mRNA_M-pyrifera_M_contig8960.20771.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig8960.20771.1
Unique NamemRNA_M-pyrifera_M_contig8960.20771.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig8960.20771.1 vs. uniprot
Match: D8LGC9_ECTSI (Oxidoreductase domain protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGC9_ECTSI)

HSP 1 Score: 377 bits (969), Expect = 2.970e-125
Identity = 203/313 (64.86%), Postives = 223/313 (71.25%), Query Frame = 1
Query:    1 RSYAECLDMTEAFEAAKLPLYIGYYRRYLPKFVYVKSVLDSGAIGSVTSVSLRLSQSRHKFEGEEVRADWRVDATNAGGGLFMDLGSHQLDLLDHLVGPLKPRGGAAHRLRPTSGLPGPSYAVEDVVCLAFETSSGALGTASWNFCSGVWEDTIEIIGELGSISFSCFNNKPVRLEVAAK--------------VSPREGD---------------------------------ASIATTSHN------GLS-------------VGGLCCSSTGRAAARTALVMDRALEEFYGGPGSRDKPFWETPEKWATA 741
            RS+AECLDMT AFE AK+PLYIGYYRRYLPKFVYVKSV+DSG IG VTSV+LRLSQSRHKFEGEEVRADWRVDATNAGGGLFMDLGSHQLDLLDHLVGPL+P GG A RLRP++GLPGPS+AVEDVVCL+F T+SGA+GTASWNFCSGVW+DTI+I+GELGS+SFSCFNNKPVRLEVAAK               +PR  +                                 AS+   S        GL              V   CCSSTGRAAARTALVMDRALE FYGGPGSRD+ FWE+PEKW  A
Sbjct:  106 RSHAECLDMTAAFEDAKIPLYIGYYRRYLPKFVYVKSVIDSGTIGRVTSVNLRLSQSRHKFEGEEVRADWRVDATNAGGGLFMDLGSHQLDLLDHLVGPLRPLGGTAQRLRPSAGLPGPSFAVEDVVCLSFSTASGAVGTASWNFCSGVWDDTIDIVGELGSLSFSCFNNKPVRLEVAAKXXXXXXXXXXXXXXAAPRAVERLKEPEVTMHQAEQPDHVHQPLVEAVLRDLRLWASLPKDSPERARLAAGLRQEEDEARASXXXXVRDACCSSTGRAAARTALVMDRALEGFYGGPGSRDQAFWESPEKWDKA 418          
BLAST of mRNA_M-pyrifera_M_contig8960.20771.1 vs. uniprot
Match: A0A4P5STC7_9BACT (Oxidoreductase n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A4P5STC7_9BACT)

HSP 1 Score: 185 bits (469), Expect = 2.380e-51
Identity = 109/251 (43.43%), Postives = 149/251 (59.36%), Query Frame = 1
Query:    1 RSYAECLDMTEAFEAAKLPLYIGYYRRYLPKFVYVKSVLDSGAIGSVTSVSLR-LSQSRHKFEGEEVRADWRVDATNAGGGLFMDLGSHQLDLLDHLVGPLKPRGGAAHRLRPTSGLPGPSYAVEDVVCLAFETSSGALGTASWNFCSGVWEDTIEIIGELGSISFSCFNNKPVRLEVAAKV------SPREGDASIATTSHNGLSVGGLCCSSTGRAAARTALVMDRALEEFYGGPGSRDKPFWETPEKW 732
            R+YAE L +TEAFE A +PL++ YYRR LP+F+ VK+++D+G +G VT + +R  S +    EG+  R  WR  A  AGGGLF+DL SH LD+LD+++G L P  G        S   G  YAVED + + F+T +GALGTA WNF     E+ + I G  G +SFS F N+PV+LE    V      +P+        T  N L +G   C+S GR A RTA +MD AL+ +YG   SR+  FW+   +W
Sbjct:  102 RNYAESLAITEAFEKAGVPLFVAYYRRALPRFLKVKAIVDTGQLGKVTGIYVRHTSPANRSPEGD--RLPWRFQAEEAGGGLFLDLASHTLDILDYILGALNPVAGR-------SANSGGRYAVEDGIAMYFQTPNGALGTAHWNFMGFAKEEFVTIEGMGGRVSFSVFGNEPVKLETTEGVEEFDLQNPQCVQYPFIQTMVNAL-LGKGECASNGRTAMRTAYIMDVALQNYYG---SREDAFWQRESEW 339          
BLAST of mRNA_M-pyrifera_M_contig8960.20771.1 vs. uniprot
Match: A0A7V2CXB7_9BACT (Gfo/Idh/MocA family oxidoreductase n=1 Tax=Chthoniobacterales bacterium TaxID=2201154 RepID=A0A7V2CXB7_9BACT)

