mRNA_M-pyrifera_M_contig90211.20917.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90211.20917.1
Unique NamemRNA_M-pyrifera_M_contig90211.20917.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig90211.20917.1 vs. uniprot
Match: A0A517PT10_9PLAN (Ferredoxin--NADP reductase n=4 Tax=Gimesia TaxID=1649453 RepID=A0A517PT10_9PLAN)

HSP 1 Score: 492 bits (1267), Expect = 2.490e-171
Identity = 242/243 (99.59%), Postives = 242/243 (99.59%), Query Frame = 1
Query:    1 AAKDDLFNMFHNKSDDFLDAVGAGRITIVGPPDDNQFNVFRSFDSDQEERIEPTLVVPAVGFQERLSELSEGHIQLSDFYLGCVHATYPDLFLVGFARPIIGNIPSISEVQARYICGLIAETFPRPADIEALHRADAISRKVRFKHLRLESIYPVEMFPYCDQLARLMNTLPTMTSIGSLSVWYRMQLTPATTLHYDYRDKPAFEEFGSTPVYMPKSLILILLLLKPFDLVYRAFRRLFQRRP 729
            AAKDDLFNMFHNKSDDFLDAVGAGRITIVGPPDDNQFNVFRSFDSDQEERIEPTLVVPAVGFQERLSELSEGHIQLSDFYLGCVHATYPDLFLVGFARPIIGNIPSISEVQARYICGLIAETFPRPADIEALHRADAISRKVRFKHLRLESIYPVEMFPYCDQLARLMNT PTMTSIGSLSVWYRMQLTPATTLHYDYRDKPAFEEFGSTPVYMPKSLILILLLLKPFDLVYRAFRRLFQRRP
Sbjct:  312 AAKDDLFNMFHNKSDDFLDAVGAGRITIVGPPDDNQFNVFRSFDSDQEERIEPTLVVPAVGFQERLSELSEGHIQLSDFYLGCVHATYPDLFLVGFARPIIGNIPSISEVQARYICGLIAETFPRPADIEALHRADAISRKVRFKHLRLESIYPVEMFPYCDQLARLMNTFPTMTSIGSLSVWYRMQLTPATTLHYDYRDKPAFEEFGSTPVYMPKSLILILLLLKPFDLVYRAFRRLFQRRP 554          
BLAST of mRNA_M-pyrifera_M_contig90211.20917.1 vs. uniprot
Match: A0A518FTB8_9PLAN (Ferredoxin--NADP reductase n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FTB8_9PLAN)

HSP 1 Score: 421 bits (1083), Expect = 1.940e-143
Identity = 201/241 (83.40%), Postives = 223/241 (92.53%), Query Frame = 1
Query:    1 AAKDDLFNMFHNKSDDFLDAVGAGRITIVGPPDDNQFNVFRSFDSDQEERIEPTLVVPAVGFQERLSELSEGHIQLSDFYLGCVHATYPDLFLVGFARPIIGNIPSISEVQARYICGLIAETFPRPADIEALHRADAISRKVRFKHLRLESIYPVEMFPYCDQLARLMNTLPTMTSIGSLSVWYRMQLTPATTLHYDYRDKPAFEEFGSTPVYMPKSLILILLLLKPFDLVYRAFRRLFQR 723
            AAKDDLFNMFHNKSDDFLDAV  GRITIVGPP+++QF VFRSFDSD EE IEPTLVVPAVG+QERLSELS GHIQLSDFY+GC+H T+PDLFLVGFARPIIGNIPSISEVQAR++CGLIAETFPRPA+I ALHRADA+SRKVR+KHLRLESIYPVEMFPYCDQLARLMNT PT+ SIGSL VW RMQLTPATTLHYD+R+KP+ E+  S PVYMP+SLI+ILL++KPFD VYR FRRLF+R
Sbjct:  312 AAKDDLFNMFHNKSDDFLDAVAEGRITIVGPPNNDQFTVFRSFDSDYEEHIEPTLVVPAVGYQERLSELSAGHIQLSDFYMGCIHTTHPDLFLVGFARPIIGNIPSISEVQARFVCGLIAETFPRPANIVALHRADALSRKVRYKHLRLESIYPVEMFPYCDQLARLMNTFPTLRSIGSLPVWCRMQLTPATTLHYDFREKPSSEQSASAPVYMPRSLIIILLVIKPFDFVYRTFRRLFKR 552          
BLAST of mRNA_M-pyrifera_M_contig90211.20917.1 vs. uniprot
Match: A6C4D9_9PLAN (Dimethylaniline monooxygenase (N-oxide forming) n=2 Tax=Gimesia maris TaxID=122 RepID=A6C4D9_9PLAN)

