mRNA_M-pyrifera_M_contig90599.21010.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90599.21010.1
Unique NamemRNA_M-pyrifera_M_contig90599.21010.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig90599.21010.1 vs. uniprot
Match: A0A517WID3_9PLAN (Squalene--hopene cyclase n=6 Tax=Gimesia TaxID=1649453 RepID=A0A517WID3_9PLAN)

HSP 1 Score: 519 bits (1336), Expect = 1.560e-180
Identity = 254/263 (96.58%), Postives = 258/263 (98.10%), Query Frame = 1
Query:    1 NLATWTTTLSVNALEGTLSEFEKAPIRDWLIQQQYTELHPYTAAEPGGWAWTDLPGGVPDADDTPGAILALLNLQTEESDEVSPELQTSLRNGVNWLLDLQNSNGGWPTFCRGWGTLPFDQSAADISAHVLRALEAWLKTDATAEESTLRTRATQAIERGYKYLAAQQRPDGSWLPLWFGNQHVDDDENPVYGTARVLAAYADEERRTTPQAEQAIQFMQSVQNPDGGWGGAEGAPSSVEETALAVDALLSVGLSLENPCLQQ 789
            NLATWTTTLSVNALEGTLSEFEKAPIRDWLIQQQYTELHPYTAAEPGGWAWTDLPGGVPDADDTPGAILALLNLQTEE+ E SPEL+TSLRNGVNWLLDLQNSNGGWPTFCRGWGTLPFDQSAADISAHVLRALEAWLKT+ATAEESTLRTRAT AIERG+KYLA QQR DGSWLPLWFGNQHVDDDENPVYGTARVLAAYADEERRTTPQAEQAIQFMQSVQNPDGGWGGAEGAPSSVEETALAVDALLSVGLSLENPCLQQ
Sbjct:  282 NLATWTTTLSVNALEGTLSEFEKAPIRDWLIQQQYTELHPYTAAEPGGWAWTDLPGGVPDADDTPGAILALLNLQTEEAAEASPELRTSLRNGVNWLLDLQNSNGGWPTFCRGWGTLPFDQSAADISAHVLRALEAWLKTEATAEESTLRTRATWAIERGFKYLATQQRTDGSWLPLWFGNQHVDDDENPVYGTARVLAAYADEERRTTPQAEQAIQFMQSVQNPDGGWGGAEGAPSSVEETALAVDALLSVGLSLENPCLQQ 544          
BLAST of mRNA_M-pyrifera_M_contig90599.21010.1 vs. uniprot
Match: A0A518FUR4_9PLAN (Squalene--hopene cyclase n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FUR4_9PLAN)

HSP 1 Score: 468 bits (1203), Expect = 2.140e-160
Identity = 226/263 (85.93%), Postives = 241/263 (91.63%), Query Frame = 1
Query:    1 NLATWTTTLSVNALEGTLSEFEKAPIRDWLIQQQYTELHPYTAAEPGGWAWTDLPGGVPDADDTPGAILALLNLQTEESDEVSPELQTSLRNGVNWLLDLQNSNGGWPTFCRGWGTLPFDQSAADISAHVLRALEAWLKTDATAEESTLRTRATQAIERGYKYLAAQQRPDGSWLPLWFGNQHVDDDENPVYGTARVLAAYADEERRTTPQAEQAIQFMQSVQNPDGGWGGAEGAPSSVEETALAVDALLSVGLSLENPCLQQ 789
            NLATWTTTLSVNAL+GTLSEFEKAPIRDWL+QQQY ELHPYTAAEPGGWAWTDLPGGVPDADDTPGAILALLNLQ  ES++V+PEL ++LRNGVNWLLDLQNSNGGWPTFCRGWGTLPFDQSAADISAHVLRALEAWL T A   +S LR RA QAIERG+ YL  QQR DGSWLPLWFGNQH+ DDENPVYGTARVLAAYA EERRT+PQAEQA+QF+ SVQNPDGGWGGAEGAPSSVEETALAVDALL+VG+SLE P L Q
