mRNA_M-pyrifera_M_contig90355.20947.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90355.20947.1
Unique NamemRNA_M-pyrifera_M_contig90355.20947.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig90355.20947.1 vs. uniprot
Match: A0A3B9A938_9GAMM (Uncharacterized protein n=1 Tax=Porticoccaceae bacterium TaxID=2026782 RepID=A0A3B9A938_9GAMM)

HSP 1 Score: 448 bits (1152), Expect = 3.250e-155
Identity = 208/263 (79.09%), Postives = 230/263 (87.45%), Query Frame = 1
Query:    1 GGFTFAEIEADDPMAGQKVIWNMLWRPGENDYVMPMVTWMRSENGVLDRKLEYTSVNSTYALGDDQCLVPGYEEVKNKRVMEFRSPRDMAGAKDLSIEYVDHYKENSGWMYVPAQRKPRRTLASERTSELMGMDMIREDINGFGGKVHENNWTYLGKRKVVATINVADNPEFGGPHLWVPNNARWEVRDTHVVLIEPKSSNHPYSARIVFIDAETWWTHWMFAFDRQDDQLLRMNQHFLKYSESYAHETPQQAPYIEQDFAKN 789
            GG+ F EI  DDP AGQKVI NMLWRPG NDY MPMVTW+RSE G LDR +EYTSVN TYA G    LVPGYEEVK+K+VMEFRSPRDMAGAKD+SI YVDHYKENSGW+Y+PA+RKPR+TLASERT ELMGMDMIRED NGFGGKV ENNW YLGKRKV+ATINV  NPEFGGPHLWVP+  RWEVRD HVVL++PKS NHPYSARIVF+DAET+WTHWMFAFDR+DDQ+LRMNQHFLKYSE Y  E P+QAPY++QDF K+
Sbjct:  126 GGYPFPEIAPDDPQAGQKVIQNMLWRPGANDYDMPMVTWLRSEGGKLDRIMEYTSVNVTYAHGH-HSLVPGYEEVKSKQVMEFRSPRDMAGAKDMSIRYVDHYKENSGWLYMPAERKPRKTLASERTGELMGMDMIREDSNGFGGKVFENNWEYLGKRKVLATINVKTNPEFGGPHLWVPHKTRWEVRDAHVVLVKPKSENHPYSARIVFVDAETYWTHWMFAFDRKDDQMLRMNQHFLKYSEDYDVEPPEQAPYVKQDFNKS 387          
BLAST of mRNA_M-pyrifera_M_contig90355.20947.1 vs. uniprot
Match: A0A352Q471_9GAMM (Uncharacterized protein (Fragment) n=1 Tax=Porticoccaceae bacterium TaxID=2026782 RepID=A0A352Q471_9GAMM)

HSP 1 Score: 442 bits (1138), Expect = 1.740e-154
Identity = 207/263 (78.71%), Postives = 228/263 (86.69%), Query Frame = 1
Query:    1 GGFTFAEIEADDPMAGQKVIWNMLWRPGENDYVMPMVTWMRSENGVLDRKLEYTSVNSTYALGDDQCLVPGYEEVKNKRVMEFRSPRDMAGAKDLSIEYVDHYKENSGWMYVPAQRKPRRTLASERTSELMGMDMIREDINGFGGKVHENNWTYLGKRKVVATINVADNPEFGGPHLWVPNNARWEVRDTHVVLIEPKSSNHPYSARIVFIDAETWWTHWMFAFDRQDDQLLRMNQHFLKYSESYAHETPQQAPYIEQDFAKN 789
            GG+ F EI+ +D MAGQKVI NMLWRPG NDY MPMVTW+RSE G LDR++EY SVN+TYA G    LVPGYEEVK+K+VMEFRSPRDMAGAKD+SI YVDHY+ENSGW+Y+P QRKPRRTLASERT ELMGMDMIRED NGFGGKV ENNW YLG RKV+AT NV  NPEFGGPHLWVP+  RWEVRD HVVLI+PKS NHPYSARIVF+DAET+WTHWMFAFDR DDQ+LRMNQHFLKYSE YA E P QAPYI+QDF K+
