mRNA_M-pyrifera_M_contig90519.20987.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90519.20987.1
Unique NamemRNA_M-pyrifera_M_contig90519.20987.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig90519.20987.1 vs. uniprot
Match: A0A7S3XUS5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUS5_HETAK)

HSP 1 Score: 315 bits (806), Expect = 2.390e-102
Identity = 156/230 (67.83%), Postives = 183/230 (79.57%), Query Frame = 1 
Query:    1 DEADRMLDMGFEEQIRHIIQEVDMPVERQTLMFSATFPREIQKLAADFLREYVFLAVGRLGGVASDITQKVMYVDERDKPEQLMKLLNDVEEGLILVFVETKRGADALCHQLMRARYPVTAIHGDRDQREREEALESFKTGRTPILVATDVASRGLDISNVSHVFNFDLPSACEDYVHRIGRTGRVGNTGIAISFFNEKNRNIARDLYDLLVESKQEVPPWLGSMTSGRG 690
            DEADRMLDMGFE QIR I+++ DMP ERQT MFSATFPREIQ+LAADF+R YVFL VGR+G  + D+TQ+V YV+E +K + LM+ L  VEEGLILVFVETKR AD + H L +  +P  +IHGD+ QRERE AL +FK GR PILVATDVA+RGLDISNV+ V NFDLP+  +DYVHRIGRTG   N G A++F NEKNRNIARDLYD+L E+ QEVP WLGSM S  G
Sbjct:  234 DEADRMLDMGFEPQIRRIVEQEDMPRERQTFMFSATFPREIQRLAADFMRNYVFLTVGRVGSASKDVTQRVEYVEEHEKLDHLMRFLQGVEEGLILVFVETKRSADHIEHMLYKEGFPAASIHGDKTQREREGALANFKNGRCPILVATDVAARGLDISNVTQVINFDLPTNIDDYVHRIGRTGXXXNVGNALAFMNEKNRNIARDLYDMLSENDQEVPQWLGSMVSYGG 463
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BLAST of mRNA_M-pyrifera_M_contig90519.20987.1 vs. uniprot
Match: H3G780_PHYRM (RNA helicase n=3 Tax=Phytophthora TaxID=4783 RepID=H3G780_PHYRM)

HSP 1 Score: 310 bits (795), Expect = 6.780e-101
Identity = 150/227 (66.08%), Postives = 184/227 (81.06%), Query Frame = 1 
Query:    1 DEADRMLDMGFEEQIRHIIQEVDMPVERQTLMFSATFPREIQKLAADFLREYVFLAVGRLGGVASDITQKVMYVDERDKPEQLMKLLNDVEEGLILVFVETKRGADALCHQLMRARYPVTAIHGDRDQREREEALESFKTGRTPILVATDVASRGLDISNVSHVFNFDLPSACEDYVHRIGRTGRVGNTGIAISFFNEKNRNIARDLYDLLVESKQEVPPWLGSMTS 681
            DEADRMLDMGFE QIR I+++ DMP ERQT MFSATFPREIQ+LA+DFLR+Y+FL VGR+G  + D+ Q V Y+++ DK + L++ LN V++GLILVFVETKRGAD L   L R  +P T+IHGDR QRERE+AL SFK+GRTP+LVATDVA+RGLDI  V+ V NFDLP+  +DYVHRIGRTGRVGN G A+S  NEKNRNIAR++YDL+ E+ QE+P +L  M S
Sbjct:  202 DEADRMLDMGFEPQIRRIVEQEDMPRERQTFMFSATFPREIQRLASDFLRDYIFLTVGRVGSASKDVKQTVEYIEQYDKEDYLVRFLNQVQDGLILVFVETKRGADFLEDMLCREGFPATSIHGDRTQREREQALASFKSGRTPVLVATDVAARGLDIDGVTQVINFDLPNNIDDYVHRIGRTGRVGNVGYALSMMNEKNRNIAREMYDLMTENGQEIPAFLDQMAS 428
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BLAST of mRNA_M-pyrifera_M_contig90519.20987.1 vs. uniprot
Match: A0A5A8D3L3_CAFRO (RNA helicase n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D3L3_CAFRO)

HSP 1 Score: 311 bits (798), Expect = 5.700e-99
Identity = 158/231 (68.40%), Postives = 189/231 (81.82%), Query Frame = 1 
Query:    1 DEADRMLDMGFEEQIRHIIQEVDMPVERQTLMFSATFPREIQKLAADFLRE-YVFLAVGRLGGVASDITQKVMYVDERDKPEQLMKLLNDVEEGLILVFVETKRGADALCHQLMRARYPVTAIHGDRDQREREEALESFKTGRTPILVATDVASRGLDISNVSHVFNFDLPSACEDYVHRIGRTGRVGNTGIAISFFNEKNRNIARDLYDLLVESKQEVPPWLGSMTSGRG 690
