mRNA_M-pyrifera_M_contig90074.20882.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90074.20882.1
Unique NamemRNA_M-pyrifera_M_contig90074.20882.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig90074.20882.1 vs. uniprot
Match: A0A849MK61_9PROT (Phosphate-binding protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A849MK61_9PROT)

HSP 1 Score: 393 bits (1010), Expect = 1.500e-135
Identity = 192/247 (77.73%), Postives = 221/247 (89.47%), Query Frame = 1
Query:   19 QSLAFLYIALCAFLPVAGANDAVDPELAEYTKASGVSGNISSVGSDTLANLMTLWTEEFKRLYPNVNIQVQAAGSSTAPPALTEGTSNFGPMSRKMKGKEIEAFESRHGYKPTAIPVAIDALAVYVHKDNPIEGLTIPQVDAIFSATRTCGHPADITTWGDLGLTGEWASRPVQLYGRNSVSGTYGYFKEKALCKGDFKNSVNEQPGSASVVQGVTKSINGIGYSGIGYRTSGVRAVPLAKKAGGDF 759
            + ++ + IAL   +PV  A D VD  + +Y KASGVSGNISSVGSDTLANLMT W EEFKRLYPNVN+Q+QAAGSSTAPPAL+EGTSNFGPMSRKMK KE++AFES+ GYKPT I VAIDALAVYV+KDNPIEGL+IPQVDA+FSATR CG+  DIT+WG LGLTG+WASRPVQLYGRNSVSGTYGYFK+KALCKGD+K+SVNEQPGSASVVQG+TKS+NG+GYSGIGY+TSGV+AVPL KK GG++
Sbjct:    5 KRISAILIALSISMPVI-AEDKVDAGIPDYAKASGVSGNISSVGSDTLANLMTFWAEEFKRLYPNVNVQIQAAGSSTAPPALSEGTSNFGPMSRKMKDKEVQAFESKFGYKPTPIAVAIDALAVYVNKDNPIEGLSIPQVDAMFSATRKCGYANDITSWGQLGLTGDWASRPVQLYGRNSVSGTYGYFKKKALCKGDYKDSVNEQPGSASVVQGITKSLNGLGYSGIGYKTSGVKAVPLTKKEGGEY 250          
BLAST of mRNA_M-pyrifera_M_contig90074.20882.1 vs. uniprot
Match: A0A3D5DC48_9GAMM (Phosphate-binding protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DC48_9GAMM)

HSP 1 Score: 389 bits (999), Expect = 8.400e-134
Identity = 188/225 (83.56%), Postives = 208/225 (92.44%), Query Frame = 1
Query:   85 VDPELAEYTKASGVSGNISSVGSDTLANLMTLWTEEFKRLYPNVNIQVQAAGSSTAPPALTEGTSNFGPMSRKMKGKEIEAFESRHGYKPTAIPVAIDALAVYVHKDNPIEGLTIPQVDAIFSATRTCGHPADITTWGDLGLTGEWASRPVQLYGRNSVSGTYGYFKEKALCKGDFKNSVNEQPGSASVVQGVTKSINGIGYSGIGYRTSGVRAVPLAKKAGGDF 759
            +D +L EYTKASG+SGNISSVGSDTLANLMTLW+EEF RLYP+VNIQVQAAGSSTAPPALTEGTSN GPMSRKMK KEIE+FE RHGYKPTA+PVAIDALAVYV+KDNPI GL+IPQVDAIFSATR CG   +I  WGDLG++GEW  RP+QLYGRNSVSGTYGYFK+KALCKGD+K+SVNEQPGSASVVQGVTKSINGIGYSGIGY+TSGVR+VPL+KK+GG  
Sbjct:   30 LDDDLPEYTKASGISGNISSVGSDTLANLMTLWSEEFNRLYPSVNIQVQAAGSSTAPPALTEGTSNLGPMSRKMKDKEIESFEKRHGYKPTAVPVAIDALAVYVNKDNPISGLSIPQVDAIFSATRKCGAERNIVLWGDLGMSGEWLKRPIQLYGRNSVSGTYGYFKKKALCKGDYKDSVNEQPGSASVVQGVTKSINGIGYSGIGYQTSGVRSVPLSKKSGGKL 254          
BLAST of mRNA_M-pyrifera_M_contig90074.20882.1 vs. uniprot
Match: A0A7C1TJ21_9GAMM (Phosphate-binding protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C1TJ21_9GAMM)

