEVGVGGLESGDWVITLGQDLL 394          
BLAST of mRNA_M-pyrifera_M_contig90645.21013.1 vs. uniprot
Match: A0A521C419_9BACT (RND family efflux transporter, MFP subunit n=1 Tax=Gracilimonas mengyeensis TaxID=1302730 RepID=A0A521C419_9BACT)

HSP 1 Score: 307 bits (787), Expect = 7.020e-100
Identity = 172/264 (65.15%), Postives = 208/264 (78.79%), Query Frame = 1
Query:    1 SRFNRTKQLADKDLSSDLEIEQLQAQLISAEAXXXXXXXXVSQSESLVKERKEALRRTTITAPISGTIGQRNAQVGMQVNQNTQLFLIGDLTKLRVEIVLTESMLNRISIGQNAEILVMDYEGNEQIIMAKLSRISPFLNEITRSTEAEIDVENTNGWLKPGMFVPVDINFGESQQATLIPVSALFTDPTSGAQGVFVASSLGAEIQPASD--ETNEEDELSHLTEPTSVTFKPINVIARGRMEVGVGELQSGDWVVTIGQDLL 786
            S++ R KQL+D++LSSDLE+EQ++A       XXXXXXXX           +E L RT + APISGT+GQRNA++GMQ + NTQLFLIGDL +LRVEIVLTE+MLNRI +GQ AEILV D  G +Q I A+LSRISPFLN+ TRSTEAEIDV N +G L+PGMFVPVDI FGES+QATLIP SA++TDPTSG +G++VASSLG+EIQPA+D  +++     S LTEPT V FKPINV+A GRMEVGV  L+SG WVVT+GQDLL
Sbjct:  135 SQYRRIKQLSDRELSSDLELEQIEAXXXXXXXXXXXXXXXXXXXXXXXXXXQEQLDRTVVRAPISGTVGQRNAEIGMQASPNTQLFLIGDLDRLRVEIVLTETMLNRIQVGQRAEILVEDASGEQQTIQAELSRISPFLNQQTRSTEAEIDVSNNSGLLRPGMFVPVDIYFGESEQATLIPTSAIYTDPTSGQEGIYVASSLGSEIQPANDPGDSSNTGSSSTLTEPTPVQFKPINVVAEGRMEVGVRGLESGQWVVTVGQDLL 398          
BLAST of mRNA_M-pyrifera_M_contig90645.21013.1 vs. uniprot
Match: A0A1B6Y6F2_9BACT (HlyD_D23 domain-containing protein n=2 Tax=Balneola sp. EhC07 TaxID=1849360 RepID=A0A1B6Y6F2_9BACT)

HSP 1 Score: 298 bits (764), Expect = 1.070e-96
Identity = 158/260 (60.77%), Postives = 200/260 (76.92%), Query Frame = 1
Query:    7 FNRTKQLADKDLSSDLEIEQLQAQLISAEAXXXXXXXXVSQSESLVKERKEALRRTTITAPISGTIGQRNAQVGMQVNQNTQLFLIGDLTKLRVEIVLTESMLNRISIGQNAEILVMDYEGNEQIIMAKLSRISPFLNEITRSTEAEIDVENTNGWLKPGMFVPVDINFGESQQATLIPVSALFTDPTSGAQGVFVASSLGAEIQPASDETNEEDELSHLTEPTSVTFKPINVIARGRMEVGVGELQSGDWVVTIGQDLL 786
            + R + LA+KDLSS+LE+EQ+ A+ ISAEA        V QS +LV ERK  L +T I AP++GTIGQRNAQ GMQ + +T LF+IGDL+KLRVEI+LTESMLN+I +GQ A I V D  G    I  +LSRISPFLNEITRSTEAEID++N NG L PGM+VPVDI +GESQQATLIP SA+F DP +G++G+++A+S+G+EI+P SD  +    +S LT PT VTF+ I+VIARG+MEV V  L+SG WVVT+GQ+LL
Sbjct:  119 YKRIQALAEKDLSSELELEQINAEKISAEADVELAEAQVEQSAALVDERKNQLTKTLIKAPVTGTIGQRNAQPGMQASASTPLFMIGDLSKLRVEILLTESMLNKIKVGQTAAISVTDQNGEIVTISGELSRISPFLNEITRSTEAEIDIDNQNGLLNPGMYVPVDIFYGESQQATLIPTSAIFIDPNTGSEGIYIANSIGSEIKPVSDSASG---VSSLTSPTDVTFQEIDVIARGKMEVAVNGLESGKWVVTLGQNLL 375          
