mRNA_M-pyrifera_M_contig89819.20822.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig89819.20822.1
Unique NamemRNA_M-pyrifera_M_contig89819.20822.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Match: A0A6G0I0H0_LARCR (Helicase C-terminal domain-containing protein n=5 Tax=Percomorphaceae TaxID=1489872 RepID=A0A6G0I0H0_LARCR)

HSP 1 Score: 243 bits (621), Expect = 1.070e-73
Identity = 122/217 (56.22%), Postives = 168/217 (77.42%), Query Frame = 1 
Query:    1 LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTLSAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSAFHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTEQLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGRIVRIRDQDVDWGWGVVL 651
            LKE +EILF E L+K LFATETFAMGINMPA+TV+FTS+RKFDG  HR +++GEYIQMSGRAGRRG+DDRGIVI M D KM P   KQLL+G+ADPLNSAFHL YNM+LNL RV++   +PE MLE+SF+QFQ  +A P + + +K+  EQ  A+  +IP+  ++V++  + ++  ++   +++  + P  CL FL+PGR+V++++ DVD+GWGVV+
Sbjct:   50 LKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKNHRFITSGEYIQMSGRAGRRGMDDRGIVIFMVDEKMSPAVGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEI--NPEYMLEKSFYQFQHYRALPGVVEKIKKYEEQYHAI--EIPNEESVVTYFKIRQQLAKLGKEIQEFVHKPKYCLPFLQPGRLVKVKNDDVDFGWGVVV 262
[Close]
BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Match: UPI00105540D7 (exosome RNA helicase MTR4 n=1 Tax=Gouania willdenowi TaxID=441366 RepID=UPI00105540D7)

HSP 1 Score: 241 bits (615), Expect = 5.090e-72
Identity = 121/217 (55.76%), Postives = 167/217 (76.96%), Query Frame = 1 
Query:    1 LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTLSAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSAFHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTEQLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGRIVRIRDQDVDWGWGVVL 651
            LKE +EILF E L+K LFATETFAMGINMPA+TV+FTS+RKFDG  HR +++GEYIQMSGRAGRRG+DDRGIVI M D KM P   KQLL+G+ADPLNSAFHL YNM+LNL RV++   +PE MLE+SF+QFQ  +A P + + +K+  EQ  A+  +IP+  ++V++  + ++  ++   + +  + P  CL FL+PGR+V+++++D D+GWGVV+
Sbjct:  460 LKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKNHRFITSGEYIQMSGRAGRRGMDDRGIVIFMVDEKMSPAIGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEI--NPEYMLEKSFYQFQHYRALPGVVEKIKKLEEQYHAI--EIPNEESVVAYFKIRQQLAKLGKEILEFIHKPKYCLPFLQPGRLVKVKNEDADFGWGVVV 672
[Close]
BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Match: A0A3P8WWQ2_CYNSE (Mtr4 exosome RNA helicase n=1 Tax=Cynoglossus semilaevis TaxID=244447 RepID=A0A3P8WWQ2_CYNSE)

HSP 1 Score: 245 bits (626), Expect = 5.930e-72
Identity = 121/217 (55.76%), Postives = 169/217 (77.88%), Query Frame = 1 
Query:    1 LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTLSAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSAFHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTEQLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGRIVRIRDQDVDWGWGVVL 651
            LKE +EILF E L+K LFATETFAMGINMPA+TV+FTS+RKFDG  HR +++GEYIQMSGRAGRRG+DDRGIVI M D KM P   KQLL+G+ADPLNSAFHL YNM+LNL RV++   +PE MLE+SF+QFQ  +A P + + +K+  EQ  ++  +IP+  +++++  + ++  ++   +++  N P  CL FL+PGR+V++R+QD+D+GWG+V+
Sbjct:  453 LKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKNHRFITSGEYIQMSGRAGRRGMDDRGIVIFMVDEKMSPAVGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEI--NPEYMLEKSFYQFQHYRALPGVVEKIKKLEEQYHSI--EIPNEESVITYFKIRQQLAKLAKDIQEFINKPKYCLPFLQPGRLVKVRNQDLDFGWGIVV 665
[Close]
BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Match: A0A087XC50_POEFO (Mtr4 exosome RNA helicase n=2 Tax=Poecilia formosa TaxID=48698 RepID=A0A087XC50_POEFO)

