mRNA_M-pyrifera_M_contig90175.20898.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig90175.20898.1 vs. uniprot
Match: A0A7Y3A8U6_9ACTN (AMP-binding protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y3A8U6_9ACTN) HSP 1 Score: 276 bits (706), Expect = 7.300e-87 Identity = 157/264 (59.47%), Postives = 175/264 (66.29%), Query Frame = 1 Query: 1 SDPASSVSELAHHRTRTRPVIGVYGTDRADVYRKAAATGPHAESGPIVGVDESQFPAAAAGSLIAAQTKAQMTPKPGARDESTRWPVPELRDRLAVMFTSGTTGDPKGVEITQANYAFTGMVMAEAAGLAADDRQLVVLPLFHANAQYYSFASAIWAGASVGLVHRFSASGFVPSARRLEATHASLFAAPIRMILAKTADGETLSLRHCWFAQNLSTEHYDRFATLAGCRPRQLYGMTETIPAVLTDRSEHPRPDVMGTPTPPC 792 SDP ELA H RT+PVIG +RAD+YR AA PIV +DES A L+ PG E W P L DR AVMFTSGTTG PKGVEITQANYAF G MAEAA L A DR +VVLPLFHANAQYYSFASAIWAGASV L+H FSAS F+P R AT ASLFAAPIRMILA+ + E +SLR+CWFAQN++ + +D + GCRPRQLYGMTETIPAVLTD + PRPD MG T C Sbjct: 93 SDPMGRTPELADHIERTQPVIGFCSVERADIYRAAAPAAM-----PIVEIDESDVSLA----LL-----------PGT--EFADWASPALTDRAAVMFTSGTTGRPKGVEITQANYAFAGKAMAEAAALTAGDRHIVVLPLFHANAQYYSFASAIWAGASVALMHTFSASSFLPQCARHRATCASLFAAPIRMILARGSKTEGVSLRNCWFAQNIAADQHDTISDWLGCRPRQLYGMTETIPAVLTDEAADPRPDSMGRVTGGC 334
BLAST of mRNA_M-pyrifera_M_contig90175.20898.1 vs. uniprot
Match: A0A6G2KPL8_9ACTN (ATP-dependent acyl-CoA ligase n=5 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6G2KPL8_9ACTN) HSP 1 Score: 276 bits (705), Expect = 1.060e-86 Identity = 155/264 (58.71%), Postives = 177/264 (67.05%), Query Frame = 1 Query: 1 SDPASSVSELAHHRTRTRPVIGVYGTDRADVYRKAAATGPHAESGPIVGVDESQFPAAAAGSLIAAQTKAQMTPKPGARDESTRWPVPELRDRLAVMFTSGTTGDPKGVEITQANYAFTGMVMAEAAGLAADDRQLVVLPLFHANAQYYSFASAIWAGASVGLVHRFSASGFVPSARRLEATHASLFAAPIRMILAKTADGETLSLRHCWFAQNLSTEHYDRFATLAGCRPRQLYGMTETIPAVLTDRSEHPRPDVMGTPTPPC 792 SDP ELA H RTRP G T RADVYR+AAA P I +DE A GSL A A++ WP ++RDR AVMFTSGTTG PKGVEITQANYAF G VMAE A LA +DRQLVVLPLFHANAQYYSFASAIW GASV L+ FSASGF+ A R AT ASLFAAP+RMILA+ A + + LRHCW+AQN++ + Y+ GCRPRQLYGMTETIPAVLT+ +++P P MG TP C Sbjct: 90 SDPMGKAPELADHIERTRPKAGFCATSRADVYRQAAAVSPDLA---ITELDE------AGGSLDALMGNARVD-----------WPAADIRDRAAVMFTSGTTGRPKGVEITQANYAFCGQVMAERADLAPEDRQLVVLPLFHANAQYYSFASAIWTGASVALMPAFSASGFLAQAARHRATCASLFAAPMRMILARGAPVDGVGLRHCWYAQNIADDQYETLTAWLGCRPRQLYGMTETIPAVLTEPADNPVPSSMGQVTPGC 333
BLAST of mRNA_M-pyrifera_M_contig90175.20898.1 vs. uniprot
