mRNA_M-pyrifera_M_contig90067.20879.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig90067.20879.1 vs. uniprot
Match: A0A3D5DC19_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DC19_9GAMM) HSP 1 Score: 429 bits (1104), Expect = 5.510e-148 Identity = 207/240 (86.25%), Postives = 221/240 (92.08%), Query Frame = 1 Query: 1 PRKNARTLTAAQIDAILPAPPPEDPAPRTPAEFIDQFRGWVWLAIVLLAYPLGHAIVENGFGTSWTINAYNITFLVLALALHGKPLPFLRACRAGVDSAWGIIVQFPFYAGIFGLLQFTGLGKWLGTLFADLATTTTYPFIVYVYSGFMNLFVPSAGSKWMIEAPFLIPAGEILDVSVVTITLAYAYGDSLTNLIQPFFAIPILAVTRMRFGDVVGYTLLVAMAVFVVTTIAIFMLPTNL 720 PRK+ARTLTA QID ILP PPP DP P TPA++IDQFRGW WLA++LL YPLGHAIV GFGTSWTINAYNITFLVLAL LHGKPLPFLRACRAGVDSAWGIIVQFPFYAGIFGLLQFTGLGKWLG+LF+D AT TTYPFIVYVYSGFMNLFVPSAGSKWMIEAPFLIPAG+ LDVSVVTITLAYAYGDS+TNLIQPFFAIPILAVTRM+FGDVVGYT LVA A F VT+I +F+LP+NL Sbjct: 222 PRKDARTLTADQIDRILPTPPPADPTPSTPADYIDQFRGWTWLAVLLLTYPLGHAIVTRGFGTSWTINAYNITFLVLALILHGKPLPFLRACRAGVDSAWGIIVQFPFYAGIFGLLQFTGLGKWLGSLFSDFATQTTYPFIVYVYSGFMNLFVPSAGSKWMIEAPFLIPAGQTLDVSVVTITLAYAYGDSMTNLIQPFFAIPILAVTRMKFGDVVGYTFLVAAACFAVTSIGMFLLPSNL 461
BLAST of mRNA_M-pyrifera_M_contig90067.20879.1 vs. uniprot
Match: A0A1Z9UK60_9GAMM (Uncharacterized protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9UK60_9GAMM) HSP 1 Score: 370 bits (951), Expect = 8.280e-125 Identity = 180/239 (75.31%), Postives = 203/239 (84.94%), Query Frame = 1 Query: 1 PRKNARTLTAAQIDAILPAPPPEDPAPRTPAEFIDQFRGWVWLAIVLLAYPLGHAIVENGFGTSWTINAYNITFLVLALALHGKPLPFLRACRAGVDSAWGIIVQFPFYAGIFGLLQFTGLGKWLGTLFADLATTTTYPFIVYVYSGFMNLFVPSAGSKWMIEAPFLIPAGEILDVSVVTITLAYAYGDSLTNLIQPFFAIPILAVTRMRFGDVVGYTLLVAMAVFVVTTIAIFMLPTN 717 PR ART++ + ILP PP D TPA IDQFRGW+ LA+VLLAYPLGH+I+ GFGTSWTINAYNITFLVLAL LHG+ FLRACR GVDSAWG+IVQFPFYAGIFGL+Q T LG+WLG LFA ++TT TYP++VYVYSGFMNLFVPSAGSKWMIEAPFLIPAGE LDVSVVT+ LAYAYGDS+TNLIQPFFAIPILAVTRMRFGD+VGYT LVA+ FVV++IA+FM+P Sbjct: 220 PRTGARTISPEDAEKILPKPPVLDEKASTPASHIDQFRGWILLAVVLLAYPLGHSIMTRGFGTSWTINAYNITFLVLALILHGRAPSFLRACRNGVDSAWGVIVQFPFYAGIFGLMQKTDLGEWLGNLFATISTTETYPWVVYVYSGFMNLFVPSAGSKWMIEAPFLIPAGEQLDVSVVTVMLAYAYGDSVTNLIQPFFAIPILAVTRMRFGDIVGYTFLVALVCFVVSSIAMFMIPAQ 458
BLAST of mRNA_M-pyrifera_M_contig90067.20879.1 vs. uniprot