Sbjct:  281 NLATWTTTLSVNALDGTLSEFEKAPIRDWLLQQQYKELHPYTAAEPGGWAWTDLPGGVPDADDTPGAILALLNLQPVESEQVAPELSSALRNGVNWLLDLQNSNGGWPTFCRGWGTLPFDQSAADISAHVLRALEAWLSTAADPADSDLRARAAQAIERGFNYLTTQQRDDGSWLPLWFGNQHIADDENPVYGTARVLAAYAAEERRTSPQAEQAVQFLHSVQNPDGGWGGAEGAPSSVEETALAVDALLAVGVSLETPWLAQ 543          
BLAST of mRNA_M-pyrifera_M_contig90599.21010.1 vs. uniprot
Match: A0A517RKW6_9PLAN (Squalene--hopene cyclase n=2 Tax=Gimesia TaxID=1649453 RepID=A0A517RKW6_9PLAN)

HSP 1 Score: 422 bits (1086), Expect = 1.120e-142
Identity = 202/264 (76.52%), Postives = 230/264 (87.12%), Query Frame = 1
Query:    1 NLATWTTTLSVNALEGTLSEFEKAPIRDWLIQQQYTELHPYTAAEPGGWAWTDLPGGVPDADDTPGAILALLNLQTEESD-EVSPELQTSLRNGVNWLLDLQNSNGGWPTFCRGWGTLPFDQSAADISAHVLRALEAWLKTDATAEESTLRTRATQAIERGYKYLAAQQRPDGSWLPLWFGNQHVDDDENPVYGTARVLAAYADEERRTTPQAEQAIQFMQSVQNPDGGWGGAEGAPSSVEETALAVDALLSVGLSLENPCLQQ 789
            NLATWTTTLSVNA+EGTLSEFEKAPIRDWL+ QQY ELHPYT+AEPGGWAWTDLPGGVPDADDTPGAILALLNL++EES  E+S E++T+LRNGV WLLDLQNSNGGWPTFCRGWGTLPFDQSAADISAH +RA++AWL+TD+  EE+ LRTRA  AI   ++YLA+ QR DGSWLPLWFGNQH+ DDENPVYGTARVLAAYA  +RR + QA QAI F++SVQNPDGGWGG   APSSVEETALA+D LL +G+   +P + Q
Sbjct:  282 NLATWTTTLSVNAIEGTLSEFEKAPIRDWLLNQQYKELHPYTSAEPGGWAWTDLPGGVPDADDTPGAILALLNLRSEESGTELSTEVRTALRNGVKWLLDLQNSNGGWPTFCRGWGTLPFDQSAADISAHAIRAIQAWLETDSLPEENALRTRAAHAITHSFRYLASVQRADGSWLPLWFGNQHIHDDENPVYGTARVLAAYATADRRNSSQALQAIDFLKSVQNPDGGWGGDATAPSSVEETALAIDTLLLIGVERNSPTIVQ 545          
BLAST of mRNA_M-pyrifera_M_contig90599.21010.1 vs. uniprot
Match: A0A2E2BZI0_9PLAN (Squalene--hopene cyclase n=5 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2BZI0_9PLAN)

HSP 1 Score: 422 bits (1085), Expect = 1.590e-142
Identity = 204/264 (77.27%), Postives = 228/264 (86.36%), Query Frame = 1
Query:    1 NLATWTTTLSVNALEGTLSEFEKAPIRDWLIQQQYTELHPYTAAEPGGWAWTDLPGGVPDADDTPGAILALLNLQTEESD-EVSPELQTSLRNGVNWLLDLQNSNGGWPTFCRGWGTLPFDQSAADISAHVLRALEAWLKTDATAEESTLRTRATQAIERGYKYLAAQQRPDGSWLPLWFGNQHVDDDENPVYGTARVLAAYADEERRTTPQAEQAIQFMQSVQNPDGGWGGAEGAPSSVEETALAVDALLSVGLSLENPCLQQ 789
            NLATWTTTLSVNA+EGTL EFEK P+R WL+QQQY ELHPYT+AEPGGWAWTDLPGGVPDADDTPGAILALLNL+ EESD + + ELQ +LRNGV WLLDLQNSNGGWPTFCRGWG LPFDQSAADISAH +RAL+AWLKT+  + E+ LR RA +AI R ++YLA  QRPDGSWLPLWFGNQH+D+DENPVYGTARVLAAYA E  R + QAEQ I F++SVQN DGGWGGA GAPSSVEETALAVD LL++GLS E P + Q
