mRNA_M-pyrifera_M_contig89915.20842.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig89915.20842.1
Unique NamemRNA_M-pyrifera_M_contig89915.20842.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig89915.20842.1 vs. uniprot
Match: A0A2E2HAI6_9GAMM (Restriction endonuclease n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E2HAI6_9GAMM)

HSP 1 Score: 484 bits (1245), Expect = 1.590e-164
Identity = 237/266 (89.10%), Postives = 250/266 (93.98%), Query Frame = 1
Query:    1 RGNLSSRNKKKKKFADYVLQWEAGVPIAIVEAKDNNHTVSHGMQQALGYADILHVPSAFSSNGDAFASHNKIPLAGEEIETELPLESFPGPAELWQRYKTYRDIHDDEEELVTEPYQDDGSGKEPRYYQVEAINRVIEAVARGRKRLLLVMATGTGKTYTTFQIIWRLWKAKKAKRILFLVDRNILADQTLVNDFKPFGSVMTKIRNRKIDPSYEIYLGLYQALTGPNEEDKIFKNVSADFFDLIVIDECHRGSAAEDSAWREILD 798
            RGN+SSRNKKKKKFADYVLQWE GVPIAIVEAKDNNHTVSHGMQQALGYADIL VPSAFSSNGDAFASHNK+P  GEEIE+E PLESFP P ELWQRYK YR+I DDEEELV EPY +DGSGK PRYYQ EAINR +EAVA+G+KRLLLVMATGTGKTYTTFQIIWRLWKAK AKRILFLVDRNILADQTLVNDFKPFGSVMTKI+NRKIDPSYEIYLGLYQALTGP+EEDKIF+NVS DFFDLIVIDECHRGSAA+DSAWREIL+
Sbjct:   48 RGNMSSRNKKKKKFADYVLQWETGVPIAIVEAKDNNHTVSHGMQQALGYADILQVPSAFSSNGDAFASHNKVPRKGEEIESEFPLESFPTPQELWQRYKLYRNIEDDEEELVLEPYFEDGSGKAPRYYQTEAINRTVEAVAKGQKRLLLVMATGTGKTYTTFQIIWRLWKAKVAKRILFLVDRNILADQTLVNDFKPFGSVMTKIKNRKIDPSYEIYLGLYQALTGPDEEDKIFRNVSPDFFDLIVIDECHRGSAADDSAWREILE 313          
BLAST of mRNA_M-pyrifera_M_contig89915.20842.1 vs. uniprot
Match: A0A7D9D1L4_9GAMM (Type I restriction enzyme EcoAI R protein n=1 Tax=uncultured Woeseiaceae bacterium TaxID=1983305 RepID=A0A7D9D1L4_9GAMM)

HSP 1 Score: 482 bits (1241), Expect = 6.200e-164
Identity = 238/266 (89.47%), Postives = 249/266 (93.61%), Query Frame = 1
Query:    1 RGNLSSRNKKKKKFADYVLQWEAGVPIAIVEAKDNNHTVSHGMQQALGYADILHVPSAFSSNGDAFASHNKIPLAGEEIETELPLESFPGPAELWQRYKTYRDIHDDEEELVTEPYQDDGSGKEPRYYQVEAINRVIEAVARGRKRLLLVMATGTGKTYTTFQIIWRLWKAKKAKRILFLVDRNILADQTLVNDFKPFGSVMTKIRNRKIDPSYEIYLGLYQALTGPNEEDKIFKNVSADFFDLIVIDECHRGSAAEDSAWREILD 798
            RGNLS+RNKKKKKFADYVLQWEAG+PIA+VEAKDNNHTVSHGMQQALGYADIL VPS FSSNGDAFASHNK P  GE+IE E PL+SFP P ELWQRYK  R+I D EEELV EPYQ DGSGKEPRYYQVEAINRVIEAVA+G+KRLLLVMATGTGKTYTTFQIIWRLWKAKKAKR LFLVDRNILADQTLVNDFKPFGSVMTKI+NRKIDPSYEIYLGLYQALTGP+EEDKIFKNVS DFFDLIVIDECHRGSAA+DSAWREILD
