mRNA_M-pyrifera_M_contig89980.20851.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig89980.20851.1
Unique NamemRNA_M-pyrifera_M_contig89980.20851.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig89980.20851.1 vs. uniprot
Match: A0A2E8LF51_9ACTN (Arginine--tRNA ligase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8LF51_9ACTN)

HSP 1 Score: 422 bits (1086), Expect = 1.340e-143
Identity = 194/265 (73.21%), Postives = 217/265 (81.89%), Query Frame = 1 
Query:    1 PAHVLAVEIAGPGFVNFRLSDTWLHEVLADIAAAGVDGYARPDLGGGLHVNVEFVSANPNKPLHAGHGRGACYGDSIARLRERCGYRVTREYYINDRGVQMTKYAESLAARKRGEEPPADGYQGEYLVDWAAEMPADADPLEWGYERALASHRATLGELRIHHDVWFSEKSMVASGAIEESLADLRAHGAVYEADGATWLRSTEEGDDKDRVLIKSDGDLTYLTPDIAYHRDKFSRSDRLFNVWGADHHGYVPRMKAAMYLLGHD 795
            P HV+ VE+AGPGFVNFRL+DTWLH+VL D+  AG DGYAR D+G G  VNVEFVSANP  PLHAGHGRGACYGDS+ARL ERCG+   RE+YINDRG QM  YA SLAAR  GEEPP  GY G+Y+VDWAAEMPADADPLEWGY RAL++HR  L  L I  D WFSE+SM+ASGAI+ ++ADLR   AVYE DGATWLRST+ GDDKDRVL+K DG+ TYL PD AYHRDKFSR+DRL NVWGADHHGYV RM AAM+ LGHD
Sbjct:   71 PTHVVGVEVAGPGFVNFRLADTWLHDVLRDVVVAGEDGYARHDVGAGERVNVEFVSANPTGPLHAGHGRGACYGDSVARLYERCGHPTEREFYINDRGAQMENYAASLAARAAGEEPPEGGYHGQYVVDWAAEMPADADPLEWGYARALSAHREVLEALHIRFDTWFSERSMIASGAIDATMADLRTADAVYEQDGATWLRSTDHGDDKDRVLVKGDGEYTYLLPDAAYHRDKFSRADRLVNVWGADHHGYVARMHAAMHALGHD 335
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BLAST of mRNA_M-pyrifera_M_contig89980.20851.1 vs. uniprot
Match: A0A2E0T1C9_9ACTN (Arginine--tRNA ligase n=8 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0T1C9_9ACTN)

HSP 1 Score: 418 bits (1075), Expect = 3.990e-142
Identity = 199/265 (75.09%), Postives = 217/265 (81.89%), Query Frame = 1 
Query:    1 PAHVLAVEIAGPGFVNFRLSDTWLHEVLADIAAAGVDGYARPDLGGGLHVNVEFVSANPNKPLHAGHGRGACYGDSIARLRERCGYRVTREYYINDRGVQMTKYAESLAARKRGEEPPADGYQGEYLVDWAAEMPADADPLEWGYERALASHRATLGELRIHHDVWFSEKSMVASGAIEESLADLRAHGAVYEADGATWLRSTEEGDDKDRVLIKSDGDLTYLTPDIAYHRDKFSRSDRLFNVWGADHHGYVPRMKAAMYLLGHD 795
            PAHV AVEIAGPGFVN RL+DTWL EV+ D+   GVDGYA PDLG G H+N EFVSANPNKPLHAGHGRGACYGDSIARL ER G+RVTRE YINDRGVQMT YA SLAA K     P DGY G Y+  WA EMPADADPLEWG +R L SHRATL  L IHH+VWFSE+S+V +GAI++++ DLRA  AV+E DGA WLRSTE GDD DRVL+KSDGDLT LTPDIAYHRDKFSRS+ LFNVWGA HHGYV RMKAAM  LGHD