Sbjct:   33 GGYPFPEIDPNDAMAGQKVIQNMLWRPGANDYDMPMVTWLRSEGGKLDREMEYFSVNATYAKGH-HSLVPGYEEVKSKQVMEFRSPRDMAGAKDMSIRYVDHYRENSGWLYMPEQRKPRRTLASERTGELMGMDMIREDSNGFGGKVFENNWAYLGTRKVLATNNVLTNPEFGGPHLWVPHKTRWEVRDAHVVLIKPKSENHPYSARIVFVDAETYWTHWMFAFDRTDDQMLRMNQHFLKYSEDYATEPPAQAPYIKQDFNKS 294          
BLAST of mRNA_M-pyrifera_M_contig90355.20947.1 vs. uniprot
Match: A0A2A5C013_9GAMM (Uncharacterized protein n=1 Tax=Cellvibrionales bacterium TaxID=2026722 RepID=A0A2A5C013_9GAMM)

HSP 1 Score: 442 bits (1137), Expect = 7.080e-153
Identity = 202/263 (76.81%), Postives = 233/263 (88.59%), Query Frame = 1
Query:    1 GGFTFAEIEADDPMAGQKVIWNMLWRPGENDYVMPMVTWMRSENGVLDRKLEYTSVNSTYALGDDQCLVPGYEEVKNKRVMEFRSPRDMAGAKDLSIEYVDHYKENSGWMYVPAQRKPRRTLASERTSELMGMDMIREDINGFGGKVHENNWTYLGKRKVVATINVADNPEFGGPHLWVPNNARWEVRDTHVVLIEPKSSNHPYSARIVFIDAETWWTHWMFAFDRQDDQLLRMNQHFLKYSESYAHETPQQAPYIEQDFAKN 789
            GGF F+EI+ADDP+AGQKVIWNMLWRPG ND+ MPMVTW+R E+G LDR +EYT+ ++TYA GD   LVPGYEEVK+KRVMEFRSPRDMAGAKD+SI YVDH +ENSGW+Y+PAQRKPRRTLASERT ELMGMDMIRED NGFGGKV+EN W YLGKRK++ATINV  NPEFGG  LWVP+  RWEVRDTHVVLI+PKS +HPYSAR+VF+DAET+WTHWMFAFD++DDQL RMNQHFLKYSE Y  E P QAP+I+QD++K+
Sbjct:  130 GGFPFSEIKADDPVAGQKVIWNMLWRPGTNDFDMPMVTWLRGESGKLDRIMEYTNTSATYARGD-HSLVPGYEEVKSKRVMEFRSPRDMAGAKDMSITYVDHRRENSGWLYMPAQRKPRRTLASERTGELMGMDMIREDNNGFGGKVYENTWEYLGKRKILATINVESNPEFGGDSLWVPHKTRWEVRDTHVVLIKPKSEDHPYSARVVFVDAETYWTHWMFAFDKKDDQLFRMNQHFLKYSEDYDKEPPAQAPFIKQDYSKS 391          
BLAST of mRNA_M-pyrifera_M_contig90355.20947.1 vs. uniprot
Match: A0A2E0LFZ6_9GAMM (Uncharacterized protein n=1 Tax=Porticoccaceae bacterium TaxID=2026782 RepID=A0A2E0LFZ6_9GAMM)

HSP 1 Score: 439 bits (1130), Expect = 7.910e-152
Identity = 199/263 (75.67%), Postives = 232/263 (88.21%), Query Frame = 1
Query:    1 GGFTFAEIEADDPMAGQKVIWNMLWRPGENDYVMPMVTWMRSENGVLDRKLEYTSVNSTYALGDDQCLVPGYEEVKNKRVMEFRSPRDMAGAKDLSIEYVDHYKENSGWMYVPAQRKPRRTLASERTSELMGMDMIREDINGFGGKVHENNWTYLGKRKVVATINVADNPEFGGPHLWVPNNARWEVRDTHVVLIEPKSSNHPYSARIVFIDAETWWTHWMFAFDRQDDQLLRMNQHFLKYSESYAHETPQQAPYIEQDFAKN 789