HSP 1 Score: 412 bits (1058), Expect = 1.180e-139
Identity = 196/240 (81.67%), Postives = 218/240 (90.83%), Query Frame = 1
Query:    4 AKDDLFNMFHNKSDDFLDAVGAGRITIVGPPDDNQFNVFRSFDSDQEERIEPTLVVPAVGFQERLSELSEGHIQLSDFYLGCVHATYPDLFLVGFARPIIGNIPSISEVQARYICGLIAETFPRPADIEALHRADAISRKVRFKHLRLESIYPVEMFPYCDQLARLMNTLPTMTSIGSLSVWYRMQLTPATTLHYDYRDKPAFEEFGSTPVYMPKSLILILLLLKPFDLVYRAFRRLFQR 723
            AKDDLFNMFHNKSDDFLDAV AGRITIVGPP DNQF VFR FDSDQEE IEP+LVVPAVG+Q RLSELSEGH+QLSDFYLGC+H TYPD+FLVGFARPIIGNIPSISEVQAR++CGLIAETFPRPA+IE LHRAD++ RKVR+K LRLESIYPVEMFPYCDQLARLMNT PT+ ++GSLSVW RMQLTPATT+HYDYR+  + E   +TPVYMP SLI+ILL++KPFD VYR FRRLF+R
Sbjct:  313 AKDDLFNMFHNKSDDFLDAVAAGRITIVGPPVDNQFTVFRRFDSDQEEHIEPSLVVPAVGYQGRLSELSEGHLQLSDFYLGCIHTTYPDMFLVGFARPIIGNIPSISEVQARFVCGLIAETFPRPANIETLHRADSLRRKVRYKELRLESIYPVEMFPYCDQLARLMNTFPTLRALGSLSVWCRMQLTPATTMHYDYRETQSRERDATTPVYMPGSLIIILLVIKPFDFVYRTFRRLFKR 552          
BLAST of mRNA_M-pyrifera_M_contig90211.20917.1 vs. uniprot
Match: A0A7Z9IBJ7_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7Z9IBJ7_9PLAN)

HSP 1 Score: 325 bits (832), Expect = 1.530e-106
Identity = 152/237 (64.14%), Postives = 189/237 (79.75%), Query Frame = 1
Query:    4 AKDDLFNMFHNKSDDFLDAVGAGRITIVGPPDDNQFNVFRSFDSDQEERIEPTLVVPAVGFQERLSELSEGHIQLSDFYLGCVHATYPDLFLVGFARPIIGNIPSISEVQARYICGLIAETFPRPADIEALHRADAISRKVRFKHLRLESIYPVEMFPYCDQLARLMNTLPTMTSIGSLSVWYRMQLTPATTLHYDYRDKPAFEEFGSTPVYMPKSLILILLLLKPFDLVYRAFRRL 714
            AKDDLFNMFHNKSDDFLDAV  GRITIVG P +NQF  F+ FDSD E  + P +VVPAVG++ +L +LS G I+L+DFYLGC H TYPDL+LVGFARPIIGNIP+ISE+Q+RY+C LIA   PRP+ IE LH+AD  +R +R+K + ++++YPVEM+PYCD+LA+ M T PT+ S+GSL  W RMQLTPATTLHY Y D  A E + S P+YMP +L+L+LL+LKP +LVYR FR L
Sbjct:  218 AKDDLFNMFHNKSDDFLDAVAEGRITIVGTPVNNQFTTFQVFDSDGEIEVVPDMVVPAVGYRPQLEDLSSGQIRLADFYLGCCHVTYPDLYLVGFARPIIGNIPTISEMQSRYVCSLIAGEVPRPSRIEELHQADRATRTIRYKKVNMDAVYPVEMYPYCDKLAKQMKTFPTLFSVGSLLSWCRMQLTPATTLHYVYCDAEARERYQSAPIYMPATLVLLLLMLKPLNLVYRVFRGL 454          
BLAST of mRNA_M-pyrifera_M_contig90211.20917.1 vs. uniprot
Match: A0A2G2KT40_9BACT (Uncharacterized protein n=1 Tax=Blastopirellula sp. TaxID=2024826 RepID=A0A2G2KT40_9BACT)

HSP 1 Score: 305 bits (782), Expect = 5.120e-98
Identity = 151/241 (62.66%), Postives = 181/241 (75.10%), Query Frame = 1
Query:    4 AKDDLFNMFHNKSDDFLDAVGAGRITIVGPPDDNQFNVFRSFDSDQEERIEPTLVVPAVGFQERLSELSEGHIQLSDFYLGCVHATYPDLFLVGFARPIIGNIPSISEVQARYICGLIAETFPRPADIEALHRADAISRKVRFKHLRLESIYPVEMFPYCDQLARLMNTLPTMTSIGSLSVWYRMQLTPATTLHYDYRDKPAFEEFGS-TPVYMPKSLILILLLLKPFDLVYRAFRRLFQR 723