BLAST of mRNA_M-pyrifera_M_contig90645.21013.1 vs. uniprot
Match: A0A2D8CHK9_9BACT (Efflux transporter periplasmic adaptor subunit n=2 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D8CHK9_9BACT)

HSP 1 Score: 288 bits (738), Expect = 1.830e-92
Identity = 164/257 (63.81%), Postives = 198/257 (77.04%), Query Frame = 1
Query:   19 KQLADKDLSSDLEIEQLQAQLISAEAXXXXXXXXVSQSESLVKERKEALRRTTITAPISGTIGQRNAQVGMQVNQNTQLFLIGDLTKLRVEIVLTESMLNRISIGQNAEILVMDYEGNEQIIMAKLSRISPFLNEITRSTEAEIDVENTNGWLKPGMFVPVDINFGESQQATLIPVSALFTDPTSGAQGVFVASSLGAEIQPASDETNEEDELSH-LTEPTSVTFKPINVIARGRMEVGVGELQSGDWVVTIGQDLL 786
            KQL +KDL+SD+              XXXXXXXX         ER++ L +  I APISGT+GQRNA++GMQ N  TQLFLIGDLTKL+VEI+LTE+MLN+I +GQ+A I+V + +G +  I AKLSRISPFLNEITRSTEAEIDV+N NG L+PGMFVPVDI FGESQQATLIPVSAL+TDPTSG QGVF+ASSLG+EI+P SD +N        +TEPT V FKP++VIA+GRME+GV  L+SG W+VT+GQDLL
Sbjct:  143 KQLEEKDLTSDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERRDELDKAVIRAPISGTVGQRNAEIGMQANTGTQLFLIGDLTKLKVEIILTENMLNKIQVGQSARIIVENGDGQKVPINAKLSRISPFLNEITRSTEAEIDVDNVNGLLRPGMFVPVDIFFGESQQATLIPVSALYTDPTSGEQGVFIASSLGSEIKPVSDTSNNGAVRPRSMTEPTPVQFKPVDVIAQGRMELGVNGLESGQWIVTVGQDLL 399          
BLAST of mRNA_M-pyrifera_M_contig90645.21013.1 vs. uniprot
Match: UPI000CD8C5DD (efflux RND transporter periplasmic adaptor subunit n=1 Tax=Gracilimonas amylolytica TaxID=1749045 RepID=UPI000CD8C5DD)

HSP 1 Score: 271 bits (694), Expect = 7.290e-86
Identity = 149/257 (57.98%), Postives = 198/257 (77.04%), Query Frame = 1
Query:   19 KQLADKDLSSDLEIEQLQAQLISAEAXXXXXXXXVSQSESLVKERKEALRRTTITAPISGTIGQRNAQVGMQVNQNTQLFLIGDLTKLRVEIVLTESMLNRISIGQNAEILVMDYEGNEQIIMAKLSRISPFLNEITRSTEAEIDVENTNGWLKPGMFVPVDINFGESQQATLIPVSALFTDPTSGAQGVFVASSLGAEIQPASDET-NEEDELSHLTEPTSVTFKPINVIARGRMEVGVGELQSGDWVVTIGQDLL 786
            KQL  KDL+S  E++           XXXXXX    QS S+V++R+E L +  I APISGT+GQRNA++GMQ N +TQLFLIGDLT+L+VEIVLTE ML++I++GQ A ++V + +G +  + A++SRISPFLNE+TRST+AEIDV N +G L+PGMFVPVDI FGES+QATLIP+SALFT+  +G  GV++ASSLG+EI+P SD + N  +  + ++ PT V F PI+VIA+GRME+GV  ++SG WVVT+GQDLL
Sbjct:  141 KQLEAKDLTSQAEVDXXXXXXXXXXXXXXXXXAQRDQSASIVEQRREELSKAIIKAPISGTVGQRNAEIGMQANTSTQLFLIGDLTRLKVEIVLTEDMLSQINVGQTARVIVENRDGEQTALEAEISRISPFLNEVTRSTQAEIDVNNESGLLRPGMFVPVDILFGESEQATLIPISALFTNTQTGESGVYLASSLGSEIEPVSDSSANGSNRPAAMSAPTPVEFVPIDVIAQGRMELGVAGIESGQWVVTMGQDLL 397          
