mRNA_M-pyrifera_M_contig89772.20808.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig89772.20808.1
Unique NamemRNA_M-pyrifera_M_contig89772.20808.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig89772.20808.1 vs. uniprot
Match: A0A7K1ZAU7_9ACTN (Carbamoyl-phosphate synthase small chain n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZAU7_9ACTN)

HSP 1 Score: 435 bits (1119), Expect = 3.070e-151
Identity = 209/266 (78.57%), Postives = 236/266 (88.72%), Query Frame = 1 
Query:    1 RRHSNWRAESDLDGFLRRHAVPGIAGIDTRRLTRHIRDSGAMPGAFGTADAATLRAAAQADPGTAGIDLVSQVTTDAVYTVGSGTRNVVAYDLGVKETMLRHLGGMATVTVVPADTPAAEVLAMSPDGVFLSNGPGDPEEAGSIVTELPHLIGQVPIFGICLGHQVLSLALGGSTFKMKFGHHGGNVPVQDLRSGKVEITSQNHNFAVETGSVPNVTETHVCLNDGALEGLGHKELPVFSVQYHPEAGPGPHDSRYLFDEFATLMD 798
            RRHSNWR+E DLD FLR H + GIAG+DTRRLTRHIRD GAMPGAFG+AD   L+AAA ADP T+G+DLV  V+T   YTVGSG R V+AYDLG+K TMLRHL  +ATVTVVPADTPA++VLA SPDGVFLSNGPGDP+ AGSIVTELP L+G+VPIFGICLGHQVLSLALGG+TFKMKFGHHGGNVPV+D+RSGKV ITSQNHNFAVE GSVP+V ETH+CLNDG+LEG+ H +LPVFSVQYHPEAGPGPHDSRYLF++F+ LMD
Sbjct:   95 RRHSNWRSEEDLDSFLRSHGLAGIAGVDTRRLTRHIRDFGAMPGAFGSADVDELQAAAIADPTTSGVDLVRVVSTKEPYTVGSGRRRVIAYDLGIKSTMLRHLSELATVTVVPADTPASDVLASSPDGVFLSNGPGDPQMAGSIVTELPKLLGRVPIFGICLGHQVLSLALGGTTFKMKFGHHGGNVPVKDVRSGKVGITSQNHNFAVEIGSVPDVVETHLCLNDGSLEGMFHTDLPVFSVQYHPEAGPGPHDSRYLFEDFSQLMD 360
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BLAST of mRNA_M-pyrifera_M_contig89772.20808.1 vs. uniprot
Match: A0A2D6U7R8_9ACTN (Carbamoyl-phosphate synthase small chain n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6U7R8_9ACTN)

HSP 1 Score: 431 bits (1107), Expect = 1.910e-149
Identity = 211/266 (79.32%), Postives = 228/266 (85.71%), Query Frame = 1 
Query:    1 RRHSNWRAESDLDGFLRRHAVPGIAGIDTRRLTRHIRDSGAMPGAFGTADAATLRAAAQADPGTAGIDLVSQVTTDAVYTVGSGTRNVVAYDLGVKETMLRHLGGMATVTVVPADTPAAEVLAMSPDGVFLSNGPGDPEEAGSIVTELPHLIGQVPIFGICLGHQVLSLALGGSTFKMKFGHHGGNVPVQDLRSGKVEITSQNHNFAVETGSVPNVTETHVCLNDGALEGLGHKELPVFSVQYHPEAGPGPHDSRYLFDEFATLMD 798
            RR SNWR+E  LD +LRRH + GIAGIDTRRLTRHIRD+GAMPGAFG AD ATL AAA+A+PGTAG+DLVS VTT   YTVGSG R +VAYD GVK TMLRHLG + TVTVVPA T A +VLAM+PDGVFLSNGPGDPEEAG IV ELP L+G+VPIFGICLGHQVLSLALGG T+KMKFGHHGGNVPVQD R+ KVEIT+QNHNFAVE GSVPNVTE+HVCLNDG L GL H E P FSVQYHPEAGPGPHDS YLF EFA LMD
