mRNA_M-pyrifera_M_contig90191.20906.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90191.20906.1
Unique NamemRNA_M-pyrifera_M_contig90191.20906.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig90191.20906.1 vs. uniprot
Match: A0A7C1WUT4_9BACT (Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C1WUT4_9BACT)

HSP 1 Score: 393 bits (1010), Expect = 4.830e-135
Identity = 202/242 (83.47%), Postives = 217/242 (89.67%), Query Frame = 1
Query:    1 SKADCTKHLDAGAKKVLLTVPPKDEIDNMIVLGVNDHKLKATDRIISNASCTTNCLGPIAKVLHENFGIVGGLMTTVHAYTNDQRILDLPHSDLRRARAAAANIIPTSTGAARAVGKVLPQLAGKLDGCAMRVPVPDGSVVDLVATTKKKVTVEAVNAAMKAAAKKDMKGILEYTEDPLVSSDIVGNPYSSIFDALSTMVMGSNMVKVVSWYDNEWGYSNRVVELMKKAHGLKAKAKKTKKK 726
            ++A CTKHL+AGAKKVLLTVPPKDEID M+VLGVN  KLKATDRIISNASCTTNCL P+AKVL ++FGIV GLMTTVHAYTNDQR LDLPH DLRRARAAAANIIPTSTGAARAVGKVLP+LAGKLDGCAMRVPVPDGSVVDLV  TKKKVTVE+VNAA K AAKK +KGIL YTEDP+VSSDIVG+P SSIFDALST+VMG  MVKV+SWYDNEWGYSNRVVELMK +H LK    K KKK
Sbjct:  102 TRAACTKHLEAGAKKVLLTVPPKDEIDAMVVLGVNQEKLKATDRIISNASCTTNCLSPLAKVLDDSFGIVHGLMTTVHAYTNDQRTLDLPHKDLRRARAAAANIIPTSTGAARAVGKVLPRLAGKLDGCAMRVPVPDGSVVDLVCETKKKVTVESVNAAFKEAAKKSLKGILAYTEDPIVSSDIVGHPASSIFDALSTLVMGDRMVKVISWYDNEWGYSNRVVELMKFSHSLKGSRGKAKKK 343          
BLAST of mRNA_M-pyrifera_M_contig90191.20906.1 vs. uniprot
Match: A0A2E5X674_9BACT (Glyceraldehyde-3-phosphate dehydrogenase n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E5X674_9BACT)

HSP 1 Score: 375 bits (964), Expect = 3.720e-128
Identity = 194/251 (77.29%), Postives = 216/251 (86.06%), Query Frame = 1
Query:    1 SKADCTKHLDAGAKKVLLTVPPKDEIDNMIVLGVNDHKLKATDRIISNASCTTNCLGPIAKVLHENFGIVGGLMTTVHAYTNDQRILDLPHSDLRRARAAAANIIPTSTGAARAVGKVLPQLAGKLDGCAMRVPVPDGSVVDLVATTKKKVTVEAVNAAMKAAAKKDMKGILEYTEDPLVSSDIVGNPYSSIFDALSTMVMGSNMVKVVSWYDNEWGYSNRVVELMKKAHGLKAKAKKTKKKTGRKLAKRA 753
            +KA C+KHL AGAKKVLLTVPPKDEID MIVLGVND  L+ + +IISNASCTTNCL P+ KVL   FG+V GLMTTVHAYTNDQRILDLPH DLRRAR+AAANIIPT+TGAARAVGK+LP+LAGKLDGCAMRVPVPDGSVVDLVA  K++VTVE VNAA  AAAKKD+KG+LEYTEDP+VSSDIVGNP+SSIFDA  TMVM    VKV+SWYDNEWGYSNRVVELM+ AH LK K ++ K    +K AKRA
Sbjct:  100 TKAACSKHLTAGAKKVLLTVPPKDEIDAMIVLGVNDKALRPSHKIISNASCTTNCLAPLVKVLDAKFGLVNGLMTTVHAYTNDQRILDLPHGDLRRARSAAANIIPTTTGAARAVGKILPKLAGKLDGCAMRVPVPDGSVVDLVANLKRRVTVEEVNAAFAAAAKKDLKGVLEYTEDPIVSSDIVGNPHSSIFDAKCTMVMAGKQVKVISWYDNEWGYSNRVVELMRLAHSLKPK-RRAKGPARKKTAKRA 349          
BLAST of mRNA_M-pyrifera_M_contig90191.20906.1 vs. uniprot