            GGF F EI+  DPMAGQKVIWNMLWRPG N+Y MPMVTW+RSE G LDR++EYTSVN+ YA G+  CLVPGYEEV+ K++MEFRSPRDMAGAK+++I YVDH+ E+SGW+Y+PAQRKPR+TL+SERT ELMGMDMIRED +GF GKV+EN+W YLG+RKV+ATINV DNPEFGGPHLWVP+  RWEVRD+HVVLI+PK  +HPYS RIVFIDAET+WTHWMF FDR+DD+LLRM QHFLKYSESYA E PQQAP++EQDF  N
Sbjct:  129 GGFPFPEIDPKDPMAGQKVIWNMLWRPGANNYDMPMVTWLRSEGGKLDRQMEYTSVNAQYARGE-HCLVPGYEEVRAKKIMEFRSPRDMAGAKNMTISYVDHHAEDSGWLYMPAQRKPRKTLSSERTGELMGMDMIREDSDGFAGKVYENDWEYLGRRKVLATINVPDNPEFGGPHLWVPHKTRWEVRDSHVVLIKPKVDDHPYSYRIVFIDAETYWTHWMFGFDRKDDELLRMAQHFLKYSESYAEEQPQQAPFVEQDFTDN 390          
BLAST of mRNA_M-pyrifera_M_contig90355.20947.1 vs. uniprot
Match: A0A2E8K7E6_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E8K7E6_9GAMM)

HSP 1 Score: 435 bits (1119), Expect = 3.830e-150
Identity = 198/263 (75.29%), Postives = 229/263 (87.07%), Query Frame = 1
Query:    1 GGFTFAEIEADDPMAGQKVIWNMLWRPGENDYVMPMVTWMRSENGVLDRKLEYTSVNSTYALGDDQCLVPGYEEVKNKRVMEFRSPRDMAGAKDLSIEYVDHYKENSGWMYVPAQRKPRRTLASERTSELMGMDMIREDINGFGGKVHENNWTYLGKRKVVATINVADNPEFGGPHLWVPNNARWEVRDTHVVLIEPKSSNHPYSARIVFIDAETWWTHWMFAFDRQDDQLLRMNQHFLKYSESYAHETPQQAPYIEQDFAKN 789
            G F F EI+ DDP A QK  WNMLWRPG ++Y MPMVTW+RSENG LDR++E+  V++TYA GD   LVPGYEEVK+K +MEFRSPRDMAG K ++I YVDHYKENSGWMY+PAQRKPRRTL+SERT E MGMDMI+ED  GF GKV+ENNWTYLGKR V+AT+NV DNPEFGGPHLWVP+ ARWEVR++HVVLIEPK+ NHPYS RIVFIDAET+WTHWMFAFDR+DD+LLRMNQHFLKYSESYA E  QQAP+++QD++KN
Sbjct:  130 GKFPFPEIKPDDPEAAQKATWNMLWRPGTDNYDMPMVTWLRSENGQLDRQMEFVGVSATYARGD-HSLVPGYEEVKSKSIMEFRSPRDMAGTKSMTITYVDHYKENSGWMYMPAQRKPRRTLSSERTGESMGMDMIKEDALGFSGKVYENNWTYLGKRSVLATVNVRDNPEFGGPHLWVPHKARWEVRESHVVLIEPKADNHPYSYRIVFIDAETYWTHWMFAFDREDDRLLRMNQHFLKYSESYATEVAQQAPFVKQDYSKN 391          
BLAST of mRNA_M-pyrifera_M_contig90355.20947.1 vs. uniprot
Match: A0A2E8J4B8_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E8J4B8_9GAMM)

HSP 1 Score: 432 bits (1111), Expect = 7.440e-149
Identity = 199/263 (75.67%), Postives = 227/263 (86.31%), Query Frame = 1
Query:    1 GGFTFAEIEADDPMAGQKVIWNMLWRPGENDYVMPMVTWMRSENGVLDRKLEYTSVNSTYALGDDQCLVPGYEEVKNKRVMEFRSPRDMAGAKDLSIEYVDHYKENSGWMYVPAQRKPRRTLASERTSELMGMDMIREDINGFGGKVHENNWTYLGKRKVVATINVADNPEFGGPHLWVPNNARWEVRDTHVVLIEPKSSNHPYSARIVFIDAETWWTHWMFAFDRQDDQLLRMNQHFLKYSESYAHETPQQAPYIEQDFAKN 789