Match: A0A7K2CTB9_9ACTN (ATP-dependent acyl-CoA ligase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7K2CTB9_9ACTN) HSP 1 Score: 272 bits (695), Expect = 2.170e-85 Identity = 154/264 (58.33%), Postives = 179/264 (67.80%), Query Frame = 1 Query: 1 SDPASSVSELAHHRTRTRPVIGVYGTDRADVYRKAAATGPHAESGPIVGVDESQFPAAAAGSLIAAQTKAQMTPKPGARDESTRWPVPELRDRLAVMFTSGTTGDPKGVEITQANYAFTGMVMAEAAGLAADDRQLVVLPLFHANAQYYSFASAIWAGASVGLVHRFSASGFVPSARRLEATHASLFAAPIRMILAKTADGETLSLRHCWFAQNLSTEHYDRFATLAGCRPRQLYGMTETIPAVLTDRSEHPRPDVMGTPTPPC 792 SDP V ELA H RTRP G TDRA+VYR+AA P+ I +DE A+GSL A A++ WP L DR AVMFTSGTTG PKGVE+TQANYAF G VMAE A LA +DRQLVVLPLFHANAQYYSFASAIW GASV L+ FSASGF+ R +AT ASLFAAP+RMILA+ A + LRHCW+AQN++ E Y+ A+ GCRPRQLYGMTET+PAVLT+ +++P P MG TP C Sbjct: 90 SDPMGKVPELADHIERTRPKAGFCATDRAEVYRQAAEMSPNLA---ITELDE------ASGSLEALVGSARVD-----------WPDVNLWDRAAVMFTSGTTGRPKGVEVTQANYAFCGQVMAERADLAPNDRQLVVLPLFHANAQYYSFASAIWTGASVALMPTFSASGFLAQVARHQATCASLFAAPLRMILARGAPVHGVGLRHCWYAQNIADEQYETLASWFGCRPRQLYGMTETVPAVLTEPTDNPVPSSMGQVTPGC 333
BLAST of mRNA_M-pyrifera_M_contig90175.20898.1 vs. uniprot
Match: A0A4R7I428_9ACTN (Crotonobetaine/carnitine-CoA ligase n=1 Tax=Ilumatobacter fluminis TaxID=467091 RepID=A0A4R7I428_9ACTN) HSP 1 Score: 272 bits (695), Expect = 5.650e-85 Identity = 154/269 (57.25%), Postives = 171/269 (63.57%), Query Frame = 1 Query: 1 SDPASSVSELAHHRTRTRPVIGVYGTDRADVYRKAAATGPHAESGPIVGVDESQFPAAAAGSLIAAQTKAQMTPKPGARDESTRWPVPELRDRLAVMFTSGTTGDPKGVEITQANYAFTGMVMAEAAGLAADDRQLVVLPLFHANAQYYSFASAIWAGASVGLVHRFSASGFVPSARRLEATHASLFAAPIRMILAK-----TADGETLSLRHCWFAQNLSTEHYDRFATLAGCRPRQLYGMTETIPAVLTDRSEHPRPDVMGTPTPPC 792 SDP E A H RT P +GV RAD Y AA P++ +DE A + P G + WP + DR AVMFTSGTTG PKGVEITQANYAF G MA AA L ADDRQ+VVLPLFHANAQYYSFASAI GASV L+H FSASGF+P A R ATHASLFA PIRMILA+ +DGE L LRHCWFAQNL + ++ F GCRPRQLYGMTETIPAVLTD ++ PRPD MGT T C Sbjct: 92 SDPMGRTPEFAEHIDRTSPAVGVCAASRADTYLPAAG------GRPVIQIDE-------------ADASFEWLPADGVGE----WPDVQATDRAAVMFTSGTTGRPKGVEITQANYAFAGTTMASAADLGADDRQIVVLPLFHANAQYYSFASAIAVGASVALMHTFSASGFIPQAARHRATHASLFAGPIRMILARGGPLDPSDGE-LQLRHCWFAQNLGDDQFETFGEWIGCRPRQLYGMTETIPAVLTDTTDDPRPDSMGTVTDGC 336
BLAST of mRNA_M-pyrifera_M_contig90175.20898.1 vs. uniprot