HSP 1 Score: 239 bits (611), Expect = 5.240e-71
Identity = 119/217 (54.84%), Postives = 167/217 (76.96%), Query Frame = 1 
Query:    1 LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTLSAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSAFHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTEQLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGRIVRIRDQDVDWGWGVVL 651
            LKE +EILF E L+K LFATETFAMGINMPA+TV+FTS+RKFDG  HR +++GEYIQMSGRAGRRG+DDRGIVI M D KM P   KQLL+G+ADPLNSAFHL YNM+LNL RV++   +PE MLE+SF+QFQ  +A P + + +K+  +Q   +  +IP+  ++V++  + ++  ++   +++  + P  CL FL+PGR+V+++++D D+GWGVV+
Sbjct:  209 LKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKNHRFITSGEYIQMSGRAGRRGMDDRGIVIFMVDEKMSPAVGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEI--NPEYMLEKSFYQFQHYRALPGVVEKIKKLEDQYHTI--EIPNEESVVTYFKIRQQLAKLGKEIQEFIHKPKYCLPFLQPGRLVKVKNEDTDFGWGVVV 421
[Close]
BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Match: A0A3Q0SCM6_AMPCI (Mtr4 exosome RNA helicase n=1 Tax=Amphilophus citrinellus TaxID=61819 RepID=A0A3Q0SCM6_AMPCI)

HSP 1 Score: 242 bits (617), Expect = 8.080e-71
Identity = 121/217 (55.76%), Postives = 167/217 (76.96%), Query Frame = 1 
Query:    1 LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTLSAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSAFHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTEQLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGRIVRIRDQDVDWGWGVVL 651
            LKE +EILF E L+K LFATETFAMGINMPA+TV+FTS+RKFDG  HR +++GEYIQMSGRAGRRG+DDRGIVI M D KM P   KQLL+G+ADPLNSAFHL YNM+LNL RV++   +PE MLE+SF+QFQ  +A P + + +K+  EQ   +  +IP+   +V++  + ++  ++   +++  + P  CL FL+PGR+V+++++DVD+GWGVV+
Sbjct:  418 LKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKNHRFITSGEYIQMSGRAGRRGMDDRGIVIFMVDEKMSPAVGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEI--NPEYMLEKSFYQFQHYRALPGVVEKIKKLEEQYHTI--EIPNEENVVTYFKIRQQLAKLGKDIQEFIHKPKYCLPFLQPGRLVKVKNEDVDFGWGVVV 630
[Close]
BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Match: A0A3Q3MWB7_9LABR (Mtr4 exosome RNA helicase n=23 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3Q3MWB7_9LABR)

HSP 1 Score: 242 bits (618), Expect = 8.210e-71
Identity = 121/217 (55.76%), Postives = 168/217 (77.42%), Query Frame = 1 
Query:    1 LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTLSAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSAFHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTEQLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGRIVRIRDQDVDWGWGVVL 651
            LKE +EILF E L+K LFATETFAMGINMPA+TV+FTS+RKFDG +HR +++GEYIQMSGRAGRRG+DDRGIVI M D KM P   KQLL+G+ADPLNSAFHL YNM+LNL RV++   +PE MLE+SF+QFQ  +A P + + +K+  EQ  A+  +IP+   +V++  + ++  ++   +++  + P  CL FL+PGR+V+++++D D+GWGVV+
Sbjct:  459 LKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKSHRFITSGEYIQMSGRAGRRGMDDRGIVIFMVDEKMSPAIGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEI--NPEYMLEKSFYQFQHYRALPGVVEKIKKYEEQYHAI--EIPNEEGVVTYFKIRQQLAKLGKEIQEFTHKPKYCLPFLQPGRLVKVKNEDADFGWGVVV 671
[Close]
BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Match: A0A667YWA3_9TELE (Mtr4 exosome RNA helicase n=2 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667YWA3_9TELE)