            AKDDLFNMFHNKSDDFLDAVG  RI+I+G   DN+F  F  +DSDQE  + P L+VPAVG++  L+ELSEG IQL DFYLGC H  Y DLFLVGFARPIIGNIP+ISEVQA+++CG+I   + RP +IEA+HRAD+  RK+R+K+L  ES+YPVEMFPYCD L RLM+T PT+ S+GSL  W RMQL PATTLHY  RD+ A  +     P+YMP  LI ILL+LKP    Y A   + QR
Sbjct:  313 AKDDLFNMFHNKSDDFLDAVGDDRISIIGESIDNRFTTFHEYDSDQEIEVRPDLIVPAVGYRSILNELSEGEIQLPDFYLGCCHVNYSDLFLVGFARPIIGNIPTISEVQAQFVCGMIDGKYQRPEEIEAIHRADSDFRKLRYKNLNRESVYPVEMFPYCDHLTRLMHTFPTVKSVGSLFAWCRMQLAPATTLHY-LRDETAVRDSSKPVPIYMPPVLIAILLVLKPISWFYSACSWIRQR 552          
BLAST of mRNA_M-pyrifera_M_contig90211.20917.1 vs. uniprot
Match: A0A518CE55_9BACT (Dihydropyrimidine dehydrogenase subunit A n=2 Tax=Bremerella volcania TaxID=2527984 RepID=A0A518CE55_9BACT)

HSP 1 Score: 288 bits (736), Expect = 4.150e-91
Identity = 141/241 (58.51%), Postives = 171/241 (70.95%), Query Frame = 1
Query:    4 AKDDLFNMFHNKSDDFLDAVGAGRITIVGPPDDNQFNVFRSFDSDQEERIEPTLVVPAVGFQERLSELSEGHIQLSDFYLGCVHATYPDLFLVGFARPIIGNIPSISEVQARYICGLIAETFPRPADIEALHRADAISRKVRFKHLRLESIYPVEMFPYCDQLARLMNTLPTMTSIGSLSVWYRMQLTPATTLHYDYRDKPAFEEFGSTPVYMPKSLILILLLLKPFDLVYRAFRRLFQRR 726
            AKD+LFNMFHNKSDDFLD V  GRI IVG P D++   F  F SD++  + PT ++PAVG++  LS +S G + L+DFYLGCVH TYPDLFLVGFARP+IGNIPSISE+QA YI G+I  T PRP DI   H     +   R+  L LE IYPVEMFPYCD LAR M   PT+ + GSL  W R+QL PATT HY ++D+P    FGS PVYMP   +L+LLLLKP D  +R  RR+F+R+
Sbjct:  310 AKDELFNMFHNKSDDFLDGVADGRIKIVGEPVDDEMIRFYQFQSDEQVDVAPTKILPAVGYKSTLSAISGGTMSLADFYLGCVHVTYPDLFLVGFARPVIGNIPSISEMQANYITGIIGGTVPRPPDIAQEHALAQEANFARYPRLDLEIIYPVEMFPYCDYLARQMKIYPTVKTAGSLREWCRIQLQPATTAHYYFQDQPTHRFFGSAPVYMPSVFVLLLLLLKPLDWGFRIVRRVFRRQ 550          
BLAST of mRNA_M-pyrifera_M_contig90211.20917.1 vs. uniprot
Match: A0A518DZJ8_9BACT (FAD-containing monooxygenase MymA n=1 Tax=Lignipirellula cremea TaxID=2528010 RepID=A0A518DZJ8_9BACT)

HSP 1 Score: 283 bits (724), Expect = 3.920e-89
Identity = 141/240 (58.75%), Postives = 173/240 (72.08%), Query Frame = 1
Query:    1 AAKDDLFNMFHNKSDDFLDAVGAGRITIVGPPDDNQFNVFRSFDSDQEERIEPTLVVPAVGFQERLSELSEGHIQLSDFYLGCVHATYPDLFLVGFARPIIGNIPSISEVQARYICGLIAETFPRPADIEALHRADAISRKVRFKHLRLESIYPVEMFPYCDQLARLMNTLPTMTSIGSLSVWYRMQLTPATTLHY--DYRDKPAFEEFGS-TPVYMPKSLILILLLLKPFDLVYRAFRR 711
            AAKDDLFNMFHNKSDDFL AV   RI IVGP  D  +  FR+FD+D+E  I   L VPA+G++ RL EL +G ++L+DFYLGC H T+PDLFLVGFARP+IGNIPS+SE+QARY+CGL+A  FPRP ++ A+H AD   R+ +F  +  + I+ VEMFPYCDQLAR+M   PT   +GSLS W RMQL+PATT+HY  D     A +      PVYMP  L++ LL LKP D VYR FRR
