mRNA_M-pyrifera_M_contig90496.20982.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90496.20982.1
Unique NamemRNA_M-pyrifera_M_contig90496.20982.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig90496.20982.1 vs. uniprot
Match: A0A2E3MJA6_9GAMM (Pyruvate dehydrogenase E1 component n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E3MJA6_9GAMM)

HSP 1 Score: 417 bits (1073), Expect = 1.480e-137
Identity = 195/262 (74.43%), Postives = 226/262 (86.26%), Query Frame = 1
Query:    4 YMLEKREALGGFLPQRRQKSDSIEVPDLAVFESHLKSSGEREISTTMAFVRILSTLLKQKPIKDRIVPIVPDECRTFGMEGMFRQLGIYSPHGQKYTPVDADQLMYYKEDVKGQILEEGITEAGGFCSWLAAATSYSTNNYPMLPFYIFYSMFGMQRVGDLAWAAGDMRARGFLLGGTAGRTTLAGEGLQHQDGQSLVQADIIPNCITYDPTFGFELAVIIQDGLRRMVQEQEDCFYYITVMNENYTHPDMPKGAEDGIIKG 789
            Y+ E+R+ALGG+LP RRQKS ++ VP L  F +HLK SG+REISTTMA+VRILST+LK K I   IVPIVPDE RTFGMEG+FRQ+GIYS  GQ+Y PVDADQLMYY+ED KGQ ++EGI EAGGFC+WLAA T+YS ++ PM+PFYI+YSMFG QR GD AWAAGD+RA+GF++GGTAGRTTLAGEGLQHQDG S  QA +IPNC+TYDPTFG+ELAVIIQDGLRRM  EQED FYYITVMNENY HPDMP+G EDGI+KG
Sbjct:  448 YLHERRKALGGYLPARRQKSQALTVPGLDAFANHLKGSGDREISTTMAYVRILSTILKDKQIGKHIVPIVPDESRTFGMEGLFRQIGIYSTEGQQYKPVDADQLMYYREDTKGQYMQEGINEAGGFCTWLAAGTAYSVSDCPMIPFYIYYSMFGFQRFGDFAWAAGDIRAKGFVIGGTAGRTTLAGEGLQHQDGNSHTQAGLIPNCVTYDPTFGYELAVIIQDGLRRMYHEQEDVFYYITVMNENYHHPDMPEGVEDGIVKG 709          
BLAST of mRNA_M-pyrifera_M_contig90496.20982.1 vs. uniprot
Match: A0A411HFF3_9GAMM (Pyruvate dehydrogenase E1 component n=1 Tax=Pseudolysobacter antarcticus TaxID=2511995 RepID=A0A411HFF3_9GAMM)

HSP 1 Score: 413 bits (1062), Expect = 7.540e-136
Identity = 198/263 (75.29%), Postives = 224/263 (85.17%), Query Frame = 1
Query:    1 KYMLEKREALGGFLPQRRQKSDSIEVPDLAVFESHLKSSGEREISTTMAFVRILSTLLKQKPIKDRIVPIVPDECRTFGMEGMFRQLGIYSPHGQKYTPVDADQLMYYKEDVKGQILEEGITEAGGFCSWLAAATSYSTNNYPMLPFYIFYSMFGMQRVGDLAWAAGDMRARGFLLGGTAGRTTLAGEGLQHQDGQSLVQADIIPNCITYDPTFGFELAVIIQDGLRRMVQEQEDCFYYITVMNENYTHPDMPKGAEDGIIKG 789
            KYMLEKR+ALGGFLP RR KS+S+  PDLA FE   KS+GEREISTTMAFVR L+  L+ K I  RIVPIV DE RTFGMEGMFRQ+GIY+P GQKY PVDADQLMYY+ED  GQ+L+EGITEAG   SWLAAATSYSTNN PMLP +IFYSMFGMQR+GDL W AGDMRARGFL+GGTAGRTTL GEGLQH+DG S + A  IPNC +YDPTF +E+AVI+QDG+RRM+ EQEDCFYY+TVMNENY HP+MP GAE+GI+KG
Sbjct:  452 KYMLEKRKALGGFLPHRRTKSESLPTPDLAFFEQVTKSTGEREISTTMAFVRALNLTLRDKIIAPRIVPIVADEARTFGMEGMFRQIGIYAPFGQKYKPVDADQLMYYREDQTGQVLQEGITEAGAMGSWLAAATSYSTNNLPMLPVFIFYSMFGMQRIGDLCWLAGDMRARGFLIGGTAGRTTLNGEGLQHEDGHSHLLAGAIPNCRSYDPTFAYEVAVIMQDGMRRMLTEQEDCFYYVTVMNENYAHPEMPAGAEEGIVKG 714          