HSP 1 Score: 242 bits (617), Expect = 8.930e-71
Identity = 122/217 (56.22%), Postives = 167/217 (76.96%), Query Frame = 1 
Query:    1 LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTLSAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSAFHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTEQLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGRIVRIRDQDVDWGWGVVL 651
            LKE +EILF E L+K LFATETFAMGINMPA+TV+FTS+RKFDG  HR +++GEYIQMSGRAGRRG+D RGIVI M D KM P   KQLL+G+ADPLNSAFHL YNM+LNL RV++   +PE MLE+SF+QFQ  +A P + + +K+  EQ  A+  +IP+  ++VS+  + ++  R+   +++  + P  CL FL+PGR+V+++++D D+GWGVV+
Sbjct:  430 LKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKNHRFITSGEYIQMSGRAGRRGMDKRGIVIFMVDEKMSPAVGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEI--NPEYMLEKSFYQFQHYRALPGVVEKIKKLEEQYHAI--EIPNEESVVSYYKIRQQLARLGKEIQEFIHKPKYCLPFLQPGRLVKVKNEDADFGWGVVV 642
[Close]
BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Match: A0A3Q3CKI2_HAPBU (Mtr4 exosome RNA helicase n=4 Tax=Haplochromini TaxID=319058 RepID=A0A3Q3CKI2_HAPBU)

HSP 1 Score: 241 bits (616), Expect = 1.200e-70
Identity = 120/217 (55.30%), Postives = 167/217 (76.96%), Query Frame = 1 
Query:    1 LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTLSAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSAFHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTEQLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGRIVRIRDQDVDWGWGVVL 651
            LKE +EILF E L+K LFATETFAMGINMPA+TV+FTS+RKFDG  HR +++GEYIQMSGRAGRRG+DDRGIVI M D KM P   KQLL+G+ADPLNSAFHL YNM+LNL RV++   +PE MLE+SF+QFQ  +A P + + +K+  EQ   +  +IP+  ++V++  + ++  ++   +++  + P  CL FL+PGR+V+++++D D+GWGVV+
Sbjct:  434 LKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKNHRFITSGEYIQMSGRAGRRGMDDRGIVIFMVDEKMSPAVGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEI--NPEYMLEKSFYQFQHYRALPGVVEKIKKLEEQYHTI--EIPNEESVVTYFKIRQQLAKLSKEIQEFIHKPKYCLPFLQPGRLVKVKNEDADFGWGVVM 646
[Close]
BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Match: A0A3B5A4B2_9TELE (Mtr4 exosome RNA helicase n=1 Tax=Stegastes partitus TaxID=144197 RepID=A0A3B5A4B2_9TELE)

HSP 1 Score: 241 bits (616), Expect = 1.230e-70
Identity = 120/217 (55.30%), Postives = 169/217 (77.88%), Query Frame = 1 
Query:    1 LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTLSAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSAFHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTEQLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGRIVRIRDQDVDWGWGVVL 651
            LKE +EILF E L+K LFATETFAMGINMPA+TV+FTS+RKFDG +HR +++GEYIQMSGRAGRRG+DDRGIVI M D KM P   KQLL+G+ADPLNSAFHL YNM+LNL RV++   +PE MLE+SF+QFQ  +A P + + +K+  EQ V +  +IP+  ++V++  + ++  ++   +++  + P  CL FL+PGR+V++++++ D+GWGVV+
Sbjct:  429 LKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKSHRFITSGEYIQMSGRAGRRGMDDRGIVIFMVDEKMSPAVGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEI--NPEYMLEKSFYQFQHYRALPGVVEKIKKLEEQYVNI--EIPNEESVVTYFKIRQQLAKLGKEIQEFIHKPKYCLPFLQPGRLVKVKNEEADFGWGVVV 641
[Close]
BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Match: A0A673C7S6_9TELE (Mtr4 exosome RNA helicase n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673C7S6_9TELE)