Sbjct:  282 NLATWTTTLSVNAIEGTLPEFEKTPLRQWLLQQQYKELHPYTSAEPGGWAWTDLPGGVPDADDTPGAILALLNLRAEESDPQQTAELQMALRNGVKWLLDLQNSNGGWPTFCRGWGALPFDQSAADISAHAIRALQAWLKTEPLSAEAALRLRAERAIRRCFQYLATVQRPDGSWLPLWFGNQHIDNDENPVYGTARVLAAYASEAERASSQAEQGILFLKSVQNLDGGWGGATGAPSSVEETALAVDTLLALGLSPEEPVVAQ 545          
BLAST of mRNA_M-pyrifera_M_contig90599.21010.1 vs. uniprot
Match: A0A517VJA7_9PLAN (Squalene--hopene cyclase n=6 Tax=Planctomycetaceae TaxID=126 RepID=A0A517VJA7_9PLAN)

HSP 1 Score: 421 bits (1082), Expect = 4.500e-142
Identity = 205/264 (77.65%), Postives = 229/264 (86.74%), Query Frame = 1
Query:    1 NLATWTTTLSVNALEGTLSEFEKAPIRDWLIQQQYTELHPYTAAEPGGWAWTDLPGGVPDADDTPGAILALLNLQTEESD-EVSPELQTSLRNGVNWLLDLQNSNGGWPTFCRGWGTLPFDQSAADISAHVLRALEAWLKTDATAEESTLRTRATQAIERGYKYLAAQQRPDGSWLPLWFGNQHVDDDENPVYGTARVLAAYADEERRTTPQAEQAIQFMQSVQNPDGGWGGAEGAPSSVEETALAVDALLSVGLSLENPCLQQ 789
            NLATWTTTLSVNA+EGTLSEFEKAPIR+WL+QQQY ELHPYT+AEPGGWAWTDLPGGVPD DDTPGA+LALLNLQ EE D + + +LQT+LRNGV WLLDLQNSNGGWPTFCRGWG LPFDQSAADISAHV+RAL+AWLKTD  +EE+ LR R  +A+ R ++YLA  QR DGSWLPLWFGNQHV++DENPVYGTARVLAAYA    R + QAEQ I F++SVQN DGGWGGA GAPSSVEETALAVD LL VGL LE+P + Q
Sbjct:  282 NLATWTTTLSVNAIEGTLSEFEKAPIREWLLQQQYKELHPYTSAEPGGWAWTDLPGGVPDGDDTPGALLALLNLQPEEPDAQQAGDLQTALRNGVRWLLDLQNSNGGWPTFCRGWGALPFDQSAADISAHVIRALQAWLKTDPHSEETDLRLRVERAVRRCFQYLATVQRNDGSWLPLWFGNQHVENDENPVYGTARVLAAYAKGTERESNQAEQGILFLKSVQNLDGGWGGATGAPSSVEETALAVDTLLMVGLELEDPVVAQ 545          
BLAST of mRNA_M-pyrifera_M_contig90599.21010.1 vs. uniprot
Match: A0A517VSR8_9PLAN (Squalene--hopene cyclase n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VSR8_9PLAN)

HSP 1 Score: 416 bits (1068), Expect = 5.850e-140
Identity = 200/260 (76.92%), Postives = 229/260 (88.08%), Query Frame = 1
Query:    1 NLATWTTTLSVNALEGTLSEFEKAPIRDWLIQQQYTELHPYTAAEPGGWAWTDLPGGVPDADDTPGAILALLNLQTEESD-EVSPELQTSLRNGVNWLLDLQNSNGGWPTFCRGWGTLPFDQSAADISAHVLRALEAWLKTDATAEESTLRTRATQAIERGYKYLAAQQRPDGSWLPLWFGNQHVDDDENPVYGTARVLAAYADEERRTTPQAEQAIQFMQSVQNPDGGWGGAEGAPSSVEETALAVDALLSVGLSLENP 777