            DEADRMLDMGFE QIR ++QE DM  ERQT MFSATFP EIQ+LA+DFL + Y+FLAVGR+G  ASDI Q V +V++ +K  +L+  LN + +GL+LVF ETKRGAD L +QL   R+P T+IHGDR QREREEAL SFK+G TPILVATDVA+RGLDISNV+HV N D+PS  +DYVHRIGRTGRVGNTG+AISF N++NRNIAR+LYDLLVE KQE+P +L +M  G G
Sbjct:  338 DEADRMLDMGFEPQIRTVVQERDMTRERQTFMFSATFPDEIQRLASDFLHDGYIFLAVGRVGSAASDIIQTVEFVEDGEKLPRLIAHLNGIPDGLVLVFCETKRGADFLEYQLRENRFPATSIHGDRTQREREEALHSFKSGATPILVATDVAARGLDISNVTHVINHDMPSNIDDYVHRIGRTGRVGNTGVAISFMNDRNRNIARELYDLLVEGKQELPSFLSAMGRGGG 568
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BLAST of mRNA_M-pyrifera_M_contig90519.20987.1 vs. uniprot
Match: A0A3F2RJB6_9STRA (RNA helicase n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJB6_9STRA)

HSP 1 Score: 307 bits (786), Expect = 6.260e-99
Identity = 169/261 (64.75%), Postives = 205/261 (78.54%), Query Frame = 1 
Query:    1 DEADRMLDMGFEEQIRHIIQEVDMPVERQTLMFSATFPREIQKLAADFLREYVFLAVGRLGGVASDITQKVMYVDERDKPEQLMKLLNDVEEGLILVFVETKRGADALCHQLMRARYPVTAIHGDRDQREREEALESFKTGRTPILVATDVASRGLDISNVSHVFNFDLPSACEDYVHRIGRTGRVGNTGIAISFFNEKNRNIARDLYDLLVESKQEVPPWLGSMTSGRGXXXXXXXXXXXXXXXXXXXXXRFGGHDIRRE 783
            DEADRMLDMGFE QIR I+++ DMP ERQT MFSATFPREIQ+LA+DFLR+Y+FL VGR+G  + D+ Q V Y+++ DK + L++ LN V++GLILVFVETKRGAD L   L R  +P T+IHGDR QRERE AL SFK+GRTP+LVATDVA+RGLDI  V+ V NFDLP+  +DYVHRIGRTGRVGN G A+S  N+KNRNIAR++Y+L+ E+ QEVP +L  + +  G     XXXXXXXXXXXXXXX RFG  D R E
Sbjct:  180 DEADRMLDMGFEPQIRRIVEQEDMPRERQTFMFSATFPREIQRLASDFLRDYIFLTVGRVGSASKDVKQTVEYIEQYDKEDYLVRFLNQVQDGLILVFVETKRGADFLEDMLCREGFPATSIHGDRSQREREAALASFKSGRTPVLVATDVAARGLDIDGVTQVINFDLPNNIDDYVHRIGRTGRVGNIGYALSMMNDKNRNIAREMYELMAENGQEVPAFLDQLANS-GFRGGSXXXXXXXXXXXXXXXSRFGARDFRSE 439
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BLAST of mRNA_M-pyrifera_M_contig90519.20987.1 vs. uniprot
Match: A0A024G0V6_9STRA (RNA helicase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G0V6_9STRA)

HSP 1 Score: 308 bits (788), Expect = 9.080e-99
Identity = 147/227 (64.76%), Postives = 183/227 (80.62%), Query Frame = 1 
Query:    1 DEADRMLDMGFEEQIRHIIQEVDMPVERQTLMFSATFPREIQKLAADFLREYVFLAVGRLGGVASDITQKVMYVDERDKPEQLMKLLNDVEEGLILVFVETKRGADALCHQLMRARYPVTAIHGDRDQREREEALESFKTGRTPILVATDVASRGLDISNVSHVFNFDLPSACEDYVHRIGRTGRVGNTGIAISFFNEKNRNIARDLYDLLVESKQEVPPWLGSMTS 681
            DEADRMLDMGFE QIR ++++ DMP ERQT MFSATFPRE+Q+LAADFL++Y+FL VGR+G  + D+ Q++ +++  DK + L++ LN V+EGLILVFVETKRGAD L H L R  +P T+IHGDR QRERE AL SF++GRTP+LVATDVA+RGLDI+ V+HV NFDLP+  +DYVHRIGRTGR GN G A+S   +KNRNIAR+LY LLVE+ QE P WL  M +
Sbjct:  231 DEADRMLDMGFEPQIRRLVEQEDMPRERQTFMFSATFPREMQRLAADFLQDYIFLTVGRVGSASKDVKQQIEFIEPHDKEDYLVRFLNQVQEGLILVFVETKRGADYLEHLLCREGFPATSIHGDRTQREREAALNSFRSGRTPVLVATDVAARGLDINGVTHVINFDLPNNIDDYVHRIGRTGRAGNLGHALSMMTDKNRNIARELYALLVENSQECPSWLDQMAN 457
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BLAST of mRNA_M-pyrifera_M_contig90519.20987.1 vs. uniprot
