mRNA_M-pyrifera_M_contig89912.20841.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig89912.20841.1
Unique NamemRNA_M-pyrifera_M_contig89912.20841.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig89912.20841.1 vs. uniprot
Match: A6CGS5_9PLAN (Chaperone protein ClpB (Fragment) n=26 Tax=Planctomycetaceae TaxID=126 RepID=A6CGS5_9PLAN)

HSP 1 Score: 488 bits (1255), Expect = 4.090e-165
Identity = 251/265 (94.72%), Postives = 258/265 (97.36%), Query Frame = 1
Query:    1 NEDYAQAYNAEQELNAARQRLAEMEARVAELGDDAGERLLREEVTSEDIAKVISMWTGIPVSKMLQGERDKLLRMEDEIHKRMINQSEAVEAVSNAVRRSRSGLQDQNRPIGSFMFLGPTGVGKTELCKALASFLFDDERSMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGRLTEAVRRQPYSVVLLDEVEKAHRDVFNILLQLLDDGRLTDSHGRTVDFSNTIVVMTSNIGSQTIMDLSGKEDEELIHNRVMDALQHEFLPE 795
            NEDY+QAYNAEQELNAARQRL EME +V ELGD  GERLLREEVTSEDIAKVISMWTGIP+SKMLQGER+KLLRMEDEIHKRMINQ+EAV AVSNAVRRSRSGLQDQNRPIGSFMFLGPTGVGKTELCKALA FLFDDER+MIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGRLTEAVRRQPYSVVLLDEVEKAHRDVFNILLQLLDDGRLTDSHGRTVDFSNTIVVMTSNIGSQTIMDLSGKEDE+LIHNRVMDALQHEFLPE
Sbjct:  487 NEDYSQAYNAEQELNAARQRLTEMEQKVTELGDVGGERLLREEVTSEDIAKVISMWTGIPISKMLQGEREKLLRMEDEIHKRMINQNEAVLAVSNAVRRSRSGLQDQNRPIGSFMFLGPTGVGKTELCKALAGFLFDDERNMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGRLTEAVRRQPYSVVLLDEVEKAHRDVFNILLQLLDDGRLTDSHGRTVDFSNTIVVMTSNIGSQTIMDLSGKEDEDLIHNRVMDALQHEFLPE 751          
BLAST of mRNA_M-pyrifera_M_contig89912.20841.1 vs. uniprot
Match: A0A5C9C8Q0_9BACT (ATP-dependent Clp protease ATP-binding subunit ClpB n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A5C9C8Q0_9BACT)

HSP 1 Score: 417 bits (1072), Expect = 7.150e-140
Identity = 210/265 (79.25%), Postives = 238/265 (89.81%), Query Frame = 1
Query:    1 NEDYAQAYNAEQELNAARQRLAEMEARVAELGDDAGERLLREEVTSEDIAKVISMWTGIPVSKMLQGERDKLLRMEDEIHKRMINQSEAVEAVSNAVRRSRSGLQDQNRPIGSFMFLGPTGVGKTELCKALASFLFDDERSMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGRLTEAVRRQPYSVVLLDEVEKAHRDVFNILLQLLDDGRLTDSHGRTVDFSNTIVVMTSNIGSQTIMDLSGKEDEELIHNRVMDALQHEFLPE 795
            NED+  AY AEQ+L  A + L E+E R +E  +  GERLLREE+T EDIAKV+S+WTGIPV++MLQ ERDKLL+MED IH RMINQ EAV AVSNAVRRSRSGLQD+NRPIGSF+FLGPTGVGKTELCKALA+FLFDDE +M+R+DMSEFMEKHSVARLIGAPPGYVGYEEGGRLTEAVRR PY V+LLDE+EKAHRDVFNILLQLLDDGRLTD HGRTVDF+NTIVVMTSNIGSQ+IM+LSGK++E+ I+ RVMDAL+ EFLPE