BLAST of mRNA_M-pyrifera_M_contig90645.21013.1 vs. uniprot
Match: UPI00035EBBC9 (efflux RND transporter periplasmic adaptor subunit n=1 Tax=Gracilimonas tropica TaxID=454600 RepID=UPI00035EBBC9)

HSP 1 Score: 271 bits (693), Expect = 9.740e-86
Identity = 152/256 (59.38%), Postives = 194/256 (75.78%), Query Frame = 1
Query:   19 KQLADKDLSSDLEIEQLQAQLISAEAXXXXXXXXVSQSESLVKERKEALRRTTITAPISGTIGQRNAQVGMQVNQNTQLFLIGDLTKLRVEIVLTESMLNRISIGQNAEILVMDYEGNEQIIMAKLSRISPFLNEITRSTEAEIDVENTNGWLKPGMFVPVDINFGESQQATLIPVSALFTDPTSGAQGVFVASSLGAEIQPASDETNEEDELSHLTEPTSVTFKPINVIARGRMEVGVGELQSGDWVVTIGQDLL 786
            KQL DK+L+S +E+EQ          XXXXXXXX              L +  I APISG IG+RNA++GMQV+ NTQLFLIGDL++L++EIVLTE+MLNRI++GQ+A ILV D  G E ++ A++SRISPFLNE+TRST AEIDV+N NG L+PGMFVPVD+ FGESQQATLIP SAL+TDPT+G +GVF+A SL +EIQP +D ++E +    +TEP  V F PI+V+A GRME+GV  +++G WVVT+GQDLL
Sbjct:  141 KQLEDKELTSQVEVEQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSKAVIKAPISGNIGRRNAEIGMQVSTNTQLFLIGDLSRLKIEIVLTENMLNRINVGQSARILVDDSNGGETVLNAEVSRISPFLNEVTRSTVAEIDVDNRNGLLRPGMFVPVDVLFGESQQATLIPTSALYTDPTTGQEGVFIARSLSSEIQPVTD-SSESNGSRAMTEPLPVEFVPIDVLAEGRMELGVNGVENGQWVVTVGQDLL 395          
BLAST of mRNA_M-pyrifera_M_contig90645.21013.1 vs. uniprot
Match: A0A6M1T3A5_9BACT (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Balneolaceae bacterium YR4-1 TaxID=2709311 RepID=A0A6M1T3A5_9BACT)

HSP 1 Score: 270 bits (690), Expect = 3.460e-85
Identity = 152/264 (57.58%), Postives = 197/264 (74.62%), Query Frame = 1
Query:    7 FNRTKQLADKDLSSDLEIEQLQAQLISAEAXXXXXXXXVSQSESLVKERKEALRRTTITAPISGTIGQRNAQVGMQVNQNTQLFLIGDLTKLRVEIVLTESMLNRISIGQNAEILVMDYE----GNEQIIMAKLSRISPFLNEITRSTEAEIDVENTNGWLKPGMFVPVDINFGESQQATLIPVSALFTDPTSGAQGVFVASSLGAEIQPASDETNEEDELSHLTEPTSVTFKPINVIARGRMEVGVGELQSGDWVVTIGQDLL 786
            + RTK L++K+LSSDLE+E+L+AQ      XXXXXXXX         ER++ L RT I APISGT+GQRNA++GMQV+  TQLF+IGDL +LR+E+VLTE+ML  I +GQ A I     +     +  ++ A+LSRISPFLN +TRSTEAEIDV+N N  L+PGMFV VDI +GES QATLIP SAL+TDP +G +GV+VA+SLG+E++   D +N E E S LT+P  V FKP+NVIA GRME+GV  ++SG W+VT+GQ+LL
Sbjct:  143 YKRTKVLSEKELSSDLEMERLEAQXXXXXXXXXXXXXXXXXXXXXXXERRDLLSRTVIRAPISGTVGQRNAEIGMQVSTGTQLFIIGDLDELRIEVVLTENMLKNIEVGQTARIYASGTDETAGSSPTVLTAQLSRISPFLNNVTRSTEAEIDVKNQNNMLRPGMFVAVDILYGESTQATLIPTSALYTDPNTGNEGVYVATSLGSEVEVIEDSSNSE-EPSALTQPIDVQFKPVNVIAEGRMELGVSGVESGSWIVTVGQNLL 405          