BLAST of mRNA_M-pyrifera_M_contig90496.20982.1 vs. uniprot
Match: A0A433JKM4_9GAMM (Pyruvate dehydrogenase E1 component n=1 Tax=Legionella septentrionalis TaxID=2498109 RepID=A0A433JKM4_9GAMM)

HSP 1 Score: 410 bits (1055), Expect = 7.760e-135
Identity = 192/262 (73.28%), Postives = 226/262 (86.26%), Query Frame = 1
Query:    4 YMLEKREALGGFLPQRRQKSDSIEVPDLAVFESHLKSSGEREISTTMAFVRILSTLLKQKPIKDRIVPIVPDECRTFGMEGMFRQLGIYSPHGQKYTPVDADQLMYYKEDVKGQILEEGITEAGGFCSWLAAATSYSTNNYPMLPFYIFYSMFGMQRVGDLAWAAGDMRARGFLLGGTAGRTTLAGEGLQHQDGQSLVQADIIPNCITYDPTFGFELAVIIQDGLRRMVQEQEDCFYYITVMNENYTHPDMPKGAEDGIIKG 789
            ++ ++REALGG+LP R  + +S+++PDL+ F    KSSGEREISTTMAFVR+L+ LLK K I  RIVPI+PDECRTFGMEG+FRQ+GIYSP GQ YTPVD +Q+MYY+E   GQILEEGI EAG FCSW+AAATSYSTN  PM+PFYI+YSMFG QR+GDLAWAAGDMRARGFLLGGTAGRTTLAGEGLQHQDG SL+ A  IPNC+ YDPT+ +E+AVIIQDGLRRM ++QE+ FYYIT+MNENY HPDMP+G E+GIIKG
Sbjct:  450 FLRKQREALGGYLPARNTECESLQIPDLSAFSVITKSSGEREISTTMAFVRLLTALLKDKEIGQRIVPIIPDECRTFGMEGLFRQIGIYSPVGQLYTPVDREQVMYYREARDGQILEEGINEAGAFCSWIAAATSYSTNKLPMIPFYIYYSMFGFQRIGDLAWAAGDMRARGFLLGGTAGRTTLAGEGLQHQDGHSLLLASTIPNCVAYDPTYAYEVAVIIQDGLRRMYEKQENVFYYITLMNENYHHPDMPEGVEEGIIKG 711          
BLAST of mRNA_M-pyrifera_M_contig90496.20982.1 vs. uniprot
Match: A0A378I214_9GAMM (Pyruvate dehydrogenase E1 component n=2 Tax=Legionella TaxID=445 RepID=A0A378I214_9GAMM)

HSP 1 Score: 410 bits (1054), Expect = 1.180e-134
Identity = 194/262 (74.05%), Postives = 226/262 (86.26%), Query Frame = 1
Query:    4 YMLEKREALGGFLPQRRQKSDSIEVPDLAVFESHLKSSGEREISTTMAFVRILSTLLKQKPIKDRIVPIVPDECRTFGMEGMFRQLGIYSPHGQKYTPVDADQLMYYKEDVKGQILEEGITEAGGFCSWLAAATSYSTNNYPMLPFYIFYSMFGMQRVGDLAWAAGDMRARGFLLGGTAGRTTLAGEGLQHQDGQSLVQADIIPNCITYDPTFGFELAVIIQDGLRRMVQEQEDCFYYITVMNENYTHPDMPKGAEDGIIKG 789
            ++ ++REALGG+LP R    + +++P+LA F+S LKSSG+REISTTMAFVRIL+ LLK K I  R+VPIVPDECRTFGMEG+FRQ+GIYSP GQ YTPVD +Q+MYY+E   GQILEEGI EAG FCSW+AAATSYS+N  PM+PFYI+YSMFG QR+GDLAWAAGDM+ARGFLLGGTAGRTTLAGEGLQHQDG S + A  IPNC+TYDPT+ +ELAVIIQDGLRRM  EQE+ FYYITVMNENYT PDMPKG E+GI+KG
Sbjct:  450 FLRKQREALGGYLPSRTTDFEPLKIPELATFDSLLKSSGDREISTTMAFVRILTLLLKDKEIGKRVVPIVPDECRTFGMEGLFRQIGIYSPVGQLYTPVDHEQVMYYREARDGQILEEGINEAGAFCSWIAAATSYSSNKLPMIPFYIYYSMFGFQRIGDLAWAAGDMQARGFLLGGTAGRTTLAGEGLQHQDGHSHILASTIPNCVTYDPTYAYELAVIIQDGLRRMYAEQENIFYYITVMNENYTQPDMPKGVEEGILKG 711          
BLAST of mRNA_M-pyrifera_M_contig90496.20982.1 vs. uniprot