Sbjct:   48 RGNLSARNKKKKKFADYVLQWEAGLPIAVVEAKDNNHTVSHGMQQALGYADILQVPSVFSSNGDAFASHNKEPKQGEDIECEFPLDSFPSPDELWQRYKINRNIEDSEEELVVEPYQVDGSGKEPRYYQVEAINRVIEAVAKGKKRLLLVMATGTGKTYTTFQIIWRLWKAKKAKRTLFLVDRNILADQTLVNDFKPFGSVMTKIKNRKIDPSYEIYLGLYQALTGPDEEDKIFKNVSRDFFDLIVIDECHRGSAADDSAWREILD 313          
BLAST of mRNA_M-pyrifera_M_contig89915.20842.1 vs. uniprot
Match: UPI00112156DC (DEAD/DEAH box helicase family protein n=1 Tax=Vibrio parahaemolyticus TaxID=670 RepID=UPI00112156DC)

HSP 1 Score: 472 bits (1215), Expect = 5.760e-160
Identity = 229/266 (86.09%), Postives = 250/266 (93.98%), Query Frame = 1
Query:    1 RGNLSSRNKKKKKFADYVLQWEAGVPIAIVEAKDNNHTVSHGMQQALGYADILHVPSAFSSNGDAFASHNKIPLAGEEIETELPLESFPGPAELWQRYKTYRDIHDDEEELVTEPYQDDGSGKEPRYYQVEAINRVIEAVARGRKRLLLVMATGTGKTYTTFQIIWRLWKAKKAKRILFLVDRNILADQTLVNDFKPFGSVMTKIRNRKIDPSYEIYLGLYQALTGPNEEDKIFKNVSADFFDLIVIDECHRGSAAEDSAWREILD 798
            RGNLSSRNKKKKKFADYVLQWE GVP+A+VEAK+NN++VSHGMQQALGYA+IL VPSAFSSNGDAFAS NK+P AGE+IE E P+E+FP P ELW+RYKTYR+I DDEEELV EPY +DGSGK PRYYQ EAINR +EAVA+G+KRLLLVMATGTGKTYTTFQII+RLWKAKKAKRILFLVDRNILADQTLVNDFKPFGSVMTKI+NRKIDPSYE+YLGLYQALTGP EEDKIFKNVS +FFDLIVIDECHRGSAA+DSAWREILD
Sbjct:   48 RGNLSSRNKKKKKFADYVLQWEKGVPVAVVEAKENNYSVSHGMQQALGYAEILDVPSAFSSNGDAFASSNKVPQAGEDIECEFPMEAFPSPQELWKRYKTYRNIEDDEEELVLEPYYEDGSGKSPRYYQTEAINRTVEAVAKGQKRLLLVMATGTGKTYTTFQIIYRLWKAKKAKRILFLVDRNILADQTLVNDFKPFGSVMTKIKNRKIDPSYEVYLGLYQALTGPYEEDKIFKNVSPEFFDLIVIDECHRGSAADDSAWREILD 313          
BLAST of mRNA_M-pyrifera_M_contig89915.20842.1 vs. uniprot
Match: A0A0F7M414_9GAMM (Helicase, type I site-specific restriction-modification system restriction subunit n=1 Tax=Spongiibacter sp. IMCC21906 TaxID=1620392 RepID=A0A0F7M414_9GAMM)

HSP 1 Score: 469 bits (1208), Expect = 5.490e-159
Identity = 229/266 (86.09%), Postives = 245/266 (92.11%), Query Frame = 1
Query:    1 RGNLSSRNKKKKKFADYVLQWEAGVPIAIVEAKDNNHTVSHGMQQALGYADILHVPSAFSSNGDAFASHNKIPLAGEEIETELPLESFPGPAELWQRYKTYRDIHDDEEELVTEPYQDDGSGKEPRYYQVEAINRVIEAVARGRKRLLLVMATGTGKTYTTFQIIWRLWKAKKAKRILFLVDRNILADQTLVNDFKPFGSVMTKIRNRKIDPSYEIYLGLYQALTGPNEEDKIFKNVSADFFDLIVIDECHRGSAAEDSAWREILD 798
            RGN+SSRN KKKKFADYVLQW+AGVP+A+VEAK+N  TVSHGMQQALGYADIL VPSAFSSNGDAFA HNK+P AGE+IE E PLE+FP P ELW RYK YR+I +DEEELV EPY DDG GK PRYYQ EAINR +EAVA+G+KRLLLVMATGTGKTYTTFQIIWRLWKAKKAKRILFLVDRNILADQTLVNDFKPFGSVMTKI+NRKIDPSYEIYLGLYQALTGP EEDKIF+NVS DFFDLIVIDECHRGSAA+DSAWREILD
