mRNA_M-pyrifera_M_contig90033.20863.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90033.20863.1
Unique NamemRNA_M-pyrifera_M_contig90033.20863.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig90033.20863.1 vs. uniprot
Match: A0A7S1CK24_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CK24_9STRA)

HSP 1 Score: 178 bits (452), Expect = 5.900e-52
Identity = 87/179 (48.60%), Postives = 127/179 (70.95%), Query Frame = 1
Query:    1 SDDMRATLHLNSGKLCLAQEAHEKALFELAQSVYLYSVGHGPDHIVTAPGYYCLGSVFIQQGEAERALAVFDKVVDVWYKFLASIRTTDDDVVEVTDAQLAEALSMLRKVLAVRQKYLGETHIATGEVRYTLGLLHLFLGNIQDAERNIAVADEVYEQHLGEDHPSAQDVHQVLRQVQD 537
            S+ +R+ LH N GKL  +Q    +AL ELA  +Y  S+  GP+H+ TA GYY + ++F  Q + E ALA +DKVVD+WYKFL S+R+  +++  +++AQLAEA++MLR + A R+KYLG  HIATGE +YT+GLL LF G+ + A R +  A +VY +HLG++HPS  DV +VL Q+++
Sbjct:  139 SNTIRSKLHRNFGKLYASQGKFPEALKELAVDIYYSSLEFGPEHVDTAAGYYHMATIFYTQNKIENALAFYDKVVDIWYKFLVSVRSNSEEIDAMSEAQLAEAMAMLRSIGATREKYLGAGHIATGEAQYTMGLLQLFTGDNESARRCVETALDVYVEHLGDEHPSTLDVKEVLSQLRE 317          
BLAST of mRNA_M-pyrifera_M_contig90033.20863.1 vs. uniprot
Match: A0A7S2V026_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V026_9STRA)

HSP 1 Score: 175 bits (444), Expect = 3.610e-50
Identity = 87/178 (48.88%), Postives = 123/178 (69.10%), Query Frame = 1
Query:    1 SDDMRATLHLNSGKLCLAQEAHEKALFELAQSVYLYSVGHGPDHIVTAPGYYCLGSVFIQQGEAERALAVFDKVVDVWYKFLASIRTTDDDVVEVTDAQLAEALSMLRKVLAVRQKYLGETHIATGEVRYTLGLLHLFLGNIQDAERNIAVADEVYEQHLGEDHPSAQDVHQVLRQVQ 534
            S+ +R+ LH N GKL  AQ+  E AL ELAQ +Y  S+  GP+H+ T+ GY+ + ++F +Q + + +LA +DKVVD+WYKFLAS+R  ++ V    +AQL E L ML ++L  R   LGE+HIA GE +YTLGLLHLFLGN + A+ N+  A +VY  HLG  HPS  DV +V++Q++
Sbjct:  184 SNAIRSQLHRNFGKLYTAQDKLEDALKELAQDIYSSSLEVGPEHVDTSAGYFLVANIFYKQRKIQNSLAFYDKVVDIWYKFLASVRNDEELVRNFGEAQLTEGLDMLTRILNTRVNLLGESHIAVGEAKYTLGLLHLFLGNKEVAKENLVAASDVYTTHLGVQHPSTTDVMEVIQQLE 361          
BLAST of mRNA_M-pyrifera_M_contig90033.20863.1 vs. uniprot
Match: A0A7S1UB63_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UB63_9STRA)