Sbjct:  297 NEDFMAAYKAEQDLQKAEKELTELEQRSSETSNAKGERLLREEITEEDIAKVVSLWTGIPVARMLQSERDKLLKMEDAIHDRMINQHEAVVAVSNAVRRSRSGLQDRNRPIGSFIFLGPTGVGKTELCKALAAFLFDDEHAMVRVDMSEFMEKHSVARLIGAPPGYVGYEEGGRLTEAVRRHPYCVLLLDEIEKAHRDVFNILLQLLDDGRLTDGHGRTVDFTNTIVVMTSNIGSQSIMELSGKDNEKEINRRVMDALRREFLPE 561          
BLAST of mRNA_M-pyrifera_M_contig89912.20841.1 vs. uniprot
Match: UPI00199CA8A9 (ATP-dependent chaperone ClpB n=1 Tax=Fuerstiella sp. TaxID=1936112 RepID=UPI00199CA8A9)

HSP 1 Score: 419 bits (1078), Expect = 1.490e-138
Identity = 213/265 (80.38%), Postives = 236/265 (89.06%), Query Frame = 1
Query:    1 NEDYAQAYNAEQELNAARQRLAEMEARVAELGDDAGERLLREEVTSEDIAKVISMWTGIPVSKMLQGERDKLLRMEDEIHKRMINQSEAVEAVSNAVRRSRSGLQDQNRPIGSFMFLGPTGVGKTELCKALASFLFDDERSMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGRLTEAVRRQPYSVVLLDEVEKAHRDVFNILLQLLDDGRLTDSHGRTVDFSNTIVVMTSNIGSQTIMDLSGKEDEELIHNRVMDALQHEFLPE 795
            NED+  A   EQ+L  A ++L EMEA+ AEL  D   RLLREEVT EDIA+V+S+WT IPVS+M+QGER+KLLRMEDEIHKRMINQ EAVEAVSNAVRR+RSG+ D NRPIGSFMFLGPTGVGKTELCKALA+F+FDDER+M+RIDMSEFME+HSVARLIGAPPGYVGYEEGGRLTEAVRR PY V+LLDEVEKAHRDVFNILLQLLDDGRLTDS GRTVDF+NTIVVMTSNIGSQ I +LSG+ DE+ IHNRVMDALQ  FLPE
Sbjct:  502 NEDFVDAQKTEQQLKDAEKKLKEMEAKSAELNTDKENRLLREEVTEEDIARVVSLWTSIPVSRMMQGEREKLLRMEDEIHKRMINQHEAVEAVSNAVRRARSGMGDPNRPIGSFMFLGPTGVGKTELCKALANFMFDDERNMVRIDMSEFMERHSVARLIGAPPGYVGYEEGGRLTEAVRRNPYCVILLDEVEKAHRDVFNILLQLLDDGRLTDSQGRTVDFTNTIVVMTSNIGSQAIQELSGQADEKEIHNRVMDALQKHFLPE 766          
BLAST of mRNA_M-pyrifera_M_contig89912.20841.1 vs. uniprot
Match: A0A2D6SRB9_9PLAN (Chaperone protein ClpB n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2D6SRB9_9PLAN)

HSP 1 Score: 417 bits (1073), Expect = 2.670e-138
Identity = 209/265 (78.87%), Postives = 238/265 (89.81%), Query Frame = 1
Query:    1 NEDYAQAYNAEQELNAARQRLAEMEARVAELGDDAGERLLREEVTSEDIAKVISMWTGIPVSKMLQGERDKLLRMEDEIHKRMINQSEAVEAVSNAVRRSRSGLQDQNRPIGSFMFLGPTGVGKTELCKALASFLFDDERSMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGRLTEAVRRQPYSVVLLDEVEKAHRDVFNILLQLLDDGRLTDSHGRTVDFSNTIVVMTSNIGSQTIMDLSGKEDEELIHNRVMDALQHEFLPE 795
            NEDY  A+  EQ+L +A QRLAE+E R +E+G++ GERLLREEVTSEDIAKV+S WTGIPV++MLQGER+KLL ME +IHKRMI+Q EAVEAVSNAVRRSRSGLQD+NRPIGSF+FLGPTGVGKTELCKALA FLFDDE +M+RIDMSEFME HSVARLIGAPPGYVGYEEGGRLTEAVRR+PY V+LLDE+EKAHRDVFN+LLQLLDDGRLTDSHGRTVDF NTIVVMTSNIGS  IM+L+G +DE  I  +V++ L+ EFLPE