Match: A0A848UB97_9ACTN (AMP-binding protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A848UB97_9ACTN) HSP 1 Score: 270 bits (689), Expect = 4.240e-84 Identity = 155/264 (58.71%), Postives = 172/264 (65.15%), Query Frame = 1 Query: 1 SDPASSVSELAHHRTRTRPVIGVYGTDRADVYRKAAATGPHAESGPIVGVDESQFPAAAAGSLIAAQTKAQMTPKPGARDESTRWPVPELRDRLAVMFTSGTTGDPKGVEITQANYAFTGMVMAEAAGLAADDRQLVVLPLFHANAQYYSFASAIWAGASVGLVHRFSASGFVPSARRLEATHASLFAAPIRMILAKTADGETLSLRHCWFAQNLSTEHYDRFATLAGCRPRQLYGMTETIPAVLTDRSEHPRPDVMGTPTPPC 792 SDP ELA H RT P +G DR++VYR AA G P+ +DE A P D WP P L DR AVMFTSGTTG PKGVEITQANYAF G VMAEAA LA DDRQLVVLPLFHANAQYYSF SAIWAGASV L+H FSASGF+ ARR AT ASLFAAP+RMILA+ ++LRHCWFAQN++T+ +D + GCRPRQLYGMTETIPAVLTD S P P MG+ T C Sbjct: 93 SDPMGRTPELADHVERTDPTVGFCARDRSEVYR--AAIGGR----PVFEIDE-------------ADAALAWLPDVAFTD----WPEPGLHDRAAVMFTSGTTGRPKGVEITQANYAFAGKVMAEAASLAPDDRQLVVLPLFHANAQYYSFCSAIWAGASVALMHTFSASGFLDQARRHAATCASLFAAPMRMILARGGPVGGVALRHCWFAQNVTTDQFDTLSEWFGCRPRQLYGMTETIPAVLTDTSADPDPASMGSVTAGC 333
BLAST of mRNA_M-pyrifera_M_contig90175.20898.1 vs. uniprot
Match: A0A2E4MRQ0_9BACT (Acyl-CoA synthetase n=2 Tax=Bacteria TaxID=2 RepID=A0A2E4MRQ0_9BACT) HSP 1 Score: 268 bits (684), Expect = 1.520e-83 Identity = 151/265 (56.98%), Postives = 176/265 (66.42%), Query Frame = 1 Query: 1 SDPASSVSELAHHRTRTRPVIGVYGTDRADVYRKAAA-TGPHAESGPIVGVDESQFPAAAAGSLIAAQTKAQMTPKPGARDESTRWPVPELRDRLAVMFTSGTTGDPKGVEITQANYAFTGMVMAEAAGLAADDRQLVVLPLFHANAQYYSFASAIWAGASVGLVHRFSASGFVPSARRLEATHASLFAAPIRMILAKTADGETLSLRHCWFAQNLSTEHYDRFATLAGCRPRQLYGMTETIPAVLTDRSEHPRPDVMGTPTPPC 792 SDP + ELA H RTRP +G+ DRADVYR A G AE ++ VDE+ A P GA T W P L DR AVMFTSGTTG PKGVEITQANYAF G VMAEA+ L +DRQ+VVLPLFHANAQYYSFA AIW+GASV L+H FSAS F+P R AT ASLFAAPIRMILA+ + + + LRHCW+AQN++ E Y++ + GCR RQLYGMTETIPAVLT+ + PR D MG+ T C Sbjct: 93 SDPMARRPELADHLERTRPSVGLCAVDRADVYRSALVDAGVSAE---VIEVDEAD---------------ASSLPSSGA--SYTDWVTPALSDRAAVMFTSGTTGRPKGVEITQANYAFAGKVMAEASELTVEDRQIVVLPLFHANAQYYSFAPAIWSGASVALMHTFSASNFLPQCARHSATAASLFAAPIRMILARGEEVDGVRLRHCWYAQNVTVEQYEQLSRWLGCRARQLYGMTETIPAVLTEAVDKPRHDSMGSVTEGC 337
BLAST of mRNA_M-pyrifera_M_contig90175.20898.1 vs. uniprot
Match: A0A2E8DDS2_9ACTN (Acyl-CoA synthetase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8DDS2_9ACTN) HSP 1 Score: 264 bits (675), Expect = 3.570e-82 Identity = 149/265 (56.23%), Postives = 168/265 (63.40%), Query Frame = 1 Query: 1 SDPASSVSELAHHRTRTRPVIGVYGTDRADVYRKAAATGPHAESGPIVGVDESQFPAAAAGSLIAAQTKAQMTPKPGAR-DESTRWPVPELRDRLAVMFTSGTTGDPKGVEITQANYAFTGMVMAEAAGLAADDRQLVVLPLFHANAQYYSFASAIWAGASVGLVHRFSASGFVPSARRLEATHASLFAAPIRMILAKTADGETLSLRHCWFAQNLSTEHYDRFATLAGCRPRQLYGMTETIPAVLTDRSEHPRPDVMGTPTPPC 792 SDP SV+EL H RT PV+GV + R+DVY++A