mRNA_M-pyrifera_M_contig89891.20833.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig89891.20833.1
Unique NamemRNA_M-pyrifera_M_contig89891.20833.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig89891.20833.1 vs. uniprot
Match: K3X4V6_GLOUD (POLAc domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4V6_GLOUD)

HSP 1 Score: 189 bits (480), Expect = 5.300e-53
Identity = 95/176 (53.98%), Postives = 123/176 (69.89%), Query Frame = 1 
Query:    1 DFGSGPQIWIDNLDDAEGTLDVFREFFENERLKKVWHNYSFDRHVLYNHGIDSRGLGGDTMHMARIWDTSRDRASAGGSSSGFSLEALSSSEEVFRGLPNRPPEGRFEKRTMKEIFGRKAIKKDGTEGKLTVVPDVLELQRAEEWREDFIRYSADDAEVTWWLREALEMRLREMSW 528
            DFG+GP +W+DNLD AEGTL+ FR+F E++ +KKVWHNYSFDRHVLYNHGI+ +GLGGDTMHMAR+W+T+R +      + G+SLEALS    + R            KR MKE+FG   +KKDG+EGK  ++P V ELQR  E+R  +IRYS  DAE TW+L   L+ +L +  W
Sbjct:   86 DFGNGPYVWVDNLDCAEGTLEYFRDFLESKEIKKVWHNYSFDRHVLYNHGINVQGLGGDTMHMARLWNTARFQ------NGGYSLEALSEDLLLQR------------KRPMKELFGIPKLKKDGSEGKERIMPTVEELQRFPEFRNRWIRYSVYDAESTWYLHRVLKHKLEQTLW 243
[Close]
BLAST of mRNA_M-pyrifera_M_contig89891.20833.1 vs. uniprot
Match: A0A2D4CD95_PYTIN (DNA polymerase I, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CD95_PYTIN)

HSP 1 Score: 191 bits (484), Expect = 6.280e-53
Identity = 97/176 (55.11%), Postives = 123/176 (69.89%), Query Frame = 1 
Query:    1 DFGSGPQIWIDNLDDAEGTLDVFREFFENERLKKVWHNYSFDRHVLYNHGIDSRGLGGDTMHMARIWDTSRDRASAGGSSSGFSLEALSSSEEVFRGLPNRPPEGRFEKRTMKEIFGRKAIKKDGTEGKLTVVPDVLELQRAEEWREDFIRYSADDAEVTWWLREALEMRLREMSW 528
            D+G+GP +WIDNLD AEGTL+ FREF E++  KKVWHNYSFDRHVLYNHGID +GLGGDTMHMAR+W+T+R +      + G+SLEALS+  ++ R            KR MKE+FG   +KKDG+ GK  ++P V ELQR  E+R  +IRYS  DAE TW+L   L+ +L E  W
Sbjct:  137 DYGNGPYVWIDNLDSAEGTLEYFREFLESKEYKKVWHNYSFDRHVLYNHGIDVQGLGGDTMHMARLWNTARFQ------NGGYSLEALSA--DLLR----------QRKRPMKELFGIPKLKKDGSAGKERIMPSVEELQRFPEFRHRWIRYSVFDAECTWFLHRVLQHKLNETLW 294
[Close]
BLAST of mRNA_M-pyrifera_M_contig89891.20833.1 vs. uniprot
Match: A0A8K1C7H2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7H2_PYTOL)

