mRNA_M-pyrifera_M_contig89836.20828.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig89836.20828.1 vs. uniprot
Match: A0A3L8E1H4_OOCBI (tRNA-synt_1g domain-containing protein n=1 Tax=Ooceraea biroi TaxID=2015173 RepID=A0A3L8E1H4_OOCBI) HSP 1 Score: 141 bits (355), Expect = 2.460e-36 Identity = 67/132 (50.76%), Postives = 88/132 (66.67%), Query Frame = 1
Query: 25 YLTTPLFYVNSSPHVGHLYSGVVTDALTRALSLFGDTPAVFATGTDEHGAKVATAAAERGVGVGELVDNVSGQFKEVFDAYRLSYSAFIRTTSTEHCDTVEWVWKTLKEKGLLYRSTHSGYYCRSDETFLEE 420
Y+TTP+FYVN+ PH+GHLYS ++ DA+ R S+FG ATGTDEHG KV AAA + E N+S QFKE+ D + + YS FIRTT +HCD V W+ L+E+G +Y +SG+YC SDE FL +
Sbjct: 333 YITTPIFYVNAGPHIGHLYSAILADAVARYNSMFGH-KTFLATGTDEHGNKVKAAAAAASLSNYEYCTNISQQFKEMCDRFEVDYSRFIRTTEKQHCDAVHHFWRLLEERGHIYLGNYSGWYCVSDEAFLSD 463
BLAST of mRNA_M-pyrifera_M_contig89836.20828.1 vs. uniprot
Match: A0A1B6HN03_9HEMI (tRNA-synt_1g domain-containing protein (Fragment) n=1 Tax=Homalodisca liturata TaxID=320908 RepID=A0A1B6HN03_9HEMI) HSP 1 Score: 130 bits (327), Expect = 1.360e-35 Identity = 61/139 (43.88%), Postives = 87/139 (62.59%), Query Frame = 1
Query: 4 SSALRRLYLTTPLFYVNSSPHVGHLYSGVVTDALTRALSLFGDTPAVFATGTDEHGAKVATAAAERGVGVGELVDNVSGQFKEVFDAYRLSYSAFIRTTSTEHCDTVEWVWKTLKEKGLLYRSTHSGYYCRSDETFLEE 420
S+ LR+ ++TTP+FYVNSSPH+GHLY+ ++ DA R L G +F TGTDEHGAK+ AA+ D +S Q+KE+F + ++Y+ FIRTT H V+ W L +G +Y +SG+YC +DE FL +
Sbjct: 28 STNLRKYFITTPIFYVNSSPHIGHLYTALLADAAQRFQQLLGTKDILFMTGTDEHGAKIQQAASNAKAQPKAYCDEISSQYKELFHQFGVNYTHFIRTTDDSHVSAVQHFWNKLVSQGHIYEGQYSGWYCVADEAFLTD 166
BLAST of mRNA_M-pyrifera_M_contig89836.20828.1 vs. uniprot
Match: A0A6A4JHS3_APOLU (tRNA-synt_1g domain-containing protein (Fragment) n=1 Tax=Apolygus lucorum TaxID=248454 RepID=A0A6A4JHS3_APOLU) HSP 1 Score: 129 bits (324), Expect = 2.070e-35 Identity = 63/141 (44.68%), Postives = 89/141 (63.12%), Query Frame = 1
Query: 7 SALRR---LYLTTPLFYVNSSPHVGHLYSGVVTDALTRALSLFGDTPAVFATGTDEHGAKVATAAAERGVGVGELVDNVSGQFKEVFDAYRLSYSAFIRTTSTEHCDTVEWVWKTLKEKGLLYRSTHSGYYCRSDETFLEE 420
S +RR ++TTP++YVN+ PH+GHLY+ ++ DA R L G +F TGTDEHG KV AAA GV + D VS Q+K +FD + YS F+RTT +H + V W W LKE+G + +++G+YC +DE FL +
Sbjct: 15 SVIRRKSDYFITTPIYYVNAEPHIGHLYTSLLADASHRFNLLLGKGNTLFCTGTDEHGTKVQQAAAANGVPPDKYCDFVSSQYKSLFDNMDVDYSHFVRTTDKKHKEKVHWFWNKLKERGHIVPGSYAGWYCDADEMFLTD 155
BLAST of mRNA_M-pyrifera_M_contig89836.20828.1 vs. uniprot
Match: A0A336KJ67_CULSO (Methionine--tRNA ligase, mitochondrial n=2 Tax=Culicoides sonorensis TaxID=179676 RepID=A0A336KJ67_CULSO) HSP 1 Score: 137 bits (345), Expect = 2.560e-35 Identity = 64/133 (48.12%), Postives = 94/133 (70.68%), Query Frame = 1
Query: 25 YLTTPLFYVNSSPHVGHLYSGVVTDALTRALSLFGDTPA-VFATGTDEHGAKVATAAAERGVGVGELVDNVSGQFKEVFDAYRLSYSAFIRTTSTEHCDTVEWVWKTLKEKGLLYRSTHSGYYCRSDETFLEE 420
Y+TTP+FYVN++PH+GHLYS V+TDA++R L +F+TGTDEHG K+ AAA + E D +SG+++++FD + S FIRTT +H ++V+ WK+L +KGL+Y + +SG+YC SDETFL +