G + A Q Q P D T W P DR AVMFTSGTTGDPKGVE+TQANYAF G MA AAGL DRQLVVLP+FH NAQYYSFASAIW GASV L+ FSASGF+P A R AT ASLFAAP+RMILA+ A E L LRHCW+AQN++ + Y + GCRPRQLYGMTETIPAVLTD +E P P MG T C Sbjct: 93 SDPLGSVAELEGHIRRTGPVVGVCASQRSDVYQQAC------------------------GGIQAVQVDEQDPGLPSLLGDPFTSWSQPGPTDRAAVMFTSGTTGDPKGVEVTQANYAFAGRTMALAAGLDETDRQLVVLPMFHVNAQYYSFASAIWVGASVALMPSFSASGFLPQAARYGATAASLFAAPLRMILARGASVEGLRLRHCWYAQNITADQYSMVSEWFGCRPRQLYGMTETIPAVLTDETEDPEPSSMGRVTAGC 333
BLAST of mRNA_M-pyrifera_M_contig90175.20898.1 vs. uniprot
Match: A0A6B1E9G1_9ACTN (ATP-dependent acyl-CoA ligase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1E9G1_9ACTN) HSP 1 Score: 263 bits (673), Expect = 5.770e-82 Identity = 151/264 (57.20%), Postives = 169/264 (64.02%), Query Frame = 1 Query: 1 SDPASSVSELAHHRTRTRPVIGVYGTDRADVYRKAAATGPHAESGPIVGVDESQFPAAAAGSLIAAQTKAQMTPKPGARDESTRWPVPELRDRLAVMFTSGTTGDPKGVEITQANYAFTGMVMAEAAGLAADDRQLVVLPLFHANAQYYSFASAIWAGASVGLVHRFSASGFVPSARRLEATHASLFAAPIRMILAKTADGETLSLRHCWFAQNLSTEHYDRFATLAGCRPRQLYGMTETIPAVLTDRSEHPRPDVMGTPTPPC 792 SDP ELA H RT P +G+ RA YR A + P++ +DE+ A AA A P PG LRDR AVMFTSGTTG PKGVE+TQANYAF G VMA+AAGL DDRQLVVLPLFHANAQYYSFASAIWAGASV L+ FSASGF+P+A R AT ASLFAAPIRMILA+ LRHCW+AQN+S + Y A GCRPRQLYGMTETIPAVLTD + P MG +P C Sbjct: 76 SDPMGRAPELAGHIERTGPAVGLCAGARAGTYRAAVDEAGRPDL-PVIEIDEADTALAL---FDAAPLAASQRPAPG------------LRDRAAVMFTSGTTGRPKGVEVTQANYAFAGKVMADAAGLTGDDRQLVVLPLFHANAQYYSFASAIWAGASVALMPAFSASGFLPAAARHSATCASLFAAPIRMILARGRPAAGARLRHCWYAQNISADQYSTVAQWFGCRPRQLYGMTETIPAVLTDEAADPHHASMGRVSPGC 323
BLAST of mRNA_M-pyrifera_M_contig90175.20898.1 vs. uniprot
Match: A0A381ZKG9_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381ZKG9_9ZZZZ) HSP 1 Score: 261 bits (666), Expect = 4.690e-81 Identity = 147/264 (55.68%), Postives = 167/264 (63.26%), Query Frame = 1 Query: 1 SDPASSVSELAHHRTRTRPVIGVYGTDRADVYRKAAATGPHAESGPIVGVDESQFPAAAAGSLIAAQTKAQMTPKPGARDESTRWPVPELRDRLAVMFTSGTTGDPKGVEITQANYAFTGMVMAEAAGLAADDRQLVVLPLFHANAQYYSFASAIWAGASVGLVHRFSASGFVPSARRLEATHASLFAAPIRMILAKTADGETLSLRHCWFAQNLSTEHYDRFATLAGCRPRQLYGMTETIPAVLTDRSEHPRPDVMGTPTPPC 792 SDP V ELA H RTRP++G + RA+VYRKA S +V +DES G+ D WPVP DR AVMFTSGTTG PKGVE+TQANYAFTG MAEAA L DRQLVVLPLFHANAQYYSFA A+W G SV L+ FSAS F+ A R EAT ASLFAAPIRMIL++ E L LRHCWFAQN++ + Y GC+PRQLYGMTET+PAVLTD ++ P P MG T C Sbjct: 76 SDPMGGVDELAGHIARTRPMVGFCASTRAEVYRKACG------SIGVVEIDESAVDLDVMGT-----------------DPFDAWPVPGPTDRAAVMFTSGTTGMPKGVEVTQANYAFTGQTMAEAAELGVTDRQLVVLPLFHANAQYYSFAPAVWVGGSVALMSSFSASRFLTQAARHEATAASLFAAPIRMILSRGGPVEGLQLRHCWFAQNITQDQYGTVTEWFGCQPRQLYGMTETMPAVLTDEADQPDPSSMGRITDRC 316