            NLATWTTTLSVNA++GTLSEFEKAPIR WL+QQQY ELHPYT+AEPGGWAWTDLPGGVPDADDTPGAILALLNL+ E+S+ E+S EL+ +LRNGV WLLDLQNSNGGWPTFCRGWGTLPFDQSAADISAHV+RAL+AWL+T+    +  LR RA  AI+R ++YLA+ QR DGSWLPLWFGNQH+ +DENPVYGTARVLAAYA +E   + QAEQAI+F++SVQN DGGWGG  GAPSSVEETALAVD LL++GL  +NP
Sbjct:  282 NLATWTTTLSVNAIQGTLSEFEKAPIRQWLLQQQYQELHPYTSAEPGGWAWTDLPGGVPDADDTPGAILALLNLRPEDSEHELSSELRLALRNGVQWLLDLQNSNGGWPTFCRGWGTLPFDQSAADISAHVIRALQAWLETEPDDADIPLRKRAEHAIQRSFRYLASVQRNDGSWLPLWFGNQHIKNDENPVYGTARVLAAYASQEMSDSTQAEQAIKFLKSVQNTDGGWGGDAGAPSSVEETALAVDTLLAMGLDPDNP 541          
BLAST of mRNA_M-pyrifera_M_contig90599.21010.1 vs. uniprot
Match: A0A350KJE5_9PLAN (Squalene--hopene cyclase (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350KJE5_9PLAN)

HSP 1 Score: 408 bits (1049), Expect = 3.580e-139
Identity = 198/255 (77.65%), Postives = 223/255 (87.45%), Query Frame = 1
Query:    1 NLATWTTTLSVNALEGTLSEFEKAPIRDWLIQQQYTELHPYTAAEPGGWAWTDLPGGVPDADDTPGAILALLNLQTEESD-EVSPELQTSLRNGVNWLLDLQNSNGGWPTFCRGWGTLPFDQSAADISAHVLRALEAWLKTDATAEESTLRTRATQAIERGYKYLAAQQRPDGSWLPLWFGNQHVDDDENPVYGTARVLAAYADEERRTTPQAEQAIQFMQSVQNPDGGWGGAEGAPSSVEETALAVDALLSVGL 762
            NLATWTTTLSVNALEGTL+EFEK PIR+WL+QQQY ELHPYT+AEPGGWAWTDLPGGVPDADDTPGAILALLNLQ EE D + + +LQ +LRNGV WLLDLQNSNGGWPTFCRGWG LPFDQSAADISAHV+RAL+AWL+T+  + E+ LR RA +A+   +KYLA  QRPDGSWLPLWFGNQHV++DENPVYGTARVLAAYA  E+  + QAEQ I F++SVQN DGGWGGA  APSSVEETALAVD LL++GL
Sbjct:  129 NLATWTTTLSVNALEGTLAEFEKTPIREWLLQQQYKELHPYTSAEPGGWAWTDLPGGVPDADDTPGAILALLNLQPEEPDTQQTADLQVALRNGVKWLLDLQNSNGGWPTFCRGWGALPFDQSAADISAHVIRALQAWLQTEPESAEAELRLRAERAVRNSFKYLAKVQRPDGSWLPLWFGNQHVENDENPVYGTARVLAAYAHGEQCGSIQAEQGILFLKSVQNLDGGWGGATSAPSSVEETALAVDTLLALGL 383          
BLAST of mRNA_M-pyrifera_M_contig90599.21010.1 vs. uniprot
Match: A0A3C0AG37_9PLAN (Squalene--hopene cyclase (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3C0AG37_9PLAN)

HSP 1 Score: 335 bits (858), Expect = 1.040e-112
Identity = 163/217 (75.12%), Postives = 183/217 (84.33%), Query Frame = 1
Query:  142 GWAWTDLPGGVPDADDTPGAILALLNLQTEESD-EVSPELQTSLRNGVNWLLDLQNSNGGWPTFCRGWGTLPFDQSAADISAHVLRALEAWLKTDATAEESTLRTRATQAIERGYKYLAAQQRPDGSWLPLWFGNQHVDDDENPVYGTARVLAAYADEERRTTPQAEQAIQFMQSVQNPDGGWGGAEGAPSSVEETALAVDALLSVGLSLENPCLQQ 789