Match: A0A7V7MIK4_9BACT (Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V7MIK4_9BACT)

HSP 1 Score: 363 bits (932), Expect = 1.740e-123
Identity = 183/232 (78.88%), Postives = 203/232 (87.50%), Query Frame = 1
Query:    1 SKADCTKHLDAGAKKVLLTVPPKDEIDNMIVLGVNDHKLKATDRIISNASCTTNCLGPIAKVLHENFGIVGGLMTTVHAYTNDQRILDLPHSDLRRARAAAANIIPTSTGAARAVGKVLPQLAGKLDGCAMRVPVPDGSVVDLVATTKKKVTVEAVNAAMKAAAKKDMKGILEYTEDPLVSSDIVGNPYSSIFDALSTMVMGSNMVKVVSWYDNEWGYSNRVVELMKKAHGL 696
            S+  C KH+DAGA KVLLTVPPKDEIDNMIVLG ND  L+  DRIISNASCTTNCL P+AKVLHENFGIV GLMTTVHAYTNDQRILDLPHSDLRRAR+AA NIIPTSTGAARAVGKVLP+L GKLDGCAMRVPVPDGSVVDLVA  +K+VT E +NAAMK AA+  MKGIL Y+EDPLVSSDIVG+P+S++FD  +TM  G N+VKV+ WYDNEWGYSNRVV+L+ KAH L
Sbjct:  102 SREACQKHIDAGAAKVLLTVPPKDEIDNMIVLGANDEALRPEDRIISNASCTTNCLAPMAKVLHENFGIVSGLMTTVHAYTNDQRILDLPHSDLRRARSAAQNIIPTSTGAARAVGKVLPKLNGKLDGCAMRVPVPDGSVVDLVAVLEKEVTAEEINAAMKEAAEGPMKGILFYSEDPLVSSDIVGDPHSNVFDGQATMASG-NIVKVIGWYDNEWGYSNRVVDLVAKAHAL 332          
BLAST of mRNA_M-pyrifera_M_contig90191.20906.1 vs. uniprot
Match: A0A518CZY8_9BACT (Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Planctomycetes bacterium Pla163 TaxID=2528008 RepID=A0A518CZY8_9BACT)

HSP 1 Score: 361 bits (926), Expect = 3.410e-122
Identity = 189/236 (80.08%), Postives = 203/236 (86.02%), Query Frame = 1
Query:    1 SKADCTKHLDAGAKKVLLTVPPKDEIDNMIVLGVNDHKLKATDRIISNASCTTNCLGPIAKVLHENFGIVGGLMTTVHAYTNDQRILDLPHSDLRRARAAAANIIPTSTGAARAVGKVLPQLAGKLDGCAMRVPVPDGSVVDLVATTKKKVTVEAVNAAMKAAAK-KDMKGILEYTEDPLVSSDIVGNPYSSIFDALSTMVMGSNMVKVVSWYDNEWGYSNRVVELMKKAHGLKAK 705
            S+A C+KHLDAGA KV+LTVPPKDEID MIVLGVND  LKATDRIISNASCTTNCL P+ K L + FG+  GLMTTVHAYTNDQRILDLPHSDLRRARAAA NIIPT+TGAARAVGKVLP L GKLDG AMRVPVP GSVVDLVA   K  TVE+VNAA+KAAAK K +KGILEY+E PLVSSDIVGNP+SSIFDA STM MG   VKVVSWYDNEWGYSNRV +L+K AH LKAK
Sbjct:  102 SRAACSKHLDAGAGKVILTVPPKDEIDAMIVLGVNDSSLKATDRIISNASCTTNCLAPLVKALDDAFGVESGLMTTVHAYTNDQRILDLPHSDLRRARAAAENIIPTTTGAARAVGKVLPHLQGKLDGMAMRVPVPVGSVVDLVANLGKDATVESVNAAIKAAAKTKGLKGILEYSELPLVSSDIVGNPHSSIFDAQSTMTMGKRQVKVVSWYDNEWGYSNRVCDLIKLAHSLKAK 337          
BLAST of mRNA_M-pyrifera_M_contig90191.20906.1 vs. uniprot
Match: A0A2E7RKK0_9BACT (Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E7RKK0_9BACT)

HSP 1 Score: 358 bits (919), Expect = 1.540e-121
Identity = 184/228 (80.70%), Postives = 199/228 (87.28%), Query Frame = 1