Match: A0A2E9GM11_9DELT (Short-chain fatty acid transporter n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E9GM11_9DELT) HSP 1 Score: 349 bits (896), Expect = 1.820e-116 Identity = 164/240 (68.33%), Postives = 196/240 (81.67%), Query Frame = 1 Query: 1 PRKNARTLTAAQIDAILPAPPPEDPAPRTPAEFIDQFRGWVWLAIVLLAYPLGHAIVENGFGTSWTINAYNITFLVLALALHGKPLPFLRACRAGVDSAWGIIVQFPFYAGIFGLLQFTGLGKWLGTLFADLATTTTYPFIVYVYSGFMNLFVPSAGSKWMIEAPFLIPAGEILDVSVVTITLAYAYGDSLTNLIQPFFAIPILAVTRMRFGDVVGYTLLVAMAVFVVTTIAIFMLPTNL 720 PR++ T T Q++A+LP P DP P+TP +D FRGW WLA +LLAYPLGH+I+ GFGTSWTI+AYN+TFL AL LHG+PLPFLRACR GVD+AWGII+QFPFYAGIFGL+Q TGLG W+G FAD A+ +YPF+VY YS MNLFVPSAGSKW+IEAPFL+PA E LDVSVVT+ LAYAYGDS TNLIQPFFAIPILAVTR+RFG++VGYT L+A A F V+ +A+ ++P L Sbjct: 221 PRRDPVTFTPQQVEAMLPTLPAVDPPPKTPGGRLDAFRGWNWLAALLLAYPLGHSILSRGFGTSWTIDAYNVTFLTAALLLHGRPLPFLRACRDGVDAAWGIILQFPFYAGIFGLMQNTGLGAWIGGFFADFASQGSYPFVVYSYSAVMNLFVPSAGSKWLIEAPFLLPAAEQLDVSVVTVLLAYAYGDSTTNLIQPFFAIPILAVTRIRFGEIVGYTFLIACACFAVSALAMVLIPARL 460
BLAST of mRNA_M-pyrifera_M_contig90067.20879.1 vs. uniprot
Match: A0A2D6BHF4_9DELT (Short-chain fatty acid transporter n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D6BHF4_9DELT) HSP 1 Score: 338 bits (868), Expect = 4.390e-112 Identity = 161/234 (68.80%), Postives = 191/234 (81.62%), Query Frame = 1 Query: 19 TLTAAQIDAILPAPPPEDPAPRTPAEFIDQFRGWVWLAIVLLAYPLGHAIVENGFGTSWTINAYNITFLVLALALHGKPLPFLRACRAGVDSAWGIIVQFPFYAGIFGLLQFTGLGKWLGTLFADLATTTTYPFIVYVYSGFMNLFVPSAGSKWMIEAPFLIPAGEILDVSVVTITLAYAYGDSLTNLIQPFFAIPILAVTRMRFGDVVGYTLLVAMAVFVVTTIAIFMLPTNL 720 TL Q+DAILP PP + +P I+ FRGWVWLA +L+AYPLGH+I GFGTSWTINAYN FLV AL LHG+PL FL ACR G+D+AWGI+VQFPFYAGIFG++ TGLG W+G LFA LA+ ++YPF+VY YSG MNLFVPSAGSKW+IEAPFLIPAGE LDVSVVT+ LAYAYGDS TNLIQPF+AIPILAVTR+RFGDVVGY LL+A A F+ +++A+ ++P L Sbjct: 238 TLRPEQVDAILPRPPDPPRSDGSPRGRIEGFRGWVWLAALLIAYPLGHSIATQGFGTSWTINAYNAAFLVAALLLHGRPLAFLGACRRGMDAAWGIVVQFPFYAGIFGIMVHTGLGTWIGDLFARLASQSSYPFVVYAYSGLMNLFVPSAGSKWLIEAPFLIPAGEALDVSVVTVLLAYAYGDSTTNLIQPFWAIPILAVTRLRFGDVVGYLLLIAAACFLASSVAMALIPAQL 471
BLAST of mRNA_M-pyrifera_M_contig90067.20879.1 vs. uniprot
Match: A0A7Y3GDU2_9DELT (Short-chain fatty acid transporter n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y3GDU2_9DELT) HSP 1 Score: 337 bits (863), Expect = 1.840e-111 Identity = 162/240 (67.50%), Postives = 191/240 (79.58%), Query Frame = 1 Query: 1 