Sbjct: 22 YVTTPIFYVNAAPHIGHLYSAVITDAISRFERLVNPNQEFLFSTGTDEHGTKIQQAAALNKISTREYCDTISGKYRKLFDEALIQPSRFIRTTDDDHKNSVQHFWKSLSDKGLIYTTNYSGWYCVSDETFLAD 154
BLAST of mRNA_M-pyrifera_M_contig89836.20828.1 vs. uniprot
Match: A0A1B6CU46_9HEMI (tRNA-synt_1g domain-containing protein n=1 Tax=Clastoptera arizonana TaxID=38151 RepID=A0A1B6CU46_9HEMI) HSP 1 Score: 130 bits (326), Expect = 2.830e-35 Identity = 55/132 (41.67%), Postives = 90/132 (68.18%), Query Frame = 1
Query: 25 YLTTPLFYVNSSPHVGHLYSGVVTDALTRALSLFGDTPAVFATGTDEHGAKVATAAAERGVGVGELVDNVSGQFKEVFDAYRLSYSAFIRTTSTEHCDTVEWVWKTLKEKGLLYRSTHSGYYCRSDETFLEE 420
++TTP+FYVN+SPH+GHLYS ++ DA R L G ++F+TGTDEHG K+ AA + + + D ++ +++ +F + + Y+ FIRTTS EH V+ WK L+ +G ++++ ++G+YC +DE+FL E
Sbjct: 26 FITTPIFYVNASPHIGHLYSALIADAAYRFNYLLGKNCSIFSTGTDEHGLKIQQAANNNKIELSKYCDKIANEYEHLFKKFDIDYTHFIRTTSEEHIAAVQHFWKVLESRGNIFKANYTGWYCTADESFLSE 157
BLAST of mRNA_M-pyrifera_M_contig89836.20828.1 vs. uniprot
Match: A0A836GHZ9_9HYME (Methionine--tRNA ligase, mitochondrial (Fragment) n=3 Tax=Attini TaxID=143999 RepID=A0A836GHZ9_9HYME) HSP 1 Score: 137 bits (344), Expect = 3.170e-35 Identity = 66/130 (50.77%), Postives = 86/130 (66.15%), Query Frame = 1
Query: 25 YLTTPLFYVNSSPHVGHLYSGVVTDALTRALSLFGDTPAVFATGTDEHGAKVATAAAERGVGVGELVDNVSGQFKEVFDAYRLSYSAFIRTTSTEHCDTVEWVWKTLKEKGLLYRSTHSGYYCRSDETFL 414
Y+TTP+FYVN+ PH+GHLYS V+ DA+ R ++ G F TGTDEHG K+ AAA GV E +S QF+E+ D + + YS FIRTT +HCD V WK L+E+G +Y +SG+YC SDE FL
Sbjct: 22 YITTPIFYVNAGPHIGHLYSAVLADAIVRYNNMLGH-QTFFTTGTDEHGNKIKAAAATAGVPNLEYCTRISQQFREMCDKFEVDYSRFIRTTEKQHCDAVYHFWKRLEERGHIYLGKYSGWYCVSDEAFL 150
BLAST of mRNA_M-pyrifera_M_contig89836.20828.1 vs. uniprot
Match: UPI0005EDD6EB (methionine--tRNA ligase, mitochondrial n=1 Tax=Wasmannia auropunctata TaxID=64793 RepID=UPI0005EDD6EB) HSP 1 Score: 137 bits (346), Expect = 3.550e-35 Identity = 67/132 (50.76%), Postives = 87/132 (65.91%), Query Frame = 1
Query: 25 YLTTPLFYVNSSPHVGHLYSGVVTDALTRALSLFGDTPAVFATGTDEHGAKVATAAAERGVGVGELVDNVSGQFKEVFDAYRLSYSAFIRTTSTEHCDTVEWVWKTLKEKGLLYRSTHSGYYCRSDETFLEE 420
Y+TTP+FYVN+ PH+GHLYS V+ DA+ R S+ G FATGTDEHG K+ AAA G+ E +S QFKE+ D + + YS FIRTT +HCD V W+ L E+G +Y +SG+YC SDE FL +
Sbjct: 129 YITTPIFYVNAGPHIGHLYSAVLADAVARYNSMLGH-KTFFATGTDEHGNKIRAAAAAAGLPNLEYCTGISQQFKEMCDRFEVDYSRFIRTTEKQHCDAVYHFWEQLDERGHIYLGKYSGWYCVSDEAFLSD 259
BLAST of mRNA_M-pyrifera_M_contig89836.20828.1 vs. uniprot
Match: B0W122_CULQU (Methionine--tRNA ligase, mitochondrial n=6 Tax=Culex pipiens complex TaxID=518105 RepID=B0W122_CULQU) HSP 1 Score: 136 bits (342), Expect = 6.510e-35 Identity = 62/134 (46.27%), Postives = 90/134 (67.16%), Query Frame = 1
Query: 25 YLTTPLFYVNSSPHVGHLYSGVVTDALTRALSLFGDT--PAVFATGTDEHGAKVATAAAERGVGVGELVDNVSGQFKEVFDAYRLSYSAFIRTTSTEHCDTVEWVWKTLKEKGLLYRSTHSGYYCRSDETFLEE 420