Match: A0A349X2S6_9GAMM (Pyruvate dehydrogenase (Acetyl-transferring), homodimeric type (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A349X2S6_9GAMM)

HSP 1 Score: 399 bits (1026), Expect = 2.090e-134
Identity = 186/263 (70.72%), Postives = 225/263 (85.55%), Query Frame = 1
Query:    1 KYMLEKREALGGFLPQRRQKSDSIEVPDLAVFESHLKSSGEREISTTMAFVRILSTLLKQKPIKDRIVPIVPDECRTFGMEGMFRQLGIYSPHGQKYTPVDADQLMYYKEDVKGQILEEGITEAGGFCSWLAAATSYSTNNYPMLPFYIFYSMFGMQRVGDLAWAAGDMRARGFLLGGTAGRTTLAGEGLQHQDGQSLVQADIIPNCITYDPTFGFELAVIIQDGLRRMVQEQEDCFYYITVMNENYTHPDMPKGAEDGIIKG 789
            +Y+  +R+ LGG+LP R + S  +++P L  F   L+S+G+REISTTMAFVRILSTL+++K IKDRIVPIVPDE RTFGMEG+FRQLGI++  GQKY P D+D LMYY+ED+KGQ+L+EGI EAG   SW+AA+TSYSTN   M+PFYI+YSMFG QR+GDLAWAAGDM+ARGFL+GGTAGRTTLAGEGLQHQDG S + A +IPNC++YDPTF +ELAVIIQDGLRRM QE+E+ FYYITVMNENY HP+MPKGAE GI+KG
Sbjct:  120 RYLHSRRQHLGGYLPARSRGSSKLDIPGLDKFSKLLESTGDREISTTMAFVRILSTLIREKSIKDRIVPIVPDEARTFGMEGLFRQLGIFAREGQKYQPEDSDSLMYYREDIKGQVLQEGINEAGAMSSWIAASTSYSTNELAMIPFYIYYSMFGFQRIGDLAWAAGDMQARGFLVGGTAGRTTLAGEGLQHQDGHSHLHASMIPNCVSYDPTFAYELAVIIQDGLRRMYQEEENIFYYITVMNENYAHPEMPKGAEKGILKG 382          
BLAST of mRNA_M-pyrifera_M_contig90496.20982.1 vs. uniprot
Match: UPI0010543954 (pyruvate dehydrogenase (acetyl-transferring), homodimeric type n=2 Tax=Legionella TaxID=445 RepID=UPI0010543954)

HSP 1 Score: 409 bits (1051), Expect = 2.990e-134
Identity = 194/262 (74.05%), Postives = 225/262 (85.88%), Query Frame = 1
Query:    4 YMLEKREALGGFLPQRRQKSDSIEVPDLAVFESHLKSSGEREISTTMAFVRILSTLLKQKPIKDRIVPIVPDECRTFGMEGMFRQLGIYSPHGQKYTPVDADQLMYYKEDVKGQILEEGITEAGGFCSWLAAATSYSTNNYPMLPFYIFYSMFGMQRVGDLAWAAGDMRARGFLLGGTAGRTTLAGEGLQHQDGQSLVQADIIPNCITYDPTFGFELAVIIQDGLRRMVQEQEDCFYYITVMNENYTHPDMPKGAEDGIIKG 789
            ++ ++REALGGFLP R  + +S+ VP+L  F +  K+SG+REISTTMAFVRILS LLK K +  RIVPIVPDECRTFGMEG+FRQ+GIYSP GQ YTPVD +Q+M+YKE   GQILEEGI EAG FCSW+AAATSYSTN+ PM+PFYI+YSMFG QRVGDLAWAAGDM+ARGFLLGGTAGRTTLAGEGLQHQDG S + A  IPNC++YDPT+ +ELAVIIQDGLRRM + QE+ FYYITVMNENY HPDMP+G E+GIIKG
Sbjct:  449 FLRKQREALGGFLPHRSHECESLSVPELEAFSTVTKNSGDREISTTMAFVRILSVLLKDKELGKRIVPIVPDECRTFGMEGLFRQVGIYSPVGQLYTPVDHEQVMFYKEAKDGQILEEGINEAGAFCSWIAAATSYSTNSLPMIPFYIYYSMFGFQRVGDLAWAAGDMKARGFLLGGTAGRTTLAGEGLQHQDGHSQIYASTIPNCVSYDPTYAYELAVIIQDGLRRMYKNQENVFYYITVMNENYHHPDMPEGVEEGIIKG 710          
BLAST of mRNA_M-pyrifera_M_contig90496.20982.1 vs. uniprot
Match: A0A3N5JPU2_9GAMM (Pyruvate dehydrogenase E1 component n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A3N5JPU2_9GAMM)