Match: A0A662X272_9STRA (RNA helicase n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X272_9STRA)

HSP 1 Score: 310 bits (793), Expect = 1.930e-98
Identity = 172/262 (65.65%), Postives = 207/262 (79.01%), Query Frame = 1 
Query:    1 DEADRMLDMGFEEQIRHIIQEVDMPVERQTLMFSATFPREIQKLAADFLREYVFLAVGRLGGVASDITQKVMYVDERDKPEQLMKLLNDVEEGLILVFVETKRGADALCHQLMRARYPVTAIHGDRDQREREEALESFKTGRTPILVATDVASRGLDISNVSHVFNFDLPSACEDYVHRIGRTGRVGNTGIAISFFNEKNRNIARDLYDLLVESKQEVPPWLGSMT-SGRGXXXXXXXXXXXXXXXXXXXXXRFGGHDIRRE 783
            DEADRMLDMGFE QIR I+++ DMP ERQT MFSATFPREIQ+LA+DFLR+Y+FL VGR+G  + D+ Q V Y+++ DK + L++ LN V++GLILVFVETKRGAD L   L R  +P T+IHGDR QRERE AL SFK+GRTP+LVATDVA+RGLDI  V+ V NFDLP+  +DYVHRIGRTGRVGN G A+S  NEKNRNIAR++YD++VE+ QE+P +L  M  SG     XXXXXXXXXXXXXXXX  RFG  D R +
Sbjct:  329 DEADRMLDMGFEPQIRRIVEQEDMPRERQTFMFSATFPREIQRLASDFLRDYIFLTVGRVGSASKDVKQTVEYIEQYDKEDYLVRFLNQVQDGLILVFVETKRGADFLEDMLCREGFPATSIHGDRSQREREAALASFKSGRTPVLVATDVAARGLDIDGVTQVINFDLPNNIDDYVHRIGRTGRVGNIGYALSMMNEKNRNIAREMYDMMVENGQEIPAFLDQMANSGYRGGGXXXXXXXXXXXXXXXXGSRFGARDFRSD 590
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BLAST of mRNA_M-pyrifera_M_contig90519.20987.1 vs. uniprot
Match: A0A077SR11_9METZ (Pl10 B SciPl10B (Fragment) n=1 Tax=Sycon ciliatum TaxID=27933 RepID=A0A077SR11_9METZ)

HSP 1 Score: 303 bits (776), Expect = 5.280e-98
Identity = 156/235 (66.38%), Postives = 185/235 (78.72%), Query Frame = 1 
Query:    1 DEADRMLDMGFEEQIRHIIQEVDMPV--ERQTLMFSATFPREIQKLAADFLREYVFLAVGRLGGVASDITQKVMYVDERDKPEQLMKLLNDVEEG-------LILVFVETKRGADALCHQLMRARYPVTAIHGDRDQREREEALESFKTGRTPILVATDVASRGLDISNVSHVFNFDLPSACEDYVHRIGRTGRVGNTGIAISFFNEKNRNIARDLYDLLVESKQEVPPWLGSMT 678
            DEADRMLDMGFE QIR I+++  MP   +RQTLMFSATFP+EIQ LA DFL +YVFLAVGR+G  + +ITQKV++VDE DK   L+ LLN    G       L LVFVET++GADAL H L   RYP T+IHGDR QRERE +L +F+ GRTPILVAT VA+RGLDI NV HV NFD+P+  E+YVHRIGRTGRVGN G+A SFFNEKNRNIARDL++LLVESKQE+P W+ S++
Sbjct:  221 DEADRMLDMGFEPQIRQIVEDKSMPSTKDRQTLMFSATFPKEIQMLARDFLNDYVFLAVGRVGSTSENITQKVVWVDEADKRSFLLDLLNATGNGDMTGPRALTLVFVETRKGADALEHFLYSERYPATSIHGDRSQREREHSLATFRDGRTPILVATAVAARGLDIPNVKHVVNFDMPNDIEEYVHRIGRTGRVGNLGLATSFFNEKNRNIARDLHELLVESKQEIPTWIESLS 455
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BLAST of mRNA_M-pyrifera_M_contig90519.20987.1 vs. uniprot
Match: K3WTV7_GLOUD (RNA helicase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTV7_GLOUD)

HSP 1 Score: 308 bits (789), Expect = 8.880e-98
Identity = 161/263 (61.22%), Postives = 198/263 (75.29%), Query Frame = 1 
Query:    1 DEADRMLDMGFEEQIRHIIQEVDMPVERQTLMFSATFPREIQKLAADFLREYVFLAVGRLGGVASDITQKVMYVDERDKPEQLMKLLNDVEEGLILVFVETKRGADALCHQLMRARYPVTAIHGDRDQREREEALESFKTGRTPILVATDVASRGLDISNVSHVFNFDLPSACEDYVHRIGRTGRVGNTGIAISFFNEKNRNIARDLYDLLVESKQEVPPWLGSMTSG--RGXXXXXXXXXXXXXXXXXXXXXRFGGHDIRRE 783