Sbjct:   92 RRQSNWRSEEHLDDYLRRHGLAGIAGIDTRRLTRHIRDTGAMPGAFGPADQATLLAAAKAEPGTAGVDLVSLVTTPEPYTVGSGPRKIVAYDFGVKATMLRHLGEIGTVTVVPAHTSAEKVLAMNPDGVFLSNGPGDPEEAGPIVDELPKLLGKVPIFGICLGHQVLSLALGGRTYKMKFGHHGGNVPVQDTRTSKVEITAQNHNFAVEAGSVPNVTESHVCLNDGTLSGLVHNEYPAFSVQYHPEAGPGPHDSAYLFTEFAELMD 357
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BLAST of mRNA_M-pyrifera_M_contig89772.20808.1 vs. uniprot
Match: A0A7X5WNQ8_9ACTN (Carbamoyl-phosphate synthetase glutamine chain (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WNQ8_9ACTN)

HSP 1 Score: 416 bits (1069), Expect = 3.900e-144
Identity = 208/245 (84.90%), Postives = 217/245 (88.57%), Query Frame = 1 
Query:    1 RRHSNWRAESDLDGFLRRHAVPGIAGIDTRRLTRHIRDSGAMPGAFGTADAATLRAAAQADPGTAGIDLVSQVTTDAVYTVGSGTRNVVAYDLGVKETMLRHLGGMATVTVVPADTPAAEVLAMSPDGVFLSNGPGDPEEAGSIVTELPHLIGQVPIFGICLGHQVLSLALGGSTFKMKFGHHGGNVPVQDLRSGKVEITSQNHNFAVETGSVPNVTETHVCLNDGALEGLGHKELPVFSVQYHP 735
            RRHSNWRAE DLD FLRRH V  IAGIDTRRLTRHIRD+GAMPGAFG+AD A LRAAA+A+ GTAGIDLVS+VTT   YTVG G R VVAYDLGVK TMLRHLG +ATVTVVPADTPAAEVLA+ PDGVFLSNGPGDPEEAG IV ELP LIG VPIFGICLGHQVL+LALGG TFKMKFGHHGGN PVQD R+GKVEITSQNHNFAVE GSVPNVTETHVCLNDGALEGL H E PVFSVQYHP
Sbjct:   89 RRHSNWRAEGDLDSFLRRHGVAAIAGIDTRRLTRHIRDAGAMPGAFGSADQAALRAAAEAEAGTAGIDLVSRVTTREPYTVGDGPRRVVAYDLGVKTTMLRHLGELATVTVVPADTPAAEVLALEPDGVFLSNGPGDPEEAGRIVDELPKLIGHVPIFGICLGHQVLALALGGRTFKMKFGHHGGNQPVQDTRTGKVEITSQNHNFAVEMGSVPNVTETHVCLNDGALEGLVHNEHPVFSVQYHP 333
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BLAST of mRNA_M-pyrifera_M_contig89772.20808.1 vs. uniprot
Match: A0A7K2E7J1_9ACTN (Carbamoyl-phosphate synthase small chain n=9 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2E7J1_9ACTN)

HSP 1 Score: 390 bits (1001), Expect = 2.480e-133
Identity = 192/266 (72.18%), Postives = 214/266 (80.45%), Query Frame = 1 
Query:    1 RRHSNWRAESDLDGFLRRHAVPGIAGIDTRRLTRHIRDSGAMPGAFGTADAATLRAAAQADPGTAGIDLVSQVTTDAVYTVGSGTRNVVAYDLGVKETMLRHLGGMATVTVVPADTPAAEVLAMSPDGVFLSNGPGDPEEAGSIVTELPHLIGQVPIFGICLGHQVLSLALGGSTFKMKFGHHGGNVPVQDLRSGKVEITSQNHNFAVETGSVPNVTETHVCLNDGALEGLGHKELPVFSVQYHPEAGPGPHDSRYLFDEFATLMD 798
            RRHSNWRA   LD FLRRH + GI GIDTRRLTRHIRD+GAMPGAFGTAD ATL AAA+A+PGT+G+DLV +VTT   Y  GSG R VVAYDLG+K T+L  LG +ATVTVVPA TPA EVLA  PDGVFLSNGPGDPE AG  +  L  L+G VP+FGICLGHQ+L+LALGG TFKM+FGHHGGNVPV+   SG++EITSQNHNFAVE GSVP VTETHVCLND ALEGL       F VQYHPEAGPGPHD+R+ F  FA +MD