            G   F EI+ DDP A QKV WNMLWRPG ++Y MPMVTW+RSENG LDR++E+  V++TYA GD   LVPGYEEVK+K +MEFRSPRDMAG K ++I YVDHYKENSGW+YVPAQRKPRRT++SERT E MGMDMI ED  GF GK++ENNWTYLGKR V+ATINV DNPEFGGPHLWVP+ ARWEVR++HVVLIEPK+ NHPYS RIVFIDAET WTHWMFAFDR+DDQLLRMNQHFLKYSESYA E  QQAP+++QDF+KN
Sbjct:  135 GRIPFPEIKQDDPQAAQKVTWNMLWRPGTDNYDMPMVTWLRSENGKLDRQMEFVGVSATYARGD-HSLVPGYEEVKSKSIMEFRSPRDMAGTKSMTITYVDHYKENSGWLYVPAQRKPRRTMSSERTGETMGMDMIGEDALGFSGKLYENNWTYLGKRSVLATINVRDNPEFGGPHLWVPHKARWEVRESHVVLIEPKADNHPYSYRIVFIDAETNWTHWMFAFDREDDQLLRMNQHFLKYSESYASEMAQQAPFMKQDFSKN 396          
BLAST of mRNA_M-pyrifera_M_contig90355.20947.1 vs. uniprot
Match: A0A532DJZ1_9BACT (DUF1329 domain-containing protein n=1 Tax=Nitrospira sp. TaxID=70125 RepID=A0A532DJZ1_9BACT)

HSP 1 Score: 415 bits (1066), Expect = 4.560e-142
Identity = 189/263 (71.86%), Postives = 219/263 (83.27%), Query Frame = 1
Query:    1 GGFTFAEIEADDPMAGQKVIWNMLWRPGENDYVMPMVTWMRSENGVLDRKLEYTSVNSTYALGDDQCLVPGYEEVKNKRVMEFRSPRDMAGAKDLSIEYVDHYKENSGWMYVPAQRKPRRTLASERTSELMGMDMIREDINGFGGKVHENNWTYLGKRKVVATINVADNPEFGGPHLWVPNNARWEVRDTHVVLIEPKSSNHPYSARIVFIDAETWWTHWMFAFDRQDDQLLRMNQHFLKYSESYAHETPQQAPYIEQDFAKN 789
            GGF F EI+  DP A  KV WN+ WRPG   YVMPMV W RS++G LDR+ E+TS++S YA G+  CLVPGY+E+K K +MEFRSPRDMAGAK+LS+ YVDHY+E++GW+Y+P QRKPRRTLASERTSE+MGMD  RED  GFGGKVHE NWTYLG   V+AT+NV DNP  GGPHLWVPNNARWEVR  HV+LI+PK+ NHPYS ++VFID ET+WT WMFAFDRQDDQLLRMNQHFLKYSESYA ETPQQAPY+EQ+ A N
Sbjct:  132 GGFPFPEIDPTDPQAAVKVFWNLNWRPGAEGYVMPMVAWSRSQHGQLDRQFEFTSISSRYAQGE-HCLVPGYDEIKTKSLMEFRSPRDMAGAKNLSMTYVDHYQEDAGWLYMPEQRKPRRTLASERTSEVMGMDFTREDAMGFGGKVHEQNWTYLGTAPVLATMNVRDNPAAGGPHLWVPNNARWEVRTAHVLLIDPKADNHPYSHKLVFIDTETFWTLWMFAFDRQDDQLLRMNQHFLKYSESYATETPQQAPYLEQNLANN 393          
BLAST of mRNA_M-pyrifera_M_contig90355.20947.1 vs. uniprot
Match: A0A534S3W4_9DELT (DUF1329 domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534S3W4_9DELT)

HSP 1 Score: 357 bits (916), Expect = 3.130e-119
Identity = 161/263 (61.22%), Postives = 199/263 (75.67%), Query Frame = 1