BLAST of mRNA_M-pyrifera_M_contig90645.21013.1 vs. uniprot
Match: A0A2A2GCX8_9BACT (Efflux transporter periplasmic adaptor subunit n=1 Tax=Aliifodinibius sp. WN023 TaxID=2032627 RepID=A0A2A2GCX8_9BACT)

HSP 1 Score: 265 bits (676), Expect = 3.610e-83
Identity = 150/262 (57.25%), Postives = 195/262 (74.43%), Query Frame = 1
Query:    1 SRFNRTKQLADKDLSSDLEIEQLQAQLISAEAXXXXXXXXVSQSESLVKERKEALRRTTITAPISGTIGQRNAQVGMQVNQNTQLFLIGDLTKLRVEIVLTESMLNRISIGQNAEILVMDYEGNEQIIMAKLSRISPFLNEITRSTEAEIDVENTNGWLKPGMFVPVDINFGESQQATLIPVSALFTDPTSGAQGVFVASSLGAEIQPASDETNEEDELSHLTEPTSVTFKPINVIARGRMEVGVGELQSGDWVVTIGQDLL 786
            +++ RTKQL+D++LSS+LE+E LQA       XXXXXXXX     S + E+++ L +T I APISGT+GQR+A+ GMQV+ +TQL+ IGDL  LRVE+VLT+ ML+ I +GQ A I       N   I A+LSRISPFLN ITRSTE EIDV+NT   L+PGMFVPVDI +G+S++ATL+P SA++TDP SG +GVFVA+SLG+EIQPA  E  + +    LT PT V FK I+VIA GRMEVGV  ++ G+WV+T+GQ+LL
Sbjct:  137 AQYRRTKQLSDQELSSELEMETLQAXXXXXXXXXXXXXXXXXXXXSSLAEQQDMLSKTVIKAPISGTVGQRSAETGMQVSSSTQLYTIGDLDNLRVEVVLTDQMLDDIEVGQTARIYTSSNANNSDFIEAELSRISPFLNNITRSTEGEIDVQNTGNKLRPGMFVPVDILYGQSERATLVPTSAIYTDPNSGEEGVFVATSLGSEIQPA--EQVDPENPPPLTAPTEVQFKSIDVIAEGRMEVGVEGIEPGNWVITVGQNLL 396          
BLAST of mRNA_M-pyrifera_M_contig90645.21013.1 vs. uniprot
Match: A0A1M5FNP3_9BACT (RND family efflux transporter, MFP subunit n=1 Tax=Aliifodinibius roseus TaxID=1194090 RepID=A0A1M5FNP3_9BACT)

HSP 1 Score: 259 bits (663), Expect = 2.450e-81
Identity = 150/258 (58.14%), Postives = 189/258 (73.26%), Query Frame = 1
Query:   16 TKQLADKDLSSDLEIEQLQAQLISAEAXXXXXXXXVSQSESLVKERKEALRRTTITAPISGTIGQRNAQVGMQVNQNTQLFLIGDLTKLRVEIVLTESMLNRISIGQNAEILVMDYEG-NEQIIMAKLSRISPFLNEITRSTEAEIDVENTNGWLKPGMFVPVDINFGESQQATLIPVSALFTDPTSGAQGVFVASSLGAEIQPASDETNEEDELSHLTEPTSVTFKPINVIARGRMEVGVGELQSGDWVVTIGQDLL 786
            TKQL+DK+LSSD+E+E L         XXXXXXXX          ++E L +T I API+GT+GQRNA+VGMQV  NT LF IGDL  LR+E+VLT+ MLN++ IGQ A I      G N ++I A+LSRISPFLN ITRSTE EIDV + +  L+PGMFVPVDI +GES+QAT+IP SALFT+P +G +GV+VA+SLG+EI+P   E  E + L  LTEPT V F P++VIA GR+EVG+  ++SG WVVT+GQDLL
Sbjct:  140 TKQLSDKNLSSDMEMETLXXXXXXXXXXXXXXXXXXXXXXXXXXXQQEVLSKTVIRAPINGTVGQRNAEVGMQVGPNTSLFKIGDLNNLRIEVVLTDDMLNKVQIGQTARIYTGSAAGGNREVIEARLSRISPFLNNITRSTEGEIDVADRDHNLRPGMFVPVDILYGESRQATIIPTSALFTNPNTGEEGVYVAASLGSEIEPV--EQVEGENLPPLTEPTGVQFHPVDVIAEGRLEVGIEGIESGSWVVTVGQDLL 395          