HSP 1 Score: 241 bits (615), Expect = 1.370e-70
Identity = 121/217 (55.76%), Postives = 167/217 (76.96%), Query Frame = 1 
Query:    1 LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTLSAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSAFHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTEQLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGRIVRIRDQDVDWGWGVVL 651
            LKE +EILF E L+K LFATETFAMGINMPA+TV+FTS+RKFDG  HR +++GEYIQMSGRAGRRG+DDRGIVI M D KM P   KQLL+G+ADPLNSAFHL YNM+LNL RV++   +PE MLE+SF+QFQ  +A P + + +K+  EQ   +  DIP+  ++V++  + ++  ++   +++  + P  CL FL+PGR+V+++++D D+GWGVV+
Sbjct:  402 LKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKNHRFITSGEYIQMSGRAGRRGMDDRGIVIFMVDEKMSPAVGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEI--NPEYMLEKSFYQFQHYRALPGVVEKIKKLEEQYHKI--DIPNEESVVTYFKIRQQLAKLGKDIQEFIHKPKHCLPFLQPGRLVKVKNEDADFGWGVVV 614
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G0I0H0_LARCR1.070e-7356.22Helicase C-terminal domain-containing protein n=5 ... [more]
UPI00105540D75.090e-7255.76exosome RNA helicase MTR4 n=1 Tax=Gouania willdeno... [more]
A0A3P8WWQ2_CYNSE5.930e-7255.76Mtr4 exosome RNA helicase n=1 Tax=Cynoglossus semi... [more]
A0A087XC50_POEFO5.240e-7154.84Mtr4 exosome RNA helicase n=2 Tax=Poecilia formosa... [more]
A0A3Q0SCM6_AMPCI8.080e-7155.76Mtr4 exosome RNA helicase n=1 Tax=Amphilophus citr... [more]
A0A3Q3MWB7_9LABR8.210e-7155.76Mtr4 exosome RNA helicase n=23 Tax=Percomorphaceae... [more]
A0A667YWA3_9TELE8.930e-7156.22Mtr4 exosome RNA helicase n=2 Tax=Myripristis murd... [more]
A0A3Q3CKI2_HAPBU1.200e-7055.30Mtr4 exosome RNA helicase n=4 Tax=Haplochromini Ta... [more]
A0A3B5A4B2_9TELE1.230e-7055.30Mtr4 exosome RNA helicase n=1 Tax=Stegastes partit... [more]
A0A673C7S6_9TELE1.370e-7055.76Mtr4 exosome RNA helicase n=1 Tax=Sphaeramia orbic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89819contigM-pyrifera_M_contig89819:2..652 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score246.5
Seed ortholog evalue1.1e-62
Seed eggNOG ortholog244447.XP_008324257.1
Preferred nameSKIV2L2
KEGG koko:K12598
KEGG Pathwayko03018,map03018
KEGG ModuleM00393
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000398,GO:0000460,GO:0002252,GO:0002376,GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0006139,GO:0006364,GO:0006396,GO:0006397,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0008380,GO:0009056,GO:0009057,GO:0009605,GO:0009607,GO:0009615,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016072,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019439,GO:0022613,GO:0031499,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0042254,GO:0042623,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051607,GO:0051704,GO:0051707,GO:0070013,GO:0070035,GO:0071013,GO:0071704,GO:0071840,GO:0090304,GO:0098542,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1902494,GO:1990904
EggNOG free text desc.superkiller viralicidic activity 2-like 2
EggNOG OGs38Y04@33154,3BBAD@33208,3CRCJ@33213,482NG@7711,48YK4@7742,4A0TA@7898,COG4581@1,KOG0948@2759
EC3.6.4.13
COG Functional cat.A
Best tax levelActinopterygii
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03009,ko03016,ko03019,ko03041
Exons1
Model size651
Cds size651
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816809.156384-CDS-M-pyrifera_M_contig89819:1..6521622816809.156384-CDS-M-pyrifera_M_contig89819:1..652Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89819 2..652 +
1692278191.2389529-CDS-M-pyrifera_M_contig89819:1..6521692278191.2389529-CDS-M-pyrifera_M_contig89819:1..652Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89819 2..652 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89819.20822.1prot_M-pyrifera_M_contig89819.20822.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig89819 2..652 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig89819.20822.1

>prot_M-pyrifera_M_contig89819.20822.1 ID=prot_M-pyrifera_M_contig89819.20822.1|Name=mRNA_M-pyrifera_M_contig89819.20822.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=217bp
LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTL
SAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSA
FHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTE
QLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGR
IVRIRDQDVDWGWGVVL
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mRNA from alignment at M-pyrifera_M_contig89819:2..652+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig89819.20822.1 ID=mRNA_M-pyrifera_M_contig89819.20822.1|Name=mRNA_M-pyrifera_M_contig89819.20822.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=651bp|location=Sequence derived from alignment at M-pyrifera_M_contig89819:2..652+ (Macrocystis pyrifera P11B4 male)
CTCAAGGAAGTTGTGGAAATCCTCTTCGGAGAATCCCTCGTCAAGGTGCT
GTTTGCCACAGAGACCTTTGCGATGGGAATCAACATGCCTGCCAAAACGG
TCATCTTCACATCGTCGAGGAAGTTTGATGGTGTCACTCATCGCACTCTC
TCCGCGGGAGAGTACATCCAAATGAGTGGTCGCGCTGGTCGTCGTGGTCT
TGATGACCGGGGGATCGTGATCTTGATGACGGATTCCAAGATGGAACCAA
CGGATGCCAAGCAGTTGTTACGGGGGACGGCAGATCCTCTCAATTCCGCA
TTCCACCTTGGCTACAACATGTTGCTCAATCTTACAAGAGTTCAGGATGC
TGGTGCTGATCCAGAGTCCATGTTGGAGCGCTCGTTCCATCAGTTCCAAG
CCAGGCAAGCGCGGCCAGCGATGGAGAAAGCGCTCAAGGAGAAGACAGAA
CAACTCGTCGCGGTGTCCAAGGATATTCCAGACCTTGCAACACTCGTATC
ATTTGATGCTTTGTTGCGGGAAGGAAGGAGGGTGAGGGATTCAATGCGTC
AACTGGAGAATTCACCAAACGTTTGTCTGCGCTTCCTCAAGCCTGGGCGC
ATTGTCCGTATCCGCGATCAAGATGTGGATTGGGGATGGGGAGTAGTGTT
G
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig89819:2..652+