HSP 1 Score: 187 bits (475), Expect = 3.660e-52
Identity = 95/176 (53.98%), Postives = 121/176 (68.75%), Query Frame = 1 
Query:    1 DFGSGPQIWIDNLDDAEGTLDVFREFFENERLKKVWHNYSFDRHVLYNHGIDSRGLGGDTMHMARIWDTSRDRASAGGSSSGFSLEALSSSEEVFRGLPNRPPEGRFEKRTMKEIFGRKAIKKDGTEGKLTVVPDVLELQRAEEWREDFIRYSADDAEVTWWLREALEMRLREMSW 528
            D+G+GP +WIDNLD AEGTL+ FREF E++  KKVWHNYSFDRHVLYNHGI+ +GLGGDTMHMAR+W+T+R +      + G+SLEALS    + R            KR MKE+FG   +KKDG+ GK  ++P V ELQR  E+R  +IRYS  DAE TW+L   L+ +L +  W
Sbjct:  126 DYGNGPYVWIDNLDSAEGTLEYFREFLESKEYKKVWHNYSFDRHVLYNHGINVQGLGGDTMHMARLWNTARFQ------NGGYSLEALSEDLLLQR------------KRPMKELFGIPKLKKDGSAGKERIMPSVEELQRFPEFRNRWIRYSVFDAECTWFLHRVLQEKLDQTLW 283
[Close]
BLAST of mRNA_M-pyrifera_M_contig89891.20833.1 vs. uniprot
Match: A0A7S0WY64_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WY64_9CHLO)

HSP 1 Score: 181 bits (459), Expect = 1.780e-51
Identity = 93/169 (55.03%), Postives = 119/169 (70.41%), Query Frame = 1 
Query:   19 QIWIDNL-DDAEGTLDVFREFFENERLKKVWHNYSFDRHVLYNHGIDSRGLGGDTMHMARIWDTSRDRASAGGSSSGFSLEALSSSEEVFRGLPN--RPPEGRFEKRTMKEIFGRKAIKKDGTEGKLTVVPDVLELQRAEEWREDFIRYSADDAEVTWWLREALEMRLR 516
            ++W+D   ++ E  L VF+E+FE+E +KKVWHNYSFDRHVL NH ID +G GGDTMHMAR+WD+SR   S G    G+SL AL++ + V  G P+  R    R  K +MK+IFGR  +KKDGT GKLTV+P V +LQ   E R  FI YS  DAE TW+LRE+LE++LR
Sbjct:  327 KVWVDTYGEEGERVLQVFKEYFEDEHIKKVWHNYSFDRHVLGNHDIDCKGFGGDTMHMARLWDSSRQGKSGG---KGYSLAALTNDKRVMSGCPDETRKEIARHAKTSMKKIFGRPNLKKDGTLGKLTVIPPVDQLQTDPETRGKFISYSCRDAEATWYLRESLEVKLR 492
[Close]
BLAST of mRNA_M-pyrifera_M_contig89891.20833.1 vs. uniprot
Match: G4YGY4_PHYSP (3'-5' exonuclease domain-containing protein n=2 Tax=Phytophthora sojae TaxID=67593 RepID=G4YGY4_PHYSP)

HSP 1 Score: 178 bits (451), Expect = 1.180e-50
Identity = 88/176 (50.00%), Postives = 121/176 (68.75%), Query Frame = 1 
Query:    1 DFGSGPQIWIDNLDDAEGTLDVFREFFENERLKKVWHNYSFDRHVLYNHGIDSRGLGGDTMHMARIWDTSRDRASAGGSSSGFSLEALSSSEEVFRGLPNRPPEGRFEKRTMKEIFGRKAIKKDGTEGKLTVVPDVLELQRAEEWREDFIRYSADDAEVTWWLREALEMRLREMSW 528
            D+G+GP +W+DNLD AEGTL +F++F E+    KVWHNYSFDRHVLYNHGI+ +GLGGDTMHMAR+W+T+R +        G+SLEAL++   + R            K+ MKE+FG   ++KDG++GK  ++P V ELQR  E+R+ +IRYS  DAE TW+L   L+ +L +  W
Sbjct:  122 DYGNGPYVWVDNLDSAEGTLQLFKDFLESREYLKVWHNYSFDRHVLYNHGINVQGLGGDTMHMARLWNTARFQHG------GYSLEALTADLLLQR------------KKPMKELFGIPKLRKDGSKGKERIMPTVEELQRFPEFRKRWIRYSVYDAESTWFLHRVLQHKLDQTFW 279
[Close]
BLAST of mRNA_M-pyrifera_M_contig89891.20833.1 vs. uniprot
Match: A0A510EW36_BIGNA (Mitochondria-targeted DNA polymerase n=1 Tax=Bigelowiella natans TaxID=227086 RepID=A0A510EW36_BIGNA)