HSP 1 Score: 384 bits (986), Expect = 7.180e-132
Identity = 187/225 (83.11%), Postives = 203/225 (90.22%), Query Frame = 1
Query:   85 VDPELAEYTKASGVSGNISSVGSDTLANLMTLWTEEFKRLYPNVNIQVQAAGSSTAPPALTEGTSNFGPMSRKMKGKEIEAFESRHGYKPTAIPVAIDALAVYVHKDNPIEGLTIPQVDAIFSATRTCGHPADITTWGDLGLTGEWASRPVQLYGRNSVSGTYGYFKEKALCKGDFKNSVNEQPGSASVVQGVTKSINGIGYSGIGYRTSGVRAVPLAKKAGGDF 759
            VDP +  Y KA GV+GN+SSVGSDTLANLMTLW EEFKRLYPNVNIQ+QAAGSSTAPPALTEGT+N GPMSRKMK +EIEAFE RHGYKPTAIPVAIDALAV+VHKDNPI+GLTIPQVDAIFS+TR CG PAD  TWGDLGLTG WA R +QL+GRNSVSGTYGYFK+KALCKGD+K +VNEQPGSASVVQ VT S+NGIGYSGIGYRT+GVRAVPLAKK G  F
Sbjct:   28 VDPTIPSYHKAPGVAGNLSSVGSDTLANLMTLWAEEFKRLYPNVNIQIQAAGSSTAPPALTEGTANLGPMSRKMKPREIEAFERRHGYKPTAIPVAIDALAVFVHKDNPIKGLTIPQVDAIFSSTRKCGAPADARTWGDLGLTGAWARRDIQLFGRNSVSGTYGYFKKKALCKGDYKPTVNEQPGSASVVQSVTASLNGIGYSGIGYRTTGVRAVPLAKKPGQPF 252          
BLAST of mRNA_M-pyrifera_M_contig90074.20882.1 vs. uniprot
Match: A0A0S2TEG7_9GAMM (Phosphate-binding protein n=1 Tax=Candidatus Tenderia electrophaga TaxID=1748243 RepID=A0A0S2TEG7_9GAMM)

HSP 1 Score: 384 bits (985), Expect = 9.840e-132
Identity = 185/229 (80.79%), Postives = 207/229 (90.39%), Query Frame = 1
Query:   73 ANDAVDPELAEYTKASGVSGNISSVGSDTLANLMTLWTEEFKRLYPNVNIQVQAAGSSTAPPALTEGTSNFGPMSRKMKGKEIEAFESRHGYKPTAIPVAIDALAVYVHKDNPIEGLTIPQVDAIFSATRTCGHPADITTWGDLGLTGEWASRPVQLYGRNSVSGTYGYFKEKALCKGDFKNSVNEQPGSASVVQGVTKSINGIGYSGIGYRTSGVRAVPLAKKAGGDF 759
            A+  VDP+L EY+KASG+SGN+SSVGSDTLANLMTLW EEFKR YPNVNIQ+QAAGSSTAPPALTEGTSN GPMSRKMK KEIE+FE R+GYKPTA+PVAIDALAVYVHKDNPI+G++IP+VDAIFS TR C H  DIT WGDLGL+G WA++ +QLYGRNSVSGTYGYFK+KALCKGD KN+VNEQPGSASVVQ V+ SINGIGYSGIGY+TSGV+AVPLAKK G  F
Sbjct:   23 ADSKVDPKLPEYSKASGISGNLSSVGSDTLANLMTLWAEEFKREYPNVNIQIQAAGSSTAPPALTEGTSNLGPMSRKMKDKEIESFEKRYGYKPTAVPVAIDALAVYVHKDNPIKGMSIPEVDAIFSVTRKCKHDTDITKWGDLGLSGSWANQDIQLYGRNSVSGTYGYFKKKALCKGDAKNTVNEQPGSASVVQSVSASINGIGYSGIGYKTSGVKAVPLAKKPGDPF 251          
BLAST of mRNA_M-pyrifera_M_contig90074.20882.1 vs. uniprot
Match: A0A1G0GEP4_9GAMM (Phosphate-binding protein n=1 Tax=Gammaproteobacteria bacterium RBG_16_51_14 TaxID=1798265 RepID=A0A1G0GEP4_9GAMM)

HSP 1 Score: 384 bits (985), Expect = 1.050e-131
Identity = 188/240 (78.33%), Postives = 210/240 (87.50%), Query Frame = 1
Query:   46 LCAFLPVAGANDA--VDPELAEYTKASGVSGNISSVGSDTLANLMTLWTEEFKRLYPNVNIQVQAAGSSTAPPALTEGTSNFGPMSRKMKGKEIEAFESRHGYKPTAIPVAIDALAVYVHKDNPIEGLTIPQVDAIFSATRTCGHPADITTWGDLGLTGEWASRPVQLYGRNSVSGTYGYFKEKALCKGDFKNSVNEQPGSASVVQGVTKSINGIGYSGIGYRTSGVRAVPLAKKAGGDF 759