PRKNARTLTAAQIDAILPAPPPEDPAPRTPAEFIDQFRGWVWLAIVLLAYPLGHAIVENGFGTSWTINAYNITFLVLALALHGKPLPFLRACRAGVDSAWGIIVQFPFYAGIFGLLQFTGLGKWLGTLFADLATTTTYPFIVYVYSGFMNLFVPSAGSKWMIEAPFLIPAGEILDVSVVTITLAYAYGDSLTNLIQPFFAIPILAVTRMRFGDVVGYTLLVAMAVFVVTTIAIFMLPTNL 720 PRK+ TL +I A++P PPPE A TPA +D FRGWV LA++L+AYPLGH+IV GFGTSWTINAYN+ FL AL LHG+ L FL ACR GVD+AWGII+QFPFYAGIFGL+ T LG WLG LFA ++T ++P +VYVYS FMNLFVP+AGSKW+IEAPFLIPAGE L VSV T+ LAY+YGDS TNLIQPFFAIPIL V R+RFGDVVGYT LVA+A F V +A+ ++P NL Sbjct: 222 PRKDVLTLAPERIAALVPKPPPEPVARDTPAGRMDAFRGWVILAVILMAYPLGHSIVTRGFGTSWTINAYNVVFLCTALLLHGRALSFLEACRRGVDAAWGIILQFPFYAGIFGLMTHTNLGAWLGELFARASSTGSFPLVVYVYSAFMNLFVPTAGSKWLIEAPFLIPAGEELGVSVTTLLLAYSYGDSTTNLIQPFFAIPILTVMRLRFGDVVGYTFLVALACFAVNVVAMLLIPANL 461
BLAST of mRNA_M-pyrifera_M_contig90067.20879.1 vs. uniprot
Match: A0A524L4V9_9DELT (Short-chain fatty acid transporter n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A524L4V9_9DELT) HSP 1 Score: 332 bits (851), Expect = 1.160e-109 Identity = 164/240 (68.33%), Postives = 188/240 (78.33%), Query Frame = 1 Query: 1 PRKNARTLTAAQIDAILPAPPPEDPAPRTPAEFIDQFRGWVWLAIVLLAYPLGHAIVENGFGTSWTINAYNITFLVLALALHGKPLPFLRACRAGVDSAWGIIVQFPFYAGIFGLLQFTGLGKWLGTLFADLATTTTYPFIVYVYSGFMNLFVPSAGSKWMIEAPFLIPAGEILDVSVVTITLAYAYGDSLTNLIQPFFAIPILAVTRMRFGDVVGYTLLVAMAVFVVTTIAIFMLPTNL 720 PR+ A TLT Q+ AILP+PP P TP ID FRGW WLA +LLA PLG AI GFGTSWTINAYN FL AL LHG+PL FLRACRAG+DSAWGIIVQFPFYAGIFG++Q TGLG+WL TLF LAT +YP IVY Y+ +N FVPSAGSKW+IEAP+LI AGE L VSVV++ L Y YGDS TNLIQPFFAIP+LAVTR+RFGDVVGYT LVA+A F T +A+ ++PT+L Sbjct: 221 PRRGAVTLTPEQVAAILPSPPEALAEPVTPGGRIDAFRGWTWLAALLLAAPLGFAIATRGFGTSWTINAYNAVFLATALVLHGRPLAFLRACRAGLDSAWGIIVQFPFYAGIFGVMQNTGLGRWLETLFVGLATRESYPAIVYCYTAVVNFFVPSAGSKWLIEAPYLIGAGEQLGVSVVSVLLPYTYGDSTTNLIQPFFAIPMLAVTRLRFGDVVGYTFLVAVACFATTLVAMALIPTDL 460
BLAST of mRNA_M-pyrifera_M_contig90067.20879.1 vs. uniprot
Match: A0A6B1AK64_9BACT (Short-chain fatty acid transporter n=9 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A6B1AK64_9BACT) HSP 1 Score: 316 bits (810), Expect = 2.000e-103 Identity = 149/237 (62.87%), Postives = 185/237 (78.06%), Query Frame = 1 Query: 1 PRKNARTLTAAQIDAILPAPPPEDPAPRTPAEFIDQFRGWVWLAIVLLAYPLGHAIVENGFGTSWTINAYNITFLVLALALHGKPLPFLRACRAGVDSAWGIIVQFPFYAGIFGLLQFTGLGKWLGTLFADLATTTTYPFIVYVYSGFMNLFVPSAGSKWMIEAPFLIPAGEILDVSVVTITLAYAYGDSLTNLIQPFFAIPILAVTRMRFGDVVGYTLLVAMAVFVVTTIAIFMLP 711 P ++A TLT A++D ILPAPPP A TPAE +D+FRGW LA +L AYPL H+I+ GFG SWTINAYN FLVLA+ LHG+P FLRACR GV +AWGI++QFPFYAGIFGL+Q T LG WLG FA +ATT YP +VYVYSG M++F+PSAGSKWMIEAP++IPAGE LDVSV+T+ LAY YGDS NLI PF+A+PILAVTR RFG+++GY L+ +A ++ + ++P Sbjct: 224 PHRDAVTLTEAEVDEILPAPPPRAGAATTPAERLDRFRGWSLLAALLFAYPLIHSIITRGFGASWTINAYNTVFLVLAIVLHGRPTSFLRACRDGVGAAWGIVLQFPFYAGIFGLIQNTNLGGWLGEQFAAVATTRLYPLVVYVYSGIMSMFIPSAGSKWMIEAPYVIPAGEALDVSVMTVLLAYTYGDSAFNLIHPFWALPILAVTRRRFGEILGYAFLLWLATILLGVATMLVIP 460
BLAST of mRNA_M-pyrifera_M_contig90067.20879.1 vs. uniprot
Match: A0A2E6ZVM1_9BACT (Short-chain fatty acid transporter n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2E6ZVM1_9BACT) HSP 1 Score: 303 bits (776), Expect = 2.620e-98 Identity = 149/240 (62.08%), Postives = 182/240 (75.83%), Query Frame = 1 Query: 1 PRKNARTLTAAQIDAILPAPPPEDPAPRTPAEFIDQFRGWVWLAIVLLAYPLGHAIVENGFGTSWTINAYNITFLVLALALHGKPLPFLRACRAGVDSAWGIIVQFPFYAGIFGLLQFTGLGKWLGTLFADLATTTTYPFIVYVYSGFMNLFVPSAGSKWMIEAPFLIPAGEILDVSVVTITLAYAYGDSLTNLIQPFFAIPILAVTRMRFGDVVGYTLLVAMAVFVVTTIAIFMLPTNL 720 PR+NARTLT +ID ++P P E+ P TPA ++ FRGW LA+VL+ YPLGH+IV GFG SWTINAYN FL+ AL L G P +RA G +A G+I+QFPFYAGIFG++ TGLG WLG +F +ATT TYP IVYVYSG +N+FVPS GSKW+IEAP+L+PA L VS T LAYAYGDS +NLIQPF+AIPIL VTRM+FGDV+GYT LVA+A+F VT IA+F++P L Sbjct: 224 PRQNARTLTPEEIDRMMPVMPTEE-EPTTPAASMEAFRGWTLLAVVLIGYPLGHSIVTQGFGASWTINAYNAVFLIGALLLQGSPANLVRAFANGARTASGVILQFPFYAGIFGVINGTGLGDWLGDIFVTIATTETYPLIVYVYSGIVNVFVPSGGSKWLIEAPYLLPAARELAVSPTTTVLAYAYGDSTSNLIQPFWAIPILTVTRMKFGDVLGYTGLVALALFAVTVIAMFLIPPML 462
BLAST of mRNA_M-pyrifera_M_contig90067.20879.1 vs. uniprot
Match: A0A520W457_9BACT (Short-chain fatty acid transporter n=2 Tax=Bacteria TaxID=2 RepID=A0A520W457_9BACT) HSP 1 Score: 298 bits (764), Expect = 1.900e-96 Identity = 143/240 (59.58%), Postives = 184/240 (76.67%), Query Frame = 1 Query: 1 PRKNARTLTAAQIDAILPAPPPEDPAPRTPAEFIDQFRGWVWLAIVLLAYPLGHAIVENGFGTSWTINAYNITFLVLALALHGKPLPFLRACRAGVDSAWGIIVQFPFYAGIFGLLQFTGLGKWLGTLFADLATTTTYPFIVYVYSGFMNLFVPSAGSKWMIEAPFLIPAGEILDVSVVTITLAYAYGDSLTNLIQPFFAIPILAVTRMRFGDVVGYTLLVAMAVFVVTTIAIFMLPTNL 720 PRKNA+TLT+ +I+ +LP P E PA TPA ++ FRGW++LA +L+ YPLG+++V GFG +WTINAYN FLV AL L G+P ++A G +A G+I+QFPFYAGIFG++ TGLG WLG LF ATT TYP +VY YSGFMN+FVPSAGSKW+IEAP+L+PA + L VS T LAYAYGDS TNLIQPF+AIPIL VTR++FGDV+GYT +VA+ +++ IA+ ++P NL Sbjct: 228 PRKNAQTLTSDEIERMLPKLPEEKPA-TTPAARMESFRGWIFLAAILIGYPLGYSMVTRGFGATWTINAYNAVFLVSALLLQGRPSNLVQAFSNGARTASGVILQFPFYAGIFGVINNTGLGSWLGDLFVTFATTETYPLVVYFYSGFMNIFVPSAGSKWLIEAPYLLPAAKELGVSATTTVLAYAYGDSTTNLIQPFWAIPILTVTRLKFGDVLGYTGIVAIVCMIISVIAMLLIPPNL 466
