mRNA_M-pyrifera_M_contig89985.20854.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig89985.20854.1 vs. uniprot
Match: A0A2D6U6N2_9ACTN (Endonuclease NucS n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6U6N2_9ACTN) HSP 1 Score: 364 bits (934), Expect = 1.710e-126 Identity = 174/196 (88.78%), Postives = 187/196 (95.41%), Query Frame = 1 Query: 1 LVMVKADGCVAIHADGGAYKPLNWMNAPNRIIEDPGAGVWTVTSPKGEVLTITFHDVISDSSHEMGTDPGLQKDGVEAHLQKLLADDPTSIADGLRLVRREYPTDIGPVDLMCRDADGMAVAIEVKRRGEIDGVEQLTRYLEFLNRDPMLRPVRGIYVAQEIKPQAKVLASDRDIAWVEVDYDELRGIESPNLKLF 588 LVMVKADGCVA+HADGGAYKPLNWMNAPNR+ D AGVWTVTSPKGEVLTITF DV+SD +HEMG DPGLQKDGVEAHLQ+LLADDPTSI DGL+LVRREYPTDIGPVDLMCRDA+G+AVA+EVKRRGEIDGVEQLTRYLEFLNRDP+LRPVRG++VAQEIKPQAKVLA+DRDI WVEVDYDELRGIESPNLKLF Sbjct: 26 LVMVKADGCVAVHADGGAYKPLNWMNAPNRLTMDDEAGVWTVTSPKGEVLTITFEDVLSDVAHEMGIDPGLQKDGVEAHLQQLLADDPTSIQDGLKLVRREYPTDIGPVDLMCRDAEGIAVAVEVKRRGEIDGVEQLTRYLEFLNRDPLLRPVRGVFVAQEIKPQAKVLAADRDIDWVEVDYDELRGIESPNLKLF 221
BLAST of mRNA_M-pyrifera_M_contig89985.20854.1 vs. uniprot
Match: A0A7K1Z800_9ACTN (Endonuclease NucS n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z800_9ACTN) HSP 1 Score: 343 bits (879), Expect = 4.100e-118 Identity = 165/196 (84.18%), Postives = 181/196 (92.35%), Query Frame = 1 Query: 1 LVMVKADGCVAIHADGGAYKPLNWMNAPNRIIEDPGAGVWTVTSPKGEVLTITFHDVISDSSHEMGTDPGLQKDGVEAHLQKLLADDPTSIADGLRLVRREYPTDIGPVDLMCRDADGMAVAIEVKRRGEIDGVEQLTRYLEFLNRDPMLRPVRGIYVAQEIKPQAKVLASDRDIAWVEVDYDELRGIESPNLKLF 588 L+MVKADG VAIHADGGAYKPLNWMN PNR+ ED G+WTVT+PKGEVLTIT H+VISDSS EMG DPGLQKDGVEAHLQ+LLADDPTSI +GLRLVRRE+PT IGPVDLMCRDADG+AVA+EVKRRGEIDGVEQL+RYL+FLNRDP LRPVRG++VAQEIKPQAKVLA DR+I VEVDYDELRGIESPNL+LF Sbjct: 26 LLMVKADGSVAIHADGGAYKPLNWMNPPNRLAEDAEEGIWTVTNPKGEVLTITLHEVISDSSFEMGRDPGLQKDGVEAHLQELLADDPTSITEGLRLVRREFPTSIGPVDLMCRDADGVAVAVEVKRRGEIDGVEQLSRYLDFLNRDPALRPVRGVFVAQEIKPQAKVLAEDREIECVEVDYDELRGIESPNLRLF 221
BLAST of mRNA_M-pyrifera_M_contig89985.20854.1 vs. uniprot
Match: A0A3M2HLJ3_ACTSX (Endonuclease NucS n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2HLJ3_ACTSX) HSP 1 Score: 341 bits (874), Expect = 2.370e-117 Identity = 161/196 (82.14%), Postives = 181/196 (92.35%), Query Frame = 1 Query: 1 LVMVKADGCVAIHADGGAYKPLNWMNAPNRIIEDPGAGVWTVTSPKGEVLTITFHDVISDSSHEMGTDPGLQKDGVEAHLQKLLADDPTSIADGLRLVRREYPTDIGPVDLMCRDADGMAVAIEVKRRGEIDGVEQLTRYLEFLNRDPMLRPVRGIYVAQEIKPQAKVLASDRDIAWVEVDYDELRGIESPNLKLF 588 L+MVKADGCVA+HADGGAYKPLNWMNAPNR++ D AGVW VT+PKGE LTIT +++SD++HEMGTDPGLQKDGVEAHLQ LLA DPTSI +GLRLVRREYPT+IGPVDL+CRDA+G AVA+EVKRRGEIDGVEQLTRYLE+LNRDP LRPVRG++VAQ+IKPQAKVLA DRDIA VEVDYDELRGIESP L+LF Sbjct: 26 LIMVKADGCVAVHADGGAYKPLNWMNAPNRLVIDDDAGVWRVTNPKGESLTITVEEILSDTTHEMGTDPGLQKDGVEAHLQALLAADPTSIGEGLRLVRREYPTEIGPVDLLCRDAEGRAVAVEVKRRGEIDGVEQLTRYLEYLNRDPSLRPVRGVFVAQQIKPQAKVLAGDRDIACVEVDYDELRGIESPELRLF 221