            DEADRMLDMGFE QIR I+++ DMP ERQT MFSATFPREIQ+LA+DFL++Y+FL VGR+G  + D+ Q V Y+++ DK + L++ LN V++GLILVFVETKR AD L   L R  +P T+IHGDR QRERE+AL SF++GRTP+LVATDVA+RGLDI+ V+ V N+DLPS  +DYVHRIGRTGRVGN G A+S  N+KNRNIAR+LY+LLVE+ QE P WL  M +   RG      XXXXX          RFG  D RR+
Sbjct:  335 DEADRMLDMGFEPQIRRIVEQEDMPRERQTFMFSATFPREIQRLASDFLQDYIFLTVGRVGSASKDVKQSVEYIEQYDKEDYLIRFLNQVQDGLILVFVETKRNADFLEDLLCREGFPATSIHGDRTQREREQALASFRSGRTPVLVATDVAARGLDINGVTQVINYDLPSNIDDYVHRIGRTGRVGNVGFALSMMNDKNRNIARELYELLVENGQECPAWLDQMANSGFRGGGGGRGXXXXXGSS-------RFGARDFRRD 590
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BLAST of mRNA_M-pyrifera_M_contig90519.20987.1 vs. uniprot
Match: A0A8K1CKB8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKB8_PYTOL)

HSP 1 Score: 308 bits (788), Expect = 1.220e-97
Identity = 169/263 (64.26%), Postives = 206/263 (78.33%), Query Frame = 1 
Query:    1 DEADRMLDMGFEEQIRHIIQEVDMPVERQTLMFSATFPREIQKLAADFLREYVFLAVGRLGGVASDITQKVMYVDERDKPEQLMKLLNDVEEGLILVFVETKRGADALCHQLMRARYPVTAIHGDRDQREREEALESFKTGRTPILVATDVASRGLDISNVSHVFNFDLPSACEDYVHRIGRTGRVGNTGIAISFFNEKNRNIARDLYDLLVESKQEVPPWLGSMTSG--RGXXXXXXXXXXXXXXXXXXXXXRFGGHDIRRE 783
            DEADRMLDMGFE QIR I+++ DMP ERQT MFSATFPREIQ+LA+DFL++Y+FL VGR+G  + D+ Q++ YV++ DK + L++ LN V++GLIL+FVETKRGAD L   L R  +P T+IHGDR QRERE AL SF+TGRTP+LVATDVA+RGLDIS V+ V NFD+PS  +DYVHRIGRTGRVGN G A+S  N+KNRNIAR+LY+L+VE+ QE P WL  M +   RG  XXXXXXXXXXXX       RFG  D RR+
Sbjct:  338 DEADRMLDMGFEPQIRRIVEQEDMPRERQTFMFSATFPREIQRLASDFLQDYIFLTVGRVGSASKDVKQQLEYVEQYDKEDFLIRFLNQVQDGLILIFVETKRGADFLEDLLCREGFPATSIHGDRSQREREAALASFRTGRTPVLVATDVAARGLDISGVTQVINFDMPSNIDDYVHRIGRTGRVGNIGHALSMVNDKNRNIARELYELVVENGQECPRWLDEMVNSGYRGGGXXXXXXXXXXXXGS-----RFGARDFRRD 595
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BLAST of mRNA_M-pyrifera_M_contig90519.20987.1 vs. uniprot
Match: D0MXE0_PHYIT (RNA helicase n=20 Tax=Peronosporaceae TaxID=4777 RepID=D0MXE0_PHYIT)

HSP 1 Score: 306 bits (784), Expect = 4.370e-97
Identity = 148/227 (65.20%), Postives = 183/227 (80.62%), Query Frame = 1 
Query:    1 DEADRMLDMGFEEQIRHIIQEVDMPVERQTLMFSATFPREIQKLAADFLREYVFLAVGRLGGVASDITQKVMYVDERDKPEQLMKLLNDVEEGLILVFVETKRGADALCHQLMRARYPVTAIHGDRDQREREEALESFKTGRTPILVATDVASRGLDISNVSHVFNFDLPSACEDYVHRIGRTGRVGNTGIAISFFNEKNRNIARDLYDLLVESKQEVPPWLGSMTS 681
            DEADRMLDMGFE QIR I+++ DMP ERQT MFSATFP EIQ+LA+DFLR+Y+FL VGR+G  + D+ Q V Y+++ DK + L++ LN V++GLILVFVETKRGAD L   L R  +P T+IHGDR QRERE+AL SFK+GRTP+LVATDVA+RGLDI  V+ V NFDLP+  +DYVHRIGRTGRVGN G A+S  NEKNRNIAR++Y+L+ E+ QE+P +L  M S
Sbjct:  327 DEADRMLDMGFEPQIRRIVEQEDMPRERQTFMFSATFPCEIQRLASDFLRDYIFLTVGRVGSASKDVKQTVEYIEQYDKEDYLVRFLNQVQDGLILVFVETKRGADFLEDMLCREGFPATSIHGDRSQREREQALASFKSGRTPVLVATDVAARGLDIDGVTQVINFDLPNNIDDYVHRIGRTGRVGNVGYALSMMNEKNRNIAREMYELMAENGQEIPAFLDQMAS 553
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90519.20987.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3XUS5_HETAK2.390e-10267.83Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