Sbjct:   93 RRHSNWRATGSLDDFLRRHGIGGITGIDTRRLTRHIRDAGAMPGAFGTADEATLLAAARAEPGTSGVDLVGEVTTAEPYLSGSGPRRVVAYDLGIKSTILSCLGELATVTVVPAHTPADEVLARRPDGVFLSNGPGDPELAGPAIEALRGLVGTVPVFGICLGHQLLALALGGRTFKMRFGHHGGNVPVRCTASGRIEITSQNHNFAVEAGSVPGVTETHVCLNDSALEGLSVDGADAFGVQYHPEAGPGPHDARHHFAAFAEMMD 358
[Close]
BLAST of mRNA_M-pyrifera_M_contig89772.20808.1 vs. uniprot
Match: A0A351EMB9_9ACTN (Carbamoyl-phosphate synthase small chain n=3 Tax=Actinobacteria TaxID=201174 RepID=A0A351EMB9_9ACTN)

HSP 1 Score: 384 bits (987), Expect = 2.800e-131
Identity = 181/265 (68.30%), Postives = 218/265 (82.26%), Query Frame = 1 
Query:    1 RRHSNWRAESDLDGFLRRHAVPGIAGIDTRRLTRHIRDSGAMPGAFGTADAATLRAAAQADPGTAGIDLVSQVTTDAVYTVGSGTRNVVAYDLGVKETMLRHLGGMATVTVVPADTPAAEVLAMSPDGVFLSNGPGDPEEAGSIVTELPHLIGQVPIFGICLGHQVLSLALGGSTFKMKFGHHGGNVPVQDLRSGKVEITSQNHNFAVETGSVPNVTETHVCLNDGALEGLGHKELPVFSVQYHPEAGPGPHDSRYLFDEFATLM 795
            RR SNWR+E D D FLR   +PGIAG+DTRRLTR++RD+GAMPGAFG A    L AAAQ++PGT+GIDLVS VTT   YT+G G   VVAYDLG+K++++  L  +ATV VVPA T +AEVL++ PDGVFLSNGPGDP  AG ++  L  L+G+VPIFGICLGHQ+LSLALGG+++KMKFGHHGGN+PV+++  G +EITSQNHNFA+E+GSVPNVTETHVCLNDG+L GL   ++P FSVQYHPEA PGPHDSRYLF EFA LM
Sbjct:   87 RRRSNWRSEDDFDSFLRSEKIPGIAGLDTRRLTRYVRDNGAMPGAFGAASIEQLSAAAQSEPGTSGIDLVSHVTTKERYTLGEGPHLVVAYDLGIKKSIVEQLAEIATVVVVPAHTSSAEVLSLKPDGVFLSNGPGDPMMAGPVIDALRQLLGRVPIFGICLGHQILSLALGGTSYKMKFGHHGGNIPVKNMGKGSIEITSQNHNFAIESGSVPNVTETHVCLNDGSLSGLKCNDIPAFSVQYHPEASPGPHDSRYLFREFADLM 351
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BLAST of mRNA_M-pyrifera_M_contig89772.20808.1 vs. uniprot
Match: A0A2E7T6A7_9ACTN (Carbamoyl-phosphate synthase small chain n=7 Tax=Actinobacteria TaxID=201174 RepID=A0A2E7T6A7_9ACTN)

HSP 1 Score: 381 bits (979), Expect = 5.100e-130
Identity = 182/265 (68.68%), Postives = 214/265 (80.75%), Query Frame = 1 
Query:    1 RRHSNWRAESDLDGFLRRHAVPGIAGIDTRRLTRHIRDSGAMPGAFGTADAATLRAAAQADPGTAGIDLVSQVTTDAVYTVGSGTRNVVAYDLGVKETMLRHLGGMATVTVVPADTPAAEVLAMSPDGVFLSNGPGDPEEAGSIVTELPHLIGQVPIFGICLGHQVLSLALGGSTFKMKFGHHGGNVPVQDLRSGKVEITSQNHNFAVETGSVPNVTETHVCLNDGALEGLGHKELPVFSVQYHPEAGPGPHDSRYLFDEFATLM 795
            RR SNWR+E DLD +LR   VPGIAG+DTRRLTRH+R++GAMPGA G+   A L  AAQA+PGT G+DLV  VTT   Y  G G   VVAYDLG+K +++  L  +ATV VVPA+T + EVLA+ PDGVFLSNGPGDP  AG +V  L  L+GQVPIFGICLGHQ+LSLALGG ++KMKFGHHGGNVPV+++ SG++EITSQNHNFA+E+GSVP VTETHVCLNDG+LEGL   ++P FSVQYHPEA PGPHDSRYLF EFA LM