Sbjct:  442 NEDYITAHQTEQQLRSAEQRLAELENRFSEIGEEQGERLLREEVTSEDIAKVVSTWTGIPVARMLQGEREKLLNMEQDIHKRMIDQVEAVEAVSNAVRRSRSGLQDRNRPIGSFIFLGPTGVGKTELCKALAEFLFDDENAMVRIDMSEFMEPHSVARLIGAPPGYVGYEEGGRLTEAVRRRPYCVILLDEIEKAHRDVFNVLLQLLDDGRLTDSHGRTVDFCNTIVVMTSNIGSPIIMELAGSDDESQIETQVLETLRREFLPE 706          
BLAST of mRNA_M-pyrifera_M_contig89912.20841.1 vs. uniprot
Match: A0A5C6M1Z6_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomyces bekefii TaxID=1653850 RepID=A0A5C6M1Z6_9PLAN)

HSP 1 Score: 407 bits (1047), Expect = 1.870e-137
Identity = 209/265 (78.87%), Postives = 229/265 (86.42%), Query Frame = 1
Query:    1 NEDYAQAYNAEQELNAARQRLAEMEARVAELGDDAGERLLREEVTSEDIAKVISMWTGIPVSKMLQGERDKLLRMEDEIHKRMINQSEAVEAVSNAVRRSRSGLQDQNRPIGSFMFLGPTGVGKTELCKALASFLFDDERSMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGRLTEAVRRQPYSVVLLDEVEKAHRDVFNILLQLLDDGRLTDSHGRTVDFSNTIVVMTSNIGSQTIMDLSGKEDEELIHNRVMDALQHEFLPE 795
            NED+ +A   EQEL  A Q+LA  EAR AE+      RLLREEVT EDIA+V+S+WTGIPV++M+QGER+KLL ME EIH+RMINQ EAVEAVSNAVRRSRSGLQD NRPIGSFMFLGPTGVGKTELCKALA F+FDDER+M+RIDMSEFMEKHSVARLIGAPPGYVGYEEGGRLTEAVRR PY V+LLDEVEKAHRDVFNILLQLLDDGRLTDS GRTV+F+NT+VVMTSNIGSQ I  LSG  DE  I  RVM+ALQ  FLPE
Sbjct:  188 NEDFVEAQRTEQELKEAEQQLAAAEARSAEMNPSTDNRLLREEVTGEDIARVVSLWTGIPVARMMQGEREKLLNMEREIHRRMINQHEAVEAVSNAVRRSRSGLQDPNRPIGSFMFLGPTGVGKTELCKALAHFMFDDERNMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGRLTEAVRRNPYCVILLDEVEKAHRDVFNILLQLLDDGRLTDSQGRTVNFTNTLVVMTSNIGSQAIQQLSGTADESEIRRRVMEALQKHFLPE 452          
BLAST of mRNA_M-pyrifera_M_contig89912.20841.1 vs. uniprot
Match: A0A3L7PQV7_9BACT (Chaperone protein ClpB (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7PQV7_9BACT)

HSP 1 Score: 415 bits (1067), Expect = 3.650e-137
Identity = 208/265 (78.49%), Postives = 238/265 (89.81%), Query Frame = 1
Query:    1 NEDYAQAYNAEQELNAARQRLAEMEARVAELGDDAGERLLREEVTSEDIAKVISMWTGIPVSKMLQGERDKLLRMEDEIHKRMINQSEAVEAVSNAVRRSRSGLQDQNRPIGSFMFLGPTGVGKTELCKALASFLFDDERSMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGRLTEAVRRQPYSVVLLDEVEKAHRDVFNILLQLLDDGRLTDSHGRTVDFSNTIVVMTSNIGSQTIMDLSGKEDEELIHNRVMDALQHEFLPE 795