BLAST of mRNA_M-pyrifera_M_contig90175.20898.1 vs. uniprot
Match: A0A6B1B327_9ACTN (ATP-dependent acyl-CoA ligase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1B327_9ACTN) HSP 1 Score: 261 bits (668), Expect = 5.850e-81 Identity = 149/264 (56.44%), Postives = 168/264 (63.64%), Query Frame = 1 Query: 1 SDPASSVSELAHHRTRTRPVIGVYGTDRADVYRKAAATGPHAESGPIVGVDESQFPAAAAGSLIAAQTKAQMTPKPGARDESTRWPVPELRDRLAVMFTSGTTGDPKGVEITQANYAFTGMVMAEAAGLAADDRQLVVLPLFHANAQYYSFASAIWAGASVGLVHRFSASGFVPSARRLEATHASLFAAPIRMILAKTADGETLSLRHCWFAQNLSTEHYDRFATLAGCRPRQLYGMTETIPAVLTDRSEHPRPDVMGTPTPPC 792 +DP E A RT P +G T R+ YR A S P V + P A + +T A T +P A E T W PE D AVMFTSGTTG PKGV +TQANYAF G +MA+AA L +DRQLVVLPLFHANAQYYSFASAIW GASV L+H FSASGF+P A R +AT ASLFAAP+RMILA+ + L LRHCWFAQNL+ + Y GCRPRQLYGMTETIPAVLTD PRPD MG T C Sbjct: 93 ADPMGKEPEFAEQIERTSPTVGFCSTSRSAQYRAGVANAAAVASVPAVLAGSA--PPEAMTVIEIDETDA--TFEPFAETEFTAWATPEPTDLAAVMFTSGTTGRPKGVSVTQANYAFAGKIMAQAADLTPEDRQLVVLPLFHANAQYYSFASAIWTGASVALMHTFSASGFLPQAARHQATCASLFAAPLRMILARGGPVQGLKLRHCWFAQNLADDQYQTICDWFGCRPRQLYGMTETIPAVLTDGPGDPRPDSMGFVTAGC 352 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90175.20898.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig90175.20898.1 >prot_M-pyrifera_M_contig90175.20898.1 ID=prot_M-pyrifera_M_contig90175.20898.1|Name=mRNA_M-pyrifera_M_contig90175.20898.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=264bp SDPASSVSELAHHRTRTRPVIGVYGTDRADVYRKAAATGPHAESGPIVGVback to top mRNA from alignment at M-pyrifera_M_contig90175:3..794+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig90175.20898.1 ID=mRNA_M-pyrifera_M_contig90175.20898.1|Name=mRNA_M-pyrifera_M_contig90175.20898.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=792bp|location=Sequence derived from alignment at M-pyrifera_M_contig90175:3..794+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig90175:3..794+ >mRNA_M-pyrifera_M_contig90175.20898.1 ID=mRNA_M-pyrifera_M_contig90175.20898.1|Name=mRNA_M-pyrifera_M_contig90175.20898.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1584bp|location=Sequence derived from alignment at M-pyrifera_M_contig90175:3..794+ (Macrocystis pyrifera P11B4 male)back to top |