Sbjct:   72 PAHVTAVEIAGPGFVNXRLADTWLXEVMTDVLEQGVDGYASPDLGAGAHLNXEFVSANPNKPLHAGHGRGACYGDSIARLXERXGFRVTRETYINDRGVQMTNYAXSLAAAKADXPIPEDGYHGAYIHAWAGEMPADADPLEWGLQRGLDSHRATLEALDIHHEVWFSERSLVPTGAIDDAMDDLRAXNAVFEDDGAVWLRSTEFGDDXDRVLVKSDGDLTXLTPDIAYHRDKFSRSELLFNVWGAXHHGYVTRMKAAMQXLGHD 336
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BLAST of mRNA_M-pyrifera_M_contig89980.20851.1 vs. uniprot
Match: A0A351EW68_9ACTN (Arginine--tRNA ligase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A351EW68_9ACTN)

HSP 1 Score: 417 bits (1071), Expect = 1.610e-141
Identity = 191/265 (72.08%), Postives = 222/265 (83.77%), Query Frame = 1 
Query:    1 PAHVLAVEIAGPGFVNFRLSDTWLHEVLADIAAAGVDGYARPDLGGGLHVNVEFVSANPNKPLHAGHGRGACYGDSIARLRERCGYRVTREYYINDRGVQMTKYAESLAARKRGEEPPADGYQGEYLVDWAAEMPADADPLEWGYERALASHRATLGELRIHHDVWFSEKSMVASGAIEESLADLRAHGAVYEADGATWLRSTEEGDDKDRVLIKSDGDLTYLTPDIAYHRDKFSRSDRLFNVWGADHHGYVPRMKAAMYLLGHD 795
            PAHV AVEIAGPGFVNFRL DTWL++VL D  + G D + R   G G H+NVEFVSANPNKPLHAGH RGA YGDS+ARL +  GY+VT E+Y+NDRGVQM+ +AESLAARKRG++ P +GY GEYL+DWAAEMP DADPLEWGY RAL SH+ TL  + +HHDVWFSE+S+VA G +  +LA+L+A G VYEADGATWL++TE GDDKDRVLIK+DGD TYLTPDIAYHRDKFSR+DRL NVWGADHHGY+ RMKAAM  LG+D
Sbjct:   72 PAHVEAVEIAGPGFVNFRLFDTWLYDVLNDAVSTGEDTFGRHAFGSGTHINVEFVSANPNKPLHAGHARGAVYGDSVARLLKAVGYQVTTEFYLNDRGVQMSLFAESLAARKRGDDVPENGYHGEYLIDWAAEMPDDADPLEWGYARALQSHKETLARVSVHHDVWFSERSLVADGQVPNALAELQASGMVYEADGATWLKTTEAGDDKDRVLIKADGDYTYLTPDIAYHRDKFSRADRLINVWGADHHGYIRRMKAAMAFLGND 336
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BLAST of mRNA_M-pyrifera_M_contig89980.20851.1 vs. uniprot
Match: A0A351IW36_9ACTN (Arginine--tRNA ligase n=5 Tax=Acidimicrobiia TaxID=84992 RepID=A0A351IW36_9ACTN)

HSP 1 Score: 411 bits (1057), Expect = 3.190e-139
Identity = 190/265 (71.70%), Postives = 218/265 (82.26%), Query Frame = 1 
Query:    1 PAHVLAVEIAGPGFVNFRLSDTWLHEVLADIAAAGVDGYARPDLGGGLHVNVEFVSANPNKPLHAGHGRGACYGDSIARLRERCGYRVTREYYINDRGVQMTKYAESLAARKRGEEPPADGYQGEYLVDWAAEMPADADPLEWGYERALASHRATLGELRIHHDVWFSEKSMVASGAIEESLADLRAHGAVYEADGATWLRSTEEGDDKDRVLIKSDGDLTYLTPDIAYHRDKFSRSDRLFNVWGADHHGYVPRMKAAMYLLGHD 795
            P HV+ VE+AGPGFVNFRL++TWLHEVLAD+ AAG DG+ R D G G  V VEFVSANP  PLHAGHGRGACYGDS+ARL ERCGY V RE+Y+ND GVQM K+A SLAAR  G E P DGY G+Y+VDWAAEMPA  DPLEWGYERALA HR+ L  + IH D WFSE+SM++SGA++ +LADLRA GAVYE  GA WLRST+ GDDKDRVL+KSDG  TYL PD+AYHRDKF+R+DRL +V+GADHHGYV RM AAM +LGHD