            N+D+ +A+  EQ+L  A Q+L   E R +++G D+G+RLLREEVT EDIAKV+  WTGIPVS+++Q E+ KLL+MED IH+RMINQSEAV AVSNAVRRSRSGLQD NRPIGSF+FLGPTGVGKTELCKALA FLFDDER+MIRIDMSEFMEKHSVARLIGAPPGY+GYEEGG+LTEAVRR+PYSV+LLDE+EKAHRDVFN+LLQLLDDGRLTDSHGRTVDF+NTIVVMTSNIGSQTIMDL+GKED+  I  RVM AL+ EFLPE
Sbjct:  499 NDDFVRAFGTEQKLKEAEQKLVAAEQRASQVGGDSGQRLLREEVTQEDIAKVVGTWTGIPVSRLMQTEKTKLLQMEDHIHERMINQSEAVTAVSNAVRRSRSGLQDPNRPIGSFIFLGPTGVGKTELCKALAGFLFDDERAMIRIDMSEFMEKHSVARLIGAPPGYIGYEEGGKLTEAVRRRPYSVLLLDEIEKAHRDVFNVLLQLLDDGRLTDSHGRTVDFTNTIVVMTSNIGSQTIMDLAGKEDDAEISRRVMHALRKEFLPE 763          
BLAST of mRNA_M-pyrifera_M_contig89912.20841.1 vs. uniprot
Match: A0A3B9CUQ9_9PLAN (Chaperone protein ClpB n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3B9CUQ9_9PLAN)

HSP 1 Score: 415 bits (1066), Expect = 1.350e-136
Identity = 209/266 (78.57%), Postives = 239/266 (89.85%), Query Frame = 1
Query:    1 NEDYAQAYNAEQELNAARQRLAEMEARVAELGDDAGERLLREEVTSEDIAKVISMWTGIPVSKMLQGERDKLLRMEDEIHKRMINQSEAVEAVSNAVRRSRSGLQDQNRPIGSFMFLGPTGVGKTELCKALASFLFDDERSMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGRLTEAVRRQPYSVVLLDEVEKAHRDVFNILLQLLDDGRLTDSHGRTVDFSNTIVVMTSNIGSQTIMDLSGKE-DEELIHNRVMDALQHEFLPE 795
            NEDY +A+NA+Q+L  A  RLAEMEA+ A+L +D   RLLREEVT ED+A+V+S+WTG+PV++M+QGER+KLLRME EIH+RMINQ +AVEAVSNAVRR+RSG+QD NRPIGSFMFLGPTGVGKTELCKALA FLFDDER+M+RIDMSEFME+HSVARLIGAPPGYVGYEEGGRLTEAVRR PY V+LLDEVEKAHRDVFNILLQLLDDGRLTDS GRTVDFSN IVVMTSNIGSQ IM+L+ ++ D + IHNR MD+LQ  FLPE
Sbjct:  500 NEDYQEAFNADQQLKEAESRLAEMEAQSAQLTEDPENRLLREEVTDEDVARVVSLWTGVPVARMMQGEREKLLRMETEIHRRMINQHQAVEAVSNAVRRARSGMQDPNRPIGSFMFLGPTGVGKTELCKALAEFLFDDERAMVRIDMSEFMERHSVARLIGAPPGYVGYEEGGRLTEAVRRNPYCVILLDEVEKAHRDVFNILLQLLDDGRLTDSQGRTVDFSNCIVVMTSNIGSQAIMELTSEDSDPKEIHNRCMDSLQQHFLPE 765          
BLAST of mRNA_M-pyrifera_M_contig89912.20841.1 vs. uniprot
Match: A0A7C4LLE3_9PLAN (Chaperone protein ClpB n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=A0A7C4LLE3_9PLAN)

HSP 1 Score: 414 bits (1064), Expect = 2.380e-136
Identity = 208/265 (78.49%), Postives = 242/265 (91.32%), Query Frame = 1
Query:    1 NEDYAQAYNAEQELNAARQRLAEMEARVAELGDDAGERLLREEVTSEDIAKVISMWTGIPVSKMLQGERDKLLRMEDEIHKRMINQSEAVEAVSNAVRRSRSGLQDQNRPIGSFMFLGPTGVGKTELCKALASFLFDDERSMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGRLTEAVRRQPYSVVLLDEVEKAHRDVFNILLQLLDDGRLTDSHGRTVDFSNTIVVMTSNIGSQTIMDLSGKEDEELIHNRVMDALQHEFLPE 795