            L + LP     DA  VDP L EYT ASGVSG++ SVGSDTLANLMT W EEFKRLYPNV++Q+QAAGSSTAPPALTEGT+NFGPMSRKMK KE   FESRHGYKPT I VAIDALAVYV+KDNP++GLTI QVDAIFSATR CGHP DIT+WG LGL G WAS+P+Q++GRNSVSGTYG+FKE+ALCKGD+KN+VNEQPGSASVVQGVTKS+NGIGYSGIGYRTSGV+AVPLAK  G D+
Sbjct:   13 LASLLPAGAMADAGLVDPALPEYTAASGVSGSVISVGSDTLANLMTFWAEEFKRLYPNVSVQIQAAGSSTAPPALTEGTANFGPMSRKMKDKEEADFESRHGYKPTPIAVAIDALAVYVNKDNPVQGLTIEQVDAIFSATRKCGHPEDITSWGQLGLDGTWASQPIQIFGRNSVSGTYGFFKEEALCKGDYKNTVNEQPGSASVVQGVTKSLNGIGYSGIGYRTSGVKAVPLAKSQGEDY 252          
BLAST of mRNA_M-pyrifera_M_contig90074.20882.1 vs. uniprot
Match: A0A1D3RLL3_9BACT (Phosphate-binding protein n=2 Tax=Bacteria TaxID=2 RepID=A0A1D3RLL3_9BACT)

HSP 1 Score: 382 bits (982), Expect = 3.230e-131
Identity = 188/250 (75.20%), Postives = 215/250 (86.00%), Query Frame = 1
Query:   13 KIQSLAFL-YIALCAFLPVAGANDAVDPELAEYTKASGVSGNISSVGSDTLANLMTLWTEEFKRLYPNVNIQVQAAGSSTAPPALTEGTSNFGPMSRKMKGKEIEAFESRHGYKPTAIPVAIDALAVYVHKDNPIEGLTIPQVDAIFSATRTCGHPADITTWGDLGLTGEWASRPVQLYGRNSVSGTYGYFKEKALCKGDFKNSVNEQPGSASVVQGVTKSINGIGYSGIGYRTSGVRAVPLAKKAGGDF 759
            K++SLA   ++        A A   VDP+L +Y KASGVSGN+SSVGSDTLANLMTLW E FKR YPNVNIQ+QAAGSSTAPPALTE T+N GPMSRKMK KE++AFE ++GYKPTAIPVAIDALAVYV+KDNPIEG+TIPQVDA+ S+TR CG+P DITTWGDLGLTG W ++ +QLYGRNSVSGTYGYFK+KALCKGDFKN+VNEQPGSASVVQ V+ S+NGIGYSGIGY+TSGV+AV L KKAGG F
Sbjct:    6 KVRSLAAAGFVTAVLVSTSANAVQTVDPKLPDYQKASGVSGNLSSVGSDTLANLMTLWAESFKRNYPNVNIQIQAAGSSTAPPALTEATANIGPMSRKMKDKELDAFERKYGYKPTAIPVAIDALAVYVNKDNPIEGMTIPQVDAVMSSTRKCGYPTDITTWGDLGLTGSWKNKSIQLYGRNSVSGTYGYFKKKALCKGDFKNNVNEQPGSASVVQSVSTSLNGIGYSGIGYKTSGVKAVALTKKAGGAF 255          
BLAST of mRNA_M-pyrifera_M_contig90074.20882.1 vs. uniprot
Match: A0A7C5JFD7_9GAMM (Phosphate-binding protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C5JFD7_9GAMM)

HSP 1 Score: 382 bits (981), Expect = 3.990e-131
Identity = 184/225 (81.78%), Postives = 202/225 (89.78%), Query Frame = 1
Query:   85 VDPELAEYTKASGVSGNISSVGSDTLANLMTLWTEEFKRLYPNVNIQVQAAGSSTAPPALTEGTSNFGPMSRKMKGKEIEAFESRHGYKPTAIPVAIDALAVYVHKDNPIEGLTIPQVDAIFSATRTCGHPADITTWGDLGLTGEWASRPVQLYGRNSVSGTYGYFKEKALCKGDFKNSVNEQPGSASVVQGVTKSINGIGYSGIGYRTSGVRAVPLAKKAGGDF 759
            VDP+L +Y  ASGVSGN+SSVGSDTLANLMTLW EEFKR YPNVNIQ+QAAGSSTAPPALTEGT+N GPMSRKMK KEI+AFESR GYKPTA+PVAIDALAVYVHKDNPI+GLTIPQVDAIFS+TR CG+  DI  WGDLGL G W  R +Q+YGRNSVSGTYGYFK+KALCKGDFKN+VNEQPGSASVVQ V+ S+NGIGYSGIGY+TSGV+AVPLAKK G  F