Sbjct:   48 RGNMSSRNTKKKKFADYVLQWKAGVPVAVVEAKENTKTVSHGMQQALGYADILQVPSAFSSNGDAFAGHNKVPAAGEDIEHEFPLEAFPSPQELWNRYKAYRNITEDEEELVLEPYFDDGLGKSPRYYQSEAINRTVEAVAKGQKRLLLVMATGTGKTYTTFQIIWRLWKAKKAKRILFLVDRNILADQTLVNDFKPFGSVMTKIKNRKIDPSYEIYLGLYQALTGPAEEDKIFRNVSRDFFDLIVIDECHRGSAADDSAWREILD 313          
BLAST of mRNA_M-pyrifera_M_contig89915.20842.1 vs. uniprot
Match: A0A559QNA7_9ALTE (Type I restriction enzyme R subunit n=1 Tax=Alteromonadaceae bacterium 2753L.S.0a.02 TaxID=1403320 RepID=A0A559QNA7_9ALTE)

HSP 1 Score: 469 bits (1208), Expect = 6.530e-159
Identity = 231/266 (86.84%), Postives = 246/266 (92.48%), Query Frame = 1
Query:    1 RGNLSSRNKKKKKFADYVLQWEAGVPIAIVEAKDNNHTVSHGMQQALGYADILHVPSAFSSNGDAFASHNKIPLAGEEIETELPLESFPGPAELWQRYKTYRDIHDDEEELVTEPYQDDGSGKEPRYYQVEAINRVIEAVARGRKRLLLVMATGTGKTYTTFQIIWRLWKAKKAKRILFLVDRNILADQTLVNDFKPFGSVMTKIRNRKIDPSYEIYLGLYQALTGPNEEDKIFKNVSADFFDLIVIDECHRGSAAEDSAWREILD 798
            RGNLSSRNKKKKKFADYVLQ E GVPIA+VEAKDNNHTVS GMQQALGYADIL VPS FSSNGDAF+SHNK+P  GEEIETE PLESFP P ELW RYKT+R I DDEEELV EPY DDGSGKEPRYYQ EAINRV+E VA+G+KRLLLVMATGTGKTYTTFQII+RLWKAKKAKRILFLVDRNILADQTL NDFKPFG VMTKI+NRKIDPSYEIYLGLYQA+TGP+EEDKIFKNV++DFFDLIVIDECHRGSA +DSAWREIL+
Sbjct:   48 RGNLSSRNKKKKKFADYVLQREKGVPIAVVEAKDNNHTVSAGMQQALGYADILEVPSTFSSNGDAFSSHNKVPRPGEEIETEFPLESFPSPDELWVRYKTFRGIEDDEEELVEEPYHDDGSGKEPRYYQAEAINRVVERVAKGQKRLLLVMATGTGKTYTTFQIIYRLWKAKKAKRILFLVDRNILADQTLTNDFKPFGPVMTKIKNRKIDPSYEIYLGLYQAMTGPDEEDKIFKNVTSDFFDLIVIDECHRGSAKDDSAWREILE 313          
BLAST of mRNA_M-pyrifera_M_contig89915.20842.1 vs. uniprot
Match: UPI00177ED176 (DEAD/DEAH box helicase family protein n=1 Tax=Pelagicoccus enzymogenes TaxID=2773457 RepID=UPI00177ED176)

HSP 1 Score: 468 bits (1205), Expect = 1.690e-158
Identity = 227/266 (85.34%), Postives = 248/266 (93.23%), Query Frame = 1
Query:    1 RGNLSSRNKKKKKFADYVLQWEAGVPIAIVEAKDNNHTVSHGMQQALGYADILHVPSAFSSNGDAFASHNKIPLAGEEIETELPLESFPGPAELWQRYKTYRDIHDDEEELVTEPYQDDGSGKEPRYYQVEAINRVIEAVARGRKRLLLVMATGTGKTYTTFQIIWRLWKAKKAKRILFLVDRNILADQTLVNDFKPFGSVMTKIRNRKIDPSYEIYLGLYQALTGPNEEDKIFKNVSADFFDLIVIDECHRGSAAEDSAWREILD 798