HSP 1 Score: 183 bits (464), Expect = 1.260e-50
Identity = 94/176 (53.41%), Postives = 125/176 (71.02%), Query Frame = 1 
Query:    1 DFGSGPQIWIDNLDDAEGTLDVFREFFENERLKKVWHNYSFDRHVLYNHGIDSRGLGGDTMHMARIWDTSRDRASAGGSSSGFSLEALSSSEEVFRGLPNRPPEGRFEKRTMKEIFGRKAIKKDGTEGKLTVVPDVLELQRAEEWREDFIRYSADDAEVTWWLREALEMRLREMSW 528
            DFG+GP+++IDNLDDAEGTLD+F+ +FE+ ++KKVWHNY FDRHVL+NHGID +GLGGDTMHMAR+W  SR        S G+SLE+L+++      L N+     ++K  MKE F +K + K+G  GKLT +P + E+QR    R+DFI Y+  DAE TW LR  LE RL+ M+W
Sbjct:  136 DFGNGPKLFIDNLDDAEGTLDLFQNYFEDIQIKKVWHNYGFDRHVLWNHGIDVQGLGGDTMHMARLWHASRPI------SQGYSLESLAAAL-----LGNK-----YKKIPMKERFSKKQLLKNGLPGKLTYLPPIDEIQRDLTLRDDFIDYATQDAETTWQLRNELERRLKLMAW 295
[Close]
BLAST of mRNA_M-pyrifera_M_contig89891.20833.1 vs. uniprot
Match: A0A5D6Y7K7_9STRA (POLAc domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y7K7_9STRA)

HSP 1 Score: 182 bits (462), Expect = 2.070e-50
Identity = 95/176 (53.98%), Postives = 118/176 (67.05%), Query Frame = 1 
Query:    1 DFGSGPQIWIDNLDDAEGTLDVFREFFENERLKKVWHNYSFDRHVLYNHGIDSRGLGGDTMHMARIWDTSRDRASAGGSSSGFSLEALSSSEEVFRGLPNRPPEGRFEKRTMKEIFGRKAIKKDGTEGKLTVVPDVLELQRAEEWREDFIRYSADDAEVTWWLREALEMRLREMSW 528
            DFG+GP +W+DNLD AEGTL+ FREF E+   KKVWHNYSFDRHVL+N GI+ RGLGGDTMHMAR+W+T+R +      + G+SLEALS+   + R            KR MKE+FG   +KKDG+ GK  V+P V ELQR  E+R  +IRYS  DAE TW+L   L  +L    W
Sbjct:  107 DFGNGPYVWVDNLDAAEGTLEYFREFLESTAAKKVWHNYSFDRHVLFNEGINVRGLGGDTMHMARLWNTARFQ------NGGYSLEALSADLLLQR------------KRPMKELFGIPKLKKDGSAGKERVMPSVEELQRFPEFRRRWIRYSVYDAESTWFLHRVLRHKLEATLW 264
[Close]
BLAST of mRNA_M-pyrifera_M_contig89891.20833.1 vs. uniprot
Match: A0A7S3M8M5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M8M5_9STRA)

HSP 1 Score: 169 bits (429), Expect = 3.950e-50
Identity = 84/159 (52.83%), Postives = 109/159 (68.55%), Query Frame = 1 
Query:   52 GTLDVFREFFENERLKKVWHNYSFDRHVLYNHGIDSRGLGGDTMHMARIWDTSRDRASAGGSSSGFSLEALSSSEEVFRGLPNRPPEGRFEKRTMKEIFGRKAIKKDGTEGKLTVVPDVLELQRAEEWREDFIRYSADDAEVTWWLREALEMRLREMSW 528
            G L  F+ +FEN+  KK+WHNY FDRHV++N GID RG GGDTMHMAR+WD+SRD+A+ GG   G+SLEALSS + +F   P   P  +F K +MKE+FG   +KKDG E K+  +PD+  LQ     RE +I YSA DA  TWW+RE +   L++M W
Sbjct:    1 GVLQHFKAWFENDAYKKIWHNYGFDRHVMHNEGIDCRGFGGDTMHMARLWDSSRDKATGGGD--GYSLEALSSDDYLF---PADSPGKKFAKISMKELFGVAKLKKDGGESKIKELPDMRVLQNDPSTREKWIEYSARDAVATWWVREKIVNELKKMPW 154
[Close]
BLAST of mRNA_M-pyrifera_M_contig89891.20833.1 vs. uniprot
Match: A0A662YFE0_9STRA (POLAc domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YFE0_9STRA)