HSP 1 Score: 172 bits (435), Expect = 2.220e-49
Identity = 89/178 (50.00%), Postives = 121/178 (67.98%), Query Frame = 1
Query:    1 SDDMRATLHLNSGKLCLAQEAHEKALFELAQSVYLYSVGHGPDHIVTAPGYYCLGSVFIQQGEAERALAVFDKVVDVWYKFLASIRTTDDDVVEVTDAQLAEALSMLRKVLAVRQKYLGETHIATGEVRYTLGLLHLFLGNIQDAERNIAVADEVYEQHLGEDHPSAQDVHQVLRQVQ 534
            S  +R+ LH N GKL  AQE    AL EL++ VY  ++  GP+HI T+ GY+ +G+ F  Q   E ALA+FDKVV++WYKFL+S+R   + V + ++AQL E L ML ++L +R K LG+ HIATGE  YT+GLL LF+G  QDA + +  A +VYE HLG +H S  DV +VLRQ+Q
Sbjct:   98 SSAIRSQLHRNFGKLYSAQERFADALRELSKDVYHSALEVGPEHIDTSVGYFHMGNAFYGQQRIENALAMFDKVVEIWYKFLSSVRAEPERVEDFSEAQLNEGLDMLNRILEMRAKLLGQGHIATGEANYTVGLLLLFMGKHQDALKQVQAAHDVYENHLGPEHSSTSDVAEVLRQLQ 275          
BLAST of mRNA_M-pyrifera_M_contig90033.20863.1 vs. uniprot
Match: A0A7S1XU96_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XU96_9STRA)

HSP 1 Score: 172 bits (435), Expect = 2.570e-48
Identity = 89/178 (50.00%), Postives = 121/178 (67.98%), Query Frame = 1
Query:    1 SDDMRATLHLNSGKLCLAQEAHEKALFELAQSVYLYSVGHGPDHIVTAPGYYCLGSVFIQQGEAERALAVFDKVVDVWYKFLASIRTTDDDVVEVTDAQLAEALSMLRKVLAVRQKYLGETHIATGEVRYTLGLLHLFLGNIQDAERNIAVADEVYEQHLGEDHPSAQDVHQVLRQVQ 534
            S  +R+ LH N GKL  AQE    AL EL++ VY  ++  GP+HI T+ GY+ +G+ F  Q   E ALA+FDKVV++WYKFL+S+R   + V + ++AQL E L ML ++L +R K LG+ HIATGE  YT+GLL LF+G  QDA + +  A +VYE HLG +H S  DV +VLRQ+Q
Sbjct:  209 SSAIRSQLHRNFGKLYSAQERFADALRELSKDVYHSALEVGPEHIDTSVGYFHMGNAFYGQQRIENALAMFDKVVEIWYKFLSSVRAEPERVEDFSEAQLNEGLDMLNRILEMRAKLLGQGHIATGEANYTVGLLLLFMGKHQDALKQVQAAHDVYENHLGPEHSSTSDVAEVLRQLQ 386          
BLAST of mRNA_M-pyrifera_M_contig90033.20863.1 vs. uniprot
Match: A0A7S2D7B2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D7B2_9STRA)