HSP 1 Score: 409 bits (1051), Expect = 3.300e-134
Identity = 197/263 (74.90%), Postives = 229/263 (87.07%), Query Frame = 1
Query:    1 KYMLEKREALGGFLPQRRQKSDSIEVPDLAVFESHLKSSGEREISTTMAFVRILSTLLKQKPIKDRIVPIVPDECRTFGMEGMFRQLGIYSPHGQKYTPVDADQLMYYKEDVKGQILEEGITEAGGFCSWLAAATSYSTNNYPMLPFYIFYSMFGMQRVGDLAWAAGDMRARGFLLGGTAGRTTLAGEGLQHQDGQSLVQADIIPNCITYDPTFGFELAVIIQDGLRRMVQEQEDCFYYITVMNENYTHPDMPKGAEDGIIKG 789
            +Y+LE+R++LGGFLPQRR++   +EVPDLA FES LKSSGEREISTTMAFVR L+ LL+ K I +RIVPIV DE RTFGMEGMFRQLGIYS  GQ YTPVD+DQLM+YKED KGQIL+EGITEAG F SW+AAATSYST+   M+PF+IFYSMFG QRVGDLAWAAGDMRARGFL+GGTAGRTTL GEGLQH+DG S + + ++PNC++YDPTF +ELAVI+QDGLRRM QE +D +YYITV NENY HPDMP+GAE+GI KG
Sbjct:  452 RYLLERRKSLGGFLPQRRREVAPLEVPDLAAFESLLKSSGEREISTTMAFVRCLTALLRDKRIAERIVPIVADEARTFGMEGMFRQLGIYSSVGQLYTPVDSDQLMFYKEDQKGQILQEGITEAGAFSSWIAAATSYSTSGVAMIPFFIFYSMFGFQRVGDLAWAAGDMRARGFLIGGTAGRTTLNGEGLQHEDGNSHMMSAMVPNCVSYDPTFAYELAVILQDGLRRMYQEGQDVYYYITVANENYPHPDMPEGAEEGIRKG 714          
BLAST of mRNA_M-pyrifera_M_contig90496.20982.1 vs. uniprot
Match: A0A3C7W475_9GAMM (Pyruvate dehydrogenase E1 component n=2 Tax=Halieaceae TaxID=1706372 RepID=A0A3C7W475_9GAMM)

HSP 1 Score: 407 bits (1047), Expect = 1.100e-133
Identity = 193/263 (73.38%), Postives = 227/263 (86.31%), Query Frame = 1
Query:    1 KYMLEKREALGGFLPQRRQKSDSIEVPDLAVFESHLKSSGEREISTTMAFVRILSTLLKQKPIKDRIVPIVPDECRTFGMEGMFRQLGIYSPHGQKYTPVDADQLMYYKEDVKGQILEEGITEAGGFCSWLAAATSYSTNNYPMLPFYIFYSMFGMQRVGDLAWAAGDMRARGFLLGGTAGRTTLAGEGLQHQDGQSLVQADIIPNCITYDPTFGFELAVIIQDGLRRMVQEQEDCFYYITVMNENYTHPDMPKGAEDGIIKG 789
            +YMLE+REALGGF+P RR+   +++VPDL  F+S LK SGER ISTTMAFVRILS+L K K + +R+VPIVPDE RTFGMEGMFRQLGIYS  GQ+YTP DA Q+M+YKED+KGQILEEGI EAG F SWLAAATSYST++YPM+PFY+FYSMFG QR+GDLAWAAGD +ARGFL+G T+GRTTL GEGLQHQDG S +QA  IPNC++YDPT+ +ELAVIIQDGLRRM  E+E+ FYYIT MNENY HP+MP GAE+GII+G
Sbjct:  445 RYMLERREALGGFVPARRRGERALDVPDLDAFKSQLKGSGERSISTTMAFVRILSSLAKDKALGERVVPIVPDEARTFGMEGMFRQLGIYSSVGQRYTPHDAGQIMFYKEDIKGQILEEGINEAGAFSSWLAAATSYSTSDYPMVPFYVFYSMFGFQRIGDLAWAAGDSQARGFLIGATSGRTTLNGEGLQHQDGHSHLQAQTIPNCVSYDPTYSYELAVIIQDGLRRMYLERENRFYYITTMNENYPHPEMPAGAEEGIIRG 707          
BLAST of mRNA_M-pyrifera_M_contig90496.20982.1 vs. uniprot
Match: A0A7Z9XS92_9GAMM (Pyruvate dehydrogenase (Acetyl-transferring), homodimeric type n=1 Tax=Chromatiaceae bacterium TaxID=2049432 RepID=A0A7Z9XS92_9GAMM)