Query:   13 CTKHLDAGAKKVLLTVPPKDEIDNMIVLGVNDHKLKATDRIISNASCTTNCLGPIAKVLHENFGIVGGLMTTVHAYTNDQRILDLPHSDLRRARAAAANIIPTSTGAARAVGKVLPQLAGKLDGCAMRVPVPDGSVVDLVATTKKKVTVEAVNAAMKAAAKKDMKGILEYTEDPLVSSDIVGNPYSSIFDALSTMVMGSNMVKVVSWYDNEWGYSNRVVELMKKAHGL 696
            C KH+DAGAKKVLLTVPPKD IDNMIVLGVND  LKA D IISNASCTTNCL PIAK LH  FGI  GLMTT HAYTNDQRILDLPHSDLRRARAAA NIIPTSTGAARAVGKVLP+L GKLDG +MRVPVP+GSVVDLVA   K+VTV+ VNAA+KA A+ +MKG+LEY+EDPLVSSDI+ NP+SSIFDA STMVM SNMVKVVSWYDNEWGYSNRV +L  K+H L
Sbjct:  107 CQKHIDAGAKKVLLTVPPKDAIDNMIVLGVNDEDLKAEDCIISNASCTTNCLAPIAKALHGAFGIRRGLMTTTHAYTNDQRILDLPHSDLRRARAAAQNIIPTSTGAARAVGKVLPELNGKLDGMSMRVPVPNGSVVDLVAVLDKEVTVDGVNAAIKACAEGEMKGVLEYSEDPLVSSDILQNPHSSIFDAKSTMVMDSNMVKVVSWYDNEWGYSNRVCDLAFKSHNL 334          
BLAST of mRNA_M-pyrifera_M_contig90191.20906.1 vs. uniprot
Match: A0A523PPK1_9BACT (Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PPK1_9BACT)

HSP 1 Score: 356 bits (913), Expect = 1.700e-120
Identity = 177/236 (75.00%), Postives = 204/236 (86.44%), Query Frame = 1
Query:    1 SKADCTKHLDAGAKKVLLTVPPKDEIDNMIVLGVNDHKLKATDRIISNASCTTNCLGPIAKVLHENFGIVGGLMTTVHAYTNDQRILDLPHSDLRRARAAAANIIPTSTGAARAVGKVLPQLAGKLDGCAMRVPVPDGSVVDLVATTKKKVTVEAVNAAMKAAAKKDMKGILEYTEDPLVSSDIVGNPYSSIFDALSTMVMGSNMVKVVSWYDNEWGYSNRVVELMKKAHGLKAKA 708
            ++A C KH+DAGAK+VLLTVPPKD ID MIV+GVND  L+A+ RIISNASCTTNCL P+ KVL + FGI  GLMTTVHAYTNDQR+LD PH DLRRARAAA NIIPT+TGAARAVG+VLP+LAGKLDGCAMRVPVPDGSVVDLVA+ + K TVE++NAA K AA+  +KGILEYTEDP+VSSD++GNP+SS+FDA  TMV+  NMVK+VSWYDNEWGYSNRVV+LM  AH LK  A
Sbjct:  100 TRAACQKHIDAGAKRVLLTVPPKDAIDAMIVMGVNDKSLRASHRIISNASCTTNCLAPLVKVLDDAFGIRHGLMTTVHAYTNDQRMLDFPHKDLRRARAAAVNIIPTTTGAARAVGQVLPKLAGKLDGCAMRVPVPDGSVVDLVASVRTKATVESLNAAFKRAAQGPLKGILEYTEDPIVSSDVIGNPHSSVFDAKCTMVIAGNMVKLVSWYDNEWGYSNRVVDLMIAAHKLKGGA 335          
BLAST of mRNA_M-pyrifera_M_contig90191.20906.1 vs. uniprot
Match: A0A7C8D0Q7_9BACT (Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C8D0Q7_9BACT)

HSP 1 Score: 354 bits (909), Expect = 8.140e-120
Identity = 180/237 (75.95%), Postives = 205/237 (86.50%), Query Frame = 1
Query:    4 KADCTKHLDAGAKKVLLTVPPKDEIDNMIVLGVNDHKLKATDRIISNASCTTNCLGPIAKVLHENFGIVGGLMTTVHAYTNDQRILDLPHSDLRRARAAAANIIPTSTGAARAVGKVLPQLAGKLDGCAMRVPVPDGSVVDLVATTKKKVTVEAVNAAMKAAAKK-DMKGILEYTEDPLVSSDIVGNPYSSIFDALSTMVMGSNMVKVVSWYDNEWGYSNRVVELMKKAHGLKAKAK 711