Sbjct:   76 PPHVVGVEVAGPGFVNFRLAETWLHEVLADVVAAGTDGWGRLDSGAGTRVIVEFVSANPTGPLHAGHGRGACYGDSVARLYERCGYEVEREFYVNDSGVQMQKFAASLAARAAGGEVPEDGYHGQYIVDWAAEMPAGVDPLEWGYERALADHRSVLESMSIHFDSWFSERSMISSGAMDATLADLRAAGAVYEEGGAVWLRSTDHGDDKDRVLVKSDGQPTYLMPDVAYHRDKFARADRLVDVFGADHHGYVVRMHAAMSVLGHD 340
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BLAST of mRNA_M-pyrifera_M_contig89980.20851.1 vs. uniprot
Match: A0A2E5P516_9ACTN (Arginine--tRNA ligase n=2 Tax=root TaxID=1 RepID=A0A2E5P516_9ACTN)

HSP 1 Score: 408 bits (1049), Expect = 4.570e-138
Identity = 189/265 (71.32%), Postives = 218/265 (82.26%), Query Frame = 1 
Query:    1 PAHVLAVEIAGPGFVNFRLSDTWLHEVLADIAAAGVDGYARPDLGGGLHVNVEFVSANPNKPLHAGHGRGACYGDSIARLRERCGYRVTREYYINDRGVQMTKYAESLAARKRGEEPPADGYQGEYLVDWAAEMPADADPLEWGYERALASHRATLGELRIHHDVWFSEKSMVASGAIEESLADLRAHGAVYEADGATWLRSTEEGDDKDRVLIKSDGDLTYLTPDIAYHRDKFSRSDRLFNVWGADHHGYVPRMKAAMYLLGHD 795
            P HV+ VE+AGPGFVNFRL+D+WLHEVLAD+  AG DG+ R D G G+ V VEFVSANP  PLHAGHGRGACYGDS+ARL ERCGY+V RE+YINDRG+QM  +A SLAAR  G E   DGY G+Y+VDWAAEMP DADPLEWGY RALA+H++ L  L IH D WFSE+SM+ASGAI+++LADL+  G+VYE DGA WLRS+E GDDKDRVLIK DG+ TYL PD+AYHRDKF R+D L NV+GADHHGYV RM AAM LLGHD
Sbjct:   72 PPHVVGVEVAGPGFVNFRLADSWLHEVLADVVVAGADGWGRHDHGVGVKVIVEFVSANPTGPLHAGHGRGACYGDSVARLYERCGYQVAREFYINDRGIQMQNFAASLAARAGGREVADDGYHGQYIVDWAAEMPIDADPLEWGYARALAAHQSVLESLSIHFDTWFSERSMMASGAIDQTLADLQVAGSVYEEDGAVWLRSSEHGDDKDRVLIKGDGEPTYLMPDVAYHRDKFGRADLLVNVFGADHHGYVARMHAAMALLGHD 336
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BLAST of mRNA_M-pyrifera_M_contig89980.20851.1 vs. uniprot
Match: A0A432JNZ0_9ACTN (Arginine--tRNA ligase n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A432JNZ0_9ACTN)

HSP 1 Score: 407 bits (1045), Expect = 2.020e-137
Identity = 189/265 (71.32%), Postives = 215/265 (81.13%), Query Frame = 1 
Query:    1 PAHVLAVEIAGPGFVNFRLSDTWLHEVLADIAAAGVDGYARPDLGGGLHVNVEFVSANPNKPLHAGHGRGACYGDSIARLRERCGYRVTREYYINDRGVQMTKYAESLAARKRGEEPPADGYQGEYLVDWAAEMPADADPLEWGYERALASHRATLGELRIHHDVWFSEKSMVASGAIEESLADLRAHGAVYEADGATWLRSTEEGDDKDRVLIKSDGDLTYLTPDIAYHRDKFSRSDRLFNVWGADHHGYVPRMKAAMYLLGHD 795