HSP 1 Score: 181 bits (458), Expect = 7.270e-50
Identity = 90/176 (51.14%), Postives = 121/176 (68.75%), Query Frame = 1 
Query:    1 DFGSGPQIWIDNLDDAEGTLDVFREFFENERLKKVWHNYSFDRHVLYNHGIDSRGLGGDTMHMARIWDTSRDRASAGGSSSGFSLEALSSSEEVFRGLPNRPPEGRFEKRTMKEIFGRKAIKKDGTEGKLTVVPDVLELQRAEEWREDFIRYSADDAEVTWWLREALEMRLREMSW 528
            D+G+GP +W+DNLD AEGTL  F+EF E+   +KVWHNYSFDRHVL+NHGID +GLGGDTMHMAR+W+T+R +      + G+SLEAL++   + R            K+ MKE+FG   +KKDG++GK  ++P V ELQR  E+R  +IRYS  DAE TW+L   L+ +L +  W
Sbjct:   86 DYGNGPYVWVDNLDSAEGTLQFFKEFLESREYQKVWHNYSFDRHVLHNHGIDVQGLGGDTMHMARLWNTARFQ------NGGYSLEALTADLLLQR------------KKPMKELFGVPKLKKDGSKGKERLMPSVEELQRFPEFRRRWIRYSVYDAESTWFLHRVLQHKLDQTLW 243
[Close]
BLAST of mRNA_M-pyrifera_M_contig89891.20833.1 vs. uniprot
Match: H3G6G6_PHYRM (POLAc domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=H3G6G6_PHYRM)