HSP 1 Score: 159 bits (402), Expect = 4.730e-44
Identity = 79/175 (45.14%), Postives = 117/175 (66.86%), Query Frame = 1
Query:    1 SDDMRATLHLNSGKLCLAQEAHEKALFELAQSVYLYSVGHGPDHIVTAPGYYCLGSVFIQQGEAERALAVFDKVVDVWYKFLASIRTTDDDVVEVTDAQLAEALSMLRKVLAVRQKYLGETHIATGEVRYTLGLLHLFLGNIQDAERNIAVADEVYEQHLGEDHPSAQDVHQVLR 525
            S  +R+ LH N G+L LAQ   + AL EL + VY  S+  GP+H+VT+ GYY +  +F  Q   E ALA +DKV+D+WYKFLAS+R+      +++++QL E + M++ +   R K LG+ HIA+ E +YTLGLL++F+G+ + A   +  A+ VY +HLG DHPS +DV QVL+
Sbjct:  183 SQVIRSQLHRNFGRLYLAQGKLDDALRELTKDVYCLSLEKGPEHVVTSGGYYHMAGIFYTQHRVECALAFYDKVIDIWYKFLASLRSDSTLAEDISESQLQEGVDMIKYIEHTRVKLLGDDHIASAEAKYTLGLLYIFIGDKKSAFDCLTAAEAVYSRHLGPDHPSTRDVIQVLK 357          
BLAST of mRNA_M-pyrifera_M_contig90033.20863.1 vs. uniprot
Match: A0A6H5KFV3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFV3_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 3.870e-43
Identity = 81/170 (47.65%), Postives = 112/170 (65.88%), Query Frame = 1
Query:   22 LHLNSGKLCLAQEAHEKALFELAQSVYLYSVGHGPDHIVTAPGYYCLGSVFIQQGEAERALAVFDKVVDVWYKFLASIRTTDDDVVEVTDAQLAEALSMLRKVLAVRQKYLGETHIATGEVRYTLGLLHLFLGNIQDAERNIAVADEVYEQHLGEDHPSAQDVHQVLRQV 531
            LH N GKL  AQ   ++AL +L++ VY  S+  GP+HI T+ G++ + ++F  Q + E +LA +DKVVD+WYKFLAS+R   +    V  AQL+E + ML +VL  R   LG+THIATGE R TLGLLHLF+ +   A  ++ +A E+Y Q LG DH S QDV  +L Q+
Sbjct:   10 LHRNFGKLHTAQNKLDEALDDLSKDVYCSSLEVGPEHIDTSAGFFLIANIFYAQRKVESSLAFYDKVVDIWYKFLASVRNDANLAENVGKAQLSEGIDMLTRVLNTRVNLLGDTHIATGEARCTLGLLHLFVADKPAAIDHLTLASEIYTQQLGSDHASTQDVVDILVQL 179          
BLAST of mRNA_M-pyrifera_M_contig90033.20863.1 vs. uniprot
Match: A0A2R5GGV2_9STRA (Zinc finger MYND domain-containing protein 12 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GGV2_9STRA)

HSP 1 Score: 155 bits (392), Expect = 8.950e-43
Identity = 78/174 (44.83%), Postives = 115/174 (66.09%), Query Frame = 1
Query:    4 DDMRATLHLNSGKLCLAQEAHEKALFELAQSVYLYSVGHGPDHIVTAPGYYCLGSVFIQQGEAERALAVFDKVVDVWYKFLASIRTTDDDVVEVTDAQLAEALSMLRKVLAVRQKYLGETHIATGEVRYTLGLLHLFLGNIQD-AERNIAVADEVYEQHLGEDHPSAQDVHQVL 522
            ++++A L    GKLC A+  H +A   LA+ +Y  S+  GP+H+  + GY+ L  VF  Q   E ALA++DKVVD+WYK+L+++R + DD   +++AQ  EA+ ML K+L VR+++LG+ HIATGE  +TLGLL L +    D A+++IA A  +Y  HLG DHPS  DV  +L
Sbjct:  195 NEIKAQLERTFGKLCAAEGKHAEAAEHLAKDIYWTSLASGPEHVKVSVGYFNLACVFDAQHRVEAALALYDKVVDIWYKYLSAVRMSGDDTDPLSEAQCEEAMQMLLKILDVRRQFLGDNHIATGEAHFTLGLLRLLMERELDVAKQSIATAHSLYVSHLGPDHPSTVDVKDLL 368          
BLAST of mRNA_M-pyrifera_M_contig90033.20863.1 vs. uniprot
Match: A0A8J2WXE0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WXE0_9STRA)