H3G780_PHYRM6.780e-10166.08RNA helicase n=3 Tax=Phytophthora TaxID=4783 RepID... [more]
A0A5A8D3L3_CAFRO5.700e-9968.40RNA helicase n=2 Tax=Cafeteria roenbergensis TaxID... [more]
A0A3F2RJB6_9STRA6.260e-9964.75RNA helicase n=2 Tax=Phytophthora kernoviae TaxID=... [more]
A0A024G0V6_9STRA9.080e-9964.76RNA helicase n=1 Tax=Albugo candida TaxID=65357 Re... [more]
A0A662X272_9STRA1.930e-9865.65RNA helicase n=1 Tax=Nothophytophthora sp. Chile5 ... [more]
A0A077SR11_9METZ5.280e-9866.38Pl10 B SciPl10B (Fragment) n=1 Tax=Sycon ciliatum ... [more]
K3WTV7_GLOUD8.880e-9861.22RNA helicase n=1 Tax=Globisporangium ultimum (stra... [more]
A0A8K1CKB8_PYTOL1.220e-9764.26Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
D0MXE0_PHYIT4.370e-9765.20RNA helicase n=20 Tax=Peronosporaceae TaxID=4777 R... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90519contigM-pyrifera_M_contig90519:8..790 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score305.1
Seed ortholog evalue3.2e-80
Seed eggNOG ortholog42099.EPrPV00000024339
Preferred nameDDX3X
KEGG koko:K10268,ko:K11594,ko:K17642
KEGG Pathwayko04622,ko05161,ko05203,map04622,map05161,map05203
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000070,GO:0000278,GO:0000280,GO:0000375,GO:0000377,GO:0000390,GO:0000398,GO:0000819,GO:0001558,GO:0001775,GO:0001817,GO:0001819,GO:0001932,GO:0001934,GO:0002164,GO:0002165,GO:0002168,GO:0002181,GO:0002183,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003723,GO:0003724,GO:0003725,GO:0003727,GO:0003729,GO:0003743,GO:0003824,GO:0003924,GO:0004003,GO:0004004,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005777,GO:0005829,GO:0005886,GO:0006139,GO:0006355,GO:0006357,GO:0006396,GO:0006397,GO:0006412,GO:0006413,GO:0006417,GO:0006446,GO:0006518,GO:0006725,GO:0006807,GO:0006810,GO:0006887,GO:0006915,GO:0006950,GO:0006952,GO:0006955,GO:0006970,GO:0006996,GO:0007049,GO:0007059,GO:0007154,GO:0007165,GO:0007166,GO:0007267,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007346,GO:0007431,GO:0007435,GO:0007552,GO:0008026,GO:0008047,GO:0008094,GO:0008104,GO:0008134,GO:0008135,GO:0008143,GO:0008150,GO:0008152,GO:0008186,GO:0008190,GO:0008219,GO:0008380,GO:0008625,GO:0009058,GO:0009059,GO:0009605,GO:0009607,GO:0009615,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009791,GO:0009886,GO:0009887,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010466,GO:0010467,GO:0010468,GO:0010494,GO:0010501,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010564,GO:0010604,GO:0010605,GO:0010608,GO:0010623,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0010941,GO:0010942,GO:0010950,GO:0010951,GO:0010952,GO:0012501,GO:0012502,GO:0012505,GO:0014070,GO:0016020,GO:0016043,GO:0016055,GO:0016070,GO:0016071,GO:0016192,GO:0016246,GO:0016441,GO:0016442,GO:0016458,GO:0016462,GO:0016604,GO:0016607,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