mRNA_M-pyrifera_M_contig89780.20812.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig89780.20812.1 vs. uniprot
Match: A0A0N7F2B4_9BACT (Uncharacterized protein n=1 Tax=uncultured bacterium 5G12 TaxID=1701325 RepID=A0A0N7F2B4_9BACT) HSP 1 Score: 106 bits (264), Expect = 4.180e-28 Identity = 56/82 (68.29%), Postives = 61/82 (74.39%), Query Frame = 1 Query: 13 SSQLTAVYNPKAFIPHAASLGQAFAHCRRFSTAAIRRCLGSVSVPVSRVMLSHPVAIVALVGRYPANKLIARGPILRRNHTI 258 SS L VYNPKAF PHAASL QAFAHC RF TAA RR LG VSVPV ++LS + IVALVGRYP NKLI RGP+L R + Sbjct: 3 SSFLKGVYNPKAFFPHAASLRQAFAHCARFPTAASRRSLGRVSVPVWLIVLSDQLRIVALVGRYPTNKLIRRGPVLGRRPKL 84
BLAST of mRNA_M-pyrifera_M_contig89780.20812.1 vs. uniprot
Match: A0A2S2PI09_SCHGA (Uncharacterized protein (Fragment) n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2PI09_SCHGA) HSP 1 Score: 95.1 bits (235), Expect = 1.690e-23 Identity = 52/80 (65.00%), Postives = 56/80 (70.00%), Query Frame = 1 Query: 7 RISSQLTAVYNPKAFIPHAASLGQAFAHCRRFSTAAIRRCLGSVSVPVSRVMLSHPVAIVALVGRYPANKLIARGPILRR 246 + SS VYNPKA IPHAASL QA AHC F TAA RR LG +SVPV V LS + +VALVG YP NKLI RGPIL R Sbjct: 9 KASSLAKGVYNPKAVIPHAASLHQASAHCAIFPTAASRRSLGRISVPVWPVTLSGRLPVVALVGHYPTNKLIGRGPILNR 88
BLAST of mRNA_M-pyrifera_M_contig89780.20812.1 vs. uniprot
Match: A0A2R5L649_9ACAR (Uncharacterized protein (Fragment) n=1 Tax=Ornithodoros turicata TaxID=34597 RepID=A0A2R5L649_9ACAR) HSP 1 Score: 92.8 bits (229), Expect = 2.790e-22 Identity = 52/80 (65.00%), Postives = 55/80 (68.75%), Query Frame = 1 Query: 13 SSQLTAVYNPKAFIPHAASLGQAFAHCRRFSTAAIRRCLGSVSVPVSRVMLSHPVAIVALVGRYPANKLIARGPILRRNH 252 SS L AVYNPKA IPHAASL Q F HC F TAA RR LG VSVPV V LS + +VALVG YP NKLI R PI R + Sbjct: 26 SSLLKAVYNPKAVIPHAASLHQGFPHCAIFPTAASRRSLGRVSVPVWPVALSGRLPVVALVGHYPTNKLIGREPIPNRKN 105
BLAST of mRNA_M-pyrifera_M_contig89780.20812.1 vs. uniprot
Match: A0A087E900_9BIFI (PG1 protein n=1 Tax=Bifidobacterium thermacidophilum subsp. thermacidophilum TaxID=79262 RepID=A0A087E900_9BIFI) HSP 1 Score: 91.7 bits (226), Expect = 9.060e-22 Identity = 52/82 (63.41%), Postives = 57/82 (69.51%), Query Frame = 1 Query: 1 PYRISSQLTAVYNPKAFIPHAASLGQAFAHCRRFSTAAIRRCLGSVSVPVSRVMLSHPVAIVALVGRYPANKLIARGPILRR 246 P R SQ AVYNPKA IPHAASL QA AHC F TAA RR LG +SVP+ V LS + + ALVG +PANKLI R PI RR Sbjct: 9 PRRACSQTKAVYNPKASIPHAASLHQACAHCAIFPTAASRRSLGRISVPMWPVALSGRLPVEALVGPHPANKLIGRDPIPRR 90
BLAST of mRNA_M-pyrifera_M_contig89780.20812.1 vs. uniprot
Match: A0A2M4CU86_ANODA (Hipothetical protein (Fragment) n=1 Tax=Anopheles darlingi TaxID=43151 RepID=A0A2M4CU86_ANODA) HSP 1 Score: 91.3 bits (225), Expect = 1.160e-21 Identity = 51/76 (67.11%), Postives = 54/76 (71.05%), Query Frame = 1 Query: 13 SSQLTAVYNPKAFIPHAASLGQAFAHCRRFSTAAIRRCLGSVSVPVSRVMLSHPVAIVALVGRYPANKLIARGPIL 240 SS+ VYNPKA IPHAASL QAFAHC F TAA RR LG VSVPV LS + +VALVG YP NKLI RG IL Sbjct: 46 SSRSKGVYNPKAVIPHAASLHQAFAHCAIFPTAASRRSLGRVSVPVWPFALSGRLPVVALVGHYPTNKLIGRGLIL 121
BLAST of mRNA_M-pyrifera_M_contig89780.20812.1 vs. uniprot
Match: A0A6B2EK14_9DIPT (Uncharacterized protein (Fragment) n=1 Tax=Phlebotomus kandelakii TaxID=1109342 RepID=A0A6B2EK14_9DIPT) HSP 1 Score: 89.4 bits (220), Expect = 2.190e-21 Identity = 49/75 (65.33%), Postives = 54/75 (72.00%), Query Frame = 1 Query: 13 SSQLTAVYNPKAFIPHAASLGQAFAHCRRFSTAAIRRCLGSVSVPVSRVMLSHPVAIVALVGRYPANKLIARGPI 237 SS L +YNPKAFI HAA L QA AHC RF TAA RR LG VSVPV ++LS+ + IV LVG YP N LI RGPI Sbjct: 23 SSPLKELYNPKAFIAHAAWLDQACAHCLRFPTAASRRSLGRVSVPVWLIILSNQLWIVGLVGHYPTNYLIQRGPI 97
