mRNA_M-pyrifera_M_contig89691.20792.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig89691.20792.1 vs. uniprot
Match: A0A7S1ZJQ9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZJQ9_TRICV) HSP 1 Score: 122 bits (306), Expect = 3.660e-32 Identity = 60/147 (40.82%), Postives = 94/147 (63.95%), Query Frame = 1 Query: 10 FVETSRGTRISRDATVHGGRNVDLDARVVISSGVVLHGDVGR-ISIGSDSALLERTVVRPPPILDAEDDSRHTPVAIGAHTVIGKGCVVKASAIGSNCFIEDNVVLGCRSVLKDGCIVEEGAHVADDAVFPPFSIIKGKPARRVGKV 447 +++T+ +SR A++HG R+V++ + V+ G V+ GD+G + +G + +R+V+RPP + R P +IG HT IG+ CVV+A+A+G + + D VLG RSV+KD C +E G +A DAV PPFSI+ G P R VG++ Sbjct: 21 YIKTAANNYVSRSASIHGSRHVEIRGKSVVRPGAVVRGDLGAPVRVGRYCRVGDRSVLRPPSASLPDGTERRLPQSIGNHTSIGRDCVVEAAAVGFSVLVGDGCVLGKRSVIKDCCRIEPGTVLAPDAVVPPFSIVSGSPGRVVGEM 167
BLAST of mRNA_M-pyrifera_M_contig89691.20792.1 vs. uniprot
Match: A0A7S0C6H6_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C6H6_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 2.370e-21 Identity = 49/130 (37.69%), Postives = 81/130 (62.31%), Query Frame = 1 Query: 79 LDARVVISSGVVLHGDVGR-ISIGSDSALLERTVVRPPPILDA------EDDSRHTPVAIGAHTVIGKGCVVKASAIGSNCFIEDNVVLGCRSVLKDGCIVEEGAHVADDAVFPPFSIIKGKPARRVGKV 447 + + V+ + +L GD I IG ++ T++RPP ++++ + + P+ +G +T IGK CV++A+A+GS+ FI D+VVL R ++KD C +E+G V D V PPFSI+KG PA+ VG++ Sbjct: 1 MKGKSVVLAYAILRGDFNSPIRIGRYVSIGIHTILRPPTLIESSGGRSMKPTMSYLPITVGNNTRIGKYCVIEATAVGSSVFIGDDVVLSKRCIIKDCCRIEDGTVVPSDMVIPPFSIVKGCPAKIVGEL 130
BLAST of mRNA_M-pyrifera_M_contig89691.20792.1 vs. uniprot
Match: A0A8J9X5Q7_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X5Q7_PHATR) HSP 1 Score: 88.2 bits (217), Expect = 1.730e-19 Identity = 42/137 (30.66%), Postives = 74/137 (54.01%), Query Frame = 1 Query: 10 FVETSRGTRISRDATVHGGRNVDLDARVVISSGVVLHGDVGRISIGSDSALLERTVVRPPP----ILDAEDDSRHTPVAIGAHTVIGKGCVVKASAIGSNCFIEDNVVLGCRSVLKDGCIVEEGAHVADDAVFPPFS 408 +++T+ ISR AT+HG R V++ R V+ + +HGD+ + IG + T +RP P ++ + + + P+ IG+HT+IG C+++A+AIG G R ++KD + + + D V PPF+ Sbjct: 1 YIKTTTHNHISRSATIHGSRQVEIKGRTVLEAETAIHGDLALVRIGRYVYVESGTTLRPAPQPQLMIPIDSSTTYIPMIIGSHTIIGSNCMIQAAAIGXXXXXXXXXXXGERVIVKDCXXIADNVTLGPDTVIPPFT 137
BLAST of mRNA_M-pyrifera_M_contig89691.20792.1 vs. uniprot
Match: A0A835Z209_9STRA (Dynactin 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z209_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 3.240e-16 Identity = 50/161 (31.06%), Postives = 73/161 (45.34%), Query Frame = 1 Query: 7 EFVETSRGTRISRDATVHGGRNVDLDARVVISSGVVLHGDVGRISIGSDSALLERTVVRPPPILD--------------AEDDSRHTPVAIGAHTVIGKGCVVKASAIGSNCFIEDNVVLGCRSVLKDGCIVEEGAHVADDAVFPPFSIIKGKPARRVGKV 447 ++V T+ +SR ATVHG +NV + + ++ GV LHGD+ I G + E + +RP L+ A HTP+ +G HT IG+GCVV+A+AIG N + D V F+ + GKP VG+V Sbjct: 12 DYVRTTTNNLVSRKATVHGPQNVSIKGKGIVMPGVTLHGDLATIRFGRYCLVDEGSTIRPGVRLEQGSGAAAAADANAKAAVTRHHTPMLVGNHTHIGRGCVVEAAAIGCNVTVGDGCVXXXXXXXXXXXXXXXXXXXXXXXXXXXFTRVHGKPGLAVGEV 172