Query:    1 GGFTFAEIEADDPMAGQKVIWNMLWRPGENDYVMPMVTWMRSENGVLDRKLEYTSVNSTYALGDDQCLVPGYEEVKNKRVMEFRSPRDMAGAKDLSIEYVDHYKENSGWMYVPAQRKPRRTLASERTSELMGMDMIREDINGFGGKVHENNWTYLGKRKVVATINVADNPEFGGPHLWVPNNARWEVRDTHVVLIEPKSSNHPYSARIVFIDAETWWTHWMFAFDRQDDQLLRMNQHFLKYSESYAHETPQQAPYIEQDFAKN 789
            GGF F +I+ +DP A  KV WN+ W PG +DY MPMV W R E G LDR+ E+ S  + YA GD  CLVPGYE VKNK +MEFRSPRD+AG + L IEY D YKEN  W+Y P QRKPRR L+SERTSE  GMD IRED  GFGGKVHE NW YLGK+ ++AT+NV  +PE GGPHLWVP+  RWE+R+ HV+ + PKS++HPY  +++F+DAE +WT WM A+DRQD QLLR+ Q FLKYSESYA E  +QAPY++ D+++N
Sbjct:  140 GGFPFPDIKPEDPQAAVKVFWNLYWHPGHSDYFMPMVAWGRGEGGRLDREFEFVSTAAEYAKGD-HCLVPGYEGVKNKSIMEFRSPRDLAGTRTLQIEYTDPYKENDSWLYSPVQRKPRRVLSSERTSETQGMDFIREDSMGFGGKVHEQNWAYLGKKWILATVNVPTHPEAGGPHLWVPHKTRWELRECHVLELVPKSASHPYGHKLIFVDAEIFWTLWMTAYDRQD-QLLRLGQDFLKYSESYATEEAKQAPYVQVDYSRN 400          
BLAST of mRNA_M-pyrifera_M_contig90355.20947.1 vs. uniprot
Match: A0A7Y4X6V4_9DELT (DUF1329 domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7Y4X6V4_9DELT)

HSP 1 Score: 341 bits (874), Expect = 4.870e-113
Identity = 154/263 (58.56%), Postives = 195/263 (74.14%), Query Frame = 1
Query:    1 GGFTFAEIEADDPMAGQKVIWNMLWRPGENDYVMPMVTWMRSENGVLDRKLEYTSVNSTYALGDDQCLVPGYEEVKNKRVMEFRSPRDMAGAKDLSIEYVDHYKENSGWMYVPAQRKPRRTLASERTSELMGMDMIREDINGFGGKVHENNWTYLGKRKVVATINVADNPEFGGPHLWVPNNARWEVRDTHVVLIEPKSSNHPYSARIVFIDAETWWTHWMFAFDRQDDQLLRMNQHFLKYSESYAHETPQQAPYIEQDFAKN 789
            GG+ F EI+ DDP    K+ WN  WRPG +DY MPMV W RSE+G LDR+ E+ S  + YA GD  CLV GYE VK+K +MEFRSPRD+AG ++L IEY D YKEN  W+Y P QRKPRR L+SERT E  GMD IRED  GFGGKVHE  W YLGK+ V+AT+NV  +P+ GGPHLWVPN  RWEVR+ HV+ + P+S++HPY  ++++IDAE +W  W+ A+D++  QLLR+ Q FLKYSESYA E  +QAPY++ D+ +N
Sbjct:  128 GGWPFPEIKGDDPYVALKIYWNSYWRPGHSDYFMPMVAWGRSEHGKLDREFEFVSTAAEYAKGD-HCLVEGYEGVKSKSIMEFRSPRDLAGTRNLQIEYTDPYKENDSWIYSPVQRKPRRVLSSERTGETQGMDFIREDNMGFGGKVHEQEWAYLGKKLVLATVNVPTHPDAGGPHLWVPNKTRWEVREVHVIELIPRSASHPYGNKLIYIDAEIFWNVWLTAYDKKG-QLLRIGQDFLKYSESYATEEGKQAPYVKVDYERN 388          
BLAST of mRNA_M-pyrifera_M_contig90355.20947.1 vs. uniprot
Match: A0A496WWU6_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A496WWU6_9GAMM)