HSP 1 Score: 155 bits (391), Expect = 5.650e-42
Identity = 81/178 (45.51%), Postives = 114/178 (64.04%), Query Frame = 1
Query:    1 SDDMRATLHLNSGKLCLAQEAHEKALFELAQSVYLYSVGHGPDHIVTAPGYYCLGSVFIQQGEAERALAVFDKVVDVWYKFLASIRTTDDDVVEVTDAQLAEALSMLRKVLAVRQKYLGETHIATGEVRYTLGLLHLFLG-NIQDAERNIAVADEVYEQHLGEDHPSAQDVHQVLRQV 531
            S+ +R+ LH N GK+  A+   ++AL ELA+ +Y  S+  GP+H+  +PGY+   SVF  Q   E ALA +DKVVD WYKFL   R+  D   +V +A   EA+ MLR+VLA R K LG+ H+ATGE +Y LGLLHLF G ++ +A   +  A + Y +HLG DH   +DV  VL+++
Sbjct:  186 SNALRSKLHRNFGKVYAARGKLDEALDELAKDIYCSSLASGPEHVDASPGYFHAASVFYAQHRIEHALAFYDKVVDAWYKFLVQCRSDPDVGRDVGEAARREAVDMLRRVLATRAKLLGDAHVATGEAKYALGLLHLFNGTDLNEARELVKDAAQTYSKHLGPDHEKTKDVVDVLQRI 363          
BLAST of mRNA_M-pyrifera_M_contig90033.20863.1 vs. uniprot
Match: A0A7S0HHB8_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HHB8_9EUKA)

HSP 1 Score: 142 bits (359), Expect = 3.060e-38
Identity = 77/180 (42.78%), Postives = 114/180 (63.33%), Query Frame = 1
Query:    1 SDDMRATLHLNSGKLCLAQEAHEKALFELAQSVYLYSVGHGPDHIVTAPGYYCLGSVFIQQGEAERALAVFDKVVDVWYKFLASIRTT--DDDVVEVTDAQLAEALSMLRKVLAVRQKYLGETHIATGEVRYTLGLLHLFLGNIQDAERNIAVADEVYEQHLGEDHPSAQDVHQVLRQVQ 534
            S+ +R+ L  N GKL  +Q  +E+AL +LA  VY  S+  GP+HI T+ GY+ LG+VF      E ALA++DKVVD+WYK LAS+     D     +++A+ +E + ML ++L  R++ +GET++ATGE  Y LGLLH + G +Q A+  +  A  +YE  LG +H S  DV + L Q+Q
Sbjct:  148 SNALRSQLRRNFGKLYASQGRYEEALRQLADDVYYSSLMVGPEHIDTSGGYFQLGNVFFAMNRVENALAMYDKVVDIWYKCLASVLAAKADGPAPMLSEAKGSEGIEMLSQILKRREECVGETNLATGESSYILGLLHQYFGEVQQAQARMHAALGIYENRLGAEHHSTMDVAKSLEQLQ 327          
BLAST of mRNA_M-pyrifera_M_contig90033.20863.1 vs. uniprot
Match: A0A7S3JYP9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JYP9_9STRA)