            +  C  HL+AGAKKVLLTVPPKD ID MIV+GVN   LKA+DRIISNASCTTNCL P+ KVL + FG+  GLMTT+H YTNDQRILDLPHSDLRRARAAA NIIPT+TGAARAVG++LP+LAGKLDG A+RVPVPDGS+VDLVA  KKKVTVE+VNAA KAAAK  D+KGILEY EDPLVS+DI+GNP+SSIFD  STMVM  NM+KV+SWYDNEWGYS+RVV+LM+ +H LK  AK
Sbjct:  101 REQCALHLEAGAKKVLLTVPPKDAIDAMIVMGVNQKTLKASDRIISNASCTTNCLAPVVKVLDDKFGLQHGLMTTIHGYTNDQRILDLPHSDLRRARAAALNIIPTTTGAARAVGQILPRLAGKLDGGAVRVPVPDGSMVDLVARLKKKVTVESVNAAFKAAAKSGDLKGILEYNEDPLVSTDIIGNPHSSIFDVGSTMVMEGNMIKVISWYDNEWGYSSRVVDLMRFSHRLKGGAK 337          
BLAST of mRNA_M-pyrifera_M_contig90191.20906.1 vs. uniprot
Match: A0A7C5PY34_9BACT (Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C5PY34_9BACT)

HSP 1 Score: 353 bits (907), Expect = 1.020e-119
Identity = 179/231 (77.49%), Postives = 202/231 (87.45%), Query Frame = 1
Query:    4 KADCTKHLDAGAKKVLLTVPPKDEIDNMIVLGVNDHKLKATDRIISNASCTTNCLGPIAKVLHENFGIVGGLMTTVHAYTNDQRILDLPHSDLRRARAAAANIIPTSTGAARAVGKVLPQLAGKLDGCAMRVPVPDGSVVDLVATTKKKVTVEAVNAAMKAAAKKDMKGILEYTEDPLVSSDIVGNPYSSIFDALSTMVMGSNMVKVVSWYDNEWGYSNRVVELMKKAHGL 696
            +  C KHL+AGA KVLLTVPPK EIDNMIVLGVND  LKA+D+IISNASCTTNCL P+AKVLH++FGIV GL+TTVHAYTNDQRI D+ HSDLRRARA AANIIPTSTGAARAVGKVLP+L GKLDG AMRVPVPDGSVVDLVA   + VTVE VNAA+KAAA++ MKGIL Y  DP+VSSDI+ +P+SSI D+LSTMV G N+VK VSWYDNEWGYSNRVV+L++KAH L
Sbjct:  103 RESCAKHLEAGAPKVLLTVPPKGEIDNMIVLGVNDDALKASDKIISNASCTTNCLAPLAKVLHDSFGIVKGLVTTVHAYTNDQRIADMIHSDLRRARAGAANIIPTSTGAARAVGKVLPELDGKLDGMAMRVPVPDGSVVDLVAELSRNVTVEEVNAALKAAAQEPMKGILAYQVDPIVSSDIIHDPHSSIVDSLSTMVTGGNLVKCVSWYDNEWGYSNRVVDLIQKAHEL 333          
BLAST of mRNA_M-pyrifera_M_contig90191.20906.1 vs. uniprot
Match: A0A2A5DA16_9BACT (Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2A5DA16_9BACT)

HSP 1 Score: 353 bits (906), Expect = 1.450e-119
Identity = 177/232 (76.29%), Postives = 200/232 (86.21%), Query Frame = 1
Query:    4 KADCTKHLDAGAKKVLLTVPPKDEIDNMIVLGVNDHKLKATDRIISNASCTTNCLGPIAKVLHENFGIVGGLMTTVHAYTNDQRILDLPHSDLRRARAAAANIIPTSTGAARAVGKVLPQLAGKLDGCAMRVPVPDGSVVDLVATTKKK-VTVEAVNAAMKAAAKKDMKGILEYTEDPLVSSDIVGNPYSSIFDALSTMVMGSNMVKVVSWYDNEWGYSNRVVELMKKAHGL 696
            +A C  H+DAGAKKVLLTVPP DEIDNM+VLGVND  L A   I+SNASCTTNCL PIAKVLHE+FGI  GLM T+HAYTNDQRILDLPHSDLRRAR AA+NIIPTSTGAARAVGKVLP+L GKLDG +MRVPVP GSVVDLVA   +  VTVEA+NAAMKAAA+  MKG+LEYTEDP+VSSD++ NP+SS+FDA  TMVMG NM+K+VSWYDNEWGYSNRV +L+ KAH +
Sbjct:  104 RAQCQMHIDAGAKKVLLTVPPADEIDNMVVLGVNDETLTADQMILSNASCTTNCLAPIAKVLHESFGIKRGLMNTIHAYTNDQRILDLPHSDLRRARGAASNIIPTSTGAARAVGKVLPELEGKLDGMSMRVPVPAGSVVDLVAELDQADVTVEAINAAMKAAAEGPMKGVLEYTEDPIVSSDVIHNPHSSVFDAGQTMVMGGNMIKIVSWYDNEWGYSNRVCDLIFKAHNV 335          