            GWAWTDLPGGVPDADDTPGAILALLNL+ EESD + + EL  +LRNGV WLLDLQNSNGGWPTFCRGWG LPFDQSAADISAH +RAL+AWLKT+  + E+ LR RA +AI R ++YLA  QRPDGSWLPLWFGNQH+D+DENPVYGTARVLAAYA E  R + QAE  I F++SVQN DGGWGGA GAPSSVEETALAVD LL++GLS E P + Q
Sbjct:    2 GWAWTDLPGGVPDADDTPGAILALLNLRAEESDPQQTAELHMALRNGVKWLLDLQNSNGGWPTFCRGWGALPFDQSAADISAHAIRALQAWLKTEPLSAEAALRLRAERAIRRCFQYLATVQRPDGSWLPLWFGNQHIDNDENPVYGTARVLAAYASEAERASSQAEPGILFLKSVQNLDGGWGGATGAPSSVEETALAVDTLLALGLSPEEPVVAQ 218          
BLAST of mRNA_M-pyrifera_M_contig90599.21010.1 vs. uniprot
Match: A0A517ZV94_9PLAN (Sporulenol synthase n=4 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZV94_9PLAN)

HSP 1 Score: 340 bits (871), Expect = 2.180e-110
Identity = 167/251 (66.53%), Postives = 201/251 (80.08%), Query Frame = 1
Query:    1 NLATWTTTLSVNALEGTLSEFEKAPIRDWLIQQQYTELHPYTAAEPGGWAWTDLPGGVPDADDTPGAILALLNLQTEESDEVSPELQTSLRNGVNWLLDLQNSNGGWPTFCRGWGTLPFDQSAADISAHVLRALEAWLKTDATAEESTLRTRATQAIERGYKYLAAQQRPDGSWLPLWFGNQHVDDDENPVYGTARVLAAYADEERRTTPQAEQAIQFMQSVQNPDGGWGGAEGAPSSVEETALAVDALLS 753
            NLATWTTTLSVNAL+  LS  +++ IRDWL+QQQY E+HPYT A+PGGWAWTDL GGVPDADDTPGAILALL L+TEE+  +  +   +L   VNWLLDLQN +GGWPTFCRGWG LPFD+SAAD++AH +RAL AW      AE + L +R+ QAI+RG+ YL+  QR DGSWLPLWFGNQ   DDENPVYGTARVLAAYA+  R  +PQA+Q +++++SVQN DGGWGG  G  SSVEETALAV+A+L+
Sbjct:  284 NLATWTTTLSVNALQDDLSVEDQSAIRDWLLQQQYREVHPYTNADPGGWAWTDLSGGVPDADDTPGAILALLKLRTEET--IPADEAEALAAAVNWLLDLQNRDGGWPTFCRGWGALPFDRSAADLTAHAIRALLAWKSRQPEAEPALL-SRSAQAIQRGFAYLSKVQRADGSWLPLWFGNQFSPDDENPVYGTARVLAAYAEAGRYDSPQAQQGLKWIKSVQNSDGGWGGNAGISSSVEETALAVEAILA 531          
BLAST of mRNA_M-pyrifera_M_contig90599.21010.1 vs. uniprot
Match: A0A2D6SUE9_9PLAN (Squalene--hopene cyclase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2D6SUE9_9PLAN)

HSP 1 Score: 322 bits (824), Expect = 1.870e-103
Identity = 160/253 (63.24%), Postives = 191/253 (75.49%), Query Frame = 1
Query:    1 NLATWTTTLSVNALEGTLSEFEKAPIRDWLIQQQYTELHPYTAAEPGGWAWTDLPGGVPDADDTPGAILALLNLQTEESDEVSPELQ-TSLRNGVNWLLDLQNSNGGWPTFCRGWGTLPFDQSAADISAHVLRALEAWLKTDATAEES-TLRTRATQAIERGYKYLAAQQRPDGSWLPLWFGNQHVDDDENPVYGTARVLAAYADEERRTTPQAEQAIQFMQSVQNPDGGWGGAEGAPSSVEETALAVDALLS 753