BLAST of mRNA_M-pyrifera_M_contig90067.20879.1 vs. uniprot
Match: A0A6B1DFQ9_9BACT (Short-chain fatty acid transporter n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A6B1DFQ9_9BACT) HSP 1 Score: 295 bits (755), Expect = 3.730e-95 Identity = 141/240 (58.75%), Postives = 183/240 (76.25%), Query Frame = 1 Query: 1 PRKNARTLTAAQIDAILPAPPPEDPAPRTPAEFIDQFRGWVWLAIVLLAYPLGHAIVENGFGTSWTINAYNITFLVLALALHGKPLPFLRACRAGVDSAWGIIVQFPFYAGIFGLLQFTGLGKWLGTLFADLATTTTYPFIVYVYSGFMNLFVPSAGSKWMIEAPFLIPAGEILDVSVVTITLAYAYGDSLTNLIQPFFAIPILAVTRMRFGDVVGYTLLVAMAVFVVTTIAIFMLPTNL 720 PR+N +TL++ QID ++PA P E P P++PA ++ FRGW+ LA +L+ YPLG+++V GFG +WTINAYN FLV AL L G+P +RA G +A G+I+QFPFYAGIFG++ TGLG WLG LF ATT TYP +VY YSGF+NLFVPS GSKW+IEAP+L+PA L VS T LAYAYGDS+TN IQPF+AIPIL VTR++FGDV+GYT +VA+ +++ IA+F++P NL Sbjct: 223 PRRNIQTLSSEQIDQMMPALPDEQP-PQSPAHRMEAFRGWIVLAAILIGYPLGYSMVTRGFGATWTINAYNAVFLVTALLLQGRPSNIVRAFGNGARTASGVILQFPFYAGIFGVINNTGLGAWLGELFVTFATTETYPAVVYFYSGFVNLFVPSGGSKWLIEAPYLLPAARELGVSPTTTVLAYAYGDSITNFIQPFWAIPILTVTRLKFGDVLGYTGIVAIVCTIISVIAMFLIPPNL 461 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90067.20879.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig90067.20879.1 >prot_M-pyrifera_M_contig90067.20879.1 ID=prot_M-pyrifera_M_contig90067.20879.1|Name=mRNA_M-pyrifera_M_contig90067.20879.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=241bp PRKNARTLTAAQIDAILPAPPPEDPAPRTPAEFIDQFRGWVWLAIVLLAYback to top mRNA from alignment at M-pyrifera_M_contig90067:74..796- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig90067.20879.1 ID=mRNA_M-pyrifera_M_contig90067.20879.1|Name=mRNA_M-pyrifera_M_contig90067.20879.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=723bp|location=Sequence derived from alignment at M-pyrifera_M_contig90067:74..796- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig90067:74..796- >mRNA_M-pyrifera_M_contig90067.20879.1 ID=mRNA_M-pyrifera_M_contig90067.20879.1|Name=mRNA_M-pyrifera_M_contig90067.20879.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1446bp|location=Sequence derived from alignment at M-pyrifera_M_contig90067:74..796- (Macrocystis pyrifera P11B4 male)back to top |