            P HV AVE+AGPGFVNFRLSD+WLH+VL D+  AG D +AR D+G G  V VEFVSANP  PLHAGHGRGAC+GDS+ARL ERCG+ VTRE+YINDRG QM  YA SLAAR  G + P  GY+G Y+ DWAAEMP DADP EWGY+RALAS RA L  L IH D WFSE+SM+ASGAI+ ++ADLR   AVYEADGA WLRS++ GDDKDRVL+KSDG+ TYL PD+AYHRDKFSR+DRL NVWGADHHGYV RM AAM  LGH+
Sbjct:   72 PPHVAAVEVAGPGFVNFRLSDSWLHDVLVDVVVAGTDSWARHDVGAGETVMVEFVSANPTGPLHAGHGRGACFGDSVARLYERCGHEVTREFYINDRGTQMRLYAGSLAARAAGTDVPEGGYRGSYIEDWAAEMPTDADPFEWGYQRALASQRAVLEALDIHFDSWFSERSMIASGAIDVTMADLRDADAVYEADGAVWLRSSDHGDDKDRVLVKSDGEFTYLMPDVAYHRDKFSRADRLVNVWGADHHGYVARMHAAMRALGHE 336
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BLAST of mRNA_M-pyrifera_M_contig89980.20851.1 vs. uniprot
Match: A0A2E5ZFP7_9ACTN (Arginine--tRNA ligase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E5ZFP7_9ACTN)

HSP 1 Score: 407 bits (1045), Expect = 4.960e-137
Identity = 185/265 (69.81%), Postives = 215/265 (81.13%), Query Frame = 1 
Query:    1 PAHVLAVEIAGPGFVNFRLSDTWLHEVLADIAAAGVDGYARPDLGGGLHVNVEFVSANPNKPLHAGHGRGACYGDSIARLRERCGYRVTREYYINDRGVQMTKYAESLAARKRGEEPPADGYQGEYLVDWAAEMPADADPLEWGYERALASHRATLGELRIHHDVWFSEKSMVASGAIEESLADLRAHGAVYEADGATWLRSTEEGDDKDRVLIKSDGDLTYLTPDIAYHRDKFSRSDRLFNVWGADHHGYVPRMKAAMYLLGHD 795
            P H + VE+AGPGFVNFRL+DTWLH+VL  +   G DGYAR D+G G  V VEFVSANP  PLHAGHGRGACYGDS+ARL ERCGY V RE+YINDRG+QM  +A SLAAR  G+E P DGY G+Y+ +WA EMPADADP+EWGY RALA+HR  L +L I  D WFSE+SM+ +GAI+ +LADLRA GAVY+ DGA WLRST+ GDDKDRVL+K DG+ TYL PD+AYHRDKF+R+DRL NV+GADHHGYV RM AAM LLGHD
Sbjct:   72 PPHAVGVEVAGPGFVNFRLADTWLHDVLVQVVEGGEDGYARHDIGAGTSVIVEFVSANPTGPLHAGHGRGACYGDSVARLYERCGYEVVREFYINDRGLQMQNFAASLAARAAGQEVPEDGYHGQYIAEWAGEMPADADPMEWGYARALAAHRTVLEDLSIQFDSWFSERSMIDTGAIDTTLADLRAAGAVYDEDGAVWLRSTDHGDDKDRVLVKGDGEPTYLMPDVAYHRDKFTRADRLVNVFGADHHGYVARMHAAMALLGHD 336
[Close]
BLAST of mRNA_M-pyrifera_M_contig89980.20851.1 vs. uniprot
Match: A0A7X7HRK2_9ACTN (Arginine--tRNA ligase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7X7HRK2_9ACTN)

HSP 1 Score: 404 bits (1037), Expect = 2.050e-136
Identity = 186/265 (70.19%), Postives = 214/265 (80.75%), Query Frame = 1 
Query:    1 PAHVLAVEIAGPGFVNFRLSDTWLHEVLADIAAAGVDGYARPDLGGGLHVNVEFVSANPNKPLHAGHGRGACYGDSIARLRERCGYRVTREYYINDRGVQMTKYAESLAARKRGEEPPADGYQGEYLVDWAAEMPADADPLEWGYERALASHRATLGELRIHHDVWFSEKSMVASGAIEESLADLRAHGAVYEADGATWLRSTEEGDDKDRVLIKSDGDLTYLTPDIAYHRDKFSRSDRLFNVWGADHHGYVPRMKAAMYLLGHD 795