Sbjct:  333 AAKDDLFNMFHNKSDDFLQAVADERIRIVGPALDRTYQRFRAFDADEELAIPADLAVPAIGYRARLQELFQGAVKLTDFYLGCCHTTFPDLFLVGFARPVIGNIPSMSEMQARYVCGLLAGKFPRPENLPAVHAADLARRRRQFGQIDFDRIFAVEMFPYCDQLARMMGAWPTYRELGSLSAWARMQLSPATTMHYTGDLSGTVAPDAAREWQPVYMPALLVMFLLGLKPLDAVYRLFRR 572          
BLAST of mRNA_M-pyrifera_M_contig90211.20917.1 vs. uniprot
Match: A0A2S8FN13_9BACT (Uncharacterized protein n=1 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8FN13_9BACT)

HSP 1 Score: 281 bits (720), Expect = 9.070e-89
Identity = 137/241 (56.85%), Postives = 171/241 (70.95%), Query Frame = 1
Query:    4 AKDDLFNMFHNKSDDFLDAVGAGRITIVGPPDDNQFNVFRSFDSDQEERIEPTLVVPAVGFQERLSELSEGHIQLSDFYLGCVHATYPDLFLVGFARPIIGNIPSISEVQARYICGLIAETFPRPADIEALHRADAISRKVRFKHLRLESIYPVEMFPYCDQLARLMNTLPTMTSIGSLSVWYRMQLTPATTLHYDYRDKPAFEEFGSTPVYMPKSLILILLLLKPFDLVYRAFRRLFQRR 726
            AKD+LFNMFHNKSDDFLD V  GRI IVG P D++ + F  F S ++  + PT ++PAVG++  L+E+S G ++L+DFYLGCVHAT P L+LVGFARP+IGNIPSISE+QA YI  LI+ + PRP DI   H     +   R+  L LE IYPVEMFPYCD LAR M   PT+ + GSL  W+R+QL PATT HY Y+D+P    FG  PVYMP   +L+LL+LKP D  +R  RRLF R+
Sbjct:  305 AKDELFNMFHNKSDDFLDGVADGRIKIVGEPVDDEMSRFYEFQSSEQVEVAPTKILPAVGYKSTLAEISGGAMRLADFYLGCVHATCPGLYLVGFARPVIGNIPSISEMQANYIAALISGSVPRPNDIVQEHALAQEANYARYPRLDLEIIYPVEMFPYCDYLARQMKIYPTVKTAGSLREWWRIQLQPATTAHYYYQDEPTHRFFGDAPVYMPSVFVLLLLMLKPLDWGFRLVRRLFGRQ 545          
BLAST of mRNA_M-pyrifera_M_contig90211.20917.1 vs. uniprot
Match: A0A2S8F353_9BACT (Uncharacterized protein n=2 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8F353_9BACT)

HSP 1 Score: 268 bits (685), Expect = 1.520e-83
Identity = 131/240 (54.58%), Postives = 166/240 (69.17%), Query Frame = 1
Query:    4 AKDDLFNMFHNKSDDFLDAVGAGRITIVGPPDDNQFNVFRSFDSDQEERIEPTLVVPAVGFQERLSELSEGHIQLSDFYLGCVHATYPDLFLVGFARPIIGNIPSISEVQARYICGLIAETFPRPADIEALHRADAISRKVRFKHLRLESIYPVEMFPYCDQLARLMNTLPTMTSIGSLSVWYRMQLTPATTLHYDYRDKPAFEEFGSTPVYMPKSLILILLLLKPFDLVYRAFRRLFQR 723
            AKD+LFNMFHNKSDDFLD V  G+ITI+G P D+Q N F  F S +E  + PT V+PA+G++  L+ ++   + L+ FYLGCVH + PDLFLVGFARPIIGNIPSISE+QA Y+ GLI+  + RP +I   H         R+  L LE IYPVEMFPYCD LAR MN  P++  +GS   W+R+QL PATT HY Y D+     F + P+YMP  L+ +LLLLKP D  +RA RRL++R
Sbjct:  307 AKDELFNMFHNKSDDFLDRVARGQITIIGLPVDDQMNRFYQFQSQEEIEVNPTKVLPAIGYRSTLTAIAGESLTLASFYLGCVHVSDPDLFLVGFARPIIGNIPSISEMQAAYVTGLISGHYSRPNEIAERHALAQQENLARYSKLDLEIIYPVEMFPYCDYLARQMNLYPSLRRVGSWRDWWRLQLAPATTAHYLYDDEKIRRFFATAPIYMPTLLVTLLLLLKPVDWTFRAVRRLWRR 546          