            N+DY +A+ AEQ+L AA+QRLA+ME +VA LG   G+RLLREEVT EDIAKV+S WTGIPVS+MLQ ER KLL+MED IH+R+INQ EAV AV+NAVRR+RSG+QD NRPIGSF+FLGPTGVGKTELCKALA FLFDDER+M+RIDMSEFMEKH+VARLIGAPPGYVGYEEGG+LTEAVRR+PY+V+LLDE+EKAHRDVFN+LLQLLDDGRLTDSHGRTVDF+NTIVVMTSNIGSQ IM+L+G+ED+  I  RV++AL+ EFLPE
Sbjct:  499 NDDYVRAFQAEQQLKAAQQRLADMEQKVAALGQ--GQRLLREEVTQEDIAKVVSSWTGIPVSRMLQTERQKLLQMEDHIHRRLINQEEAVTAVANAVRRARSGMQDPNRPIGSFIFLGPTGVGKTELCKALAEFLFDDERAMVRIDMSEFMEKHAVARLIGAPPGYVGYEEGGKLTEAVRRRPYTVLLLDEIEKAHRDVFNVLLQLLDDGRLTDSHGRTVDFTNTIVVMTSNIGSQMIMELAGEEDDAEIRRRVLEALRREFLPE 761          
BLAST of mRNA_M-pyrifera_M_contig89912.20841.1 vs. uniprot
Match: A0A7C2PBP1_9PLAN (Chaperone protein ClpB n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=A0A7C2PBP1_9PLAN)

HSP 1 Score: 414 bits (1063), Expect = 3.350e-136
Identity = 208/265 (78.49%), Postives = 242/265 (91.32%), Query Frame = 1
Query:    1 NEDYAQAYNAEQELNAARQRLAEMEARVAELGDDAGERLLREEVTSEDIAKVISMWTGIPVSKMLQGERDKLLRMEDEIHKRMINQSEAVEAVSNAVRRSRSGLQDQNRPIGSFMFLGPTGVGKTELCKALASFLFDDERSMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGRLTEAVRRQPYSVVLLDEVEKAHRDVFNILLQLLDDGRLTDSHGRTVDFSNTIVVMTSNIGSQTIMDLSGKEDEELIHNRVMDALQHEFLPE 795
            N+DY +A+ AEQ+L AA+Q+L EME++VA LG+  G+RLLREEVT EDIAKV+S WTG+PVS+MLQ ER KLL+MED IH+RMINQ EAV AV+NAVRR+RSG+QD +RPIGSF+FLGPTGVGKTELCKALA FLFDDER+M+RIDMSEFMEKHSVARLIGAPPGYVGYEEGG+LTEAVRR+PY+V+LLDE+EKAHRDVFN+LLQLLDDGRLTDSHGRTVDF+NTIVVMTSNIGSQ IMDL+G+ED+  I  RV+ AL+ EFLPE
Sbjct:  499 NDDYVRAFQAEQQLKAAQQKLTEMESKVAALGE--GQRLLREEVTEEDIAKVVSSWTGVPVSRMLQTERQKLLQMEDHIHQRMINQEEAVTAVANAVRRARSGMQDPHRPIGSFIFLGPTGVGKTELCKALAEFLFDDERAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGKLTEAVRRRPYTVLLLDEIEKAHRDVFNVLLQLLDDGRLTDSHGRTVDFTNTIVVMTSNIGSQLIMDLAGQEDDAEIRRRVLGALRKEFLPE 761          
BLAST of mRNA_M-pyrifera_M_contig89912.20841.1 vs. uniprot
Match: A0A4P5WWR8_9BACT (Chaperone protein ClpB n=4 Tax=Planctomycetia TaxID=203683 RepID=A0A4P5WWR8_9BACT)

HSP 1 Score: 412 bits (1060), Expect = 1.270e-135
Identity = 212/265 (80.00%), Postives = 231/265 (87.17%), Query Frame = 1