HSP 1 Score: 392 bits (1008), Expect = 2.210e-133
Identity = 184/259 (71.04%), Postives = 221/259 (85.33%), Query Frame = 1
Query:   13 EKREALGGFLPQRRQKSDSIEVPDLAVFESHLKSSGEREISTTMAFVRILSTLLKQKPIKDRIVPIVPDECRTFGMEGMFRQLGIYSPHGQKYTPVDADQLMYYKEDVKGQILEEGITEAGGFCSWLAAATSYSTNNYPMLPFYIFYSMFGMQRVGDLAWAAGDMRARGFLLGGTAGRTTLAGEGLQHQDGQSLVQADIIPNCITYDPTFGFELAVIIQDGLRRMVQEQEDCFYYITVMNENYTHPDMPKGAEDGIIKG 789
            E+R+ALGG+LP RR KS ++E+P L  F++ L+ SGERE+STTMA+VR L++LL+ K +   +VPIVPDE RTFGMEGMFRQLGIYS  GQ YTP+DADQ+MYY+EDVKGQIL+EGI EAG   SW+AAATSYS +  PM+PFY++YSMFG QRVGDLAWAAGDM+ARGFL+GGTAGRTTL+GEGLQHQDG S + +  IPNC +YDPTF +EL VI+QDG+RRM QEQE+ FYYIT+MNENY HP MPKGAE+GIIKG
Sbjct:    3 ERRQALGGYLPSRRAKSTALEIPGLDAFQTLLEGSGEREMSTTMAYVRFLTSLLRDKKVGKHVVPIVPDEARTFGMEGMFRQLGIYSHVGQLYTPMDADQVMYYREDVKGQILQEGINEAGAMSSWIAAATSYSNHGVPMIPFYVYYSMFGFQRVGDLAWAAGDMQARGFLMGGTAGRTTLSGEGLQHQDGHSHLASAGIPNCRSYDPTFAYELTVILQDGMRRMYQEQENIFYYITIMNENYVHPPMPKGAEEGIIKG 261          
BLAST of mRNA_M-pyrifera_M_contig90496.20982.1 vs. uniprot
Match: A0A2N2S5Q0_9PROT (Pyruvate dehydrogenase (Acetyl-transferring), homodimeric type (Fragment) n=1 Tax=Betaproteobacteria bacterium HGW-Betaproteobacteria-20 TaxID=2013712 RepID=A0A2N2S5Q0_9PROT)

HSP 1 Score: 392 bits (1006), Expect = 5.580e-133
Identity = 187/263 (71.10%), Postives = 219/263 (83.27%), Query Frame = 1
Query:    1 KYMLEKREALGGFLPQRRQKSDSIEVPDLAVFESHLKSSGEREISTTMAFVRILSTLLKQKPIKDRIVPIVPDECRTFGMEGMFRQLGIYSPHGQKYTPVDADQLMYYKEDVKGQILEEGITEAGGFCSWLAAATSYSTNNYPMLPFYIFYSMFGMQRVGDLAWAAGDMRARGFLLGGTAGRTTLAGEGLQHQDGQSLVQADIIPNCITYDPTFGFELAVIIQDGLRRMVQEQEDCFYYITVMNENYTHPDMPKGAEDGIIKG 789
            +YM E+R A+GG +P RR+K + + +P L+ FE+ L S+GEREISTTMAFVRILSTL++ K I   +VPIVPDE RTFGMEGMFRQLGIY+  GQ Y P+D+DQ+MYYKE   GQILEEGI EAG F SW+AAATSYS     M+PFYIFYSMFG QR+GDLAWAAGD RARGFLLG TAGRTTL GEGLQH+DG S + +  IPNCI+YDPTF +ELAVIIQ+GLRRMVQ QED +YYIT+MNENYTHP+MPKGAE+GI+KG
Sbjct:    7 RYMAERRAAMGGSVPARRRKGNELTIPPLSAFENMLVSTGEREISTTMAFVRILSTLVRDKQIGKYVVPIVPDEARTFGMEGMFRQLGIYASQGQLYEPMDSDQVMYYKESKDGQILEEGINEAGSFSSWMAAATSYSVTGVQMIPFYIFYSMFGFQRIGDLAWAAGDSRARGFLLGATAGRTTLNGEGLQHEDGHSHLMSATIPNCISYDPTFAYELAVIIQEGLRRMVQNQEDVYYYITLMNENYTHPEMPKGAEEGILKG 269          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90496.20982.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E3MJA6_9GAMM1.480e-13774.43Pyruvate dehydrogenase E1 component n=1 Tax=Legion... [more]
A0A411HFF3_9GAMM7.540e-13675.29Pyruvate dehydrogenase E1 component n=1 Tax=Pseudo... [more]