++TTP+FYVN++PH+GHLYS V+ DA+ R L D P++F+TGTDEHG K+ AAA+ V V +S Q++ +F + + YS FIRTT +H D V+ +WK L+ G +Y + +SG+YC DETFL +
Sbjct: 20 FVTTPIFYVNAAPHIGHLYSAVIADAIHRFNGLLNDPSGPSLFSTGTDEHGTKIQQAAAKHSVPVATYCQQISDQYRSLFRDFNVEYSRFIRTTDDDHADAVQSIWKALEASGSIYSAQYSGWYCVPDETFLTD 153
BLAST of mRNA_M-pyrifera_M_contig89836.20828.1 vs. uniprot
Match: A0A8I6RXX2_CIMLE (Methionine--tRNA ligase, mitochondrial n=1 Tax=Cimex lectularius TaxID=79782 RepID=A0A8I6RXX2_CIMLE) HSP 1 Score: 135 bits (341), Expect = 7.690e-35 Identity = 62/132 (46.97%), Postives = 90/132 (68.18%), Query Frame = 1
Query: 25 YLTTPLFYVNSSPHVGHLYSGVVTDALTRALSLFGDTPAVFATGTDEHGAKVATAAAERGVGVGELVDNVSGQFKEVFDAYRLSYSAFIRTTSTEHCDTVEWVWKTLKEKGLLYRSTHSGYYCRSDETFLEE 420
++TTP++YVN+SPH+GHLYS ++ DA R L G VF+TGTDEHG KV AAA G+ + E D +S +++ +FD + + Y+ FIRT+ +H DTV+ WK L +KG + + T+ G+YC +DE FL E
Sbjct: 24 FVTTPIYYVNASPHMGHLYSSLLADAYYRFQLLLGHKEGVFSTGTDEHGIKVQQAAAASGLPLLEYCDKISAEYRNLFDEFAIGYNQFIRTSDQKHKDTVQHYWKILDKKGYIRKGTYKGWYCDADEAFLTE 155
BLAST of mRNA_M-pyrifera_M_contig89836.20828.1 vs. uniprot
Match: UPI0017473410 (methionine--tRNA ligase, mitochondrial n=1 Tax=Monomorium pharaonis TaxID=307658 RepID=UPI0017473410) HSP 1 Score: 136 bits (343), Expect = 8.980e-35 Identity = 64/132 (48.48%), Postives = 87/132 (65.91%), Query Frame = 1
Query: 25 YLTTPLFYVNSSPHVGHLYSGVVTDALTRALSLFGDTPAVFATGTDEHGAKVATAAAERGVGVGELVDNVSGQFKEVFDAYRLSYSAFIRTTSTEHCDTVEWVWKTLKEKGLLYRSTHSGYYCRSDETFLEE 420
Y+TTP+FYVN+ PH+GHLYS V+ DA+ R ++ G F TGTDEHG K+ AAA G+ E +S QF+++ D + + YS FIRTT HCD V + WK L+E+G +Y +SG+YC SDE FL +
Sbjct: 123 YITTPIFYVNAGPHIGHLYSAVLADAVARYNNMLGH-KTFFTTGTDEHGNKIKAAAAAAGLPNLEYCTKISQQFRKMCDRFEVDYSCFIRTTEKRHCDAVYYFWKLLEERGYIYLGKYSGWYCVSDEAFLSD 253 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89836.20828.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig89836.20828.1 >prot_M-pyrifera_M_contig89836.20828.1 ID=prot_M-pyrifera_M_contig89836.20828.1|Name=mRNA_M-pyrifera_M_contig89836.20828.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=140bp MSSALRRLYLTTPLFYVNSSPHVGHLYSGVVTDALTRALSLFGDTPAVFAback to top mRNA from alignment at M-pyrifera_M_contig89836:2..421- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig89836.20828.1 ID=mRNA_M-pyrifera_M_contig89836.20828.1|Name=mRNA_M-pyrifera_M_contig89836.20828.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=420bp|location=Sequence derived from alignment at M-pyrifera_M_contig89836:2..421- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig89836:2..421- >mRNA_M-pyrifera_M_contig89836.20828.1 ID=mRNA_M-pyrifera_M_contig89836.20828.1|Name=mRNA_M-pyrifera_M_contig89836.20828.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=840bp|location=Sequence derived from alignment at M-pyrifera_M_contig89836:2..421- (Macrocystis pyrifera P11B4 male)back to top |