BLAST of mRNA_M-pyrifera_M_contig90191.20906.1 vs. uniprot
Match: A0A2E5YLN2_9DELT (Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E5YLN2_9DELT)

HSP 1 Score: 352 bits (903), Expect = 5.420e-119
Identity = 182/227 (80.18%), Postives = 197/227 (86.78%), Query Frame = 1
Query:   13 CTKHLDAGAKKVLLTVPPKDEIDNMIVLGVNDHKLKATDRIISNASCTTNCLGPIAKVLHENFGIVGGLMTTVHAYTNDQRILDLPHSDLRRARAAAANIIPTSTGAARAVGKVLPQLAGKLDGCAMRVPVPDGSVVDLVATTKKKVTVEAVNAAMK-AAAKKDMKGILEYTEDPLVSSDIVGNPYSSIFDALSTMVMGSNMVKVVSWYDNEWGYSNRVVELMKKAH 690
            C KH+ AGA +V LTVPPKDEID M+V+GVN   LK  DRIISNASCTTNCL P+AKVL +NFG+  G+MTT+HAYTNDQRILDLPHSDLRRARAAAANIIPTSTGAARAVGKVLP+LAGKLDG AMRVPVPDGSV DLVAT KKKVTVE VNAA K AAA KDMKG L Y+EDPLVSSDIVG+P SSIFD+ +TMVM  N VKVVSWYDNEWGYSNRVV+LM  AH
Sbjct:  106 CMKHIQAGASRVFLTVPPKDEIDAMVVMGVNHKTLKKRDRIISNASCTTNCLAPLAKVLDDNFGLKHGMMTTIHAYTNDQRILDLPHSDLRRARAAAANIIPTSTGAARAVGKVLPKLAGKLDGMAMRVPVPDGSVTDLVATLKKKVTVEEVNAAFKKAAASKDMKGFLVYSEDPLVSSDIVGDPGSSIFDSGATMVMQGNSVKVVSWYDNEWGYSNRVVDLMGYAH 332          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90191.20906.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C1WUT4_9BACT4.830e-13583.47Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=P... [more]
A0A2E5X674_9BACT3.720e-12877.29Glyceraldehyde-3-phosphate dehydrogenase n=2 Tax=P... [more]
A0A7V7MIK4_9BACT1.740e-12378.88Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=P... [more]
A0A518CZY8_9BACT3.410e-12280.08Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=P... [more]
A0A2E7RKK0_9BACT1.540e-12180.70Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=P... [more]
A0A523PPK1_9BACT1.700e-12075.00Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=P... [more]
A0A7C8D0Q7_9BACT8.140e-12075.95Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=P... [more]
A0A7C5PY34_9BACT1.020e-11977.49Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=P... [more]
A0A2A5DA16_9BACT1.450e-11976.29Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=P... [more]
A0A2E5YLN2_9DELT5.420e-11980.18Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=D... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90191contigM-pyrifera_M_contig90191:38..793 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score341.3
Seed ortholog evalue3.9e-91
Seed eggNOG ortholog880073.Calab_3781