A0A433JKM4_9GAMM7.760e-13573.28Pyruvate dehydrogenase E1 component n=1 Tax=Legion... [more]
A0A378I214_9GAMM1.180e-13474.05Pyruvate dehydrogenase E1 component n=2 Tax=Legion... [more]
A0A349X2S6_9GAMM2.090e-13470.72Pyruvate dehydrogenase (Acetyl-transferring), homo... [more]
UPI00105439542.990e-13474.05pyruvate dehydrogenase (acetyl-transferring), homo... [more]
A0A3N5JPU2_9GAMM3.300e-13474.90Pyruvate dehydrogenase E1 component n=1 Tax=Xantho... [more]
A0A3C7W475_9GAMM1.100e-13373.38Pyruvate dehydrogenase E1 component n=2 Tax=Haliea... [more]
A0A7Z9XS92_9GAMM2.210e-13371.04Pyruvate dehydrogenase (Acetyl-transferring), homo... [more]
A0A2N2S5Q0_9PROT5.580e-13371.10Pyruvate dehydrogenase (Acetyl-transferring), homo... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90496contigM-pyrifera_M_contig90496:1..789 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score403.3
Seed ortholog evalue8.7e-110
Seed eggNOG ortholog1265313.HRUBRA_00635
Preferred nameaceE
KEGG rclassRC00004,RC00027,RC00627,RC02742,RC02744,RC02882
KEGG koko:K00163
KEGG ReactionR00014,R00209,R01699,R03270
KEGG Pathwayko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00307
Hectar predicted targeting categoryother localisation
GOsGO:0000287,GO:0003674,GO:0003824,GO:0004738,GO:0005488,GO:0005515,GO:0008150,GO:0008152,GO:0016491,GO:0016903,GO:0019842,GO:0030976,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0046872,GO:0046983,GO:0048037,GO:0050662,GO:0055114,GO:0097159,GO:1901363,GO:1901681
EggNOG free text desc.Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
EggNOG OGs1J56P@118884,1MV21@1224,1RN6K@1236,COG2609@1,COG2609@2
EC1.2.4.1
COG Functional cat.C
BiGG Reactione_coli_core.b0114,iAF1260.b0114,iBWG_1329.BWG_0107,iE2348C_1286.E2348C_0117,iEC55989_1330.EC55989_0107,iECDH10B_1368.ECDH10B_0094,iECDH1ME8569_1439.ECDH1ME8569_0108,iECH74115_1262.ECH74115_0121,iECIAI1_1343.ECIAI1_0112,iECNA114_1301.ECNA114_0106,iECO103_1326.ECO103_0114,iECO111_1330.ECO111_0115,iECO26_1355.ECO26_0116,iECSE_1348.ECSE_0114,iECSF_1327.ECSF_0127,iECSP_1301.ECSP_0115,iECUMN_1333.ECUMN_0111,iECW_1372.ECW_m0111,iECs_1301.ECs0118,iEKO11_1354.EKO11_3802,iETEC_1333.ETEC_0110,iEcDH1_1363.EcDH1_3488,iEcE24377_1341.EcE24377A_0116,iEcHS_1320.EcHS_A0118,iEcSMS35_1347.EcSMS35_0124,iEcolC_1368.EcolC_3545,iG2583_1286.G2583_0118,iJN746.PP_0339,iJO1366.b0114,iJR904.b0114,iUMNK88_1353.UMNK88_112,iWFL_1372.ECW_m0111,iY75_1357.Y75_RS00580,iZ_1308.Z0124