            RGNLSSRNKKKKKFADYVLQWE GVPIAIVEAKDNNH+VSHGMQQALGY +IL +PSAFSSNGDAFASHNK+P  GE+IE E PL+SFP P ELW+RYK +R+I DDEE LV EPY +DGSGK PRYYQ EAINR IEAVA+G++RLLLVMATGTGKTYTTFQIIWRLWK+K+AKRILFLVDRNILADQTLVNDFKPFGSVMTKI+NRKIDP+YE+YLGLYQALTGP+EEDKIFK+VS DFFDLIVIDECHRGSA+EDSAWREILD
Sbjct:   48 RGNLSSRNKKKKKFADYVLQWETGVPIAIVEAKDNNHSVSHGMQQALGYTEILDLPSAFSSNGDAFASHNKVPEDGEDIECEFPLDSFPPPQELWKRYKKHRNIEDDEEALVLEPYYEDGSGKSPRYYQAEAINRTIEAVAKGQRRLLLVMATGTGKTYTTFQIIWRLWKSKQAKRILFLVDRNILADQTLVNDFKPFGSVMTKIKNRKIDPAYEVYLGLYQALTGPDEEDKIFKSVSRDFFDLIVIDECHRGSASEDSAWREILD 313          
BLAST of mRNA_M-pyrifera_M_contig89915.20842.1 vs. uniprot
Match: UPI001E44B56E (DEAD/DEAH box helicase family protein n=1 Tax=Rheinheimera aquimaris TaxID=412437 RepID=UPI001E44B56E)

HSP 1 Score: 459 bits (1181), Expect = 6.760e-155
Identity = 221/265 (83.40%), Postives = 244/265 (92.08%), Query Frame = 1
Query:    1 RGNLSSRNKKKKKFADYVLQWEAGVPIAIVEAKDNNHTVSHGMQQALGYADILHVPSAFSSNGDAFASHNKIPLAGEEIETELPLESFPGPAELWQRYKTYRDIHDDEEELVTEPYQDDGSGKEPRYYQVEAINRVIEAVARGRKRLLLVMATGTGKTYTTFQIIWRLWKAKKAKRILFLVDRNILADQTLVNDFKPFGSVMTKIRNRKIDPSYEIYLGLYQALTGPNEEDKIFKNVSADFFDLIVIDECHRGSAAEDSAWREIL 795
            RGNLSSRNKKKKKFADYVLQ E GVP+A++EAK+NN+++SHG+QQALGYADIL VP AFSSNGD FASHNK+P+AGE+IETE  +++FP P  LWQRYKT+R I D +EEL+TEPY DDG+GKEPRYYQ EAINRVIE +A+G KRLLLVMATGTGKTYTTFQIIWRLWKAKKAKRILFLVDRNILADQTLVNDFKPFGSVMTKI+NRKIDPSYEIYLGLYQALTGP EEDKIFK VS DFFDLIVIDECHRGSA +DSAW+EIL
Sbjct:   48 RGNLSSRNKKKKKFADYVLQIEKGVPVAVIEAKENNYSISHGLQQALGYADILEVPCAFSSNGDGFASHNKVPVAGEDIETEFSMDNFPSPEVLWQRYKTFRGIEDAQEELITEPYYDDGTGKEPRYYQAEAINRVIEKIAQGEKRLLLVMATGTGKTYTTFQIIWRLWKAKKAKRILFLVDRNILADQTLVNDFKPFGSVMTKIKNRKIDPSYEIYLGLYQALTGPYEEDKIFKTVSPDFFDLIVIDECHRGSANDDSAWKEIL 312          
BLAST of mRNA_M-pyrifera_M_contig89915.20842.1 vs. uniprot
Match: A0A1G0F3F1_9GAMM (Restriction endonuclease n=1 Tax=Gammaproteobacteria bacterium RBG_16_57_12 TaxID=1798266 RepID=A0A1G0F3F1_9GAMM)

HSP 1 Score: 457 bits (1177), Expect = 2.860e-154
Identity = 221/266 (83.08%), Postives = 241/266 (90.60%), Query Frame = 1
Query:    1 RGNLSSRNKKKKKFADYVLQWEAGVPIAIVEAKDNNHTVSHGMQQALGYADILHVPSAFSSNGDAFASHNKIPLAGEEIETELPLESFPGPAELWQRYKTYRDIHDDEEELVTEPYQDDGSGKEPRYYQVEAINRVIEAVARGRKRLLLVMATGTGKTYTTFQIIWRLWKAKKAKRILFLVDRNILADQTLVNDFKPFGSVMTKIRNRKIDPSYEIYLGLYQALTGPNEEDKIFKNVSADFFDLIVIDECHRGSAAEDSAWREILD 798