            P HV  VEIAGPGFVNF L+ TWLH+VL+D+   G +G+AR D G G  VNVEFVSANP  P+HAGH RGA YGDS+ARL ERCGY VTRE+YINDRGVQM  +  SLAARK+GEEPP DGY+G+Y+ DWAAEMP DADP+ WG +RALA  R  L    +H DVW+ E ++V SGAIEE+L +LR  G V++ DGATWLRSTE GDDKDRVL+KSDG+LTYL PDIAYHRDKFSR++RL NVWGADHHGYVPRMKAAM  LGHD
Sbjct:   69 PPHVERVEIAGPGFVNFHLAPTWLHDVLSDVVTLGTEGFARSDAGVGHTVNVEFVSANPTGPVHAGHARGAAYGDSVARLLERCGYGVTREFYINDRGVQMQNFGASLAARKKGEEPPEDGYKGQYVTDWAAEMPDDADPVAWGEDRALADQREALAAFNVHFDVWYKELALVDSGAIEETLDELREKGHVFDDDGATWLRSTEFGDDKDRVLVKSDGELTYLAPDIAYHRDKFSRAERLINVWGADHHGYVPRMKAAMQALGHD 333
[Close]
BLAST of mRNA_M-pyrifera_M_contig89980.20851.1 vs. uniprot
Match: A0A2E5NTS7_9ACTN (Arginine--tRNA ligase n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E5NTS7_9ACTN)

HSP 1 Score: 404 bits (1037), Expect = 4.080e-136
Identity = 187/265 (70.57%), Postives = 217/265 (81.89%), Query Frame = 1 
Query:    1 PAHVLAVEIAGPGFVNFRLSDTWLHEVLADIAAAGVDGYARPDLGGGLHVNVEFVSANPNKPLHAGHGRGACYGDSIARLRERCGYRVTREYYINDRGVQMTKYAESLAARKRGEEPPADGYQGEYLVDWAAEMPADADPLEWGYERALASHRATLGELRIHHDVWFSEKSMVASGAIEESLADLRAHGAVYEADGATWLRSTEEGDDKDRVLIKSDGDLTYLTPDIAYHRDKFSRSDRLFNVWGADHHGYVPRMKAAMYLLGHD 795
            PAHV+ VE+AGPGFVNF L+D+WLHEVL ++  AG D YAR +LG G  V VEFVSANP  PLHAGHGRGACYGDS+ARL ERCGY V RE+YINDRG+QM  +A+SLAA   G+E P DGY G+Y+VDWAAEMPA ADPLEWGY RAL +HR  L +L IH D WFSE+SM+A+GAI+++LADLR  GAVY+ DGA WLRS+E GDDKDRVL+K DG  TYL PD+AYHRDKF R+DRL NV+GADHHGYV RM AAM LLG+D
Sbjct:   72 PAHVVGVEVAGPGFVNFHLADSWLHEVLTEVVDAGEDVYARHELGVGTRVIVEFVSANPTGPLHAGHGRGACYGDSVARLYERCGYDVVREFYINDRGLQMQNFADSLAALAAGDEVPEDGYHGQYVVDWAAEMPAGADPLEWGYSRALGAHREVLEDLSIHFDSWFSERSMIATGAIDDTLADLRGVGAVYDHDGAVWLRSSEHGDDKDRVLVKGDGQPTYLMPDVAYHRDKFGRADRLVNVFGADHHGYVARMHAAMALLGYD 336
[Close]
BLAST of mRNA_M-pyrifera_M_contig89980.20851.1 vs. uniprot
Match: A0A2E2X0K4_9ACTN (Arginine--tRNA ligase n=3 Tax=root TaxID=1 RepID=A0A2E2X0K4_9ACTN)

HSP 1 Score: 402 bits (1033), Expect = 1.360e-135
Identity = 187/265 (70.57%), Postives = 211/265 (79.62%), Query Frame = 1 
Query:    1 PAHVLAVEIAGPGFVNFRLSDTWLHEVLADIAAAGVDGYARPDLGGGLHVNVEFVSANPNKPLHAGHGRGACYGDSIARLRERCGYRVTREYYINDRGVQMTKYAESLAARKRGEEPPADGYQGEYLVDWAAEMPADADPLEWGYERALASHRATLGELRIHHDVWFSEKSMVASGAIEESLADLRAHGAVYEADGATWLRSTEEGDDKDRVLIKSDGDLTYLTPDIAYHRDKFSRSDRLFNVWGADHHGYVPRMKAAMYLLGHD 795