HSP 1 Score: 182 bits (461), Expect = 3.680e-50
Identity = 109/253 (43.08%), Postives = 141/253 (55.73%), Query Frame = 1
Query:    1 RSYAECLDMTEAFEAAKLPLYIGYYRRYLPKFVYVKSVLDSGAIGSVTSVSLRLSQSRHKFEGEEVRADWRVDATNAGGGLFMDLGSHQLDLLDHLVGPLKPRGGAAHRLRPTSGLPGPSYAVEDVVCLAFETSSGALGTASWNFCSGVWEDTIEIIGELGSISFSCFNNKPVRLEVAAKVS------PREGDASIATTSHNGLSVGGLCCSSTGRAAARTALVMDRALEEFYGGPGSRDKPFWETPEKWATA 741
            R++AEC  M  AF  A LPL++ YYRR LP+FV  + ++  GA+G +TSVS+R  + RH+   +     WR +A  +GGG+F+DLGSH LD LDH+ GPL    G A  L   +G+      VEDVV L+F T+ GA+G+  WNF S   ED IE +G  G I+FSCF   PV LE   K        P      +     + L   G    STG + ART  VMD ALE +YGG   R +PFWE    W  A
Sbjct:  101 RNHAECERMVSAFRTAGLPLFVAYYRRALPRFVKARDLVRDGALGRITSVSVRCLEPRHRTT-DPHHLPWRQEAAVSGGGIFLDLGSHALDYLDHVFGPLLEARGTAANL---AGI----GRVEDVVGLSFRTADGAIGSGLWNFASDYREDRIEFVGTSGRITFSCFGTDPVCLERDGKAELFACPQPEHVQQPLIRAMVDALRGNGES-PSTGESGARTQRVMDVALETYYGG---RQRPFWEDANGWPGA 341          
BLAST of mRNA_M-pyrifera_M_contig8960.20771.1 vs. uniprot
Match: A0A7C4IJP0_9BACT (Gfo/Idh/MocA family oxidoreductase n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A7C4IJP0_9BACT)

HSP 1 Score: 181 bits (460), Expect = 5.030e-50
Identity = 106/251 (42.23%), Postives = 141/251 (56.18%), Query Frame = 1
Query:    1 RSYAECLDMTEAFEAAKLPLYIGYYRRYLPKFVYVKSVLDSGAIGSVTSVSLRLSQSRHKFEGEEVRADWRVDATNAGGGLFMDLGSHQLDLLDHLVGPLKPRGGAAHRLRPTSGLPGPSYAVEDVVCLAFETSSGALGTASWNFCSGVWEDTIEIIGELGSISFSCFNNKPVRLEVAAKVS-------PREGDASIATTSHNGLSVGGLCCSSTGRAAARTALVMDRALEEFYGGPGSRDKPFWETPEKW 732
            RSYAEC  M EAF + KLPL++ YYRR LP+FV  + ++  GA+G++T V  R  + RH+     +   WR+ A  +GGG+FMDLGSH LD++D++VGPL+   G A  +         SY VEDVV ++F T  GA G+A+WNF S    D IE IG  G ++ S F  +PVRL     +        P      I T     L  G   C STG +AARTA VMD  L  +YGG   R+  +W  P+ W
Sbjct:  101 RSYAECQRMVEAFASRKLPLFVAYYRRALPRFVKARDLVQGGAVGTLTGVLYRCCEPRHREPANPL--PWRLIAEQSGGGIFMDLGSHTLDIIDYIVGPLQEVTGIAANVAS-------SYDVEDVVAMSFRTPCGAAGSATWNFASDYRADEIEFIGTDGRLALSTFAEEPVRLHRGQSLETFDIRHPPHVQQPLIQTIVDQLLGRG--TCPSTGESAARTARVMDIVLAGYYGG---RNDAWWTRPDSW 337          
BLAST of mRNA_M-pyrifera_M_contig8960.20771.1 vs. uniprot
Match: UPI0019BADB42 (Gfo/Idh/MocA family oxidoreductase n=1 Tax=Chthonomonadaceae bacterium TaxID=2739509 RepID=UPI0019BADB42)