Sbjct:   27 VDPDLPDYQPASGVSGNLSSVGSDTLANLMTLWAEEFKRQYPNVNIQIQAAGSSTAPPALTEGTANIGPMSRKMKSKEIQAFESRFGYKPTAVPVAIDALAVYVHKDNPIKGLTIPQVDAIFSSTRKCGYKTDIARWGDLGLEGSWKKRSIQIYGRNSVSGTYGYFKKKALCKGDFKNNVNEQPGSASVVQSVSSSLNGIGYSGIGYKTSGVKAVPLAKKPGKPF 251          
BLAST of mRNA_M-pyrifera_M_contig90074.20882.1 vs. uniprot
Match: A0A7C5Q8Y1_9GAMM (Phosphate-binding protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C5Q8Y1_9GAMM)

HSP 1 Score: 382 bits (981), Expect = 4.280e-131
Identity = 187/249 (75.10%), Postives = 214/249 (85.94%), Query Frame = 1
Query:   13 KIQSLAFLYIALCAFLPVAGANDAVDPELAEYTKASGVSGNISSVGSDTLANLMTLWTEEFKRLYPNVNIQVQAAGSSTAPPALTEGTSNFGPMSRKMKGKEIEAFESRHGYKPTAIPVAIDALAVYVHKDNPIEGLTIPQVDAIFSATRTCGHPADITTWGDLGLTGEWASRPVQLYGRNSVSGTYGYFKEKALCKGDFKNSVNEQPGSASVVQGVTKSINGIGYSGIGYRTSGVRAVPLAKKAGGDF 759
            +I + A +  A     PV  AN  VDP+L  Y+K SGVSGN+SSVGSDTLANLMTLW+E+FKR YPNVNIQ+QAAGSSTAPPALTEGTSN GPMSRKMK KEIEAFE R+GYKPTAI VAIDALAV+VHKDNP++G+T+PQVDA+FS+TR CG+P D+T WG LGL G W+ R +QLYGRNSVSGTYGYFK+KALCKGD+KN+VNEQPGSASVVQ V+KS+NGIGYSGIGY+TSGVR VPLAKK G  F
Sbjct:    6 RILAAALMTAATVLSAPVRAANK-VDPDLPAYSKVSGVSGNLSSVGSDTLANLMTLWSEDFKRAYPNVNIQIQAAGSSTAPPALTEGTSNLGPMSRKMKSKEIEAFERRYGYKPTAIRVAIDALAVFVHKDNPLKGMTLPQVDAVFSSTRRCGYPEDVTRWGQLGLGGAWSHRAIQLYGRNSVSGTYGYFKKKALCKGDYKNNVNEQPGSASVVQSVSKSLNGIGYSGIGYKTSGVRTVPLAKKKGQPF 253          
BLAST of mRNA_M-pyrifera_M_contig90074.20882.1 vs. uniprot
Match: A0A426QHP4_9GAMM (Phosphate-binding protein n=6 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A426QHP4_9GAMM)

HSP 1 Score: 382 bits (980), Expect = 5.290e-131
Identity = 183/225 (81.33%), Postives = 206/225 (91.56%), Query Frame = 1
Query:   85 VDPELAEYTKASGVSGNISSVGSDTLANLMTLWTEEFKRLYPNVNIQVQAAGSSTAPPALTEGTSNFGPMSRKMKGKEIEAFESRHGYKPTAIPVAIDALAVYVHKDNPIEGLTIPQVDAIFSATRTCGHPADITTWGDLGLTGEWASRPVQLYGRNSVSGTYGYFKEKALCKGDFKNSVNEQPGSASVVQGVTKSINGIGYSGIGYRTSGVRAVPLAKKAGGDF 759
            +D +L +Y K+SGVSGN+SSVGSDTLANLMTLW EEFKR+YPNVNIQ+QAAGSSTAPPALTEGTSN GPMSRKMK KE+EAFE R+GYKPT I VAIDALAV+VHKDNPIEGL+IPQVDA+FS+TR CG   D++TWGDLGLTG WASRPVQLYGRNSVSGTYGYFK+ ALCKGD+KN+VNEQPGSASVVQ VT S+NGIGYSGIGY+TSGVRA+P+A K GG+F
Sbjct:   25 LDSDLQDYEKSSGVSGNLSSVGSDTLANLMTLWAEEFKRVYPNVNIQIQAAGSSTAPPALTEGTSNLGPMSRKMKDKELEAFERRYGYKPTPIRVAIDALAVFVHKDNPIEGLSIPQVDAVFSSTRQCGAANDVSTWGDLGLTGAWASRPVQLYGRNSVSGTYGYFKKVALCKGDYKNTVNEQPGSASVVQSVTTSVNGIGYSGIGYKTSGVRALPIAAKDGGEF 249          