            P HV+ V++AGPGFVNFRL+D+WLHEVL D+  AG DG+ R D G G  V VEFVSANP  PLHAGHG GACYGDS+ARL ERCGY V RE+Y+NDRGVQM  +A SLAAR  G E   DGY G Y+VDWAAEMP DADPLEWGY RALA+HR+ L  L IH D WFSE+SM+ASGA++ +L DLRA GAVYE DGA WLRS++ GDDKDRVL K DG  TYL PD+AYHRDKF R+DRL NV+GADHHGYV RM AAM LLGHD
Sbjct:   72 PPHVIGVDVAGPGFVNFRLADSWLHEVLVDVVDAGTDGWGRLDSGVGTSVIVEFVSANPTGPLHAGHGXGACYGDSVARLYERCGYXVVREFYVNDRGVQMQNFAASLAARAAGTEVGEDGYHGRYIVDWAAEMPXDADPLEWGYARALAAHRSVLESLSIHFDSWFSERSMIASGAVDATLVDLRAAGAVYEEDGAVWLRSSDHGDDKDRVLXKGDGQPTYLMPDVAYHRDKFGRADRLVNVFGADHHGYVARMHAAMALLGHD 336
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89980.20851.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E8LF51_9ACTN1.340e-14373.21Arginine--tRNA ligase n=2 Tax=Acidimicrobiaceae ba... [more]
A0A2E0T1C9_9ACTN3.990e-14275.09Arginine--tRNA ligase n=8 Tax=Acidimicrobiaceae ba... [more]
A0A351EW68_9ACTN1.610e-14172.08Arginine--tRNA ligase n=1 Tax=Acidimicrobiaceae ba... [more]
A0A351IW36_9ACTN3.190e-13971.70Arginine--tRNA ligase n=5 Tax=Acidimicrobiia TaxID... [more]
A0A2E5P516_9ACTN4.570e-13871.32Arginine--tRNA ligase n=2 Tax=root TaxID=1 RepID=A... [more]
A0A432JNZ0_9ACTN2.020e-13771.32Arginine--tRNA ligase n=2 Tax=Actinobacteria TaxID... [more]
A0A2E5ZFP7_9ACTN4.960e-13769.81Arginine--tRNA ligase n=2 Tax=Acidimicrobiaceae ba... [more]
A0A7X7HRK2_9ACTN2.050e-13670.19Arginine--tRNA ligase n=1 Tax=Acidimicrobiales bac... [more]
A0A2E5NTS7_9ACTN4.080e-13670.57Arginine--tRNA ligase n=5 Tax=Acidimicrobiaceae ba... [more]
A0A2E2X0K4_9ACTN1.360e-13570.57Arginine--tRNA ligase n=3 Tax=root TaxID=1 RepID=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89980contigM-pyrifera_M_contig89980:3..797 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score279.6
Seed ortholog evalue1.5e-72
Seed eggNOG ortholog1118054.CAGW01000043_gene1092
Preferred nameargS
KEGG rclassRC00055,RC00523
KEGG koko:K01887
KEGG ReactionR03646
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.Catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
EggNOG OGs1TPEZ@1239,26R9D@186822,4HAR3@91061,COG0018@1,COG0018@2
EC6.1.1.19
COG Functional cat.J
BiGG ReactioniAF987.Gmet_1434