BLAST of mRNA_M-pyrifera_M_contig90645.21013.1 vs. uniprot
Match: A0A2D9FSG3_9BACT (Efflux transporter periplasmic adaptor subunit n=2 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D9FSG3_9BACT)

HSP 1 Score: 255 bits (651), Expect = 1.950e-79
Identity = 148/258 (57.36%), Postives = 190/258 (73.64%), Query Frame = 1
Query:   19 KQLADKDLSSDLEIEQLQAQLISAEAXXXXXXXXVSQSESLVKERKEALRRTTITAPISGTIGQRNAQVGMQVNQNTQLFLIGDLTKLRVEIVLTESMLNRISIGQNAEILVMDYEGNEQ--IIMAKLSRISPFLNEITRSTEAEIDVENTNGWLKPGMFVPVDINFGESQQATLIPVSALFTDPTSGAQGVFVASSLGAEIQPASDETNEEDELSHLTEPTSVTFKPINVIARGRMEVGVGELQSGDWVVTIGQDLL 786
            KQL +KDL+S +E+EQ          XXXXXXXX          ++E L +  I API+G+IG+RNA+VGMQVN  TQLFLIGDL+KL++EIVLTE+MLN I++GQ+A ILV    GN Q  ++  K+SRISPFLNEITRST AEIDV N+ G L+PGMFVPVD+ FGE+QQ+TLIP SAL+ DP +G  GVF+A SL +EIQP +D ++     + +TEP  V F P++VIA GRME+GV  +++G WVVT+GQDLL
Sbjct:  141 KQLEEKDLTSQVEVEQAXXXXXXXXXXXXXXXXXXXXXXXXXXXQEEELSKAVIRAPITGSIGRRNAEVGMQVNTGTQLFLIGDLSKLKIEIVLTENMLNSINVGQSARILV---NGNNQNTVLNGKVSRISPFLNEITRSTTAEIDVNNSEGLLRPGMFVPVDVLFGETQQSTLIPTSALYNDPNTGQTGVFLARSLSSEIQPVTDSSDSSTPRA-MTEPVPVEFVPVDVIAEGRMELGVSGVENGQWVVTVGQDLL 394          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90645.21013.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D1GD62_9BACT8.200e-11472.90Efflux RND transporter periplasmic adaptor subunit... [more]
A0A521C419_9BACT7.020e-10065.15RND family efflux transporter, MFP subunit n=1 Tax... [more]
A0A1B6Y6F2_9BACT1.070e-9660.77HlyD_D23 domain-containing protein n=2 Tax=Balneol... [more]
A0A2D8CHK9_9BACT1.830e-9263.81Efflux transporter periplasmic adaptor subunit n=2... [more]
UPI000CD8C5DD7.290e-8657.98efflux RND transporter periplasmic adaptor subunit... [more]
UPI00035EBBC99.740e-8659.38efflux RND transporter periplasmic adaptor subunit... [more]
A0A6M1T3A5_9BACT3.460e-8557.58Efflux RND transporter periplasmic adaptor subunit... [more]
A0A2A2GCX8_9BACT3.610e-8357.25Efflux transporter periplasmic adaptor subunit n=1... [more]
A0A1M5FNP3_9BACT2.450e-8158.14RND family efflux transporter, MFP subunit n=1 Tax... [more]
A0A2D9FSG3_9BACT1.950e-7957.36Efflux transporter periplasmic adaptor subunit n=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90645contigM-pyrifera_M_contig90645:2..787 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score275.8