>mRNA_M-pyrifera_M_contig89819.20822.1 ID=mRNA_M-pyrifera_M_contig89819.20822.1|Name=mRNA_M-pyrifera_M_contig89819.20822.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1302bp|location=Sequence derived from alignment at M-pyrifera_M_contig89819:2..652+ (Macrocystis pyrifera P11B4 male)
CTCAAGGAAGTTGTGGAAATCCTCTTCGGAGAATCCCTCGTCAAGGTGCT
GTTTGCCACAGAGACCTTTGCGATGGGAATCAACATGCCTGCCAAAACGG
TCATCTTCACATCGTCGAGGAAGTTTGATGGTGTCACTCATCGCACTCTC
TCCGCGGGAGAGTACATCCAAATGAGTGGTCGCGCTGGTCGTCGTGGTCT
TGATGACCGGGGGATCGTGATCTTGATGACGGATTCCAAGATGGAACCAA
CGGATGCCAAGCAGTTGTTACGGGGGACGGCAGATCCTCTCAATTCCGCA
TTCCACCTTGGCTACAACATGTTGCTCAATCTTACAAGAGTTCAGGATGC
TGGTGCTGATCCAGAGTCCATGTTGGAGCGCTCGTTCCATCAGTTCCAAG
CCAGGCAAGCGCGGCCAGCGATGGAGAAAGCGCTCAAGGAGAAGACAGAA
CAACTCGTCGCGGTGTCCAAGGATATTCCAGACCTTGCAACACTCGTATC
ATTTGATGCTTTGTTGCGGGAAGGAAGGAGGGTGAGGGATTCAATGCGTC
AACTGGAGAATTCACCAAACGTTTGTCTGCGCTTCCTCAAGCCTGGGCGC
ATTGTCCGTATCCGCGATCAAGATGTGGATTGGGGATGGGGAGTAGTGTT
GCTCAAGGAAGTTGTGGAAATCCTCTTCGGAGAATCCCTCGTCAAGGTGC
TGTTTGCCACAGAGACCTTTGCGATGGGAATCAACATGCCTGCCAAAACG
GTCATCTTCACATCGTCGAGGAAGTTTGATGGTGTCACTCATCGCACTCT
CTCCGCGGGAGAGTACATCCAAATGAGTGGTCGCGCTGGTCGTCGTGGTC
TTGATGACCGGGGGATCGTGATCTTGATGACGGATTCCAAGATGGAACCA
ACGGATGCCAAGCAGTTGTTACGGGGGACGGCAGATCCTCTCAATTCCGC
ATTCCACCTTGGCTACAACATGTTGCTCAATCTTACAAGAGTTCAGGATG
CTGGTGCTGATCCAGAGTCCATGTTGGAGCGCTCGTTCCATCAGTTCCAA
GCCAGGCAAGCGCGGCCAGCGATGGAGAAAGCGCTCAAGGAGAAGACAGA
ACAACTCGTCGCGGTGTCCAAGGATATTCCAGACCTTGCAACACTCGTAT
CATTTGATGCTTTGTTGCGGGAAGGAAGGAGGGTGAGGGATTCAATGCGT
CAACTGGAGAATTCACCAAACGTTTGTCTGCGCTTCCTCAAGCCTGGGCG
CATTGTCCGTATCCGCGATCAAGATGTGGATTGGGGATGGGGAGTAGTGT
TG
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