BLAST of mRNA_M-pyrifera_M_contig90074.20882.1 vs. uniprot
Match: A0A4P7BWV4_9GAMM (Phosphate-binding protein n=2 Tax=Nitrosococcus TaxID=1227 RepID=A0A4P7BWV4_9GAMM)

HSP 1 Score: 382 bits (980), Expect = 6.290e-131
Identity = 186/229 (81.22%), Postives = 205/229 (89.52%), Query Frame = 1
Query:   73 ANDAVDPELAEYTKASGVSGNISSVGSDTLANLMTLWTEEFKRLYPNVNIQVQAAGSSTAPPALTEGTSNFGPMSRKMKGKEIEAFESRHGYKPTAIPVAIDALAVYVHKDNPIEGLTIPQVDAIFSATRTCGHPADITTWGDLGLTGEWASRPVQLYGRNSVSGTYGYFKEKALCKGDFKNSVNEQPGSASVVQGVTKSINGIGYSGIGYRTSGVRAVPLAKKAGGDF 759
            A + VD +L EY+KASGV+GN+SSVGSDTLANLMTLW EEFK+ YPNVNIQ+QAAGSSTAPPALTE T+N GPMSRKMK KE+EAFE ++GYKPT I VAIDALAVYV+KDNPIEG+TIPQVDA+FSATR CG+P DIT WGDL L GEW  R +QL+GRNSVSGTYGYFKE ALCKGDFKN+VNEQPGSASVVQGVTKSINGIGYSGIGYRTSGVRAVPLA KAG  +
Sbjct:   24 AAEQVDSDLKEYSKASGVAGNLSSVGSDTLANLMTLWAEEFKKFYPNVNIQIQAAGSSTAPPALTESTANLGPMSRKMKDKEVEAFEKKYGYKPTPIRVAIDALAVYVNKDNPIEGITIPQVDAVFSATRKCGYPKDITMWGDLDLGGEWTHRSLQLFGRNSVSGTYGYFKEAALCKGDFKNTVNEQPGSASVVQGVTKSINGIGYSGIGYRTSGVRAVPLATKAGAPY 252          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90074.20882.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A849MK61_9PROT1.500e-13577.73Phosphate-binding protein n=1 Tax=Proteobacteria b... [more]
A0A3D5DC48_9GAMM8.400e-13483.56Phosphate-binding protein n=1 Tax=Gammaproteobacte... [more]
A0A7C1TJ21_9GAMM7.180e-13283.11Phosphate-binding protein n=1 Tax=Gammaproteobacte... [more]
A0A0S2TEG7_9GAMM9.840e-13280.79Phosphate-binding protein n=1 Tax=Candidatus Tende... [more]
A0A1G0GEP4_9GAMM1.050e-13178.33Phosphate-binding protein n=1 Tax=Gammaproteobacte... [more]
A0A1D3RLL3_9BACT3.230e-13175.20Phosphate-binding protein n=2 Tax=Bacteria TaxID=2... [more]
A0A7C5JFD7_9GAMM3.990e-13181.78Phosphate-binding protein n=1 Tax=Gammaproteobacte... [more]
A0A7C5Q8Y1_9GAMM4.280e-13175.10Phosphate-binding protein n=1 Tax=Gammaproteobacte... [more]
A0A426QHP4_9GAMM5.290e-13181.33Phosphate-binding protein n=6 Tax=Gammaproteobacte... [more]
A0A4P7BWV4_9GAMM6.290e-13181.22Phosphate-binding protein n=2 Tax=Nitrosococcus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90074contigM-pyrifera_M_contig90074:38..796 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score387.9
Seed ortholog evalue3.6e-105
Seed eggNOG ortholog472759.Nhal_2289
Preferred namepstS
KEGG koko:K02040
KEGG TC3.A.1.7
KEGG Pathwayko02010,ko02020,ko05152,map02010,map02020,map05152
KEGG ModuleM00222
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.TIGRFAM phosphate binding protein