            RGN+SSRNKKKKKFADYVL WE GVPIA+VEAKDNNHTVSHG+QQALGYA+IL VPSAFSSNGDAFASHNK P AGE+IETE PLE FP P ELW+RYKT+R I D  E+LV +PY +D SGKEPRYYQVEAINR IEAVA G++R+LLVMATGTGKTYTTFQIIWRLWKA   KR+LFL DRNIL DQTLVNDFKPFGSVMTKI+NRKIDPSYEIYLGLYQA+TGP+E DKIFKNVS DFFD++VIDECHRGSAA+DSAWREILD
Sbjct:   48 RGNMSSRNKKKKKFADYVLSWEPGVPIAVVEAKDNNHTVSHGIQQALGYAEILEVPSAFSSNGDAFASHNKAPAAGEDIETEFPLEYFPPPQELWKRYKTFRGIEDKAEKLVIQPYHEDTSGKEPRYYQVEAINRTIEAVASGKRRVLLVMATGTGKTYTTFQIIWRLWKAGVVKRVLFLADRNILVDQTLVNDFKPFGSVMTKIKNRKIDPSYEIYLGLYQAITGPDEADKIFKNVSRDFFDMVVIDECHRGSAADDSAWREILD 313          
BLAST of mRNA_M-pyrifera_M_contig89915.20842.1 vs. uniprot
Match: A0A556QP87_9BACT (DEAD/DEAH box helicase n=1 Tax=Rariglobus hedericola TaxID=2597822 RepID=A0A556QP87_9BACT)

HSP 1 Score: 456 bits (1174), Expect = 7.870e-154
Identity = 225/266 (84.59%), Postives = 243/266 (91.35%), Query Frame = 1
Query:    1 RGNLSSRNKKKKKFADYVLQWEAGVPIAIVEAKDNNHTVSHGMQQALGYADILHVPSAFSSNGDAFASHNKIPLAGEEIETELPLESFPGPAELWQRYKTYRDIHDDEEELVTEPYQDDGSGKEPRYYQVEAINRVIEAVARGRKRLLLVMATGTGKTYTTFQIIWRLWKAKKAKRILFLVDRNILADQTLVNDFKPFGSVMTKIRNRKIDPSYEIYLGLYQALTGPNEEDKIFKNVSADFFDLIVIDECHRGSAAEDSAWREILD 798
            RGN+SSRNKKKKKFADYVL  E GVPIAIVEAK+NN+TVSHG+QQALGYA IL+VPSAFSSNGDAFASHNK+P AGE+IE E PL SFP P ELW+RYK +R+I D EEELV EPY  D  GKEPRYYQ EAINR +E +A+G+KRLLLVMATGTGKTYTTFQIIWRLWKAKKAKR LFLVDRNILADQTLVNDFKPFGSVMTKI+NRKIDPSYEIYLGLYQALTGP+EEDKIFKNVS DFFDLI+IDECHRGSAA+DSAWREILD
Sbjct:   48 RGNMSSRNKKKKKFADYVLLKETGVPIAIVEAKENNYTVSHGLQQALGYAGILNVPSAFSSNGDAFASHNKVPAAGEDIECEFPLPSFPSPDELWKRYKKHRNIKDAEEELVLEPYHLDAYGKEPRYYQSEAINRTLEEIAKGKKRLLLVMATGTGKTYTTFQIIWRLWKAKKAKRTLFLVDRNILADQTLVNDFKPFGSVMTKIKNRKIDPSYEIYLGLYQALTGPDEEDKIFKNVSRDFFDLIIIDECHRGSAADDSAWREILD 313          
BLAST of mRNA_M-pyrifera_M_contig89915.20842.1 vs. uniprot
Match: UPI0003B6CA49 (DEAD/DEAH box helicase family protein n=1 Tax=Spongiibacter tropicus TaxID=454602 RepID=UPI0003B6CA49)

HSP 1 Score: 456 bits (1174), Expect = 8.330e-154
Identity = 224/266 (84.21%), Postives = 245/266 (92.11%), Query Frame = 1
Query:    1 RGNLSSRNKKKKKFADYVLQWEAGVPIAIVEAKDNNHTVSHGMQQALGYADILHVPSAFSSNGDAFASHNKIPLAGEEIETELPLESFPGPAELWQRYKTYRDIHDDEEELVTEPYQDDGSGKEPRYYQVEAINRVIEAVARGRKRLLLVMATGTGKTYTTFQIIWRLWKAKKAKRILFLVDRNILADQTLVNDFKPFGSVMTKIRNRKIDPSYEIYLGLYQALTGPNEEDKIFKNVSADFFDLIVIDECHRGSAAEDSAWREILD 798