BLAST of mRNA_M-pyrifera_M_contig89780.20812.1 vs. uniprot
Match: A0A1N0XQZ7_9MYCO (Uncharacterized protein n=1 Tax=Mycobacteroides abscessus subsp. abscessus TaxID=1185650 RepID=A0A1N0XQZ7_9MYCO) HSP 1 Score: 89.7 bits (221), Expect = 5.030e-21 Identity = 51/78 (65.38%), Postives = 54/78 (69.23%), Query Frame = 1 Query: 13 SSQLTAVYNPKAFIPHAASLGQAFAHCRRFSTAAIRRCLGSVSVPVSRVMLSHPVAIVALVGRYPANKLIARGPILRR 246 SS L VYNPKA IPHAASL QA AHC F TAA RR LG +SVPV V LS + +VALVG YP NKLI RG I R Sbjct: 14 SSLLKEVYNPKAVIPHAASLHQACAHCAIFPTAASRRSLGRISVPVWPVTLSGRLPVVALVGHYPTNKLIGRGLIPHR 91
BLAST of mRNA_M-pyrifera_M_contig89780.20812.1 vs. uniprot
Match: S4WB24_9BACT (Uncharacterized protein n=1 Tax=uncultured bacterium FPPP_33K14 TaxID=1343846 RepID=S4WB24_9BACT) HSP 1 Score: 88.6 bits (218), Expect = 1.130e-20 Identity = 46/81 (56.79%), Postives = 57/81 (70.37%), Query Frame = 1 Query: 1 PYRISSQLTAVYNPKAFIPHAASLGQAFAHCRRFSTAAIRRCLGSVSVPVSRVMLSHPVAIVALVGRYPANKLIARGPILR 243 P SS T +Y P++FI HAA L QAFAHC +F TAA RR LG +S+PV ++LS + I+ALVG YP NKLI R PIL+ Sbjct: 35 PPNFSSLTTDLYAPRSFIDHAALLRQAFAHCAKFPTAAPRRGLGRISIPVWLIILSDQLPIIALVGHYPTNKLIGRRPILK 115
BLAST of mRNA_M-pyrifera_M_contig89780.20812.1 vs. uniprot
Match: A0A1X3A2F6_BIFAD (PG1 protein (Fragment) n=2 Tax=Bifidobacterium adolescentis TaxID=1680 RepID=A0A1X3A2F6_BIFAD) HSP 1 Score: 89.4 bits (220), Expect = 1.240e-20 Identity = 50/79 (63.29%), Postives = 55/79 (69.62%), Query Frame = 1 Query: 1 PYRISSQLTAVYNPKAFIPHAASLGQAFAHCRRFSTAAIRRCLGSVSVPVSRVMLSHPVAIVALVGRYPANKLIARGPI 237 P R SQ AVYNPKA IPHAASL QA AHC F TAA RR LG +SVP+ V LS + + A+VGRYPA KLI R PI Sbjct: 4 PRRACSQSKAVYNPKAVIPHAASLHQACAHCAIFPTAASRRSLGRISVPMWPVALSGRLPVEAMVGRYPAIKLIGRDPI 82
BLAST of mRNA_M-pyrifera_M_contig89780.20812.1 vs. uniprot
Match: E4XWU9_OIKDI (Uncharacterized protein n=1 Tax=Oikopleura dioica TaxID=34765 RepID=E4XWU9_OIKDI) HSP 1 Score: 86.7 bits (213), Expect = 4.710e-20 Identity = 44/68 (64.71%), Postives = 52/68 (76.47%), Query Frame = 1 Query: 10 ISSQLTAVYNPKAFIPHAASLGQAFAHCRRFSTAAIRRCLGSVSVPVSRVMLSHPVAIVALVGRYPAN 213 + S++T VY PK FIPHAASL QA AHC +FSTAA RRCL VSVPV V+LS + ++ALVG YPAN Sbjct: 56 LCSRMTGVYEPKPFIPHAASLHQACAHCEKFSTAATRRCLDRVSVPVWLVVLSDQLPVLALVGFYPAN 123 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89780.20812.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig89780.20812.1 >prot_M-pyrifera_M_contig89780.20812.1 ID=prot_M-pyrifera_M_contig89780.20812.1|Name=mRNA_M-pyrifera_M_contig89780.20812.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=87bp PYRISSQLTAVYNPKAFIPHAASLGQAFAHCRRFSTAAIRRCLGSVSVPVback to top mRNA from alignment at M-pyrifera_M_contig89780:413..673+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig89780.20812.1 ID=mRNA_M-pyrifera_M_contig89780.20812.1|Name=mRNA_M-pyrifera_M_contig89780.20812.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=261bp|location=Sequence derived from alignment at M-pyrifera_M_contig89780:413..673+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig89780:413..673+ >mRNA_M-pyrifera_M_contig89780.20812.1 ID=mRNA_M-pyrifera_M_contig89780.20812.1|Name=mRNA_M-pyrifera_M_contig89780.20812.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=522bp|location=Sequence derived from alignment at M-pyrifera_M_contig89780:413..673+ (Macrocystis pyrifera P11B4 male)back to top |