            NLATW TTLSVNAL    SE ++  +RDWL++QQY E+HPYT A+PGGWAWTDLPGGVPDADDTPGA+LAL+ L+  E+    P+ +  +L+ GV WLLDLQN NGGWPTFCRGWG LPFD+S AD++AHVLRAL  WL   A+   S  L  RAT+AI +G++YLA  QR DGSWLPLWFGNQ   DDENPVYGT+RVLAAY D     +  A+ A+ F++S QN DGGWGG  G PSS EET+LA + LLS
Sbjct:  280 NLATWVTTLSVNALGDVFSEEDRDAVRDWLLEQQYREVHPYTNADPGGWAWTDLPGGVPDADDTPGALLALMTLRATEA---PPQREHDALKAGVVWLLDLQNGNGGWPTFCRGWGALPFDRSGADLTAHVLRALRRWLDHPASDYSSQALHRRATRAIAQGFRYLARTQREDGSWLPLWFGNQLSPDDENPVYGTSRVLAAYRDCGELASEPAQSALSFLESAQNDDGGWGGTCGTPSSNEETSLASEILLS 529          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90599.21010.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517WID3_9PLAN1.560e-18096.58Squalene--hopene cyclase n=6 Tax=Gimesia TaxID=164... [more]
A0A518FUR4_9PLAN2.140e-16085.93Squalene--hopene cyclase n=3 Tax=Gimesia panareens... [more]
A0A517RKW6_9PLAN1.120e-14276.52Squalene--hopene cyclase n=2 Tax=Gimesia TaxID=164... [more]
A0A2E2BZI0_9PLAN1.590e-14277.27Squalene--hopene cyclase n=5 Tax=Planctomycetaceae... [more]
A0A517VJA7_9PLAN4.500e-14277.65Squalene--hopene cyclase n=6 Tax=Planctomycetaceae... [more]
A0A517VSR8_9PLAN5.850e-14076.92Squalene--hopene cyclase n=2 Tax=Gimesia aquarii T... [more]
A0A350KJE5_9PLAN3.580e-13977.65Squalene--hopene cyclase (Fragment) n=1 Tax=Planct... [more]
A0A3C0AG37_9PLAN1.040e-11275.12Squalene--hopene cyclase (Fragment) n=1 Tax=Planct... [more]
A0A517ZV94_9PLAN2.180e-11066.53Sporulenol synthase n=4 Tax=Symmachiella TaxID=279... [more]
A0A2D6SUE9_9PLAN1.870e-10363.24Squalene--hopene cyclase n=1 Tax=Planctomycetaceae... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90599contigM-pyrifera_M_contig90599:2..790 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score416.8
Seed ortholog evalue7.7e-114
Seed eggNOG ortholog344747.PM8797T_19949
KEGG rclassRC01850,RC01851
KEGG koko:K06045
KEGG ReactionR07322,R07323
KEGG Pathwayko00909,ko01110,map00909,map01110
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Squalene--hopene cyclase
EggNOG OGs2IYN1@203682,COG1657@1,COG1657@2
EC4.2.1.129,5.4.99.17
COG Functional cat.I
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size789
Cds size789