BLAST of mRNA_M-pyrifera_M_contig89691.20792.1 vs. uniprot
Match: J9JUY9_ACYPI (Uncharacterized protein n=9 Tax=Aphidomorpha TaxID=33380 RepID=J9JUY9_ACYPI) HSP 1 Score: 78.6 bits (192), Expect = 2.730e-15 Identity = 44/147 (29.93%), Postives = 76/147 (51.70%), Query Frame = 1 Query: 7 EFVETSRGTRISRDATVHGGRNVDLDARVVISSGVVLHGDVGRISIGSDSALLERTVVRPPPILDAEDDSRHTPVAIGAHTVIGKGCVVKASAIGSNCFIEDNVVLGCRSVLKDGCIVEEGAHVADDAVFPPFSIIKGKPARRVGKV 447 E+VET+ G ++SR A ++G +N+ L+ +V++ SGV++ GD+ + +G + + +VVRPP + + IG H IG+ V++A+ IGS I NV +A D V P F+ G P ++G++ Sbjct: 12 EYVETTTGNKVSRQAQIYGSQNIILNGKVILQSGVMIRGDLASVKMGRYCFVGKGSVVRPP-CKKFSGGFTYFALQIGDHVHIGEQSVIQAAIIGSYVHIXXNVXXXXXXXXXXXXXXXXXXXLAPDTVVPSFTHYSGSPGMQIGQL 157
BLAST of mRNA_M-pyrifera_M_contig89691.20792.1 vs. uniprot
Match: A0A2A2LVI6_9BILA (Uncharacterized protein n=1 Tax=Diploscapter pachys TaxID=2018661 RepID=A0A2A2LVI6_9BILA) HSP 1 Score: 79.0 bits (193), Expect = 3.320e-15 Identity = 49/151 (32.45%), Postives = 77/151 (50.99%), Query Frame = 1 Query: 4 GEFVETSRGTRISR-----DATVHGGRNVDLDARVVISSGVVLHGDVGRISIGSDSALLERTVVRPPPILDAEDDSRHTPVAIGAHTVIGKGCVVKASAIGSNCFIEDNVVLGCRSVLKDGCIVEEGAHVADDAVFPPFSIIKGKPARRVG 441 G +VET G ++++ D+ + G +N+ L+ + +I V + GD+ I G + RT +RP ++ + PV IG H I + CV+ A+ G +VLKD C VE + V DAV+PPFS+I G PA+ +G Sbjct: 11 GTYVETPTGNKVAKPDPGQDSKICGTQNIVLNGKCIIHKEVAMRGDMANIRCGRFCIIGSRTTIRPGNKKFSKGVTL-MPVHIGDHVYIEENCVIAAAQXXXXXXXXXXXXXGKSAVLKDCCQVEPDSVVPADAVYPPFSLIAGNPAKVIG 160
BLAST of mRNA_M-pyrifera_M_contig89691.20792.1 vs. uniprot
Match: A0A0K0EUF2_STRVS (Dynactin subunit 5 (inferred by orthology to a human protein) n=2 Tax=Strongyloides TaxID=6247 RepID=A0A0K0EUF2_STRVS) HSP 1 Score: 72.4 bits (176), Expect = 9.610e-13 Identity = 42/146 (28.77%), Postives = 75/146 (51.37%), Query Frame = 1 Query: 7 EFVETSRGTRISRDATVHGGRNVDLDARVVISSGVVLHGDVGRISIGSDSALLERTVVRPPPILDAEDDSRHTPVAIGAHTVIGKGCVVKASAIGSNCFIEDNVVLGCRSVLKDGCIVEEGAHVADDAVFPPFSIIKGKPARRVGK 444 E+ ET+ G RI+++ + G N+ L+ +V + L GD+ I IG S + E ++RP L + +T + IG++ I + CV+ + +G +K+ C + + + +A+FPPFS+I G PA+ VG+ Sbjct: 13 EYFETANGNRIAKNCNLLGSVNIILNGKVTVMDHCTLRGDLNMIRIGMFSVVRENCIIRPSYKLYRKGLMFYT-IQIGSNVFIEENCVIMSIHXXXXXXXXXXXXIGRGVHIKECCQILPNSVIPANAIFPPFSVIGGNPAKVVGE 157
BLAST of mRNA_M-pyrifera_M_contig89691.20792.1 vs. uniprot
Match: A0A2V0PJE7_9CHLO (Gamma carbonic anhydrase-like mitochondrial n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PJE7_9CHLO) HSP 1 Score: 72.4 bits (176), Expect = 2.980e-12 Identity = 50/150 (33.33%), Postives = 80/150 (53.33%), Query Frame = 1 Query: 16 ETSRGTRISRDATVHGGRNVDLDARVVISSGVVLHGDVGRISIGSDSALLERTVVRPPPILDAEDDSRHTPVAIGAHTVIGKGCVVKASAIGSNCFIEDNVVLGCRSVLKDGCIVEEGAHVADDAVFPPFSIIK------GKPARRVGKV 447 ET+ G I+ AT+ G +VDL RV I + VL GD+ I+IG S + +RTV+ +R +P + A +IGK ++ + +C ++DN ++G RSVL +G ++E + +A +V PP + G PAR V K+ Sbjct: 83 ETAVGAYIAPSATIVG--DVDLLDRVSIWNHAVLRGDLNNITIGQVSNVQDRTVIHA---------ARTSPTGLTAAVLIGKFVTIEPNCTLRSCRVQDNCIVGARSVLMEGSMMESHSVLAPGSVLPPARRVPEGELWAGNPARFVRKL 221