BLAST of mRNA_M-pyrifera_M_contig89985.20854.1 vs. uniprot
Match: A0A6I3AIG5_9ACTN (Endonuclease NucS n=2 Tax=root TaxID=1 RepID=A0A6I3AIG5_9ACTN) HSP 1 Score: 326 bits (835), Expect = 2.070e-111 Identity = 153/196 (78.06%), Postives = 175/196 (89.29%), Query Frame = 1 Query: 1 LVMVKADGCVAIHADGGAYKPLNWMNAPNRIIEDPGAGVWTVTSPKGEVLTITFHDVISDSSHEMGTDPGLQKDGVEAHLQKLLADDPTSIADGLRLVRREYPTDIGPVDLMCRDADGMAVAIEVKRRGEIDGVEQLTRYLEFLNRDPMLRPVRGIYVAQEIKPQAKVLASDRDIAWVEVDYDELRGIESPNLKLF 588 L+MVKADGCVAIHADGGAYKPLNWMNAPNR++ D AG+W VT+ KGE LTIT H+++++ +HE+G DPGL+KDGVEAHLQ+LLA +PT IADGLRLVRREYPTDIGPVDL+CRDA+G VAIE+KRRGEIDGVEQL RYLEFLNRDP+LRPVRGI+VAQEIKPQA+VLA R I WVEVDYDELRGI S L+LF Sbjct: 26 LIMVKADGCVAIHADGGAYKPLNWMNAPNRLVIDEAAGLWVVTNAKGETLTITVHEILAEVNHELGVDPGLRKDGVEAHLQELLAANPTVIADGLRLVRREYPTDIGPVDLLCRDANGATVAIEIKRRGEIDGVEQLARYLEFLNRDPLLRPVRGIFVAQEIKPQARVLAGTRSIGWVEVDYDELRGIVSEELRLF 221
BLAST of mRNA_M-pyrifera_M_contig89985.20854.1 vs. uniprot
Match: A0A2E5ZFS1_9ACTN (Endonuclease NucS n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E5ZFS1_9ACTN) HSP 1 Score: 325 bits (834), Expect = 3.500e-111 Identity = 160/201 (79.60%), Postives = 176/201 (87.56%), Query Frame = 1 Query: 1 LVMVKADGCVAIHADGGAYKPLNWMNAPNRIIE-----DPGAGVWTVTSPKGEVLTITFHDVISDSSHEMGTDPGLQKDGVEAHLQKLLADDPTSIADGLRLVRREYPTDIGPVDLMCRDADGMAVAIEVKRRGEIDGVEQLTRYLEFLNRDPMLRPVRGIYVAQEIKPQAKVLASDRDIAWVEVDYDELRGIESPNLKLF 588 L+MVKADGCVA+HADGGAYKPLNWMNAPN + E D VWTV SPK EVLTIT H+V+++ EMG DPGLQKDGVEAHLQ+LLA DPTSIADGLRLVRRE+PTDIGPVDL+ RDADG AVA+EVKRRGEIDGVEQLTRYL+FLNRDPMLRPVRGI+VAQEI+PQA+VLA DRDI WVEVDYDELRGIES L+LF Sbjct: 26 LLMVKADGCVAVHADGGAYKPLNWMNAPNTLTEVASGEDDVKSVWTVRSPKDEVLTITVHEVLAELDQEMGVDPGLQKDGVEAHLQELLAADPTSIADGLRLVRREFPTDIGPVDLLXRDADGEAVAVEVKRRGEIDGVEQLTRYLDFLNRDPMLRPVRGIFVAQEIRPQARVLADDRDIGWVEVDYDELRGIESDALRLF 226
BLAST of mRNA_M-pyrifera_M_contig89985.20854.1 vs. uniprot
Match: A0A7Y2GKA9_9ACTN (Endonuclease NucS n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GKA9_9ACTN) HSP 1 Score: 324 bits (830), Expect = 1.110e-110 Identity = 159/196 (81.12%), Postives = 176/196 (89.80%), Query Frame = 1 Query: 1 LVMVKADGCVAIHADGGAYKPLNWMNAPNRIIEDPGAGVWTVTSPKGEVLTITFHDVISDSSHEMGTDPGLQKDGVEAHLQKLLADDPTSIADGLRLVRREYPTDIGPVDLMCRDADGMAVAIEVKRRGEIDGVEQLTRYLEFLNRDPMLRPVRGIYVAQEIKPQAKVLASDRDIAWVEVDYDELRGIESPNLKLF 588 L+MVKADGCVAIHADGGAYKPLNWMNAPNR+ E WTV++ KGE LTIT +V+SDS EMG DPGLQKDGVEAHLQ+LLA +P SIADGLRLVRREYPTDIGPVDL+CRDA+G+AVAIEVKRRGEIDGVEQLTRYL+FLNRDPMLRPVRG++VAQEIKPQAKVLA+DRDI WV VDY+ELRGIE+ LKLF Sbjct: 26 LLMVKADGCVAIHADGGAYKPLNWMNAPNRLTEHDDH--WTVSNKKGETLTITLEEVLSDSDFEMGVDPGLQKDGVEAHLQELLAANPESIADGLRLVRREYPTDIGPVDLLCRDAEGIAVAIEVKRRGEIDGVEQLTRYLDFLNRDPMLRPVRGVFVAQEIKPQAKVLATDRDIDWVVVDYNELRGIETDELKLF 219
BLAST of mRNA_M-pyrifera_M_contig89985.20854.1 vs. uniprot
Match: A0A520XR09_9ACTN (Endonuclease NucS n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520XR09_9ACTN) HSP 1 Score: 321 bits (822), Expect = 1.840e-109 Identity = 152/195 (77.95%), Postives = 173/195 (88.72%), Query Frame = 1 Query: 1 LVMVKADGCVAIHADGGAYKPLNWMNAPNRIIEDPGAGVWTVTSPKGEVLTITFHDVISDSSHEMGTDPGLQKDGVEAHLQKLLADDPTSIADGLRLVRREYPTDIGPVDLMCRDADGMAVAIEVKRRGEIDGVEQLTRYLEFLNRDPMLRPVRGIYVAQEIKPQAKVLASDRDIAWVEVDYDELRGIESPNLKL 585 L+MVKADGCVA+HADGGAYKPLNWMN+PNR+IED W VTSPKGE L IT H++ SD SHE+GTDPGLQKDGVEAH+Q+LLA DPT+IADG RLVRREYPT+IGPVDL+CRD D +A+EVKRRGEIDGVEQL+RYLEFLN+DP+L PVRGI+VAQ IKPQAKVLA++RDI VEVDYDELRGIESP L+L Sbjct: 26 LIMVKADGCVAVHADGGAYKPLNWMNSPNRLIED--GAEWRVTSPKGETLIITMHEIFSDISHELGTDPGLQKDGVEAHIQELLAADPTTIADGFRLVRREYPTEIGPVDLLCRDEDDAVIAVEVKRRGEIDGVEQLSRYLEFLNQDPVLNPVRGIFVAQSIKPQAKVLATERDITCVEVDYDELRGIESPQLRL 218
BLAST of mRNA_M-pyrifera_M_contig89985.20854.1 vs. uniprot
Match: A0A2E9W0Q9_9ACTN (Endonuclease NucS n=4 Tax=Actinobacteria TaxID=201174 RepID=A0A2E9W0Q9_9ACTN) HSP 1 Score: 320 bits (821), Expect = 2.620e-109 Identity = 154/196 (78.57%), Postives = 175/196 (89.29%), Query Frame = 1 Query: 1 LVMVKADGCVAIHADGGAYKPLNWMNAPNRIIEDPGAGVWTVTSPKGEVLTITFHDVISDSSHEMGTDPGLQKDGVEAHLQKLLADDPTSIADGLRLVRREYPTDIGPVDLMCRDADGMAVAIEVKRRGEIDGVEQLTRYLEFLNRDPMLRPVRGIYVAQEIKPQAKVLASDRDIAWVEVDYDELRGIESPNLKLF 588 L+MVKADGCVAIHADGGAYKPLNWM APN +IE+ G W+V + KGE+LTIT H+VISD+ +G DPGLQKDGVEAHLQ+LLA DPT +AD LRLVRREYPT +GPVDL+CRDADG+AVAIEVKRRGEIDGVEQLTRYL+FLNRDPMLRPVRG++VAQE+KPQA+VLA DRDI W+EVDYD+LRGIES LKLF Sbjct: 26 LLMVKADGCVAIHADGGAYKPLNWMTAPNTMIEEEGC--WSVRNSKGEILTITLHEVISDTESPLGDDPGLQKDGVEAHLQELLAADPTFMADDLRLVRREYPTAVGPVDLLCRDADGVAVAIEVKRRGEIDGVEQLTRYLDFLNRDPMLRPVRGMFVAQEVKPQARVLAEDRDITWLEVDYDDLRGIESNELKLF 219
BLAST of mRNA_M-pyrifera_M_contig89985.20854.1 vs. uniprot