017148,GO:0019207,GO:0019209,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019827,GO:0019867,GO:0019887,GO:0019953,GO:0022402,GO:0022411,GO:0022412,GO:0022414,GO:0022607,GO:0022612,GO:0022613,GO:0022618,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030111,GO:0030141,GO:0030154,GO:0030162,GO:0030177,GO:0030234,GO:0030295,GO:0030307,GO:0030308,GO:0030718,GO:0031047,GO:0031090,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031332,GO:0031333,GO:0031369,GO:0031399,GO:0031401,GO:0031410,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0031983,GO:0032147,GO:0032268,GO:0032269,GO:0032270,GO:0032392,GO:0032479,GO:0032481,GO:0032501,GO:0032502,GO:0032504,GO:0032508,GO:0032642,GO:0032648,GO:0032722,GO:0032728,GO:0032940,GO:0032984,GO:0032988,GO:0032991,GO:0033036,GO:0033365,GO:0033554,GO:0033592,GO:0033674,GO:0033993,GO:0034063,GO:0034248,GO:0034249,GO:0034250,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034774,GO:0035070,GO:0035071,GO:0035072,GO:0035075,GO:0035078,GO:0035081,GO:0035194,GO:0035272,GO:0035556,GO:0035613,GO:0035770,GO:0036098,GO:0036230,GO:0036314,GO:0036464,GO:0036477,GO:0040008,GO:0040029,GO:0042119,GO:0042221,GO:0042254,GO:0042255,GO:0042256,GO:0042325,GO:0042327,GO:0042579,GO:0042623,GO:0042981,GO:0043021,GO:0043024,GO:0043025,GO:0043043,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043086,GO:0043154,GO:0043170,GO:0043186,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043273,GO:0043280,GO:0043281,GO:0043299,GO:0043312,GO:0043539,GO:0043549,GO:0043603,GO:0043604,GO:0043900,GO:0043902,GO:0043903,GO:0043933,GO:0044085,GO:0044087,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044297,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044433,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044703,GO:0044877,GO:0045055,GO:0045069,GO:0045070,GO:0045087,GO:0045321,GO:0045495,GO:0045727,GO:0045787,GO:0045859,GO:0045860,GO:0045861,GO:0045862,GO:0045893,GO:0045926,GO:0045927,GO:0045931,GO:0045935,GO:0045937,GO:0045944,GO:0045948,GO:0046483,GO:0046677,GO:0046685,GO:0046903,GO:0048027,GO:0048102,GO:0048232,GO:0048285,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048524,GO:0048583,GO:0048584,GO:0048585,GO:0048609,GO:0048707,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050792,GO:0050794,GO:0050896,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051254,GO:0051276,GO:0051336,GO:0051338,GO:0051345,GO:0051346,GO:0051347,GO:0051641,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0052547,GO:0052548,GO:0060033,GO:0060205,GO:0060255,GO:0060293,GO:0060548,GO:0060828,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0070035,GO:0070717,GO:0070727,GO:0070887,GO:0070925,GO:0071103,GO:0071214,GO:0071236,GO:0071243,GO:0071310,GO:0071396,GO:0071470,GO:0071649,GO:0071651,GO:0071704,GO:0071826,GO:0071840,GO:0071