BLAST of mRNA_M-pyrifera_M_contig89691.20792.1 vs. uniprot
Match: A0A7R9V3Z9_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V3Z9_9CHLO) HSP 1 Score: 70.5 bits (171), Expect = 1.510e-11 Identity = 51/149 (34.23%), Postives = 75/149 (50.34%), Query Frame = 1 Query: 19 TSRGTRISRDATVHGGRNVDLDARVVISSGVVLHGDVGRISIGSDSALLERTVVRPPPILDAEDDSRHTPVAIGAHTVIGKGCVVKASAIGSNCFIEDNVVLGCRSVLKDGCIVEEGAHVADDAVFPPFSIIK------GKPARRVGKV 447 T T I+ +A V G +VD+ +V I G VL GD+ +I IG S +L+R VV +R P + T+IG ++ A+ C IE V++G RSV+ +G I+E + +A +V PP I G PAR V K+ Sbjct: 83 TQADTWIAPNAVVAG--DVDIYDQVAIFYGAVLRGDLNKIRIGGTSVVLDRAVVH---------TARAVPTGLNPATLIGDHVTIEPYAVLRACRIEPTVLIGARSVVCEGAIIESESILAPASVLPPARRIPSGELWAGNPARFVRKL 220
BLAST of mRNA_M-pyrifera_M_contig89691.20792.1 vs. uniprot
Match: Q6QIV6_CHLRE (Mitochondrial NADH:ubiquinone oxidoreductase 29 kDa subunit n=4 Tax=Chlamydomonas TaxID=3052 RepID=Q6QIV6_CHLRE) HSP 1 Score: 69.7 bits (169), Expect = 2.510e-11 Identity = 42/132 (31.82%), Postives = 71/132 (53.79%), Query Frame = 1 Query: 70 NVDLDARVVISSGVVLHGDVGRISIGSDSALLERTVVRPPPILDAEDDSRHTPVAIGAHTVIGKGCVVKASAIGSNCFIEDNVVLGCRSVLKDGCIVEEGAHVADDAVFPPFSIIK------GKPARRVGKV 447 +VD+ + G VL GD+ +I +G+ SA+L+R VV +R P + A T+IG+ V+ A+ +C +E V++G RSV+ +G +VE + +A ++V PP I G PA+ + K+ Sbjct: 81 DVDIYGGASVFFGAVLRGDLNKIRLGNRSAILDRAVVHA---------ARAVPTGLNAATLIGEKVTVEPYAVLRSCRVEPKVIIGARSVVCEGAVVESESILAPNSVVPPARRIPSGELWGGSPAKFIRKL 203 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89691.20792.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig89691.20792.1 >prot_M-pyrifera_M_contig89691.20792.1 ID=prot_M-pyrifera_M_contig89691.20792.1|Name=mRNA_M-pyrifera_M_contig89691.20792.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=153bp MGEFVETSRGTRISRDATVHGGRNVDLDARVVISSGVVLHGDVGRISIGSback to top mRNA from alignment at M-pyrifera_M_contig89691:108..773- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig89691.20792.1 ID=mRNA_M-pyrifera_M_contig89691.20792.1|Name=mRNA_M-pyrifera_M_contig89691.20792.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=666bp|location=Sequence derived from alignment at M-pyrifera_M_contig89691:108..773- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig89691:108..773- >mRNA_M-pyrifera_M_contig89691.20792.1 ID=mRNA_M-pyrifera_M_contig89691.20792.1|Name=mRNA_M-pyrifera_M_contig89691.20792.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=918bp|location=Sequence derived from alignment at M-pyrifera_M_contig89691:108..773- (Macrocystis pyrifera P11B4 male)back to top |