BLAST of mRNA_M-pyrifera_M_contig90211.20917.1 vs. uniprot
Match: A0A5B1CL70_9BACT (Flavin-binding monooxygenase-like protein n=1 Tax=Rubripirellula obstinata TaxID=406547 RepID=A0A5B1CL70_9BACT)

HSP 1 Score: 262 bits (670), Expect = 1.720e-80
Identity = 131/241 (54.36%), Postives = 168/241 (69.71%), Query Frame = 1
Query:    1 AAKDDLFNMFHNKSDDFLDAVGAGRITIVGPPDDNQFNVFRSFDSDQEE---RIEPTLVVPAVGFQERLSELSEGHIQLSDFYLGCVHATYPDLFLVGFARPIIGNIPSISEVQARYICGLIAETFPRPADIEALHRADAISRKVRFKHLRLESIYPVEMFPYCDQLARLMNTLPTMTSIGSLSVWYRMQLTPATTLHYDYRDKPAFEEFGSTPVYMPKSLILILLLLKPFDLVYRAFRRL 714
            AAKD LF+MFHNKSDDFLDAV  G + IVG P D   NVFR+F     E   ++ P L+VPA+G++  L ELS G I++ DFYLGCVH  +P+LFLVGFARP+IGNIP+ISE+Q+RY+ GLIA    RPADI  LH+ +  +   RFK L L++IYPVEMFPYCD+LA++M T+P    +G L  W++ QLTPATT +Y +             +Y+P SLI +LLLLKP D  YR +R+L
Sbjct:  384 AAKDQLFDMFHNKSDDFLDAVANGDLEIVGSPTDETANVFRAFGDRTGEDLVQVNPDLIVPAIGYRSTLDELSNGTIRIGDFYLGCVHVEHPNLFLVGFARPVIGNIPTISEMQSRYVVGLIAGLHQRPADIATLHQNEIEALSNRFKTLDLDAIYPVEMFPYCDELAKMMGTMPK-PRLGGLWRWWKQQLTPATTRYYPHSGSNQLCTVDDQSIYLPASLIALLLLLKPIDWAYRVYRKL 623          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90211.20917.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517PT10_9PLAN2.490e-17199.59Ferredoxin--NADP reductase n=4 Tax=Gimesia TaxID=1... [more]
A0A518FTB8_9PLAN1.940e-14383.40Ferredoxin--NADP reductase n=2 Tax=Gimesia panaree... [more]
A6C4D9_9PLAN1.180e-13981.67Dimethylaniline monooxygenase (N-oxide forming) n=... [more]
A0A7Z9IBJ7_9PLAN1.530e-10664.14Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
A0A2G2KT40_9BACT5.120e-9862.66Uncharacterized protein n=1 Tax=Blastopirellula sp... [more]
A0A518CE55_9BACT4.150e-9158.51Dihydropyrimidine dehydrogenase subunit A n=2 Tax=... [more]
A0A518DZJ8_9BACT3.920e-8958.75FAD-containing monooxygenase MymA n=1 Tax=Lignipir... [more]
A0A2S8FN13_9BACT9.070e-8956.85Uncharacterized protein n=1 Tax=Blastopirellula ma... [more]
A0A2S8F353_9BACT1.520e-8354.58Uncharacterized protein n=2 Tax=Blastopirellula ma... [more]
A0A5B1CL70_9BACT1.720e-8054.36Flavin-binding monooxygenase-like protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90211contigM-pyrifera_M_contig90211:63..794 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score396.4
Seed ortholog evalue9.6e-108
Seed eggNOG ortholog344747.PM8797T_25281
KEGG rclassRC00011
KEGG koko:K03388
KEGG ReactionR04540,R11928,R11931,R11943,R11944