            RGNLSSRNKKKKKFADYVLQ E G+PIA+VEAKDNNHT S GMQQALGYADIL VPSAFSSNGDAFASHNK+    E+IETEL L++FP PAELWQRYKTYR I ++E++LV EPY DDGSGKEPRYYQ EAINRV+E VA+G KRLLLVMATGTGKTYTTFQIIWRLWKA KAKRILFLVDRNILADQTLVNDF+PFGSVMTKI+NRKIDP+YEIYLGLYQALTGP+EEDKI+++VS DFFDLIVIDECHRGSA +DSAWREIL+
Sbjct:   48 RGNLSSRNKKKKKFADYVLQKEKGIPIAVVEAKDNNHTASQGMQQALGYADILEVPSAFSSNGDAFASHNKVAAPSEDIETELSLDAFPTPAELWQRYKTYRGITEEEQDLVIEPYFDDGSGKEPRYYQAEAINRVMEKVAKGDKRLLLVMATGTGKTYTTFQIIWRLWKANKAKRILFLVDRNILADQTLVNDFRPFGSVMTKIKNRKIDPAYEIYLGLYQALTGPDEEDKIYQSVSRDFFDLIVIDECHRGSANDDSAWREILE 313          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89915.20842.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E2HAI6_9GAMM1.590e-16489.10Restriction endonuclease n=1 Tax=Gammaproteobacter... [more]
A0A7D9D1L4_9GAMM6.200e-16489.47Type I restriction enzyme EcoAI R protein n=1 Tax=... [more]
UPI00112156DC5.760e-16086.09DEAD/DEAH box helicase family protein n=1 Tax=Vibr... [more]
A0A0F7M414_9GAMM5.490e-15986.09Helicase, type I site-specific restriction-modific... [more]
A0A559QNA7_9ALTE6.530e-15986.84Type I restriction enzyme R subunit n=1 Tax=Altero... [more]
UPI00177ED1761.690e-15885.34DEAD/DEAH box helicase family protein n=1 Tax=Pela... [more]
UPI001E44B56E6.760e-15583.40DEAD/DEAH box helicase family protein n=1 Tax=Rhei... [more]
A0A1G0F3F1_9GAMM2.860e-15483.08Restriction endonuclease n=1 Tax=Gammaproteobacter... [more]
A0A556QP87_9BACT7.870e-15484.59DEAD/DEAH box helicase n=1 Tax=Rariglobus hederico... [more]
UPI0003B6CA498.330e-15484.21DEAD/DEAH box helicase family protein n=1 Tax=Spon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89915contigM-pyrifera_M_contig89915:2..799 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score458.4
Seed ortholog evalue2.3e-126
Seed eggNOG ortholog1123279.ATUS01000002_gene62
Preferred namehsdR
KEGG koko:K01153
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Type I site-specific restriction-modification system, R (restriction) subunit and related helicases
EggNOG OGs1J6M8@118884,1QTS7@1224,1RN63@1236,COG4096@1,COG4096@2
EC3.1.21.3
COG Functional cat.L