900,GO:0071902,GO:0071944,GO:0080090,GO:0090068,GO:0090263,GO:0090304,GO:0097159,GO:0097190,GO:0097191,GO:0097193,GO:0097305,GO:0097306,GO:0097307,GO:0097308,GO:0097458,GO:0097617,GO:0097708,GO:0098588,GO:0098727,GO:0098772,GO:0098805,GO:0098813,GO:0099503,GO:0101002,GO:0104004,GO:0140014,GO:0140097,GO:0140098,GO:0198738,GO:1900087,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901654,GO:1901700,GO:1901701,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902531,GO:1902532,GO:1902680,GO:1902806,GO:1902808,GO:1903047,GO:1903506,GO:1903508,GO:1903608,GO:1903900,GO:1903902,GO:1904813,GO:1905114,GO:1990904,GO:2000045,GO:2000112,GO:2000113,GO:2000116,GO:2000117,GO:2001056,GO:2001141,GO:2001233,GO:2001234,GO:2001242,GO:2001243
EggNOG free text desc.DEAD DEAH box RNA helicase. Source PGD
EggNOG OGs1MDT2@121069,COG0513@1,KOG0335@2759
EC3.6.4.13
COG Functional cat.A
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03019,ko03036,ko03041,ko04121
Exons1
Model size783
Cds size768
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816817.1171753-CDS-M-pyrifera_M_contig90519:7..7751622816817.1171753-CDS-M-pyrifera_M_contig90519:7..775Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90519 8..775 -
1692278195.683139-CDS-M-pyrifera_M_contig90519:7..7751692278195.683139-CDS-M-pyrifera_M_contig90519:7..775Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90519 8..775 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816817.1296222-UTR-M-pyrifera_M_contig90519:775..7901622816817.1296222-UTR-M-pyrifera_M_contig90519:775..790Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig90519 776..790 -
1692278195.710343-UTR-M-pyrifera_M_contig90519:775..7901692278195.710343-UTR-M-pyrifera_M_contig90519:775..790Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig90519 776..790 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90519.20987.1prot_M-pyrifera_M_contig90519.20987.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90519 8..775 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90519.20987.1

>prot_M-pyrifera_M_contig90519.20987.1 ID=prot_M-pyrifera_M_contig90519.20987.1|Name=mRNA_M-pyrifera_M_contig90519.20987.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=256bp
MLDMGFEEQIRHIIQEVDMPVERQTLMFSATFPREIQKLAADFLREYVFL
AVGRLGGVASDITQKVMYVDERDKPEQLMKLLNDVEEGLILVFVETKRGA
DALCHQLMRARYPVTAIHGDRDQREREEALESFKTGRTPILVATDVASRG
LDISNVSHVFNFDLPSACEDYVHRIGRTGRVGNTGIAISFFNEKNRNIAR
DLYDLLVESKQEVPPWLGSMTSGRGGGGGGRRRGGRSKGGGGGGGGRFGG
HDIRRE
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mRNA from alignment at M-pyrifera_M_contig90519:8..790-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90519.20987.1 ID=mRNA_M-pyrifera_M_contig90519.20987.1|Name=mRNA_M-pyrifera_M_contig90519.20987.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=783bp|location=Sequence derived from alignment at M-pyrifera_M_contig90519:8..790- (Macrocystis pyrifera P11B4 male)
