mRNA_M-pyrifera_M_contig90199.20909.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90199.20909.1
Unique NamemRNA_M-pyrifera_M_contig90199.20909.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig90199.20909.1 vs. uniprot
Match: A0A4U0XPY8_9PEZI (Uncharacterized protein n=3 Tax=Friedmanniomyces TaxID=329881 RepID=A0A4U0XPY8_9PEZI)

HSP 1 Score: 58.2 bits (139), Expect = 1.850e-8
Identity = 32/59 (54.24%), Postives = 40/59 (67.80%), Query Frame = 1
Query:   16 VEGRRVILASASPRRKELLEYL-IDDFEVISSACEEDLPKTDGAEAYVLNTAKLKARTV 189
            + GRRVILASASPRR+++L  + + D E+I S   EDLPK+     YVL TA  KAR V
Sbjct:   49 IRGRRVILASASPRRRQILAQIGLTDLEIIPSTAPEDLPKSLPPFEYVLQTAAQKARNV 107          
BLAST of mRNA_M-pyrifera_M_contig90199.20909.1 vs. uniprot
Match: A0A2B7WVW8_9EURO (Septum formation protein Maf n=1 Tax=Helicocarpus griseus UAMH5409 TaxID=1447875 RepID=A0A2B7WVW8_9EURO)

HSP 1 Score: 57.8 bits (138), Expect = 2.580e-8
Identity = 31/60 (51.67%), Postives = 43/60 (71.67%), Query Frame = 1
Query:   13 SVEGRRVILASASPRRKELLEYL-IDDFEVISSACEEDLPKTDGAEAYVLNTAKLKARTV 189
            ++  +RVILAS+SPRR+++L YL + + E+I SA  EDLPKT     Y L TA +KA+TV
Sbjct:   39 NLRSKRVILASSSPRRRQILSYLGLTNLEIIPSAFPEDLPKTLSPFEYCLQTAIMKAQTV 98          
BLAST of mRNA_M-pyrifera_M_contig90199.20909.1 vs. uniprot
Match: A0A6G1G6L4_9PEZI (Maf/Ham1 (Fragment) n=1 Tax=Eremomyces bilateralis CBS 781.70 TaxID=1392243 RepID=A0A6G1G6L4_9PEZI)

HSP 1 Score: 57.8 bits (138), Expect = 2.600e-8
Identity = 31/59 (52.54%), Postives = 39/59 (66.10%), Query Frame = 1
Query:   13 SVEGRRVILASASPRRKELLEYLIDDFEVISSACEEDLPKTDGAEAYVLNTAKLKARTV 189
            +++ +RVILASASPRRK++L  L    E+I S   EDLPK+ G   YVL TA  K R V
Sbjct:   35 ALKSQRVILASASPRRKQILSQLFPKVEIIPSTFAEDLPKSLGGFDYVLQTAVAKCREV 93          
BLAST of mRNA_M-pyrifera_M_contig90199.20909.1 vs. uniprot
Match: M2LVL7_BAUPA (Uncharacterized protein (Fragment) n=1 Tax=Baudoinia panamericana (strain UAMH 10762) TaxID=717646 RepID=M2LVL7_BAUPA)

HSP 1 Score: 57.4 bits (137), Expect = 3.260e-8
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 1
Query:   16 VEGRRVILASASPRRKELLEYL-IDDFEVISSACEEDLPKTDGAEAYVLNTAKLKARTV 189
            + G+R+ILASASPRR++LL  + + D E+I S   ED  K+ G  AYVL TA+ KAR V
Sbjct:   47 IRGKRIILASASPRRRQLLAQIGLTDLEIIPSTLPEDRDKSLGPFAYVLETAEQKARNV 105          
BLAST of mRNA_M-pyrifera_M_contig90199.20909.1 vs. uniprot
Match: A0A6A6FY53_9PEZI (Inosine triphosphate pyrophosphatase-like protein n=2 Tax=Elsinoe TaxID=40996 RepID=A0A6A6FY53_9PEZI)

HSP 1 Score: 57.4 bits (137), Expect = 3.420e-8
Identity = 32/60 (53.33%), Postives = 41/60 (68.33%), Query Frame = 1
Query:   13 SVEGRRVILASASPRRKELLEYL-IDDFEVISSACEEDLPKTDGAEAYVLNTAKLKARTV 189
            S++G+RVILASASPRRK+LL  + + D E+I S   ED PK+     YVL TA+ KA  V
Sbjct:   42 SLKGKRVILASASPRRKQLLAQIGLTDVEIIPSGAPEDFPKSLSPFEYVLRTAESKAMAV 101          
BLAST of mRNA_M-pyrifera_M_contig90199.20909.1 vs. uniprot
Match: A0A225B4K1_9EURO (Uncharacterized protein n=1 Tax=Talaromyces atroroseus TaxID=1441469 RepID=A0A225B4K1_9EURO)