Best tax levelunclassified Gammaproteobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko02048
Exons1
Model size798
Cds size798
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816809.889454-CDS-M-pyrifera_M_contig89915:1..7991622816809.889454-CDS-M-pyrifera_M_contig89915:1..799Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89915 2..799 +
1692278191.623773-CDS-M-pyrifera_M_contig89915:1..7991692278191.623773-CDS-M-pyrifera_M_contig89915:1..799Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89915 2..799 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89915.20842.1prot_M-pyrifera_M_contig89915.20842.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig89915 2..799 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig89915.20842.1

>prot_M-pyrifera_M_contig89915.20842.1 ID=prot_M-pyrifera_M_contig89915.20842.1|Name=mRNA_M-pyrifera_M_contig89915.20842.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=266bp
RGNLSSRNKKKKKFADYVLQWEAGVPIAIVEAKDNNHTVSHGMQQALGYA
DILHVPSAFSSNGDAFASHNKIPLAGEEIETELPLESFPGPAELWQRYKT
YRDIHDDEEELVTEPYQDDGSGKEPRYYQVEAINRVIEAVARGRKRLLLV
MATGTGKTYTTFQIIWRLWKAKKAKRILFLVDRNILADQTLVNDFKPFGS
VMTKIRNRKIDPSYEIYLGLYQALTGPNEEDKIFKNVSADFFDLIVIDEC
HRGSAAEDSAWREILD
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mRNA from alignment at M-pyrifera_M_contig89915:2..799+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig89915.20842.1 ID=mRNA_M-pyrifera_M_contig89915.20842.1|Name=mRNA_M-pyrifera_M_contig89915.20842.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=798bp|location=Sequence derived from alignment at M-pyrifera_M_contig89915:2..799+ (Macrocystis pyrifera P11B4 male)
CGCGGCAATCTGTCTTCGCGCAACAAGAAAAAGAAGAAGTTCGCGGATTA CGTTCTGCAGTGGGAGGCGGGCGTCCCCATCGCGATTGTCGAGGCCAAAG ACAACAATCACACCGTCAGCCACGGCATGCAGCAGGCCCTCGGCTACGCC GATATCCTGCATGTCCCGAGCGCGTTCAGTTCCAACGGGGATGCGTTTGC CTCGCACAACAAAATCCCGCTGGCCGGCGAAGAGATTGAAACCGAGCTGC CGCTGGAGTCCTTTCCAGGCCCCGCCGAGCTCTGGCAGCGCTACAAAACG TACCGCGACATCCACGACGACGAAGAAGAACTCGTCACCGAGCCTTACCA GGACGATGGCTCCGGCAAGGAACCCCGCTATTACCAGGTTGAAGCGATCA ACCGGGTGATCGAAGCCGTCGCCAGAGGCCGCAAGCGCCTCCTGCTTGTT ATGGCTACCGGCACTGGCAAGACGTACACGACGTTCCAGATCATCTGGCG CCTGTGGAAGGCCAAAAAGGCGAAGCGAATTCTGTTTCTCGTCGACCGCA ACATCCTGGCCGATCAAACCCTCGTCAACGACTTCAAGCCGTTCGGCTCG GTCATGACGAAAATCAGGAACCGCAAGATCGACCCGTCCTACGAAATCTA CCTCGGTCTCTACCAGGCACTAACCGGGCCCAACGAGGAAGACAAGATCT TCAAAAACGTCTCCGCAGATTTTTTCGATCTGATCGTGATCGACGAGTGC CACCGGGGCAGTGCGGCCGAAGATTCCGCCTGGCGAGAAATTCTCGAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig89915:2..799+