HSP 1 Score: 180 bits (456), Expect = 1.120e-49
Identity = 89/176 (50.57%), Postives = 123/176 (69.89%), Query Frame = 1 
Query:    1 DFGSGPQIWIDNLDDAEGTLDVFREFFENERLKKVWHNYSFDRHVLYNHGIDSRGLGGDTMHMARIWDTSRDRASAGGSSSGFSLEALSSSEEVFRGLPNRPPEGRFEKRTMKEIFGRKAIKKDGTEGKLTVVPDVLELQRAEEWREDFIRYSADDAEVTWWLREALEMRLREMSW 528
            D+G+GP +W+DNLD AEGTL  F+ F E+++ +KVWHNYSFDRHVLYNHGI+ +GLGGDTMHMAR+W+T+R +      + G+SLEAL++   + R            K+ MKE+FG   +KKDG++GK  ++P V ELQR  E+R+ +IRYS  DAE TW+L   L+ +L +  W
Sbjct:   60 DYGNGPYVWVDNLDSAEGTLQYFKTFLESKQYRKVWHNYSFDRHVLYNHGINVQGLGGDTMHMARLWNTARFQ------NGGYSLEALTADLLLQR------------KKPMKELFGIPKLKKDGSKGKERLMPSVEELQRFPEFRKRWIRYSVYDAESTWFLHRVLQHKLDQTFW 217
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89891.20833.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
K3X4V6_GLOUD5.300e-5353.98POLAc domain-containing protein n=1 Tax=Globispora... [more]
A0A2D4CD95_PYTIN6.280e-5355.11DNA polymerase I, putative n=1 Tax=Pythium insidio... [more]
A0A8K1C7H2_PYTOL3.660e-5253.98Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S0WY64_9CHLO1.780e-5155.03Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
G4YGY4_PHYSP1.180e-5050.003'-5' exonuclease domain-containing protein n=2 Ta... [more]
A0A510EW36_BIGNA1.260e-5053.41Mitochondria-targeted DNA polymerase n=1 Tax=Bigel... [more]
A0A5D6Y7K7_9STRA2.070e-5053.98POLAc domain-containing protein n=1 Tax=Pythium br... [more]
A0A7S3M8M5_9STRA3.950e-5052.83Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A662YFE0_9STRA7.270e-5051.14POLAc domain-containing protein n=2 Tax=Nothophyto... [more]
H3G6G6_PHYRM1.120e-4950.57POLAc domain-containing protein n=5 Tax=Phytophtho... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89891contigM-pyrifera_M_contig89891:102..797 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score189.1
Seed ortholog evalue1.7e-45
Seed eggNOG ortholog65071.PYU1_T012255
KEGG rclassRC02795
KEGG koko:K02335
KEGG ReactionR00375,R00376,R00377,R00378
KEGG Pathwayko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440
Hectar predicted targeting categoryother localisation
GOsGO:0000002,GO:0003674,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006264,GO:0006725,GO:0006807,GO:0006996,GO:0007005,GO:0008150,GO:0008152,GO:0008409,GO:0009058,GO:0009059,GO:0009507,GO:0009536,GO:0009657,GO:0009987,GO:0016043,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0032042,GO:0033258,GO:0033259,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0071897,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901362,GO:1901576
EggNOG free text desc.DNA polymerase I. Source PGD
EggNOG OGs1MDMP@121069,COG0749@1,KOG0950@2759
EC2.7.7.7
COG Functional cat.L
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03032,ko03400
Exons3
Model size528
Cds size528
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89891.20833.1prot_M-pyrifera_M_contig89891.20833.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig89891 102..797 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816809.54765-CDS-M-pyrifera_M_contig89891:101..1881622816809.54765-CDS-M-pyrifera_M_contig89891:101..188Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89891 102..188 -
1692278191.4390988-CDS-M-pyrifera_M_contig89891:101..1881692278191.4390988-CDS-M-pyrifera_M_contig89891:101..188Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89891 102..188 -
1622816809.560678-CDS-M-pyrifera_M_contig89891:259..6491622816809.560678-CDS-M-pyrifera_M_contig89891:259..649Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89891 260..649 -
1692278191.4581046-CDS-M-pyrifera_M_contig89891:259..6491692278191.4581046-CDS-M-pyrifera_M_contig89891:259..649Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89891 260..649 -
1622816809.5718873-CDS-M-pyrifera_M_contig89891:746..7971622816809.5718873-CDS-M-pyrifera_M_contig89891:746..797Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89891 747..797 -
1692278191.4698067-CDS-M-pyrifera_M_contig89891:746..7971692278191.4698067-CDS-M-pyrifera_M_contig89891:746..797Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89891 747..797 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig89891.20833.1

>prot_M-pyrifera_M_contig89891.20833.1 ID=prot_M-pyrifera_M_contig89891.20833.1|Name=mRNA_M-pyrifera_M_contig89891.20833.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=176bp
DFGSGPQIWIDNLDDAEGTLDVFREFFENERLKKVWHNYSFDRHVLYNHG
IDSRGLGGDTMHMARIWDTSRDRASAGGSSSGFSLEALSSSEEVFRGLPN
RPPEGRFEKRTMKEIFGRKAIKKDGTEGKLTVVPDVLELQRAEEWREDFI
RYSADDAEVTWWLREALEMRLREMSW
back to top