Best tax levelunclassified Gammaproteobacteria
Best eggNOG OGNA|NA|NA
BRITEbr01601,ko00000,ko00001,ko00002,ko01000
Exons1
Model size789
Cds size783
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816816.9197924-CDS-M-pyrifera_M_contig90496:0..7831622816816.9197924-CDS-M-pyrifera_M_contig90496:0..783Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90496 1..783 -
1692278195.597385-CDS-M-pyrifera_M_contig90496:0..7831692278195.597385-CDS-M-pyrifera_M_contig90496:0..783Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90496 1..783 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816816.9348238-UTR-M-pyrifera_M_contig90496:783..7891622816816.9348238-UTR-M-pyrifera_M_contig90496:783..789Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig90496 784..789 -
1692278195.609365-UTR-M-pyrifera_M_contig90496:783..7891692278195.609365-UTR-M-pyrifera_M_contig90496:783..789Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig90496 784..789 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90496.20982.1prot_M-pyrifera_M_contig90496.20982.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90496 1..783 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90496.20982.1

>prot_M-pyrifera_M_contig90496.20982.1 ID=prot_M-pyrifera_M_contig90496.20982.1|Name=mRNA_M-pyrifera_M_contig90496.20982.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=261bp
MLEKREALGGFLPQRRQKSDSIEVPDLAVFESHLKSSGEREISTTMAFVR
ILSTLLKQKPIKDRIVPIVPDECRTFGMEGMFRQLGIYSPHGQKYTPVDA
DQLMYYKEDVKGQILEEGITEAGGFCSWLAAATSYSTNNYPMLPFYIFYS
MFGMQRVGDLAWAAGDMRARGFLLGGTAGRTTLAGEGLQHQDGQSLVQAD
IIPNCITYDPTFGFELAVIIQDGLRRMVQEQEDCFYYITVMNENYTHPDM
PKGAEDGIIKG
back to top

mRNA from alignment at M-pyrifera_M_contig90496:1..789-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90496.20982.1 ID=mRNA_M-pyrifera_M_contig90496.20982.1|Name=mRNA_M-pyrifera_M_contig90496.20982.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=789bp|location=Sequence derived from alignment at M-pyrifera_M_contig90496:1..789- (Macrocystis pyrifera P11B4 male)