EggNOG OGs1MVXP@1224,1RQDH@1236,1WXSW@135613,COG0226@1,COG0226@2
COG Functional cat.P
Best tax levelChromatiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko02000
Exons1
Model size759
Cds size753
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816812.2836452-UTR-M-pyrifera_M_contig90074:37..431622816812.2836452-UTR-M-pyrifera_M_contig90074:37..43Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig90074 38..43 +
1692278193.068106-UTR-M-pyrifera_M_contig90074:37..431692278193.068106-UTR-M-pyrifera_M_contig90074:37..43Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig90074 38..43 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816812.2981062-CDS-M-pyrifera_M_contig90074:43..7961622816812.2981062-CDS-M-pyrifera_M_contig90074:43..796Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90074 44..796 +
1692278193.0815752-CDS-M-pyrifera_M_contig90074:43..7961692278193.0815752-CDS-M-pyrifera_M_contig90074:43..796Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90074 44..796 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90074.20882.1prot_M-pyrifera_M_contig90074.20882.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90074 44..796 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90074.20882.1

>prot_M-pyrifera_M_contig90074.20882.1 ID=prot_M-pyrifera_M_contig90074.20882.1|Name=mRNA_M-pyrifera_M_contig90074.20882.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=251bp
MLKIQSLAFLYIALCAFLPVAGANDAVDPELAEYTKASGVSGNISSVGSD
TLANLMTLWTEEFKRLYPNVNIQVQAAGSSTAPPALTEGTSNFGPMSRKM
KGKEIEAFESRHGYKPTAIPVAIDALAVYVHKDNPIEGLTIPQVDAIFSA
TRTCGHPADITTWGDLGLTGEWASRPVQLYGRNSVSGTYGYFKEKALCKG
DFKNSVNEQPGSASVVQGVTKSINGIGYSGIGYRTSGVRAVPLAKKAGGD
F
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mRNA from alignment at M-pyrifera_M_contig90074:38..796+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90074.20882.1 ID=mRNA_M-pyrifera_M_contig90074.20882.1|Name=mRNA_M-pyrifera_M_contig90074.20882.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=759bp|location=Sequence derived from alignment at M-pyrifera_M_contig90074:38..796+ (Macrocystis pyrifera P11B4 male)