HSP 1 Score: 223 bits (569), Expect = 1.460e-70
Identity = 98/122 (80.33%), Postives = 112/122 (91.80%), Query Frame = 1
Query:  424 GFGGKVHENNWTYLGKRKVVATINVADNPEFGGPHLWVPNNARWEVRDTHVVLIEPKSSNHPYSARIVFIDAETWWTHWMFAFDRQDDQLLRMNQHFLKYSESYAHETPQQAPYIEQDFAKN 789
            GFGGK++ENNWTYLG+RKV+ATINV+ NPEFGGP LWVP+  RWEVRDTHVVL++PK+ NHPYSARIVFIDAET+WTHWMFAFD+QDDQLLRMNQHFLKYSE Y  E P QAPYI+QDF+K+
Sbjct:    2 GFGGKIYENNWTYLGRRKVLATINVSTNPEFGGPSLWVPHKTRWEVRDTHVVLVQPKADNHPYSARIVFIDAETYWTHWMFAFDKQDDQLLRMNQHFLKYSEDYGTEPPTQAPYIKQDFSKS 123          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90355.20947.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3B9A938_9GAMM3.250e-15579.09Uncharacterized protein n=1 Tax=Porticoccaceae bac... [more]
A0A352Q471_9GAMM1.740e-15478.71Uncharacterized protein (Fragment) n=1 Tax=Portico... [more]
A0A2A5C013_9GAMM7.080e-15376.81Uncharacterized protein n=1 Tax=Cellvibrionales ba... [more]
A0A2E0LFZ6_9GAMM7.910e-15275.67Uncharacterized protein n=1 Tax=Porticoccaceae bac... [more]
A0A2E8K7E6_9GAMM3.830e-15075.29Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
A0A2E8J4B8_9GAMM7.440e-14975.67Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
A0A532DJZ1_9BACT4.560e-14271.86DUF1329 domain-containing protein n=1 Tax=Nitrospi... [more]
A0A534S3W4_9DELT3.130e-11961.22DUF1329 domain-containing protein n=1 Tax=Deltapro... [more]
A0A7Y4X6V4_9DELT4.870e-11358.56DUF1329 domain-containing protein n=1 Tax=Deltapro... [more]
A0A496WWU6_9GAMM1.460e-7080.33Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90355contigM-pyrifera_M_contig90355:3..791 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score101.7
Seed ortholog evalue5.5e-19
Seed eggNOG ortholog1198232.CYCME_2024
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Outer membrane lipoprotein-sorting protein
EggNOG OGs1QTHZ@1224,1SM2W@1236,2C4IG@1,2Z8A1@2
COG Functional cat.S
Best tax levelGammaproteobacteria
Best eggNOG OGNA|NA|NA
Exons1
Model size789
Cds size789
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816815.336224-CDS-M-pyrifera_M_contig90355:2..7911622816815.336224-CDS-M-pyrifera_M_contig90355:2..791Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90355 3..791 +