Best tax levelPaenibacillaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029
Exons1
Model size795
Cds size795
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816810.3740327-CDS-M-pyrifera_M_contig89980:2..7971622816810.3740327-CDS-M-pyrifera_M_contig89980:2..797Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89980 3..797 +
1692278191.9338243-CDS-M-pyrifera_M_contig89980:2..7971692278191.9338243-CDS-M-pyrifera_M_contig89980:2..797Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89980 3..797 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89980.20851.1prot_M-pyrifera_M_contig89980.20851.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig89980 3..797 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig89980.20851.1

>prot_M-pyrifera_M_contig89980.20851.1 ID=prot_M-pyrifera_M_contig89980.20851.1|Name=mRNA_M-pyrifera_M_contig89980.20851.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=265bp
PAHVLAVEIAGPGFVNFRLSDTWLHEVLADIAAAGVDGYARPDLGGGLHV
NVEFVSANPNKPLHAGHGRGACYGDSIARLRERCGYRVTREYYINDRGVQ
MTKYAESLAARKRGEEPPADGYQGEYLVDWAAEMPADADPLEWGYERALA
SHRATLGELRIHHDVWFSEKSMVASGAIEESLADLRAHGAVYEADGATWL
RSTEEGDDKDRVLIKSDGDLTYLTPDIAYHRDKFSRSDRLFNVWGADHHG
YVPRMKAAMYLLGHD
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mRNA from alignment at M-pyrifera_M_contig89980:3..797+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig89980.20851.1 ID=mRNA_M-pyrifera_M_contig89980.20851.1|Name=mRNA_M-pyrifera_M_contig89980.20851.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=795bp|location=Sequence derived from alignment at M-pyrifera_M_contig89980:3..797+ (Macrocystis pyrifera P11B4 male)
CCGGCCCACGTCCTGGCCGTCGAGATCGCCGGACCGGGATTCGTCAACTT
CCGGCTGAGTGACACCTGGCTCCACGAGGTGCTGGCCGACATCGCGGCCG
CCGGCGTCGACGGCTACGCCCGTCCCGACCTGGGTGGAGGACTCCACGTC
AACGTCGAGTTCGTCTCGGCCAATCCGAACAAGCCCCTCCACGCCGGCCA
CGGGCGCGGCGCCTGCTACGGCGACTCGATCGCCAGGCTCCGCGAACGCT
GCGGCTATCGGGTCACCCGTGAGTACTACATCAATGATCGCGGCGTGCAG
ATGACGAAGTACGCGGAATCGCTCGCCGCTCGAAAGCGAGGCGAGGAGCC
GCCTGCCGACGGCTACCAGGGCGAGTATCTCGTCGACTGGGCCGCCGAGA
TGCCGGCCGATGCCGATCCGCTCGAGTGGGGCTACGAGCGCGCGCTCGCC
AGCCATCGCGCCACCCTCGGCGAACTCCGGATTCACCACGACGTCTGGTT
CAGCGAGAAGTCGATGGTCGCATCGGGGGCGATCGAAGAGAGCCTAGCCG
ACCTTCGCGCCCACGGCGCGGTCTACGAGGCCGACGGCGCCACGTGGTTG