Sbjct:   90 RRRSNWRSEGDLDSYLRSQGVPGIAGVDTRRLTRHVRENGAMPGALGSGSVAGLTEAAQAEPGTDGVDLVGLVTTKHSYQEGDGPFRVVAYDLGIKRSIVEQLAEVATVIVVPANTSSDEVLALEPDGVFLSNGPGDPTMAGPVVQSLGELLGQVPIFGICLGHQILSLALGGKSYKMKFGHHGGNVPVRNIESGRIEITSQNHNFAIESGSVPGVTETHVCLNDGSLEGLRCTDIPAFSVQYHPEASPGPHDSRYLFXEFAELM 354
[Close]
BLAST of mRNA_M-pyrifera_M_contig89772.20808.1 vs. uniprot
Match: A0A2E6ZG34_9ACTN (Carbamoyl-phosphate synthase small chain n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E6ZG34_9ACTN)

HSP 1 Score: 380 bits (975), Expect = 1.860e-129
Identity = 180/266 (67.67%), Postives = 218/266 (81.95%), Query Frame = 1 
Query:    1 RRHSNWRAESDLDGFLRRHAVPGIAGIDTRRLTRHIRDSGAMPGAFGTADAATLRAAAQADPGTAGIDLVSQVTTDAVYTVGSGTRNVVAYDLGVKETMLRHLGGMATVTVVPADTPAAEVLAMSPDGVFLSNGPGDPEEAGSIVTELPHLIGQVPIFGICLGHQVLSLALGGSTFKMKFGHHGGNVPVQDLRSGKVEITSQNHNFAVETGSVPNVTETHVCLNDGALEGLGHKELPVFSVQYHPEAGPGPHDSRYLFDEFATLMD 798
            RR SNWR+E  LD +LR   VPGIAG+DTRRLTRH+R++GAMPGA G+A  + L  AA ++PGT GIDLVS+VTT  +Y  G G   VVAYDLG+K+++++ L  +ATV VVPA T + +VLA+ P GVFLSNGPGDP  AG +V  L  L+GQVP+FGICLGHQ+LSLALGG ++KMKFGHHGGNVPV++L SG++EITSQNHNFA+E+GSVP VTETHVCLNDGALEGL   ++P FSVQYHPEA PGPHDSRYLF+EFA LM+
Sbjct:   87 RRRSNWRSEGGLDAYLRSEGVPGIAGVDTRRLTRHVRENGAMPGALGSAPLSRLEEAAASEPGTNGIDLVSEVTTSELYQAGDGPFRVVAYDLGIKKSIVQQLSDIATVLVVPAGTTSDQVLALEPHGVFLSNGPGDPTMAGQVVQALGDLLGQVPVFGICLGHQILSLALGGKSYKMKFGHHGGNVPVRNLDSGRIEITSQNHNFAIESGSVPAVTETHVCLNDGALEGLRCNDIPAFSVQYHPEASPGPHDSRYLFEEFAELMN 352
[Close]
BLAST of mRNA_M-pyrifera_M_contig89772.20808.1 vs. uniprot
Match: A0A6B1E813_9ACTN (Carbamoyl-phosphate synthase small chain n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1E813_9ACTN)

HSP 1 Score: 379 bits (973), Expect = 6.030e-129
Identity = 187/265 (70.57%), Postives = 213/265 (80.38%), Query Frame = 1 
Query:    4 RHSNWRAESDLDGFLRRHAVPGIAGIDTRRLTRHIRDSGAMPGAFGTADAATLRAAAQADPGTAGIDLVSQVTTDAVYTVGSGTRNVVAYDLGVKETMLRHLGGMATVTVVPADTPAAEVLAMSPDGVFLSNGPGDPEEAGSIVTELPHLIGQVPIFGICLGHQVLSLALGGSTFKMKFGHHGGNVPVQDLRSGKVEITSQNHNFAVETGSVPNVTETHVCLNDGALEGLGHKELPVFSVQYHPEAGPGPHDSRYLFDEFATLMD 798
            R SNWRA   LD +L RH VP I GIDTRRLTRHIRD+GAMPGAFGTA  ATL AAA+A+PGT+GIDLV++VTT+  YTVG+G   VVAYDLG+K T+L  L  +ATVTVVPA TPAAEVLA  PDGVFLSNGPGDPE AG  +  L  L+G VP+FGICLGHQ+L+L+LGG TFKM+FGHHGGNVPVQ   +G++EITSQNHNFAV  GSVP VTETHVCLNDG L GL       FSVQYHPEAGPGPHD+R+ F +FA +MD