Preferred namegap
KEGG rclassRC00149
KEGG koko:K00134
KEGG ReactionR01061
KEGG Pathwayko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010
KEGG ModuleM00001,M00002,M00003,M00165,M00166,M00308,M00552
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363
EggNOG free text desc.Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
EggNOG OGs2NNPP@2323,COG0057@1,COG0057@2
EC1.2.1.12
COG Functional cat.G
Best tax levelunclassified Bacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131,ko04147
Exons1
Model size756
Cds size756
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816813.1802535-CDS-M-pyrifera_M_contig90191:37..7931622816813.1802535-CDS-M-pyrifera_M_contig90191:37..793Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90191 38..793 -
1692278193.4914136-CDS-M-pyrifera_M_contig90191:37..7931692278193.4914136-CDS-M-pyrifera_M_contig90191:37..793Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90191 38..793 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90191.20906.1prot_M-pyrifera_M_contig90191.20906.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90191 38..793 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90191.20906.1

>prot_M-pyrifera_M_contig90191.20906.1 ID=prot_M-pyrifera_M_contig90191.20906.1|Name=mRNA_M-pyrifera_M_contig90191.20906.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=252bp
SKADCTKHLDAGAKKVLLTVPPKDEIDNMIVLGVNDHKLKATDRIISNAS
CTTNCLGPIAKVLHENFGIVGGLMTTVHAYTNDQRILDLPHSDLRRARAA
AANIIPTSTGAARAVGKVLPQLAGKLDGCAMRVPVPDGSVVDLVATTKKK
VTVEAVNAAMKAAAKKDMKGILEYTEDPLVSSDIVGNPYSSIFDALSTMV
MGSNMVKVVSWYDNEWGYSNRVVELMKKAHGLKAKAKKTKKKTGRKLAKR
A*
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mRNA from alignment at M-pyrifera_M_contig90191:38..793-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90191.20906.1 ID=mRNA_M-pyrifera_M_contig90191.20906.1|Name=mRNA_M-pyrifera_M_contig90191.20906.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=756bp|location=Sequence derived from alignment at M-pyrifera_M_contig90191:38..793- (Macrocystis pyrifera P11B4 male)