1692278194.8056726-CDS-M-pyrifera_M_contig90355:2..7911692278194.8056726-CDS-M-pyrifera_M_contig90355:2..791Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90355 3..791 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90355.20947.1prot_M-pyrifera_M_contig90355.20947.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90355 3..791 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90355.20947.1

>prot_M-pyrifera_M_contig90355.20947.1 ID=prot_M-pyrifera_M_contig90355.20947.1|Name=mRNA_M-pyrifera_M_contig90355.20947.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=263bp
GGFTFAEIEADDPMAGQKVIWNMLWRPGENDYVMPMVTWMRSENGVLDRK
LEYTSVNSTYALGDDQCLVPGYEEVKNKRVMEFRSPRDMAGAKDLSIEYV
DHYKENSGWMYVPAQRKPRRTLASERTSELMGMDMIREDINGFGGKVHEN
NWTYLGKRKVVATINVADNPEFGGPHLWVPNNARWEVRDTHVVLIEPKSS
NHPYSARIVFIDAETWWTHWMFAFDRQDDQLLRMNQHFLKYSESYAHETP
QQAPYIEQDFAKN
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mRNA from alignment at M-pyrifera_M_contig90355:3..791+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90355.20947.1 ID=mRNA_M-pyrifera_M_contig90355.20947.1|Name=mRNA_M-pyrifera_M_contig90355.20947.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=789bp|location=Sequence derived from alignment at M-pyrifera_M_contig90355:3..791+ (Macrocystis pyrifera P11B4 male)
GGCGGTTTCACGTTCGCGGAAATCGAGGCCGACGATCCGATGGCAGGCCA AAAAGTTATCTGGAACATGCTCTGGCGTCCCGGCGAGAACGACTACGTCA TGCCAATGGTCACGTGGATGCGCAGCGAGAACGGGGTACTCGATCGCAAA CTCGAATACACCTCGGTCAATTCGACCTACGCACTCGGTGACGACCAGTG TCTCGTGCCGGGTTACGAGGAGGTCAAGAACAAGCGCGTGATGGAATTCC GCTCCCCGCGCGATATGGCCGGCGCAAAAGATCTGTCGATCGAATACGTC GATCATTACAAGGAAAATTCAGGCTGGATGTATGTGCCGGCGCAGCGCAA GCCCCGCCGCACGCTTGCCTCGGAGCGTACGAGCGAACTCATGGGCATGG ACATGATCCGCGAAGACATCAACGGCTTCGGCGGCAAGGTCCACGAGAAC AACTGGACGTATCTTGGCAAACGCAAGGTTGTCGCAACTATCAACGTCGC CGACAACCCGGAGTTCGGCGGACCGCATTTATGGGTGCCGAATAATGCGC GGTGGGAAGTGCGCGATACGCACGTTGTATTGATCGAGCCGAAATCCAGC AATCATCCGTACAGCGCGCGCATTGTTTTCATCGATGCCGAAACGTGGTG GACGCACTGGATGTTCGCGTTCGACCGCCAGGATGATCAATTGCTGCGCA TGAACCAGCATTTTCTGAAGTACTCGGAATCCTACGCCCACGAAACGCCG CAGCAGGCGCCGTACATCGAACAGGATTTCGCGAAGAAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig90355:3..791+