mRNA from alignment at M-pyrifera_M_contig89891:102..797-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig89891.20833.1 ID=mRNA_M-pyrifera_M_contig89891.20833.1|Name=mRNA_M-pyrifera_M_contig89891.20833.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=696bp|location=Sequence derived from alignment at M-pyrifera_M_contig89891:102..797- (Macrocystis pyrifera P11B4 male)
GATTTCGGTTCTGGGCCCCAGATTTGGATCGACAACCTGGACGATGCAGA
GGTGCGTGCGTTTATCGGCGCCCTGCTGGCGCGCCGCTCAGAATCTCGCT
CGTGGCTGACTCTGCTGCCTGTTACGATGTGGACGTCTCAATGTGTAGGG
TACTCTGGATGTTTTCCGTGAGTTTTTCGAGAATGAGCGCCTGAAGAAGG
TGTGGCACAACTACAGCTTCGACAGGCATGTGCTGTACAACCACGGCATT
GACTCTCGTGGGCTGGGTGGTGACACCATGCACATGGCGCGTATATGGGA
CACCAGTCGAGACAGGGCGTCGGCAGGCGGCTCTTCGAGCGGCTTCAGCC
TGGAGGCGTTGTCTAGCAGCGAGGAGGTGTTCCGGGGTCTGCCCAACCGG
CCCCCAGAGGGCAGGTTCGAGAAGCGGACGATGAAGGAGATCTTTGGCCG
CAAGGCTATCAAGAAGGATGGGACGGAGGGGAAACTGACGGTGGTGCCAG
ACGTGCTGGAGCTGCAGCGGGCAGAGGAGTGGAGGGAGGTGGGTGGAGGT
TGTTGCGCGCGGGTGTGCATGTGCGCCGCGTGCTGATGCTGCTGCTGCTC
CTCTGGCAGGACTTTATCCGGTACTCTGCGGATGACGCGGAGGTCACCTG
GTGGCTGCGCGAAGCGCTGGAGATGCGGCTGCGGGAGATGTCGTGG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig89891:102..797-

>mRNA_M-pyrifera_M_contig89891.20833.1 ID=mRNA_M-pyrifera_M_contig89891.20833.1|Name=mRNA_M-pyrifera_M_contig89891.20833.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1056bp|location=Sequence derived from alignment at M-pyrifera_M_contig89891:102..797- (Macrocystis pyrifera P11B4 male)
GATTTCGGTTCTGGGCCCCAGATTTGGATCGACAACCTGGACGATGCAGA
GGATTTCGGTTCTGGGCCCCAGATTTGGATCGACAACCTGGACGATGCAG
AGGGTACTCTGGATGTTTTCCGTGAGTTTTTCGAGAATGAGCGCCTGAAG
AAGGTGTGGCACAACTACAGCTTCGACAGGCATGTGCTGTACAACCACGG
CATTGACTCTCGTGGGCTGGGTGGTGACACCATGCACATGGCGCGTATAT
GGGACACCAGTCGAGACAGGGCGTCGGCAGGCGGCTCTTCGAGCGGCTTC
AGCCTGGAGGCGTTGTCTAGCAGCGAGGAGGTGTTCCGGGGTCTGCCCAA
CCGGCCCCCAGAGGGCAGGTTCGAGAAGCGGACGATGAAGGAGATCTTTG
GCCGCAAGGCTATCAAGAAGGATGGGACGGAGGGGAAACTGACGGTGGTG
CCAGACGTGCTGGAGCTGCAGCGGGCAGAGGAGTGGAGGGAGGGTACTCT
GGATGTTTTCCGTGAGTTTTTCGAGAATGAGCGCCTGAAGAAGGTGTGGC
ACAACTACAGCTTCGACAGGCATGTGCTGTACAACCACGGCATTGACTCT
CGTGGGCTGGGTGGTGACACCATGCACATGGCGCGTATATGGGACACCAG
TCGAGACAGGGCGTCGGCAGGCGGCTCTTCGAGCGGCTTCAGCCTGGAGG
CGTTGTCTAGCAGCGAGGAGGTGTTCCGGGGTCTGCCCAACCGGCCCCCA
GAGGGCAGGTTCGAGAAGCGGACGATGAAGGAGATCTTTGGCCGCAAGGC
TATCAAGAAGGATGGGACGGAGGGGAAACTGACGGTGGTGCCAGACGTGC
TGGAGCTGCAGCGGGCAGAGGAGTGGAGGGAGGACTTTATCCGGTACTCT
GCGGATGACGCGGAGGTCACCTGGTGGCTGCGCGAAGCGCTGGAGATGCG
GCTGCGGGAGATGTCGTGGGACTTTATCCGGTACTCTGCGGATGACGCGG
AGGTCACCTGGTGGCTGCGCGAAGCGCTGGAGATGCGGCTGCGGGAGATG
TCGTGG
back to top