Sbjct:  103 RPSNWRATGSLDDYLCRHGVPAITGIDTRRLTRHIRDAGAMPGAFGTAAEATLLAAARAEPGTSGIDLVAEVTTEHPYTVGTGAYRVVAYDLGIKSTILDCLQELATVTVVPAHTPAAEVLARQPDGVFLSNGPGDPELAGPAIEALRTLVGTVPVFGICLGHQLLALSLGGRTFKMRFGHHGGNVPVQCTATGRIEITSQNHNFAVVAGSVPGVTETHVCLNDGTLAGLSVDGADAFSVQYHPEAGPGPHDARHHFSKFAEMMD 367
[Close]
BLAST of mRNA_M-pyrifera_M_contig89772.20808.1 vs. uniprot
Match: A0A2E5I0Q1_9ACTN (Carbamoyl-phosphate synthase small chain n=2 Tax=root TaxID=1 RepID=A0A2E5I0Q1_9ACTN)

HSP 1 Score: 375 bits (964), Expect = 9.670e-128
Identity = 175/265 (66.04%), Postives = 215/265 (81.13%), Query Frame = 1 
Query:    1 RRHSNWRAESDLDGFLRRHAVPGIAGIDTRRLTRHIRDSGAMPGAFGTADAATLRAAAQADPGTAGIDLVSQVTTDAVYTVGSGTRNVVAYDLGVKETMLRHLGGMATVTVVPADTPAAEVLAMSPDGVFLSNGPGDPEEAGSIVTELPHLIGQVPIFGICLGHQVLSLALGGSTFKMKFGHHGGNVPVQDLRSGKVEITSQNHNFAVETGSVPNVTETHVCLNDGALEGLGHKELPVFSVQYHPEAGPGPHDSRYLFDEFATLM 795
            RR SNWR+E +LD +LR   VPGI+G+DTRRLTRHIRD+GAMPGAFG+    +L +AA+++PGT G+DLVS+VTT   Y++G G   +VAYDLG+K +++  L  MATV VVPADT + + L++ P GVFLSNGPGDP  AG +   L   IG +PIFGICLGHQVLSLALGG ++KMKFGHHGGNVPV+++ +G+VEITSQNHNFA+E+GSVP VTETHVCLNDGALEGL   ++P FSVQYHPEA PGPHDSRYLF +F+ LM
Sbjct:   90 RRQSNWRSEDNLDNYLRHEGVPGISGVDTRRLTRHIRDNGAMPGAFGSGSEESLASAAKSEPGTTGVDLVSKVTTLEPYSLGDGPHRIVAYDLGIKSSIVEQLAKMATVHVVPADTTSEQALSLEPHGVFLSNGPGDPTMAGQVTDALDDFIGHIPIFGICLGHQVLSLALGGRSYKMKFGHHGGNVPVRNIDNGRVEITSQNHNFAIESGSVPGVTETHVCLNDGALEGLRSNDVPAFSVQYHPEASPGPHDSRYLFGQFSDLM 354
[Close]
BLAST of mRNA_M-pyrifera_M_contig89772.20808.1 vs. uniprot
Match: A0A350RIT1_9ACTN (Carbamoyl-phosphate synthase small chain n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A350RIT1_9ACTN)

HSP 1 Score: 375 bits (962), Expect = 1.760e-127
Identity = 177/265 (66.79%), Postives = 214/265 (80.75%), Query Frame = 1 
Query:    1 RRHSNWRAESDLDGFLRRHAVPGIAGIDTRRLTRHIRDSGAMPGAFGTADAATLRAAAQADPGTAGIDLVSQVTTDAVYTVGSGTRNVVAYDLGVKETMLRHLGGMATVTVVPADTPAAEVLAMSPDGVFLSNGPGDPEEAGSIVTELPHLIGQVPIFGICLGHQVLSLALGGSTFKMKFGHHGGNVPVQDLRSGKVEITSQNHNFAVETGSVPNVTETHVCLNDGALEGLGHKELPVFSVQYHPEAGPGPHDSRYLFDEFATLM 795