Query:    1 NEDYAQAYNAEQELNAARQRLAEMEARVAELGDDAGERLLREEVTSEDIAKVISMWTGIPVSKMLQGERDKLLRMEDEIHKRMINQSEAVEAVSNAVRRSRSGLQDQNRPIGSFMFLGPTGVGKTELCKALASFLFDDERSMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGRLTEAVRRQPYSVVLLDEVEKAHRDVFNILLQLLDDGRLTDSHGRTVDFSNTIVVMTSNIGSQTIMDLSGKEDEELIHNRVMDALQHEFLPE 795
            NED+ +A   EQEL  A Q+LA  EAR AE+  D+  RLLREEVT EDIA+V+S+WTGIPV++M+QGER+KLL ME EIH+RMINQ EAVEAVSNAVRRSRSGLQD NRPIGSFMFLGPTGVGKTELCKALA F+FDDER+M+RIDMSEFMEKHSVARLIGAPPGYVGYEEGGRLTEAVRR PY V+LLDEVEKAHRDVFNILLQLLDDGRLTDS GRTVDF+NTIVVMTSNIGSQ I  LSG  DE  I  RVM+ALQ  FLPE
Sbjct:  501 NEDFVEAQRTEQELKEAEQQLAAAEARSAEMKQDSDNRLLREEVTDEDIARVVSLWTGIPVARMMQGEREKLLNMEREIHRRMINQHEAVEAVSNAVRRSRSGLQDPNRPIGSFMFLGPTGVGKTELCKALAHFMFDDERNMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGRLTEAVRRNPYCVILLDEVEKAHRDVFNILLQLLDDGRLTDSQGRTVDFTNTIVVMTSNIGSQAIQQLSGTADESEIRRRVMEALQKHFLPE 765          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89912.20841.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A6CGS5_9PLAN4.090e-16594.72Chaperone protein ClpB (Fragment) n=26 Tax=Plancto... [more]
A0A5C9C8Q0_9BACT7.150e-14079.25ATP-dependent Clp protease ATP-binding subunit Clp... [more]
UPI00199CA8A91.490e-13880.38ATP-dependent chaperone ClpB n=1 Tax=Fuerstiella s... [more]
A0A2D6SRB9_9PLAN2.670e-13878.87Chaperone protein ClpB n=1 Tax=Planctomycetaceae b... [more]
A0A5C6M1Z6_9PLAN1.870e-13778.87Uncharacterized protein (Fragment) n=1 Tax=Plancto... [more]
A0A3L7PQV7_9BACT3.650e-13778.49Chaperone protein ClpB (Fragment) n=1 Tax=Planctom... [more]
A0A3B9CUQ9_9PLAN1.350e-13678.57Chaperone protein ClpB n=1 Tax=Planctomycetaceae b... [more]
A0A7C4LLE3_9PLAN2.380e-13678.49Chaperone protein ClpB n=1 Tax=Schlesneria paludic... [more]
A0A7C2PBP1_9PLAN3.350e-13678.49Chaperone protein ClpB n=1 Tax=Schlesneria paludic... [more]
A0A4P5WWR8_9BACT1.270e-13580.00Chaperone protein ClpB n=4 Tax=Planctomycetia TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89912contigM-pyrifera_M_contig89912:3..797 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score491.9
Seed ortholog evalue1.9e-136
Seed eggNOG ortholog344747.PM8797T_01599
Preferred nameclpB
KEGG koko:K03694,ko:K03695
KEGG Pathwayko04213,map04213
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944
EggNOG free text desc.Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