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816818.1447928-CDS-M-pyrifera_M_contig90599:1..7901622816818.1447928-CDS-M-pyrifera_M_contig90599:1..790Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90599 2..790 +
1692278196.3074653-CDS-M-pyrifera_M_contig90599:1..7901692278196.3074653-CDS-M-pyrifera_M_contig90599:1..790Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90599 2..790 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90599.21010.1prot_M-pyrifera_M_contig90599.21010.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90599 2..790 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90599.21010.1

>prot_M-pyrifera_M_contig90599.21010.1 ID=prot_M-pyrifera_M_contig90599.21010.1|Name=mRNA_M-pyrifera_M_contig90599.21010.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=263bp
NLATWTTTLSVNALEGTLSEFEKAPIRDWLIQQQYTELHPYTAAEPGGWA
WTDLPGGVPDADDTPGAILALLNLQTEESDEVSPELQTSLRNGVNWLLDL
QNSNGGWPTFCRGWGTLPFDQSAADISAHVLRALEAWLKTDATAEESTLR
TRATQAIERGYKYLAAQQRPDGSWLPLWFGNQHVDDDENPVYGTARVLAA
YADEERRTTPQAEQAIQFMQSVQNPDGGWGGAEGAPSSVEETALAVDALL
SVGLSLENPCLQQ
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mRNA from alignment at M-pyrifera_M_contig90599:2..790+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90599.21010.1 ID=mRNA_M-pyrifera_M_contig90599.21010.1|Name=mRNA_M-pyrifera_M_contig90599.21010.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=789bp|location=Sequence derived from alignment at M-pyrifera_M_contig90599:2..790+ (Macrocystis pyrifera P11B4 male)
AACCTCGCCACCTGGACGACCACGCTGTCCGTCAACGCCCTGGAAGGCAC ACTCTCGGAATTCGAAAAAGCACCGATCCGCGACTGGCTGATTCAGCAGC AATACACCGAACTTCATCCCTATACCGCAGCCGAACCGGGAGGCTGGGCC TGGACCGATCTGCCCGGCGGCGTACCCGATGCCGACGATACCCCCGGCGC TATCCTCGCTCTGTTGAACCTGCAGACAGAGGAATCCGATGAAGTGTCAC CCGAATTGCAGACCTCTCTGCGGAACGGCGTCAATTGGCTGCTCGATCTG CAGAACTCCAACGGCGGCTGGCCTACTTTCTGTCGCGGCTGGGGGACGCT CCCCTTCGATCAAAGTGCCGCAGACATCTCGGCACACGTCCTGCGGGCGC TGGAAGCCTGGCTCAAAACGGATGCAACAGCCGAAGAGAGCACTCTACGC ACTCGGGCTACCCAGGCCATCGAACGCGGCTATAAATACCTCGCCGCCCA ACAGAGGCCCGACGGTTCCTGGCTGCCACTCTGGTTCGGGAATCAGCATG TCGATGATGACGAGAACCCGGTCTACGGGACGGCACGCGTGCTGGCTGCC TACGCAGACGAAGAACGTCGTACAACGCCCCAGGCGGAACAGGCCATCCA GTTTATGCAAAGCGTACAGAATCCCGATGGTGGCTGGGGCGGCGCGGAAG GCGCACCGTCCAGCGTGGAAGAGACAGCGCTCGCCGTCGATGCTCTGCTA TCCGTGGGGCTTTCGCTGGAGAATCCCTGCCTGCAACAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig90599:2..790+