AAGTACATGCTAGAGAAGCGCGAAGCCCTAGGTGGCTTCTTGCCGCAGCG CCGGCAAAAGTCGGATTCTATCGAAGTGCCTGATTTGGCTGTCTTTGAAT CACACTTGAAAAGTTCGGGCGAGCGTGAAATTTCCACAACAATGGCTTTC GTGCGAATCTTAAGTACGTTGTTGAAACAAAAACCGATTAAAGATCGTAT TGTGCCAATTGTTCCCGATGAGTGTCGCACCTTTGGTATGGAAGGCATGT TTCGTCAACTGGGTATTTATTCACCGCACGGGCAAAAATACACCCCAGTT GATGCGGATCAGTTGATGTATTACAAAGAAGATGTCAAAGGCCAAATTTT AGAAGAGGGGATCACCGAAGCCGGTGGTTTTTGTTCTTGGTTAGCAGCAG CAACATCTTACAGCACGAATAATTATCCGATGTTACCGTTTTATATTTTC TATTCGATGTTTGGTATGCAGCGCGTAGGTGATTTAGCCTGGGCTGCTGG CGACATGCGCGCGCGTGGCTTTTTGCTGGGTGGGACCGCTGGTCGCACAA CACTTGCAGGCGAAGGCTTACAGCACCAAGATGGACAGAGTCTTGTACAA GCGGATATTATTCCAAACTGTATTACTTACGATCCAACCTTTGGCTTTGA GTTAGCAGTTATCATCCAAGACGGATTGCGCCGCATGGTGCAAGAGCAAG AAGATTGCTTTTATTACATCACCGTCATGAATGAAAACTACACGCATCCA GACATGCCAAAAGGTGCCGAAGACGGCATTATCAAAGGA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig90496:1..789-

>mRNA_M-pyrifera_M_contig90496.20982.1 ID=mRNA_M-pyrifera_M_contig90496.20982.1|Name=mRNA_M-pyrifera_M_contig90496.20982.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1566bp|location=Sequence derived from alignment at M-pyrifera_M_contig90496:1..789- (Macrocystis pyrifera P11B4 male)
ATGCTAGAGAAGCGCGAAGCCCTAGGTGGCTTCTTGCCGCAGCGCCGGCA
AAAGTCGGATTCTATCGAAGTGCCTGATTTGGCTGTCTTTGAATCACACT
TGAAAAGTTCGGGCGAGCGTGAAATTTCCACAACAATGGCTTTCGTGCGA
ATCTTAAGTACGTTGTTGAAACAAAAACCGATTAAAGATCGTATTGTGCC
AATTGTTCCCGATGAGTGTCGCACCTTTGGTATGGAAGGCATGTTTCGTC
AACTGGGTATTTATTCACCGCACGGGCAAAAATACACCCCAGTTGATGCG
GATCAGTTGATGTATTACAAAGAAGATGTCAAAGGCCAAATTTTAGAAGA
GGGGATCACCGAAGCCGGTGGTTTTTGTTCTTGGTTAGCAGCAGCAACAT
CTTACAGCACGAATAATTATCCGATGTTACCGTTTTATATTTTCTATTCG
ATGTTTGGTATGCAGCGCGTAGGTGATTTAGCCTGGGCTGCTGGCGACAT
GCGCGCGCGTGGCTTTTTGCTGGGTGGGACCGCTGGTCGCACAACACTTG
CAGGCGAAGGCTTACAGCACCAAGATGGACAGAGTCTTGTACAAGCGGAT
ATTATTCCAAACTGTATTACTTACGATCCAACCTTTGGCTTTGAGTTAGC
AGTTATCATCCAAGACGGATTGCGCCGCATGGTGCAAGAGCAAGAAGATT
GCTTTTATTACATCACCGTCATGAATGAAAACTACACGCATCCAGACATG
CCAAAAGGTGCCGAAGACGGCATTATCAAAGGAATGCTAGAGAAGCGCGA
AGCCCTAGGTGGCTTCTTGCCGCAGCGCCGGCAAAAGTCGGATTCTATCG
AAGTGCCTGATTTGGCTGTCTTTGAATCACACTTGAAAAGTTCGGGCGAG
CGTGAAATTTCCACAACAATGGCTTTCGTGCGAATCTTAAGTACGTTGTT
GAAACAAAAACCGATTAAAGATCGTATTGTGCCAATTGTTCCCGATGAGT
GTCGCACCTTTGGTATGGAAGGCATGTTTCGTCAACTGGGTATTTATTCA
CCGCACGGGCAAAAATACACCCCAGTTGATGCGGATCAGTTGATGTATTA
CAAAGAAGATGTCAAAGGCCAAATTTTAGAAGAGGGGATCACCGAAGCCG
GTGGTTTTTGTTCTTGGTTAGCAGCAGCAACATCTTACAGCACGAATAAT
TATCCGATGTTACCGTTTTATATTTTCTATTCGATGTTTGGTATGCAGCG
CGTAGGTGATTTAGCCTGGGCTGCTGGCGACATGCGCGCGCGTGGCTTTT
TGCTGGGTGGGACCGCTGGTCGCACAACACTTGCAGGCGAAGGCTTACAG
CACCAAGATGGACAGAGTCTTGTACAAGCGGATATTATTCCAAACTGTAT
TACTTACGATCCAACCTTTGGCTTTGAGTTAGCAGTTATCATCCAAGACG
GATTGCGCCGCATGGTGCAAGAGCAAGAAGATTGCTTTTATTACATCACC
GTCATGAATGAAAACTACACGCATCCAGACATGCCAAAAGGTGCCGAAGA
CGGCATTATCAAAGGA
back to top