HSP 1 Score: 139 bits (350), Expect = 1.100e-35
Identity = 86/196 (43.88%), Postives = 115/196 (58.67%), Query Frame = 1
Query:    1 SDDMRATLHLNSGKLCLAQEAHEKALFELAQSVYLYSVGHGPDHIVTAPGYYCLGSVFIQQGEAERALAVFDKVVDVWYKFLA------------SIRTTDDDVV--EVTDAQLAEALSMLRKVLAVRQKYLGETHIATGEVRYTLGLLHLFLG-----NIQDAERNIAVADEVYEQHLGEDHPSAQDVHQVLRQV 531
            ++++R+ LH   GKL LAQ   ++AL ELA+ VY  S+ +GP+ I  APGY+   SVF  Q   E+ALA +DK+VD+W+KFLA            S  T DD+ +   V+ AQLA A  ML KV A R K LG  HIA+ E +YTLGLL LF        IQ A  ++  A ++Y   LG +HPS  D+ Q L Q+
Sbjct:  181 TNEIRSKLHRQQGKLYLAQNKFDQALNELAKDVYCASLFYGPESIQVAPGYFYAASVFYAQHRIEQALAFYDKLVDIWFKFLANAQNKHANKNQSSFSTIDDNTLPNNVSRAQLALAADMLAKVHATRAKLLGNQHIASAEAKYTLGLLFLFQNPQDKSTIQIALLHLNEAKDIYFHQLGPNHPSTIDILQCLEQL 376          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90033.20863.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1CK24_9STRA5.900e-5248.60Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S2V026_9STRA3.610e-5048.88Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1UB63_9STRA2.220e-4950.00Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1XU96_9STRA2.570e-4850.00Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2D7B2_9STRA4.730e-4445.14Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6H5KFV3_9PHAE3.870e-4347.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2R5GGV2_9STRA8.950e-4344.83Zinc finger MYND domain-containing protein 12 n=1 ... [more]
A0A8J2WXE0_9STRA5.650e-4245.51Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S0HHB8_9EUKA3.060e-3842.78Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S3JYP9_9STRA1.100e-3543.88Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90033contigM-pyrifera_M_contig90033:125..785 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score125.6
Seed ortholog evalue2.4e-26
Seed eggNOG ortholog115417.EPrPW00000023348
Preferred nameZMYND12
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0044464
EggNOG free text desc.MYND finger family protein. Source PGD
EggNOG OGs1MG7T@121069,28KGW@1,2QSY3@2759
COG Functional cat.S
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
Exons3
Model size537
Cds size528
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90033.20863.1prot_M-pyrifera_M_contig90033.20863.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90033 125..776 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816811.4926178-CDS-M-pyrifera_M_contig90033:124..1811622816811.4926178-CDS-M-pyrifera_M_contig90033:124..181Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90033 125..181 -
1692278192.6108031-CDS-M-pyrifera_M_contig90033:124..1811692278192.6108031-CDS-M-pyrifera_M_contig90033:124..181Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90033 125..181 -
1622816811.5056736-CDS-M-pyrifera_M_contig90033:241..4151622816811.5056736-CDS-M-pyrifera_M_contig90033:241..415Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90033 242..415 -
1692278192.625704-CDS-M-pyrifera_M_contig90033:241..4151692278192.625704-CDS-M-pyrifera_M_contig90033:241..415Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90033 242..415 -
1622816811.5189104-CDS-M-pyrifera_M_contig90033:479..7761622816811.5189104-CDS-M-pyrifera_M_contig90033:479..776Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90033 480..776 -
1692278192.636343-CDS-M-pyrifera_M_contig90033:479..7761692278192.636343-CDS-M-pyrifera_M_contig90033:479..776Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90033 480..776 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816811.5300493-UTR-M-pyrifera_M_contig90033:776..7851622816811.5300493-UTR-M-pyrifera_M_contig90033:776..785Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig90033 777..785 -
1692278192.6487372-UTR-M-pyrifera_M_contig90033:776..7851692278192.6487372-UTR-M-pyrifera_M_contig90033:776..785Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig90033 777..785 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90033.20863.1

>prot_M-pyrifera_M_contig90033.20863.1 ID=prot_M-pyrifera_M_contig90033.20863.1|Name=mRNA_M-pyrifera_M_contig90033.20863.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=176bp
MRATLHLNSGKLCLAQEAHEKALFELAQSVYLYSVGHGPDHIVTAPGYYC
LGSVFIQQGEAERALAVFDKVVDVWYKFLASIRTTDDDVVEVTDAQLAEA
LSMLRKVLAVRQKYLGETHIATGEVRYTLGLLHLFLGNIQDAERNIAVAD
EVYEQHLGEDHPSAQDVHQVLRQVQD
back to top