            RR SNWR+E DL+ +L    +PGIAG+DTRRLTRH+R++GAMP AFG+A    L  AA ++PGT G+DLVS VTT   Y VG G   VVAYDLG+K++++  L  +ATV VVPA T + EVLA+ P GVFLSNGPGDP  AG +VT L  L+G+VP+FGICLGHQ+LSLALGG ++KMKFGHHGGNVPV+++ +G++EITSQNHNFA+E+GSVP VTETHVCLNDGALEGL   ++P FSVQYHPEA PGPHDSRYLF EFA LM
Sbjct:   87 RRRSNWRSEGDLESYLLSEGIPGIAGVDTRRLTRHVRENGAMPAAFGSAPFELLVEAASSEPGTEGVDLVSSVTTSRTYEVGEGDFRVVAYDLGIKKSIVEQLSEIATVFVVPAQTSSDEVLALDPHGVFLSNGPGDPMMAGQVVTALTGLLGKVPVFGICLGHQILSLALGGKSYKMKFGHHGGNVPVRNVETGRIEITSQNHNFAIESGSVPGVTETHVCLNDGALEGLRCNDIPAFSVQYHPEASPGPHDSRYLFKEFADLM 351
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89772.20808.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7K1ZAU7_9ACTN3.070e-15178.57Carbamoyl-phosphate synthase small chain n=2 Tax=A... [more]
A0A2D6U7R8_9ACTN1.910e-14979.32Carbamoyl-phosphate synthase small chain n=7 Tax=A... [more]
A0A7X5WNQ8_9ACTN3.900e-14484.90Carbamoyl-phosphate synthetase glutamine chain (Fr... [more]
A0A7K2E7J1_9ACTN2.480e-13372.18Carbamoyl-phosphate synthase small chain n=9 Tax=A... [more]
A0A351EMB9_9ACTN2.800e-13168.30Carbamoyl-phosphate synthase small chain n=3 Tax=A... [more]
A0A2E7T6A7_9ACTN5.100e-13068.68Carbamoyl-phosphate synthase small chain n=7 Tax=A... [more]
A0A2E6ZG34_9ACTN1.860e-12967.67Carbamoyl-phosphate synthase small chain n=1 Tax=A... [more]
A0A6B1E813_9ACTN6.030e-12970.57Carbamoyl-phosphate synthase small chain n=1 Tax=A... [more]
A0A2E5I0Q1_9ACTN9.670e-12866.04Carbamoyl-phosphate synthase small chain n=2 Tax=r... [more]
A0A350RIT1_9ACTN1.760e-12766.79Carbamoyl-phosphate synthase small chain n=2 Tax=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89772contigM-pyrifera_M_contig89772:3..800 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score307.8
Seed ortholog evalue5.1e-81
Seed eggNOG ortholog1229780.BN381_50141
Preferred namecarA
KEGG rclassRC00002,RC00010,RC00043,RC02750,RC02798,RC03314
KEGG koko:K01955,ko:K01956
KEGG ReactionR00256,R00575,R01395,R10948,R10949
KEGG Pathwayko00240,ko00250,ko01100,map00240,map00250,map01100
KEGG ModuleM00051
Hectar predicted targeting categoryother localisation
GOsGO:0000050,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005951,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0019627,GO:0019752,GO:0032991,GO:0034641,GO:0040007,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494
EggNOG free text desc.Carbamoyl-phosphate synthase small chain, CPSase domain