Match: A0A800LPU8_9ACTN (Endonuclease NucS n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A800LPU8_9ACTN) HSP 1 Score: 320 bits (820), Expect = 3.720e-109 Identity = 154/196 (78.57%), Postives = 174/196 (88.78%), Query Frame = 1 Query: 1 LVMVKADGCVAIHADGGAYKPLNWMNAPNRIIEDPGAGVWTVTSPKGEVLTITFHDVISDSSHEMGTDPGLQKDGVEAHLQKLLADDPTSIADGLRLVRREYPTDIGPVDLMCRDADGMAVAIEVKRRGEIDGVEQLTRYLEFLNRDPMLRPVRGIYVAQEIKPQAKVLASDRDIAWVEVDYDELRGIESPNLKLF 588 L+MVKADGCVAIHADGGA+KPLNWMNAPNR+ E+ G W VT+PK E L IT H+++SD+ H++G DPGLQKDGVEAHLQ+LLA DPT++ADGLRLVRRE+PT+IGPVDL+CRDA+G AVAIEVKRRGEIDGVEQLTRYL+FLNRDP L PVRGIYVAQEIKPQAKVLA DR I WV VDYDELRG+ES LKLF Sbjct: 26 LIMVKADGCVAIHADGGAFKPLNWMNAPNRLTEEDG--FWRVTNPKDETLIITLHEILSDTKHDLGVDPGLQKDGVEAHLQELLAADPTTMADGLRLVRREFPTEIGPVDLLCRDAEGNAVAIEVKRRGEIDGVEQLTRYLDFLNRDPTLAPVRGIYVAQEIKPQAKVLAEDRGIDWVVVDYDELRGMESDVLKLF 219
BLAST of mRNA_M-pyrifera_M_contig89985.20854.1 vs. uniprot
Match: A0A7C7SAC7_9ACTN (Endonuclease NucS n=4 Tax=root TaxID=1 RepID=A0A7C7SAC7_9ACTN) HSP 1 Score: 320 bits (820), Expect = 5.440e-109 Identity = 159/205 (77.56%), Postives = 176/205 (85.85%), Query Frame = 1 Query: 1 LVMVKADGCVAIHADGGAYKPLNWMNAPNRII------EDPGAG---VWTVTSPKGEVLTITFHDVISDSSHEMGTDPGLQKDGVEAHLQKLLADDPTSIADGLRLVRREYPTDIGPVDLMCRDADGMAVAIEVKRRGEIDGVEQLTRYLEFLNRDPMLRPVRGIYVAQEIKPQAKVLASDRDIAWVEVDYDELRGIESPNLKLF 588 L+MVKADGCVAIHADGGAYKPLNWM +PN + ++ GAG VWTV +P GEVLTIT H+V+SD SHEMG DPGLQKDGVEAHLQ LLA DPT++ DGLRLVRREYPTDIGPVDL+CRDADG+AVA+EVKRRGEIDGVEQLTRYL+FLNRDPMLRPVRG++VAQEIKPQA+VLA DR I V VDYDELRGI S LKLF Sbjct: 26 LLMVKADGCVAIHADGGAYKPLNWMTSPNTLAIDGDPDDEDGAGAEAVWTVRNPAGEVLTITLHEVLSDVSHEMGPDPGLQKDGVEAHLQALLAADPTTMGDGLRLVRREYPTDIGPVDLLCRDADGVAVAVEVKRRGEIDGVEQLTRYLDFLNRDPMLRPVRGVFVAQEIKPQARVLAEDRGIGCVVVDYDELRGIRSNELKLF 230 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89985.20854.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig89985.20854.1 >prot_M-pyrifera_M_contig89985.20854.1 ID=prot_M-pyrifera_M_contig89985.20854.1|Name=mRNA_M-pyrifera_M_contig89985.20854.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=195bp MVKADGCVAIHADGGAYKPLNWMNAPNRIIEDPGAGVWTVTSPKGEVLTIback to top mRNA from alignment at M-pyrifera_M_contig89985:206..796- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig89985.20854.1 ID=mRNA_M-pyrifera_M_contig89985.20854.1|Name=mRNA_M-pyrifera_M_contig89985.20854.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=591bp|location=Sequence derived from alignment at M-pyrifera_M_contig89985:206..796- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig89985:206..796- >mRNA_M-pyrifera_M_contig89985.20854.1 ID=mRNA_M-pyrifera_M_contig89985.20854.1|Name=mRNA_M-pyrifera_M_contig89985.20854.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1170bp|location=Sequence derived from alignment at M-pyrifera_M_contig89985:206..796- (Macrocystis pyrifera P11B4 male)back to top |