mRNA from alignment at M-pyrifera_M_contig90033:125..785-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90033.20863.1 ID=mRNA_M-pyrifera_M_contig90033.20863.1|Name=mRNA_M-pyrifera_M_contig90033.20863.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=661bp|location=Sequence derived from alignment at M-pyrifera_M_contig90033:125..785- (Macrocystis pyrifera P11B4 male)
AGCGATGACATGAGGGCAACGCTCCACTTGAACAGTGGCAAGCTGTGTTT GGCACAAGAGGCGCATGAGAAGGCACTGTTTGAGCTGGCACAGAGTGTGT ACCTGTACTCGGTGGGCCACGGGCCAGACCACATTGTCACTGCGCCTGGC TACTACTGCCTGGGGTCTGTGTTCATCCAACAAGGTGAAGCAGAGCGTGC CTTGGCGGTATTTGACAAGGTAGTGGACGTGTGGTACAAGTTCCTGGCAA GCATCCGCACCACAGACGATGATGTGGTGGAAGTGACGGACGCACAGTTG GCAGAGGTACGATTTTCCAGCACTTGTAAGGTGATGCCCCGCTGACTGTT GTCTGGAATCGCCGTTGCAGGCTCTGTCCATGCTCCGCAAGGTGTTAGCT GTACGGCAGAAGTACCTGGGAGAAACACACATTGCCACCGGGGAGGTGCG GTACACGCTTGGCCTGCTGCATCTGTTCCTGGGCAACATCCAAGATGCAG AGCGCAACATTGCTGTTGCGGACGAGGTGTACGAGCAGCACCTGGTGAGA GCGGGATGTTGGTGGGATGCGCACAGCAATGGCTGCTTCTGACGCGGTGC ACAGGGTGAAGACCACCCATCTGCACAGGACGTGCACCAGGTGCTGCGGC AGGTGCAGGAC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig90033:125..785-

>mRNA_M-pyrifera_M_contig90033.20863.1 ID=mRNA_M-pyrifera_M_contig90033.20863.1|Name=mRNA_M-pyrifera_M_contig90033.20863.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1056bp|location=Sequence derived from alignment at M-pyrifera_M_contig90033:125..785- (Macrocystis pyrifera P11B4 male)
ATGAGGGCAACGCTCCACTTGAACAGTGGCAAGCTGTGTTTGGCACAAGA
GGCGCATGAGAAGGCACTGTTTGAGCTGGCACAGAGTGTGTACCTGTACT
CGGTGGGCCACGGGCCAGACCACATTGTCACTGCGCCTGGCTACTACTGC
CTGGGGTCTGTGTTCATCCAACAAGGTGAAGCAGAGCGTGCCTTGGCGGT
ATTTGACAAGGTAGTGGACGTGTGGTACAAGTTCCTGGCAAGCATCCGCA
CCACAGACGATGATGTGGTGGAAGTGACGGACGCACAGTTGGCAGAGATG
AGGGCAACGCTCCACTTGAACAGTGGCAAGCTGTGTTTGGCACAAGAGGC
GCATGAGAAGGCACTGTTTGAGCTGGCACAGAGTGTGTACCTGTACTCGG
TGGGCCACGGGCCAGACCACATTGTCACTGCGCCTGGCTACTACTGCCTG
GGGTCTGTGTTCATCCAACAAGGTGAAGCAGAGCGTGCCTTGGCGGTATT
TGACAAGGTAGTGGACGTGTGGTACAAGTTCCTGGCAAGCATCCGCACCA
CAGACGATGATGTGGTGGAAGTGACGGACGCACAGTTGGCAGAGGCTCTG
TCCATGCTCCGCAAGGTGTTAGCTGTACGGCAGAAGTACCTGGGAGAAAC
ACACATTGCCACCGGGGAGGTGCGGTACACGCTTGGCCTGCTGCATCTGT
TCCTGGGCAACATCCAAGATGCAGAGCGCAACATTGCTGTTGCGGACGAG
GTGTACGAGCAGCACCTGGCTCTGTCCATGCTCCGCAAGGTGTTAGCTGT
ACGGCAGAAGTACCTGGGAGAAACACACATTGCCACCGGGGAGGTGCGGT
ACACGCTTGGCCTGCTGCATCTGTTCCTGGGCAACATCCAAGATGCAGAG
CGCAACATTGCTGTTGCGGACGAGGTGTACGAGCAGCACCTGGGTGAAGA
CCACCCATCTGCACAGGACGTGCACCAGGTGCTGCGGCAGGTGCAGGACG
GTGAAGACCACCCATCTGCACAGGACGTGCACCAGGTGCTGCGGCAGGTG
CAGGAC
back to top