>mRNA_M-pyrifera_M_contig89915.20842.1 ID=mRNA_M-pyrifera_M_contig89915.20842.1|Name=mRNA_M-pyrifera_M_contig89915.20842.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1596bp|location=Sequence derived from alignment at M-pyrifera_M_contig89915:2..799+ (Macrocystis pyrifera P11B4 male)
CGCGGCAATCTGTCTTCGCGCAACAAGAAAAAGAAGAAGTTCGCGGATTA
CGTTCTGCAGTGGGAGGCGGGCGTCCCCATCGCGATTGTCGAGGCCAAAG
ACAACAATCACACCGTCAGCCACGGCATGCAGCAGGCCCTCGGCTACGCC
GATATCCTGCATGTCCCGAGCGCGTTCAGTTCCAACGGGGATGCGTTTGC
CTCGCACAACAAAATCCCGCTGGCCGGCGAAGAGATTGAAACCGAGCTGC
CGCTGGAGTCCTTTCCAGGCCCCGCCGAGCTCTGGCAGCGCTACAAAACG
TACCGCGACATCCACGACGACGAAGAAGAACTCGTCACCGAGCCTTACCA
GGACGATGGCTCCGGCAAGGAACCCCGCTATTACCAGGTTGAAGCGATCA
ACCGGGTGATCGAAGCCGTCGCCAGAGGCCGCAAGCGCCTCCTGCTTGTT
ATGGCTACCGGCACTGGCAAGACGTACACGACGTTCCAGATCATCTGGCG
CCTGTGGAAGGCCAAAAAGGCGAAGCGAATTCTGTTTCTCGTCGACCGCA
ACATCCTGGCCGATCAAACCCTCGTCAACGACTTCAAGCCGTTCGGCTCG
GTCATGACGAAAATCAGGAACCGCAAGATCGACCCGTCCTACGAAATCTA
CCTCGGTCTCTACCAGGCACTAACCGGGCCCAACGAGGAAGACAAGATCT
TCAAAAACGTCTCCGCAGATTTTTTCGATCTGATCGTGATCGACGAGTGC
CACCGGGGCAGTGCGGCCGAAGATTCCGCCTGGCGAGAAATTCTCGACCG
CGGCAATCTGTCTTCGCGCAACAAGAAAAAGAAGAAGTTCGCGGATTACG
TTCTGCAGTGGGAGGCGGGCGTCCCCATCGCGATTGTCGAGGCCAAAGAC
AACAATCACACCGTCAGCCACGGCATGCAGCAGGCCCTCGGCTACGCCGA
TATCCTGCATGTCCCGAGCGCGTTCAGTTCCAACGGGGATGCGTTTGCCT
CGCACAACAAAATCCCGCTGGCCGGCGAAGAGATTGAAACCGAGCTGCCG
CTGGAGTCCTTTCCAGGCCCCGCCGAGCTCTGGCAGCGCTACAAAACGTA
CCGCGACATCCACGACGACGAAGAAGAACTCGTCACCGAGCCTTACCAGG
ACGATGGCTCCGGCAAGGAACCCCGCTATTACCAGGTTGAAGCGATCAAC
CGGGTGATCGAAGCCGTCGCCAGAGGCCGCAAGCGCCTCCTGCTTGTTAT
GGCTACCGGCACTGGCAAGACGTACACGACGTTCCAGATCATCTGGCGCC
TGTGGAAGGCCAAAAAGGCGAAGCGAATTCTGTTTCTCGTCGACCGCAAC
ATCCTGGCCGATCAAACCCTCGTCAACGACTTCAAGCCGTTCGGCTCGGT
CATGACGAAAATCAGGAACCGCAAGATCGACCCGTCCTACGAAATCTACC
TCGGTCTCTACCAGGCACTAACCGGGCCCAACGAGGAAGACAAGATCTTC
AAAAACGTCTCCGCAGATTTTTTCGATCTGATCGTGATCGACGAGTGCCA
CCGGGGCAGTGCGGCCGAAGATTCCGCCTGGCGAGAAATTCTCGAC
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