EggNOG OGs2GKFA@201174,3UWBX@52018,COG0505@1,COG0505@2
EC6.3.5.5
COG Functional cat.F
BiGG ReactioniNJ661.Rv1383,iYO844.BSU15510
Best tax levelunclassified Actinobacteria (class)
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size798
Cds size798
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816808.5503747-CDS-M-pyrifera_M_contig89772:2..8001622816808.5503747-CDS-M-pyrifera_M_contig89772:2..800Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89772 3..800 +
1692278190.8878126-CDS-M-pyrifera_M_contig89772:2..8001692278190.8878126-CDS-M-pyrifera_M_contig89772:2..800Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89772 3..800 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89772.20808.1prot_M-pyrifera_M_contig89772.20808.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig89772 3..800 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig89772.20808.1

>prot_M-pyrifera_M_contig89772.20808.1 ID=prot_M-pyrifera_M_contig89772.20808.1|Name=mRNA_M-pyrifera_M_contig89772.20808.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=266bp
RRHSNWRAESDLDGFLRRHAVPGIAGIDTRRLTRHIRDSGAMPGAFGTAD
AATLRAAAQADPGTAGIDLVSQVTTDAVYTVGSGTRNVVAYDLGVKETML
RHLGGMATVTVVPADTPAAEVLAMSPDGVFLSNGPGDPEEAGSIVTELPH
LIGQVPIFGICLGHQVLSLALGGSTFKMKFGHHGGNVPVQDLRSGKVEIT
SQNHNFAVETGSVPNVTETHVCLNDGALEGLGHKELPVFSVQYHPEAGPG
PHDSRYLFDEFATLMD
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mRNA from alignment at M-pyrifera_M_contig89772:3..800+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig89772.20808.1 ID=mRNA_M-pyrifera_M_contig89772.20808.1|Name=mRNA_M-pyrifera_M_contig89772.20808.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=798bp|location=Sequence derived from alignment at M-pyrifera_M_contig89772:3..800+ (Macrocystis pyrifera P11B4 male)
CGTCGCCACAGCAATTGGCGGGCCGAGAGCGATCTCGACGGCTTCCTGCG
CCGCCACGCCGTGCCGGGCATCGCCGGGATCGACACCCGCCGGCTCACCC
GCCACATCCGCGACAGCGGCGCGATGCCGGGGGCCTTCGGCACGGCCGAC
GCCGCCACCCTGCGTGCTGCCGCCCAGGCCGATCCGGGCACCGCCGGTAT
CGACCTGGTCAGCCAGGTCACCACCGACGCCGTCTACACGGTCGGCAGCG
GCACCCGAAACGTCGTCGCCTACGACCTGGGGGTGAAGGAGACCATGCTG
CGCCACCTCGGCGGCATGGCGACCGTCACCGTCGTCCCCGCCGACACGCC
GGCCGCCGAGGTGTTGGCCATGAGCCCGGACGGCGTGTTCCTGTCCAACG
GCCCGGGTGACCCTGAAGAGGCCGGCAGCATCGTCACCGAGCTGCCCCAC
CTGATCGGACAGGTACCGATCTTCGGCATCTGTCTCGGTCATCAGGTGTT
GTCGCTGGCCCTCGGCGGCTCGACCTTCAAGATGAAGTTCGGGCACCACG