CGCAGCACCGAGGAGGGCGACGACAAGGACCGGGTCCTGATCAAGAGCGA
CGGTGACCTCACCTATCTCACCCCCGACATCGCCTATCACCGCGACAAGT
TCAGCCGATCCGATCGGCTGTTCAACGTGTGGGGCGCCGACCACCACGGC
TATGTGCCGCGGATGAAGGCGGCGATGTACCTCCTCGGCCACGAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig89980:3..797+

>mRNA_M-pyrifera_M_contig89980.20851.1 ID=mRNA_M-pyrifera_M_contig89980.20851.1|Name=mRNA_M-pyrifera_M_contig89980.20851.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1590bp|location=Sequence derived from alignment at M-pyrifera_M_contig89980:3..797+ (Macrocystis pyrifera P11B4 male)
CCGGCCCACGTCCTGGCCGTCGAGATCGCCGGACCGGGATTCGTCAACTT
CCGGCTGAGTGACACCTGGCTCCACGAGGTGCTGGCCGACATCGCGGCCG
CCGGCGTCGACGGCTACGCCCGTCCCGACCTGGGTGGAGGACTCCACGTC
AACGTCGAGTTCGTCTCGGCCAATCCGAACAAGCCCCTCCACGCCGGCCA
CGGGCGCGGCGCCTGCTACGGCGACTCGATCGCCAGGCTCCGCGAACGCT
GCGGCTATCGGGTCACCCGTGAGTACTACATCAATGATCGCGGCGTGCAG
ATGACGAAGTACGCGGAATCGCTCGCCGCTCGAAAGCGAGGCGAGGAGCC
GCCTGCCGACGGCTACCAGGGCGAGTATCTCGTCGACTGGGCCGCCGAGA
TGCCGGCCGATGCCGATCCGCTCGAGTGGGGCTACGAGCGCGCGCTCGCC
AGCCATCGCGCCACCCTCGGCGAACTCCGGATTCACCACGACGTCTGGTT
CAGCGAGAAGTCGATGGTCGCATCGGGGGCGATCGAAGAGAGCCTAGCCG
ACCTTCGCGCCCACGGCGCGGTCTACGAGGCCGACGGCGCCACGTGGTTG
CGCAGCACCGAGGAGGGCGACGACAAGGACCGGGTCCTGATCAAGAGCGA
CGGTGACCTCACCTATCTCACCCCCGACATCGCCTATCACCGCGACAAGT
TCAGCCGATCCGATCGGCTGTTCAACGTGTGGGGCGCCGACCACCACGGC
TATGTGCCGCGGATGAAGGCGGCGATGTACCTCCTCGGCCACGACCCGGC
CCACGTCCTGGCCGTCGAGATCGCCGGACCGGGATTCGTCAACTTCCGGC
TGAGTGACACCTGGCTCCACGAGGTGCTGGCCGACATCGCGGCCGCCGGC
GTCGACGGCTACGCCCGTCCCGACCTGGGTGGAGGACTCCACGTCAACGT
CGAGTTCGTCTCGGCCAATCCGAACAAGCCCCTCCACGCCGGCCACGGGC
GCGGCGCCTGCTACGGCGACTCGATCGCCAGGCTCCGCGAACGCTGCGGC
TATCGGGTCACCCGTGAGTACTACATCAATGATCGCGGCGTGCAGATGAC
GAAGTACGCGGAATCGCTCGCCGCTCGAAAGCGAGGCGAGGAGCCGCCTG
CCGACGGCTACCAGGGCGAGTATCTCGTCGACTGGGCCGCCGAGATGCCG
GCCGATGCCGATCCGCTCGAGTGGGGCTACGAGCGCGCGCTCGCCAGCCA
TCGCGCCACCCTCGGCGAACTCCGGATTCACCACGACGTCTGGTTCAGCG
AGAAGTCGATGGTCGCATCGGGGGCGATCGAAGAGAGCCTAGCCGACCTT
CGCGCCCACGGCGCGGTCTACGAGGCCGACGGCGCCACGTGGTTGCGCAG
CACCGAGGAGGGCGACGACAAGGACCGGGTCCTGATCAAGAGCGACGGTG
ACCTCACCTATCTCACCCCCGACATCGCCTATCACCGCGACAAGTTCAGC
CGATCCGATCGGCTGTTCAACGTGTGGGGCGCCGACCACCACGGCTATGT
GCCGCGGATGAAGGCGGCGATGTACCTCCTCGGCCACGAC
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