GAGATTATGTTGAAAATTCAATCGCTTGCCTTCCTTTACATCGCGCTCTG CGCGTTTCTGCCCGTGGCTGGTGCAAACGACGCTGTGGACCCGGAGCTGG CTGAATACACGAAGGCGAGCGGGGTTTCCGGCAACATTTCCAGCGTCGGC TCCGACACGCTCGCGAACCTGATGACGCTGTGGACGGAAGAATTCAAACG CCTGTACCCGAATGTGAACATCCAGGTGCAGGCTGCCGGTTCGAGTACAG CGCCGCCGGCCTTGACGGAGGGCACGTCGAATTTCGGCCCGATGAGCCGC AAAATGAAAGGCAAGGAAATCGAGGCGTTCGAGTCCCGTCACGGTTACAA ACCGACTGCAATCCCGGTCGCGATCGACGCCCTCGCGGTTTACGTGCACA AGGACAACCCGATCGAAGGGCTGACGATCCCGCAGGTCGACGCGATATTT TCCGCCACCCGCACCTGCGGCCACCCCGCGGACATTACAACCTGGGGTGA TCTCGGACTAACCGGAGAATGGGCATCCCGCCCGGTCCAGTTGTACGGTC GCAACTCCGTATCCGGTACCTACGGTTACTTCAAGGAAAAGGCTCTGTGC AAGGGCGATTTCAAGAACTCCGTGAATGAGCAACCGGGCTCCGCATCCGT GGTGCAGGGGGTGACGAAATCGATCAACGGTATCGGTTATTCGGGCATCG GATACCGCACTTCGGGCGTGCGCGCGGTGCCGCTGGCGAAGAAAGCCGGC GGCGATTTT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig90074:38..796+

>mRNA_M-pyrifera_M_contig90074.20882.1 ID=mRNA_M-pyrifera_M_contig90074.20882.1|Name=mRNA_M-pyrifera_M_contig90074.20882.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1506bp|location=Sequence derived from alignment at M-pyrifera_M_contig90074:38..796+ (Macrocystis pyrifera P11B4 male)
ATGTTGAAAATTCAATCGCTTGCCTTCCTTTACATCGCGCTCTGCGCGTT
TCTGCCCGTGGCTGGTGCAAACGACGCTGTGGACCCGGAGCTGGCTGAAT
ACACGAAGGCGAGCGGGGTTTCCGGCAACATTTCCAGCGTCGGCTCCGAC
ACGCTCGCGAACCTGATGACGCTGTGGACGGAAGAATTCAAACGCCTGTA
CCCGAATGTGAACATCCAGGTGCAGGCTGCCGGTTCGAGTACAGCGCCGC
CGGCCTTGACGGAGGGCACGTCGAATTTCGGCCCGATGAGCCGCAAAATG
AAAGGCAAGGAAATCGAGGCGTTCGAGTCCCGTCACGGTTACAAACCGAC
TGCAATCCCGGTCGCGATCGACGCCCTCGCGGTTTACGTGCACAAGGACA
ACCCGATCGAAGGGCTGACGATCCCGCAGGTCGACGCGATATTTTCCGCC
ACCCGCACCTGCGGCCACCCCGCGGACATTACAACCTGGGGTGATCTCGG
ACTAACCGGAGAATGGGCATCCCGCCCGGTCCAGTTGTACGGTCGCAACT
CCGTATCCGGTACCTACGGTTACTTCAAGGAAAAGGCTCTGTGCAAGGGC
GATTTCAAGAACTCCGTGAATGAGCAACCGGGCTCCGCATCCGTGGTGCA
GGGGGTGACGAAATCGATCAACGGTATCGGTTATTCGGGCATCGGATACC
GCACTTCGGGCGTGCGCGCGGTGCCGCTGGCGAAGAAAGCCGGCGGCGAT
TTTATGTTGAAAATTCAATCGCTTGCCTTCCTTTACATCGCGCTCTGCGC
GTTTCTGCCCGTGGCTGGTGCAAACGACGCTGTGGACCCGGAGCTGGCTG
AATACACGAAGGCGAGCGGGGTTTCCGGCAACATTTCCAGCGTCGGCTCC
GACACGCTCGCGAACCTGATGACGCTGTGGACGGAAGAATTCAAACGCCT
GTACCCGAATGTGAACATCCAGGTGCAGGCTGCCGGTTCGAGTACAGCGC
CGCCGGCCTTGACGGAGGGCACGTCGAATTTCGGCCCGATGAGCCGCAAA
ATGAAAGGCAAGGAAATCGAGGCGTTCGAGTCCCGTCACGGTTACAAACC
GACTGCAATCCCGGTCGCGATCGACGCCCTCGCGGTTTACGTGCACAAGG
ACAACCCGATCGAAGGGCTGACGATCCCGCAGGTCGACGCGATATTTTCC
GCCACCCGCACCTGCGGCCACCCCGCGGACATTACAACCTGGGGTGATCT
CGGACTAACCGGAGAATGGGCATCCCGCCCGGTCCAGTTGTACGGTCGCA
ACTCCGTATCCGGTACCTACGGTTACTTCAAGGAAAAGGCTCTGTGCAAG
GGCGATTTCAAGAACTCCGTGAATGAGCAACCGGGCTCCGCATCCGTGGT
GCAGGGGGTGACGAAATCGATCAACGGTATCGGTTATTCGGGCATCGGAT
ACCGCACTTCGGGCGTGCGCGCGGTGCCGCTGGCGAAGAAAGCCGGCGGC
GATTTT
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