KEGG Pathwayko00680,ko01100,ko01120,ko01200,map00680,map01100,map01120,map01200
KEGG ModuleM00356,M00357,M00563,M00567
Hectar predicted targeting categoryother localisation
EggNOG free text desc.N,N-dimethylaniline monooxygenase activity
EggNOG OGsCOG2072@1,COG2072@2
EC1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6
COG Functional cat.P
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size732
Cds size708
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816813.8537369-CDS-M-pyrifera_M_contig90211:62..7701622816813.8537369-CDS-M-pyrifera_M_contig90211:62..770Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90211 63..770 -
1692278193.9249814-CDS-M-pyrifera_M_contig90211:62..7701692278193.9249814-CDS-M-pyrifera_M_contig90211:62..770Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90211 63..770 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816813.8657813-UTR-M-pyrifera_M_contig90211:770..7941622816813.8657813-UTR-M-pyrifera_M_contig90211:770..794Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig90211 771..794 -
1692278193.9366186-UTR-M-pyrifera_M_contig90211:770..7941692278193.9366186-UTR-M-pyrifera_M_contig90211:770..794Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig90211 771..794 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90211.20917.1prot_M-pyrifera_M_contig90211.20917.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90211 63..770 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90211.20917.1

>prot_M-pyrifera_M_contig90211.20917.1 ID=prot_M-pyrifera_M_contig90211.20917.1|Name=mRNA_M-pyrifera_M_contig90211.20917.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=236bp
MFHNKSDDFLDAVGAGRITIVGPPDDNQFNVFRSFDSDQEERIEPTLVVP
AVGFQERLSELSEGHIQLSDFYLGCVHATYPDLFLVGFARPIIGNIPSIS
EVQARYICGLIAETFPRPADIEALHRADAISRKVRFKHLRLESIYPVEMF
PYCDQLARLMNTLPTMTSIGSLSVWYRMQLTPATTLHYDYRDKPAFEEFG
STPVYMPKSLILILLLLKPFDLVYRAFRRLFQRRP*
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mRNA from alignment at M-pyrifera_M_contig90211:63..794-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90211.20917.1 ID=mRNA_M-pyrifera_M_contig90211.20917.1|Name=mRNA_M-pyrifera_M_contig90211.20917.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=732bp|location=Sequence derived from alignment at M-pyrifera_M_contig90211:63..794- (Macrocystis pyrifera P11B4 male)