Seed ortholog evalue2.1e-71
Seed eggNOG ortholog1121930.AQXG01000001_gene1262
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
EggNOG OGsCOG0845@1,COG0845@2
COG Functional cat.M
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
Exons1
Model size786
Cds size786
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816818.265095-CDS-M-pyrifera_M_contig90645:1..7871622816818.265095-CDS-M-pyrifera_M_contig90645:1..787Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90645 2..787 -
1692278196.3789568-CDS-M-pyrifera_M_contig90645:1..7871692278196.3789568-CDS-M-pyrifera_M_contig90645:1..787Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90645 2..787 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90645.21013.1prot_M-pyrifera_M_contig90645.21013.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90645 2..787 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90645.21013.1

>prot_M-pyrifera_M_contig90645.21013.1 ID=prot_M-pyrifera_M_contig90645.21013.1|Name=mRNA_M-pyrifera_M_contig90645.21013.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=262bp
SRFNRTKQLADKDLSSDLEIEQLQAQLISAEADVELAKAQVSQSESLVKE
RKEALRRTTITAPISGTIGQRNAQVGMQVNQNTQLFLIGDLTKLRVEIVL
TESMLNRISIGQNAEILVMDYEGNEQIIMAKLSRISPFLNEITRSTEAEI
DVENTNGWLKPGMFVPVDINFGESQQATLIPVSALFTDPTSGAQGVFVAS
SLGAEIQPASDETNEEDELSHLTEPTSVTFKPINVIARGRMEVGVGELQS
GDWVVTIGQDLL
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mRNA from alignment at M-pyrifera_M_contig90645:2..787-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90645.21013.1 ID=mRNA_M-pyrifera_M_contig90645.21013.1|Name=mRNA_M-pyrifera_M_contig90645.21013.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=786bp|location=Sequence derived from alignment at M-pyrifera_M_contig90645:2..787- (Macrocystis pyrifera P11B4 male)
TCACGGTTTAATCGCACAAAACAACTGGCTGATAAAGACTTAAGTAGTGA TTTGGAAATAGAACAACTTCAAGCTCAGTTAATTTCTGCAGAAGCCGATG TTGAATTAGCTAAAGCTCAGGTATCGCAATCGGAATCGTTGGTTAAAGAA AGAAAAGAGGCACTCCGTAGGACTACTATAACGGCTCCGATTTCTGGAAC TATTGGCCAGCGAAATGCTCAGGTTGGGATGCAGGTGAACCAAAACACCC AACTTTTCTTAATTGGGGACTTAACTAAACTAAGAGTAGAAATTGTTTTA ACTGAAAGTATGTTGAATCGAATCTCGATTGGACAAAATGCTGAGATTTT GGTTATGGATTACGAAGGGAATGAACAAATAATTATGGCGAAACTATCCC GGATTTCACCCTTCCTAAATGAAATAACCAGAAGTACAGAAGCAGAAATA GATGTAGAAAATACCAACGGTTGGTTAAAACCAGGAATGTTTGTCCCTGT