GCGGCAACGTGCCCGTCCAGGATCTCCGCAGCGGCAAGGTCGAGATCACC
AGCCAGAACCACAACTTCGCCGTCGAGACGGGGTCGGTCCCGAATGTGAC
CGAGACCCATGTCTGTCTCAACGACGGGGCCCTCGAGGGTCTCGGCCACA
AGGAGCTTCCGGTCTTCAGCGTGCAATACCACCCCGAGGCCGGCCCCGGC
CCCCACGACAGCCGCTACCTCTTCGACGAGTTCGCCACCCTGATGGAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig89772:3..800+

>mRNA_M-pyrifera_M_contig89772.20808.1 ID=mRNA_M-pyrifera_M_contig89772.20808.1|Name=mRNA_M-pyrifera_M_contig89772.20808.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1596bp|location=Sequence derived from alignment at M-pyrifera_M_contig89772:3..800+ (Macrocystis pyrifera P11B4 male)
CGTCGCCACAGCAATTGGCGGGCCGAGAGCGATCTCGACGGCTTCCTGCG
CCGCCACGCCGTGCCGGGCATCGCCGGGATCGACACCCGCCGGCTCACCC
GCCACATCCGCGACAGCGGCGCGATGCCGGGGGCCTTCGGCACGGCCGAC
GCCGCCACCCTGCGTGCTGCCGCCCAGGCCGATCCGGGCACCGCCGGTAT
CGACCTGGTCAGCCAGGTCACCACCGACGCCGTCTACACGGTCGGCAGCG
GCACCCGAAACGTCGTCGCCTACGACCTGGGGGTGAAGGAGACCATGCTG
CGCCACCTCGGCGGCATGGCGACCGTCACCGTCGTCCCCGCCGACACGCC
GGCCGCCGAGGTGTTGGCCATGAGCCCGGACGGCGTGTTCCTGTCCAACG
GCCCGGGTGACCCTGAAGAGGCCGGCAGCATCGTCACCGAGCTGCCCCAC
CTGATCGGACAGGTACCGATCTTCGGCATCTGTCTCGGTCATCAGGTGTT
GTCGCTGGCCCTCGGCGGCTCGACCTTCAAGATGAAGTTCGGGCACCACG
GCGGCAACGTGCCCGTCCAGGATCTCCGCAGCGGCAAGGTCGAGATCACC
AGCCAGAACCACAACTTCGCCGTCGAGACGGGGTCGGTCCCGAATGTGAC
CGAGACCCATGTCTGTCTCAACGACGGGGCCCTCGAGGGTCTCGGCCACA
AGGAGCTTCCGGTCTTCAGCGTGCAATACCACCCCGAGGCCGGCCCCGGC
CCCCACGACAGCCGCTACCTCTTCGACGAGTTCGCCACCCTGATGGACCG
TCGCCACAGCAATTGGCGGGCCGAGAGCGATCTCGACGGCTTCCTGCGCC
GCCACGCCGTGCCGGGCATCGCCGGGATCGACACCCGCCGGCTCACCCGC
CACATCCGCGACAGCGGCGCGATGCCGGGGGCCTTCGGCACGGCCGACGC
CGCCACCCTGCGTGCTGCCGCCCAGGCCGATCCGGGCACCGCCGGTATCG
ACCTGGTCAGCCAGGTCACCACCGACGCCGTCTACACGGTCGGCAGCGGC
ACCCGAAACGTCGTCGCCTACGACCTGGGGGTGAAGGAGACCATGCTGCG
CCACCTCGGCGGCATGGCGACCGTCACCGTCGTCCCCGCCGACACGCCGG
CCGCCGAGGTGTTGGCCATGAGCCCGGACGGCGTGTTCCTGTCCAACGGC
CCGGGTGACCCTGAAGAGGCCGGCAGCATCGTCACCGAGCTGCCCCACCT
GATCGGACAGGTACCGATCTTCGGCATCTGTCTCGGTCATCAGGTGTTGT
CGCTGGCCCTCGGCGGCTCGACCTTCAAGATGAAGTTCGGGCACCACGGC
GGCAACGTGCCCGTCCAGGATCTCCGCAGCGGCAAGGTCGAGATCACCAG
CCAGAACCACAACTTCGCCGTCGAGACGGGGTCGGTCCCGAATGTGACCG
AGACCCATGTCTGTCTCAACGACGGGGCCCTCGAGGGTCTCGGCCACAAG
GAGCTTCCGGTCTTCAGCGTGCAATACCACCCCGAGGCCGGCCCCGGCCC
CCACGACAGCCGCTACCTCTTCGACGAGTTCGCCACCCTGATGGAC
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