TCCAAGGCGGACTGCACCAAGCACCTCGACGCGGGCGCCAAGAAGGTGCT CTTGACCGTGCCGCCCAAGGACGAGATCGACAACATGATCGTCCTCGGCG TCAACGACCACAAGCTCAAGGCGACCGACCGGATCATCTCCAACGCGTCG TGCACGACGAACTGCCTGGGCCCGATCGCCAAGGTGCTGCACGAGAACTT CGGCATCGTCGGCGGCCTGATGACCACCGTCCACGCCTACACGAACGACC AGCGCATCCTCGACCTGCCGCACTCCGACCTGCGGCGGGCGCGCGCCGCG GCCGCGAACATCATCCCGACCTCGACCGGCGCCGCGCGCGCGGTCGGCAA GGTCCTGCCGCAGCTCGCCGGCAAGCTCGACGGCTGCGCGATGCGCGTGC CCGTCCCGGACGGCTCGGTCGTCGACCTCGTCGCCACGACGAAGAAGAAG GTCACCGTCGAAGCGGTCAACGCCGCGATGAAGGCAGCCGCCAAGAAGGA CATGAAGGGCATCCTCGAGTACACCGAGGACCCGCTGGTCTCGAGCGACA TCGTGGGCAACCCCTACAGCTCGATCTTCGATGCGCTCTCGACGATGGTC ATGGGCTCGAACATGGTCAAGGTCGTCAGCTGGTACGACAACGAGTGGGG CTACTCCAACCGCGTCGTCGAGCTGATGAAGAAGGCCCACGGTCTCAAGG CCAAGGCCAAGAAGACCAAGAAGAAGACCGGTCGCAAGCTCGCCAAGCGC GCCTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig90191:38..793-

>mRNA_M-pyrifera_M_contig90191.20906.1 ID=mRNA_M-pyrifera_M_contig90191.20906.1|Name=mRNA_M-pyrifera_M_contig90191.20906.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1512bp|location=Sequence derived from alignment at M-pyrifera_M_contig90191:38..793- (Macrocystis pyrifera P11B4 male)
TCCAAGGCGGACTGCACCAAGCACCTCGACGCGGGCGCCAAGAAGGTGCT
CTTGACCGTGCCGCCCAAGGACGAGATCGACAACATGATCGTCCTCGGCG
TCAACGACCACAAGCTCAAGGCGACCGACCGGATCATCTCCAACGCGTCG
TGCACGACGAACTGCCTGGGCCCGATCGCCAAGGTGCTGCACGAGAACTT
CGGCATCGTCGGCGGCCTGATGACCACCGTCCACGCCTACACGAACGACC
AGCGCATCCTCGACCTGCCGCACTCCGACCTGCGGCGGGCGCGCGCCGCG
GCCGCGAACATCATCCCGACCTCGACCGGCGCCGCGCGCGCGGTCGGCAA
GGTCCTGCCGCAGCTCGCCGGCAAGCTCGACGGCTGCGCGATGCGCGTGC
CCGTCCCGGACGGCTCGGTCGTCGACCTCGTCGCCACGACGAAGAAGAAG
GTCACCGTCGAAGCGGTCAACGCCGCGATGAAGGCAGCCGCCAAGAAGGA
CATGAAGGGCATCCTCGAGTACACCGAGGACCCGCTGGTCTCGAGCGACA
TCGTGGGCAACCCCTACAGCTCGATCTTCGATGCGCTCTCGACGATGGTC
ATGGGCTCGAACATGGTCAAGGTCGTCAGCTGGTACGACAACGAGTGGGG
CTACTCCAACCGCGTCGTCGAGCTGATGAAGAAGGCCCACGGTCTCAAGG
CCAAGGCCAAGAAGACCAAGAAGAAGACCGGTCGCAAGCTCGCCAAGCGC
GCCTAGTCCAAGGCGGACTGCACCAAGCACCTCGACGCGGGCGCCAAGAA
GGTGCTCTTGACCGTGCCGCCCAAGGACGAGATCGACAACATGATCGTCC
TCGGCGTCAACGACCACAAGCTCAAGGCGACCGACCGGATCATCTCCAAC
GCGTCGTGCACGACGAACTGCCTGGGCCCGATCGCCAAGGTGCTGCACGA
GAACTTCGGCATCGTCGGCGGCCTGATGACCACCGTCCACGCCTACACGA
ACGACCAGCGCATCCTCGACCTGCCGCACTCCGACCTGCGGCGGGCGCGC
GCCGCGGCCGCGAACATCATCCCGACCTCGACCGGCGCCGCGCGCGCGGT
CGGCAAGGTCCTGCCGCAGCTCGCCGGCAAGCTCGACGGCTGCGCGATGC
GCGTGCCCGTCCCGGACGGCTCGGTCGTCGACCTCGTCGCCACGACGAAG
AAGAAGGTCACCGTCGAAGCGGTCAACGCCGCGATGAAGGCAGCCGCCAA
GAAGGACATGAAGGGCATCCTCGAGTACACCGAGGACCCGCTGGTCTCGA
GCGACATCGTGGGCAACCCCTACAGCTCGATCTTCGATGCGCTCTCGACG
ATGGTCATGGGCTCGAACATGGTCAAGGTCGTCAGCTGGTACGACAACGA
GTGGGGCTACTCCAACCGCGTCGTCGAGCTGATGAAGAAGGCCCACGGTC
TCAAGGCCAAGGCCAAGAAGACCAAGAAGAAGACCGGTCGCAAGCTCGCC
AAGCGCGCCTAG
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