GACGAAGCGGATCGGATGCTTGATATGGGATTCGAGGAACAGATTCGACA
CATCATTCAAGAAGTGGATATGCCAGTGGAACGACAGACGCTCATGTTCT
CTGCCACGTTCCCTCGTGAGATCCAGAAACTTGCTGCAGACTTTCTACGA
GAGTATGTGTTCCTTGCAGTTGGTCGATTGGGTGGTGTGGCTTCTGACAT
TACGCAAAAAGTCATGTACGTCGATGAGCGTGACAAGCCTGAGCAACTGA
TGAAGCTCCTCAATGATGTGGAAGAAGGTCTCATCCTTGTCTTTGTTGAA
ACAAAACGGGGAGCAGATGCTCTTTGCCATCAATTGATGCGTGCTCGTTA
TCCTGTGACAGCCATTCACGGCGACAGAGATCAGCGTGAACGTGAAGAAG
CGTTGGAATCTTTCAAGACTGGACGTACCCCTATCCTTGTTGCCACAGAT
GTTGCATCAAGAGGTCTTGATATTTCCAACGTTTCCCATGTGTTCAACTT
TGATCTTCCAAGTGCCTGTGAAGACTATGTCCATCGTATTGGTCGAACGG
GTCGTGTGGGAAATACAGGAATTGCCATCTCCTTCTTCAACGAAAAGAAC
CGAAACATTGCACGCGATTTGTATGACCTCCTCGTTGAATCCAAACAAGA
AGTTCCTCCATGGCTTGGATCTATGACAAGTGGACGTGGTGGTGGTGGTG
GTGGACGTCGCAGAGGTGGACGAAGCAAAGGTGGTGGAGGTGGGGGTGGT
GGACGCTTCGGTGGCCATGATATTCGACGTGAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig90519:8..790-

>mRNA_M-pyrifera_M_contig90519.20987.1 ID=mRNA_M-pyrifera_M_contig90519.20987.1|Name=mRNA_M-pyrifera_M_contig90519.20987.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1536bp|location=Sequence derived from alignment at M-pyrifera_M_contig90519:8..790- (Macrocystis pyrifera P11B4 male)
ATGCTTGATATGGGATTCGAGGAACAGATTCGACACATCATTCAAGAAGT
GGATATGCCAGTGGAACGACAGACGCTCATGTTCTCTGCCACGTTCCCTC
GTGAGATCCAGAAACTTGCTGCAGACTTTCTACGAGAGTATGTGTTCCTT
GCAGTTGGTCGATTGGGTGGTGTGGCTTCTGACATTACGCAAAAAGTCAT
GTACGTCGATGAGCGTGACAAGCCTGAGCAACTGATGAAGCTCCTCAATG
ATGTGGAAGAAGGTCTCATCCTTGTCTTTGTTGAAACAAAACGGGGAGCA
GATGCTCTTTGCCATCAATTGATGCGTGCTCGTTATCCTGTGACAGCCAT
TCACGGCGACAGAGATCAGCGTGAACGTGAAGAAGCGTTGGAATCTTTCA
AGACTGGACGTACCCCTATCCTTGTTGCCACAGATGTTGCATCAAGAGGT
CTTGATATTTCCAACGTTTCCCATGTGTTCAACTTTGATCTTCCAAGTGC
CTGTGAAGACTATGTCCATCGTATTGGTCGAACGGGTCGTGTGGGAAATA
CAGGAATTGCCATCTCCTTCTTCAACGAAAAGAACCGAAACATTGCACGC
GATTTGTATGACCTCCTCGTTGAATCCAAACAAGAAGTTCCTCCATGGCT
TGGATCTATGACAAGTGGACGTGGTGGTGGTGGTGGTGGACGTCGCAGAG
GTGGACGAAGCAAAGGTGGTGGAGGTGGGGGTGGTGGACGCTTCGGTGGC
CATGATATTCGACGTGAAATGCTTGATATGGGATTCGAGGAACAGATTCG
ACACATCATTCAAGAAGTGGATATGCCAGTGGAACGACAGACGCTCATGT
TCTCTGCCACGTTCCCTCGTGAGATCCAGAAACTTGCTGCAGACTTTCTA
CGAGAGTATGTGTTCCTTGCAGTTGGTCGATTGGGTGGTGTGGCTTCTGA
CATTACGCAAAAAGTCATGTACGTCGATGAGCGTGACAAGCCTGAGCAAC
TGATGAAGCTCCTCAATGATGTGGAAGAAGGTCTCATCCTTGTCTTTGTT
GAAACAAAACGGGGAGCAGATGCTCTTTGCCATCAATTGATGCGTGCTCG
TTATCCTGTGACAGCCATTCACGGCGACAGAGATCAGCGTGAACGTGAAG
AAGCGTTGGAATCTTTCAAGACTGGACGTACCCCTATCCTTGTTGCCACA
GATGTTGCATCAAGAGGTCTTGATATTTCCAACGTTTCCCATGTGTTCAA
CTTTGATCTTCCAAGTGCCTGTGAAGACTATGTCCATCGTATTGGTCGAA
CGGGTCGTGTGGGAAATACAGGAATTGCCATCTCCTTCTTCAACGAAAAG
AACCGAAACATTGCACGCGATTTGTATGACCTCCTCGTTGAATCCAAACA
AGAAGTTCCTCCATGGCTTGGATCTATGACAAGTGGACGTGGTGGTGGTG
GTGGTGGACGTCGCAGAGGTGGACGAAGCAAAGGTGGTGGAGGTGGGGGT
GGTGGACGCTTCGGTGGCCATGATATTCGACGTGAA
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