EggNOG OGs2IWYZ@203682,COG0542@1,COG0542@2
COG Functional cat.O
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03110
Exons1
Model size795
Cds size795
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816809.8601422-CDS-M-pyrifera_M_contig89912:2..7971622816809.8601422-CDS-M-pyrifera_M_contig89912:2..797Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89912 3..797 -
1692278191.610287-CDS-M-pyrifera_M_contig89912:2..7971692278191.610287-CDS-M-pyrifera_M_contig89912:2..797Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89912 3..797 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89912.20841.1prot_M-pyrifera_M_contig89912.20841.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig89912 3..797 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig89912.20841.1

>prot_M-pyrifera_M_contig89912.20841.1 ID=prot_M-pyrifera_M_contig89912.20841.1|Name=mRNA_M-pyrifera_M_contig89912.20841.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=265bp
NEDYAQAYNAEQELNAARQRLAEMEARVAELGDDAGERLLREEVTSEDIA
KVISMWTGIPVSKMLQGERDKLLRMEDEIHKRMINQSEAVEAVSNAVRRS
RSGLQDQNRPIGSFMFLGPTGVGKTELCKALASFLFDDERSMIRIDMSEF
MEKHSVARLIGAPPGYVGYEEGGRLTEAVRRQPYSVVLLDEVEKAHRDVF
NILLQLLDDGRLTDSHGRTVDFSNTIVVMTSNIGSQTIMDLSGKEDEELI
HNRVMDALQHEFLPE
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mRNA from alignment at M-pyrifera_M_contig89912:3..797-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig89912.20841.1 ID=mRNA_M-pyrifera_M_contig89912.20841.1|Name=mRNA_M-pyrifera_M_contig89912.20841.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=795bp|location=Sequence derived from alignment at M-pyrifera_M_contig89912:3..797- (Macrocystis pyrifera P11B4 male)
AATGAAGACTATGCCCAGGCTTACAACGCCGAACAGGAGTTGAATGCGGC CCGGCAGCGTCTGGCCGAGATGGAAGCGCGTGTCGCGGAACTGGGAGATG ACGCCGGTGAGCGGCTTCTGCGTGAAGAGGTGACTTCGGAAGACATTGCC AAGGTCATCAGCATGTGGACCGGAATTCCGGTATCGAAGATGCTGCAAGG CGAACGCGATAAGCTCCTGAGGATGGAAGATGAAATTCATAAACGGATGA TTAACCAGAGTGAAGCAGTCGAAGCGGTTTCTAACGCGGTTCGTCGTTCA CGATCTGGTCTGCAGGATCAGAATCGTCCCATCGGTTCGTTCATGTTCCT GGGGCCGACCGGCGTCGGGAAAACGGAGCTTTGTAAGGCATTGGCCAGTT TTCTGTTTGACGATGAACGCAGCATGATCCGCATCGACATGAGTGAATTC ATGGAGAAGCATTCTGTGGCTCGTCTGATTGGTGCCCCTCCGGGGTATGT CGGATACGAAGAAGGGGGGCGGTTGACCGAGGCGGTCAGGCGGCAGCCTT ATTCGGTGGTCCTGCTGGACGAGGTTGAAAAGGCACACCGGGATGTATTT AACATACTCCTGCAGTTGCTGGACGACGGTCGTCTGACGGATAGCCACGG GCGGACTGTTGATTTCTCAAACACGATTGTGGTGATGACTTCCAACATCG GCAGCCAGACAATCATGGATCTGTCGGGCAAAGAAGATGAGGAGCTGATT CATAATCGTGTGATGGATGCCCTGCAGCATGAGTTTCTGCCAGAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig89912:3..797-