HSP 1 Score: 57.4 bits (137), Expect = 3.590e-8
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 1
Query:   16 VEGRRVILASASPRRKELLEYL-IDDFEVISSACEEDLPKTDGAEAYVLNTAKLKARTV 189
            +  +RVILAS SPRRK+++ YL + D E+I S   EDLPK+ G   YVL TA  KA+T+
Sbjct:   45 LRSKRVILASQSPRRKQIMSYLGLPDLEIIPSTEPEDLPKSLGPFEYVLATATKKAQTI 103          
BLAST of mRNA_M-pyrifera_M_contig90199.20909.1 vs. uniprot
Match: S0JAF6_9ENTE (dTTP/UTP pyrophosphatase n=1 Tax=Enterococcus saccharolyticus subsp. saccharolyticus ATCC 43076 TaxID=1139996 RepID=S0JAF6_9ENTE)

HSP 1 Score: 56.2 bits (134), Expect = 4.500e-8
Identity = 27/53 (50.94%), Postives = 38/53 (71.70%), Query Frame = 1
Query:   31 VILASASPRRKELLEYLIDDFEVISSACEEDLPKTDGAEAYVLNTAKLKARTV 189
            +ILAS SPRRKELL+ L+D+FE+I +  +E +  +D  + YVL  AK KAR +
Sbjct:    3 IILASQSPRRKELLQLLVDEFEIIPADIDETIQPSDEPKEYVLRMAKEKARVI 55          
BLAST of mRNA_M-pyrifera_M_contig90199.20909.1 vs. uniprot
Match: A0A6J3MD03_9PEZI (Maf-like protein n=1 Tax=Dissoconium aciculare CBS 342.82 TaxID=1314786 RepID=A0A6J3MD03_9PEZI)

HSP 1 Score: 56.2 bits (134), Expect = 9.180e-8
Identity = 30/59 (50.85%), Postives = 41/59 (69.49%), Query Frame = 1
Query:   16 VEGRRVILASASPRRKELLEYL-IDDFEVISSACEEDLPKTDGAEAYVLNTAKLKARTV 189
            + GRR+ILASASPRR++LL  + + + E++ S   ED  K+ G   YVL TA+ KARTV
Sbjct:   46 IRGRRIILASASPRRRQLLAQIGLTNLEIVPSTVPEDEDKSLGPFEYVLETAQTKARTV 104          
BLAST of mRNA_M-pyrifera_M_contig90199.20909.1 vs. uniprot
Match: A0A6A6UB30_9PEZI (Septum formation protein n=1 Tax=Microthyrium microscopicum TaxID=703497 RepID=A0A6A6UB30_9PEZI)

HSP 1 Score: 55.8 bits (133), Expect = 1.250e-7
Identity = 32/60 (53.33%), Postives = 41/60 (68.33%), Query Frame = 1
Query:   13 SVEGRRVILASASPRRKELLEYL-IDDFEVISSACEEDLPKTDGAEAYVLNTAKLKARTV 189
            S+ G+RVILASASPRR++LL  + + + E+I SA  EDLPK+     YVL TA  KA  V
Sbjct:   42 SLRGKRVILASASPRRRQLLAQIGLTNLEIIPSAFAEDLPKSGAPFDYVLETATQKALKV 101          
BLAST of mRNA_M-pyrifera_M_contig90199.20909.1 vs. uniprot
Match: A0A1V6Q7C8_9EURO (Uncharacterized protein n=2 Tax=Penicillium TaxID=5073 RepID=A0A1V6Q7C8_9EURO)