AGATATCAATTTTGGAGAAAGCCAACAGGCTACACTTATTCCAGTTAGCG CATTATTCACTGATCCTACTTCTGGAGCTCAAGGCGTTTTCGTTGCCTCT TCTTTAGGGGCTGAAATTCAACCCGCATCGGATGAAACAAACGAAGAAGA TGAACTTTCTCACCTTACTGAACCAACTTCGGTTACTTTTAAACCTATTA ATGTAATTGCCAGAGGAAGAATGGAAGTAGGCGTTGGTGAGTTACAAAGC GGTGATTGGGTTGTTACCATTGGTCAGGATTTATTA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig90645:2..787-

>mRNA_M-pyrifera_M_contig90645.21013.1 ID=mRNA_M-pyrifera_M_contig90645.21013.1|Name=mRNA_M-pyrifera_M_contig90645.21013.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1572bp|location=Sequence derived from alignment at M-pyrifera_M_contig90645:2..787- (Macrocystis pyrifera P11B4 male)
TCACGGTTTAATCGCACAAAACAACTGGCTGATAAAGACTTAAGTAGTGA
TTTGGAAATAGAACAACTTCAAGCTCAGTTAATTTCTGCAGAAGCCGATG
TTGAATTAGCTAAAGCTCAGGTATCGCAATCGGAATCGTTGGTTAAAGAA
AGAAAAGAGGCACTCCGTAGGACTACTATAACGGCTCCGATTTCTGGAAC
TATTGGCCAGCGAAATGCTCAGGTTGGGATGCAGGTGAACCAAAACACCC
AACTTTTCTTAATTGGGGACTTAACTAAACTAAGAGTAGAAATTGTTTTA
ACTGAAAGTATGTTGAATCGAATCTCGATTGGACAAAATGCTGAGATTTT
GGTTATGGATTACGAAGGGAATGAACAAATAATTATGGCGAAACTATCCC
GGATTTCACCCTTCCTAAATGAAATAACCAGAAGTACAGAAGCAGAAATA
GATGTAGAAAATACCAACGGTTGGTTAAAACCAGGAATGTTTGTCCCTGT
AGATATCAATTTTGGAGAAAGCCAACAGGCTACACTTATTCCAGTTAGCG
CATTATTCACTGATCCTACTTCTGGAGCTCAAGGCGTTTTCGTTGCCTCT
TCTTTAGGGGCTGAAATTCAACCCGCATCGGATGAAACAAACGAAGAAGA
TGAACTTTCTCACCTTACTGAACCAACTTCGGTTACTTTTAAACCTATTA
ATGTAATTGCCAGAGGAAGAATGGAAGTAGGCGTTGGTGAGTTACAAAGC
GGTGATTGGGTTGTTACCATTGGTCAGGATTTATTATCACGGTTTAATCG
CACAAAACAACTGGCTGATAAAGACTTAAGTAGTGATTTGGAAATAGAAC
AACTTCAAGCTCAGTTAATTTCTGCAGAAGCCGATGTTGAATTAGCTAAA
GCTCAGGTATCGCAATCGGAATCGTTGGTTAAAGAAAGAAAAGAGGCACT
CCGTAGGACTACTATAACGGCTCCGATTTCTGGAACTATTGGCCAGCGAA
ATGCTCAGGTTGGGATGCAGGTGAACCAAAACACCCAACTTTTCTTAATT
GGGGACTTAACTAAACTAAGAGTAGAAATTGTTTTAACTGAAAGTATGTT
GAATCGAATCTCGATTGGACAAAATGCTGAGATTTTGGTTATGGATTACG
AAGGGAATGAACAAATAATTATGGCGAAACTATCCCGGATTTCACCCTTC
CTAAATGAAATAACCAGAAGTACAGAAGCAGAAATAGATGTAGAAAATAC
CAACGGTTGGTTAAAACCAGGAATGTTTGTCCCTGTAGATATCAATTTTG
GAGAAAGCCAACAGGCTACACTTATTCCAGTTAGCGCATTATTCACTGAT
CCTACTTCTGGAGCTCAAGGCGTTTTCGTTGCCTCTTCTTTAGGGGCTGA
AATTCAACCCGCATCGGATGAAACAAACGAAGAAGATGAACTTTCTCACC
TTACTGAACCAACTTCGGTTACTTTTAAACCTATTAATGTAATTGCCAGA
GGAAGAATGGAAGTAGGCGTTGGTGAGTTACAAAGCGGTGATTGGGTTGT
TACCATTGGTCAGGATTTATTA
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