>mRNA_M-pyrifera_M_contig90599.21010.1 ID=mRNA_M-pyrifera_M_contig90599.21010.1|Name=mRNA_M-pyrifera_M_contig90599.21010.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1578bp|location=Sequence derived from alignment at M-pyrifera_M_contig90599:2..790+ (Macrocystis pyrifera P11B4 male)
AACCTCGCCACCTGGACGACCACGCTGTCCGTCAACGCCCTGGAAGGCAC
ACTCTCGGAATTCGAAAAAGCACCGATCCGCGACTGGCTGATTCAGCAGC
AATACACCGAACTTCATCCCTATACCGCAGCCGAACCGGGAGGCTGGGCC
TGGACCGATCTGCCCGGCGGCGTACCCGATGCCGACGATACCCCCGGCGC
TATCCTCGCTCTGTTGAACCTGCAGACAGAGGAATCCGATGAAGTGTCAC
CCGAATTGCAGACCTCTCTGCGGAACGGCGTCAATTGGCTGCTCGATCTG
CAGAACTCCAACGGCGGCTGGCCTACTTTCTGTCGCGGCTGGGGGACGCT
CCCCTTCGATCAAAGTGCCGCAGACATCTCGGCACACGTCCTGCGGGCGC
TGGAAGCCTGGCTCAAAACGGATGCAACAGCCGAAGAGAGCACTCTACGC
ACTCGGGCTACCCAGGCCATCGAACGCGGCTATAAATACCTCGCCGCCCA
ACAGAGGCCCGACGGTTCCTGGCTGCCACTCTGGTTCGGGAATCAGCATG
TCGATGATGACGAGAACCCGGTCTACGGGACGGCACGCGTGCTGGCTGCC
TACGCAGACGAAGAACGTCGTACAACGCCCCAGGCGGAACAGGCCATCCA
GTTTATGCAAAGCGTACAGAATCCCGATGGTGGCTGGGGCGGCGCGGAAG
GCGCACCGTCCAGCGTGGAAGAGACAGCGCTCGCCGTCGATGCTCTGCTA
TCCGTGGGGCTTTCGCTGGAGAATCCCTGCCTGCAACAGAACCTCGCCAC
CTGGACGACCACGCTGTCCGTCAACGCCCTGGAAGGCACACTCTCGGAAT
TCGAAAAAGCACCGATCCGCGACTGGCTGATTCAGCAGCAATACACCGAA
CTTCATCCCTATACCGCAGCCGAACCGGGAGGCTGGGCCTGGACCGATCT
GCCCGGCGGCGTACCCGATGCCGACGATACCCCCGGCGCTATCCTCGCTC
TGTTGAACCTGCAGACAGAGGAATCCGATGAAGTGTCACCCGAATTGCAG
ACCTCTCTGCGGAACGGCGTCAATTGGCTGCTCGATCTGCAGAACTCCAA
CGGCGGCTGGCCTACTTTCTGTCGCGGCTGGGGGACGCTCCCCTTCGATC
AAAGTGCCGCAGACATCTCGGCACACGTCCTGCGGGCGCTGGAAGCCTGG
CTCAAAACGGATGCAACAGCCGAAGAGAGCACTCTACGCACTCGGGCTAC
CCAGGCCATCGAACGCGGCTATAAATACCTCGCCGCCCAACAGAGGCCCG
ACGGTTCCTGGCTGCCACTCTGGTTCGGGAATCAGCATGTCGATGATGAC
GAGAACCCGGTCTACGGGACGGCACGCGTGCTGGCTGCCTACGCAGACGA
AGAACGTCGTACAACGCCCCAGGCGGAACAGGCCATCCAGTTTATGCAAA
GCGTACAGAATCCCGATGGTGGCTGGGGCGGCGCGGAAGGCGCACCGTCC
AGCGTGGAAGAGACAGCGCTCGCCGTCGATGCTCTGCTATCCGTGGGGCT
TTCGCTGGAGAATCCCTGCCTGCAACAG
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