HSP 1 Score: 55.8 bits (133), Expect = 1.320e-7
Identity = 31/60 (51.67%), Postives = 41/60 (68.33%), Query Frame = 1
Query:   13 SVEGRRVILASASPRRKELLEYL-IDDFEVISSACEEDLPKTDGAEAYVLNTAKLKARTV 189
            S+  RRVILAS SPRR+++L +L   + E+I S  +EDLPK+ G   YVL TA  KA+ V
Sbjct:   46 SLRNRRVILASQSPRRRQILSFLGFPNLEIIPSNADEDLPKSLGPFEYVLATATKKAQAV 105          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90199.20909.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4U0XPY8_9PEZI1.850e-854.24Uncharacterized protein n=3 Tax=Friedmanniomyces T... [more]
A0A2B7WVW8_9EURO2.580e-851.67Septum formation protein Maf n=1 Tax=Helicocarpus ... [more]
A0A6G1G6L4_9PEZI2.600e-852.54Maf/Ham1 (Fragment) n=1 Tax=Eremomyces bilateralis... [more]
M2LVL7_BAUPA3.260e-852.54Uncharacterized protein (Fragment) n=1 Tax=Baudoin... [more]
A0A6A6FY53_9PEZI3.420e-853.33Inosine triphosphate pyrophosphatase-like protein ... [more]
A0A225B4K1_9EURO3.590e-852.54Uncharacterized protein n=1 Tax=Talaromyces atroro... [more]
S0JAF6_9ENTE4.500e-850.94dTTP/UTP pyrophosphatase n=1 Tax=Enterococcus sacc... [more]
A0A6J3MD03_9PEZI9.180e-850.85Maf-like protein n=1 Tax=Dissoconium aciculare CBS... [more]
A0A6A6UB30_9PEZI1.250e-753.33Septum formation protein n=1 Tax=Microthyrium micr... [more]
A0A1V6Q7C8_9EURO1.320e-751.67Uncharacterized protein n=2 Tax=Penicillium TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90199contigM-pyrifera_M_contig90199:516..704 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size189
Cds size189
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816813.30285-CDS-M-pyrifera_M_contig90199:515..7041622816813.30285-CDS-M-pyrifera_M_contig90199:515..704Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90199 516..704 +
1692278193.5477211-CDS-M-pyrifera_M_contig90199:515..7041692278193.5477211-CDS-M-pyrifera_M_contig90199:515..704Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90199 516..704 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90199.20909.1prot_M-pyrifera_M_contig90199.20909.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90199 516..704 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90199.20909.1

>prot_M-pyrifera_M_contig90199.20909.1 ID=prot_M-pyrifera_M_contig90199.20909.1|Name=mRNA_M-pyrifera_M_contig90199.20909.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=63bp
MDDFSVEGRRVILASASPRRKELLEYLIDDFEVISSACEEDLPKTDGAEA
YVLNTAKLKARTV
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mRNA from alignment at M-pyrifera_M_contig90199:516..704+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90199.20909.1 ID=mRNA_M-pyrifera_M_contig90199.20909.1|Name=mRNA_M-pyrifera_M_contig90199.20909.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=189bp|location=Sequence derived from alignment at M-pyrifera_M_contig90199:516..704+ (Macrocystis pyrifera P11B4 male)
ATGGATGATTTCTCTGTGGAAGGACGTCGTGTGATCTTGGCCTCTGCGAG TCCACGGAGAAAAGAGTTGCTGGAATACCTGATTGACGATTTCGAAGTAA TCTCGTCAGCTTGTGAAGAAGATTTACCAAAGACTGATGGAGCTGAGGCA TATGTGTTGAATACGGCGAAGTTGAAGGCAAGAACGGTA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig90199:516..704+

>mRNA_M-pyrifera_M_contig90199.20909.1 ID=mRNA_M-pyrifera_M_contig90199.20909.1|Name=mRNA_M-pyrifera_M_contig90199.20909.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=378bp|location=Sequence derived from alignment at M-pyrifera_M_contig90199:516..704+ (Macrocystis pyrifera P11B4 male)
ATGGATGATTTCTCTGTGGAAGGACGTCGTGTGATCTTGGCCTCTGCGAG
TCCACGGAGAAAAGAGTTGCTGGAATACCTGATTGACGATTTCGAAGTAA
TCTCGTCAGCTTGTGAAGAAGATTTACCAAAGACTGATGGAGCTGAGGCA
TATGTGTTGAATACGGCGAAGTTGAAGGCAAGAACGGTAATGGATGATTT
CTCTGTGGAAGGACGTCGTGTGATCTTGGCCTCTGCGAGTCCACGGAGAA
AAGAGTTGCTGGAATACCTGATTGACGATTTCGAAGTAATCTCGTCAGCT
TGTGAAGAAGATTTACCAAAGACTGATGGAGCTGAGGCATATGTGTTGAA
TACGGCGAAGTTGAAGGCAAGAACGGTA
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