>mRNA_M-pyrifera_M_contig90355.20947.1 ID=mRNA_M-pyrifera_M_contig90355.20947.1|Name=mRNA_M-pyrifera_M_contig90355.20947.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1578bp|location=Sequence derived from alignment at M-pyrifera_M_contig90355:3..791+ (Macrocystis pyrifera P11B4 male)
GGCGGTTTCACGTTCGCGGAAATCGAGGCCGACGATCCGATGGCAGGCCA
AAAAGTTATCTGGAACATGCTCTGGCGTCCCGGCGAGAACGACTACGTCA
TGCCAATGGTCACGTGGATGCGCAGCGAGAACGGGGTACTCGATCGCAAA
CTCGAATACACCTCGGTCAATTCGACCTACGCACTCGGTGACGACCAGTG
TCTCGTGCCGGGTTACGAGGAGGTCAAGAACAAGCGCGTGATGGAATTCC
GCTCCCCGCGCGATATGGCCGGCGCAAAAGATCTGTCGATCGAATACGTC
GATCATTACAAGGAAAATTCAGGCTGGATGTATGTGCCGGCGCAGCGCAA
GCCCCGCCGCACGCTTGCCTCGGAGCGTACGAGCGAACTCATGGGCATGG
ACATGATCCGCGAAGACATCAACGGCTTCGGCGGCAAGGTCCACGAGAAC
AACTGGACGTATCTTGGCAAACGCAAGGTTGTCGCAACTATCAACGTCGC
CGACAACCCGGAGTTCGGCGGACCGCATTTATGGGTGCCGAATAATGCGC
GGTGGGAAGTGCGCGATACGCACGTTGTATTGATCGAGCCGAAATCCAGC
AATCATCCGTACAGCGCGCGCATTGTTTTCATCGATGCCGAAACGTGGTG
GACGCACTGGATGTTCGCGTTCGACCGCCAGGATGATCAATTGCTGCGCA
TGAACCAGCATTTTCTGAAGTACTCGGAATCCTACGCCCACGAAACGCCG
CAGCAGGCGCCGTACATCGAACAGGATTTCGCGAAGAACGGCGGTTTCAC
GTTCGCGGAAATCGAGGCCGACGATCCGATGGCAGGCCAAAAAGTTATCT
GGAACATGCTCTGGCGTCCCGGCGAGAACGACTACGTCATGCCAATGGTC
ACGTGGATGCGCAGCGAGAACGGGGTACTCGATCGCAAACTCGAATACAC
CTCGGTCAATTCGACCTACGCACTCGGTGACGACCAGTGTCTCGTGCCGG
GTTACGAGGAGGTCAAGAACAAGCGCGTGATGGAATTCCGCTCCCCGCGC
GATATGGCCGGCGCAAAAGATCTGTCGATCGAATACGTCGATCATTACAA
GGAAAATTCAGGCTGGATGTATGTGCCGGCGCAGCGCAAGCCCCGCCGCA
CGCTTGCCTCGGAGCGTACGAGCGAACTCATGGGCATGGACATGATCCGC
GAAGACATCAACGGCTTCGGCGGCAAGGTCCACGAGAACAACTGGACGTA
TCTTGGCAAACGCAAGGTTGTCGCAACTATCAACGTCGCCGACAACCCGG
AGTTCGGCGGACCGCATTTATGGGTGCCGAATAATGCGCGGTGGGAAGTG
CGCGATACGCACGTTGTATTGATCGAGCCGAAATCCAGCAATCATCCGTA
CAGCGCGCGCATTGTTTTCATCGATGCCGAAACGTGGTGGACGCACTGGA
TGTTCGCGTTCGACCGCCAGGATGATCAATTGCTGCGCATGAACCAGCAT
TTTCTGAAGTACTCGGAATCCTACGCCCACGAAACGCCGCAGCAGGCGCC
GTACATCGAACAGGATTTCGCGAAGAAC
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