>mRNA_M-pyrifera_M_contig89912.20841.1 ID=mRNA_M-pyrifera_M_contig89912.20841.1|Name=mRNA_M-pyrifera_M_contig89912.20841.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1590bp|location=Sequence derived from alignment at M-pyrifera_M_contig89912:3..797- (Macrocystis pyrifera P11B4 male)
AATGAAGACTATGCCCAGGCTTACAACGCCGAACAGGAGTTGAATGCGGC
CCGGCAGCGTCTGGCCGAGATGGAAGCGCGTGTCGCGGAACTGGGAGATG
ACGCCGGTGAGCGGCTTCTGCGTGAAGAGGTGACTTCGGAAGACATTGCC
AAGGTCATCAGCATGTGGACCGGAATTCCGGTATCGAAGATGCTGCAAGG
CGAACGCGATAAGCTCCTGAGGATGGAAGATGAAATTCATAAACGGATGA
TTAACCAGAGTGAAGCAGTCGAAGCGGTTTCTAACGCGGTTCGTCGTTCA
CGATCTGGTCTGCAGGATCAGAATCGTCCCATCGGTTCGTTCATGTTCCT
GGGGCCGACCGGCGTCGGGAAAACGGAGCTTTGTAAGGCATTGGCCAGTT
TTCTGTTTGACGATGAACGCAGCATGATCCGCATCGACATGAGTGAATTC
ATGGAGAAGCATTCTGTGGCTCGTCTGATTGGTGCCCCTCCGGGGTATGT
CGGATACGAAGAAGGGGGGCGGTTGACCGAGGCGGTCAGGCGGCAGCCTT
ATTCGGTGGTCCTGCTGGACGAGGTTGAAAAGGCACACCGGGATGTATTT
AACATACTCCTGCAGTTGCTGGACGACGGTCGTCTGACGGATAGCCACGG
GCGGACTGTTGATTTCTCAAACACGATTGTGGTGATGACTTCCAACATCG
GCAGCCAGACAATCATGGATCTGTCGGGCAAAGAAGATGAGGAGCTGATT
CATAATCGTGTGATGGATGCCCTGCAGCATGAGTTTCTGCCAGAGAATGA
AGACTATGCCCAGGCTTACAACGCCGAACAGGAGTTGAATGCGGCCCGGC
AGCGTCTGGCCGAGATGGAAGCGCGTGTCGCGGAACTGGGAGATGACGCC
GGTGAGCGGCTTCTGCGTGAAGAGGTGACTTCGGAAGACATTGCCAAGGT
CATCAGCATGTGGACCGGAATTCCGGTATCGAAGATGCTGCAAGGCGAAC
GCGATAAGCTCCTGAGGATGGAAGATGAAATTCATAAACGGATGATTAAC
CAGAGTGAAGCAGTCGAAGCGGTTTCTAACGCGGTTCGTCGTTCACGATC
TGGTCTGCAGGATCAGAATCGTCCCATCGGTTCGTTCATGTTCCTGGGGC
CGACCGGCGTCGGGAAAACGGAGCTTTGTAAGGCATTGGCCAGTTTTCTG
TTTGACGATGAACGCAGCATGATCCGCATCGACATGAGTGAATTCATGGA
GAAGCATTCTGTGGCTCGTCTGATTGGTGCCCCTCCGGGGTATGTCGGAT
ACGAAGAAGGGGGGCGGTTGACCGAGGCGGTCAGGCGGCAGCCTTATTCG
GTGGTCCTGCTGGACGAGGTTGAAAAGGCACACCGGGATGTATTTAACAT
ACTCCTGCAGTTGCTGGACGACGGTCGTCTGACGGATAGCCACGGGCGGA
CTGTTGATTTCTCAAACACGATTGTGGTGATGACTTCCAACATCGGCAGC
CAGACAATCATGGATCTGTCGGGCAAAGAAGATGAGGAGCTGATTCATAA
TCGTGTGATGGATGCCCTGCAGCATGAGTTTCTGCCAGAG
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