GCGGCTAAAGATGACTTGTTCAATATGTTTCATAACAAGAGCGATGATTT TTTAGATGCTGTCGGAGCAGGCAGGATTACCATTGTCGGGCCTCCTGATG ACAATCAGTTCAATGTGTTTCGCAGTTTTGATTCCGATCAGGAAGAGCGT ATCGAGCCGACGCTTGTTGTTCCGGCAGTGGGGTTCCAGGAGAGGCTGAG TGAATTGTCGGAAGGACACATTCAACTTTCGGACTTTTACCTGGGCTGCG TACATGCAACTTATCCTGACTTGTTCCTTGTCGGTTTCGCGCGTCCGATT ATTGGGAACATCCCATCCATCAGTGAGGTGCAGGCACGTTATATTTGCGG GTTAATCGCCGAAACATTTCCTCGTCCTGCTGATATCGAGGCACTGCATC GGGCAGATGCGATCAGCAGAAAAGTTCGCTTTAAGCACTTAAGACTGGAG TCCATTTACCCGGTGGAGATGTTTCCATATTGTGATCAACTTGCCAGACT GATGAATACGTTGCCAACGATGACTTCTATCGGCTCTTTGTCTGTCTGGT ATCGCATGCAGCTGACTCCAGCAACAACACTGCATTACGACTATCGTGAT AAGCCAGCATTCGAAGAGTTTGGCTCCACTCCTGTCTATATGCCCAAGTC GTTAATCCTGATCCTGCTGTTGCTCAAGCCATTCGACCTCGTGTACCGAG CTTTTAGAAGATTGTTCCAACGAAGACCCTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig90211:63..794-

>mRNA_M-pyrifera_M_contig90211.20917.1 ID=mRNA_M-pyrifera_M_contig90211.20917.1|Name=mRNA_M-pyrifera_M_contig90211.20917.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1416bp|location=Sequence derived from alignment at M-pyrifera_M_contig90211:63..794- (Macrocystis pyrifera P11B4 male)
ATGTTTCATAACAAGAGCGATGATTTTTTAGATGCTGTCGGAGCAGGCAG
GATTACCATTGTCGGGCCTCCTGATGACAATCAGTTCAATGTGTTTCGCA
GTTTTGATTCCGATCAGGAAGAGCGTATCGAGCCGACGCTTGTTGTTCCG
GCAGTGGGGTTCCAGGAGAGGCTGAGTGAATTGTCGGAAGGACACATTCA
ACTTTCGGACTTTTACCTGGGCTGCGTACATGCAACTTATCCTGACTTGT
TCCTTGTCGGTTTCGCGCGTCCGATTATTGGGAACATCCCATCCATCAGT
GAGGTGCAGGCACGTTATATTTGCGGGTTAATCGCCGAAACATTTCCTCG
TCCTGCTGATATCGAGGCACTGCATCGGGCAGATGCGATCAGCAGAAAAG
TTCGCTTTAAGCACTTAAGACTGGAGTCCATTTACCCGGTGGAGATGTTT
CCATATTGTGATCAACTTGCCAGACTGATGAATACGTTGCCAACGATGAC
TTCTATCGGCTCTTTGTCTGTCTGGTATCGCATGCAGCTGACTCCAGCAA
CAACACTGCATTACGACTATCGTGATAAGCCAGCATTCGAAGAGTTTGGC
TCCACTCCTGTCTATATGCCCAAGTCGTTAATCCTGATCCTGCTGTTGCT
CAAGCCATTCGACCTCGTGTACCGAGCTTTTAGAAGATTGTTCCAACGAA
GACCCTAAATGTTTCATAACAAGAGCGATGATTTTTTAGATGCTGTCGGA
GCAGGCAGGATTACCATTGTCGGGCCTCCTGATGACAATCAGTTCAATGT
GTTTCGCAGTTTTGATTCCGATCAGGAAGAGCGTATCGAGCCGACGCTTG
TTGTTCCGGCAGTGGGGTTCCAGGAGAGGCTGAGTGAATTGTCGGAAGGA
CACATTCAACTTTCGGACTTTTACCTGGGCTGCGTACATGCAACTTATCC
TGACTTGTTCCTTGTCGGTTTCGCGCGTCCGATTATTGGGAACATCCCAT
CCATCAGTGAGGTGCAGGCACGTTATATTTGCGGGTTAATCGCCGAAACA
TTTCCTCGTCCTGCTGATATCGAGGCACTGCATCGGGCAGATGCGATCAG
CAGAAAAGTTCGCTTTAAGCACTTAAGACTGGAGTCCATTTACCCGGTGG
AGATGTTTCCATATTGTGATCAACTTGCCAGACTGATGAATACGTTGCCA
ACGATGACTTCTATCGGCTCTTTGTCTGTCTGGTATCGCATGCAGCTGAC
TCCAGCAACAACACTGCATTACGACTATCGTGATAAGCCAGCATTCGAAG
AGTTTGGCTCCACTCCTGTCTATATGCCCAAGTCGTTAATCCTGATCCTG
CTGTTGCTCAAGCCATTCGACCTCGTGTACCGAGCTTTTAGAAGATTGTT
CCAACGAAGACCCTAA
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