HSP 1 Score: 175 bits (443), Expect = 2.020e-47
Identity = 106/264 (40.15%), Postives = 142/264 (53.79%), Query Frame = 1
Query:    1 RSYAECLDMTEAFEAAKLPLYIGYYRRYLPKFVYVKSVLDSGAIGSVTSVSLRLSQSRHKFEGEEVRA--------------DWRVDATNAGGGLFMDLGSHQLDLLDHLVGPLKPRGGAAHRLRPTSGLPGPSYAVEDVVCLAFETSSGALGTASWNFCSGVWEDTIEIIGELGSISFSCFNNKPVRLEVAAKV------SPREGDASIATTSHNGLSVGGLCCSSTGRAAARTALVMDRALEEFYGGPGSRDKPFWETPEKW 732
            RSY ECL++TE F  A LPL++ YYRR L +F+  + ++ +G IG+V+ +  R S S HK    +                  WR+DAT AGGGLF+DLG H LD++D +VG L+   G A       G    ++AVED V L+F T +GA+G+A WNF S   ED I+I G  G I+ S F N+PV LE   +       +P      +  T  + L   G C  STG  A RT+ VMD AL  +Y G   R+  FW  PE W
Sbjct:   99 RSYRECLEITETFAKANLPLFVAYYRRGLDRFLKAQELVQTGKIGTVSGILYRFSSSAHKARQRDAETLFPYSPTTEMKTELPWRLDATEAGGGLFLDLGCHTLDIIDFIVGELQDVSGEA-------GNVASAHAVEDCVTLSFRTETGAVGSALWNFASAFSEDMIQITGTEGRITLSTFGNEPVLLETGEETVTFDLPNPDTIQQPLIQTIVDALHGKGEC-PSTGITATRTSRVMDIALSGYYRG---REDAFWTRPETW 351          
BLAST of mRNA_M-pyrifera_M_contig8960.20771.1 vs. uniprot
Match: A0A517Z0W5_9PLAN (1,5-anhydro-D-fructose reductase n=1 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517Z0W5_9PLAN)

HSP 1 Score: 174 bits (441), Expect = 4.060e-47
Identity = 102/251 (40.64%), Postives = 144/251 (57.37%), Query Frame = 1
Query:    1 RSYAECLDMTEAFEAAKLPLYIGYYRRYLPKFVYVKSVLDSGAIGSVTSVSLRLSQSRHKFEGEEVRADWRVDATNAGGGLFMDLGSHQLDLLDHLVGPL-KPRGGAAHRLRPTSGLPGPSYAVEDVVCLAFETSSGALGTASWNFCSGVWEDTIEIIGELGSISFSCFNNKPVRLEVAAKV------SPREGDASIATTSHNGLSVGGLCCSSTGRAAARTALVMDRALEEFYGGPGSRDKPFWETPEKW 732
            R+  EC +M +AF+A  +PL++ YYRR LP+F+ V+ ++  G +G++T VS R  +        + +  WR+ A  +GGGLF D+GSH LD+LD ++GPL +  G AA+R        G +Y VED V ++F T SG  G A+WNF S    D +E+ G  G +S + F N PVRLE   ++      SP      +  +  N L   G CCS TG +AARTA VMDRA+  +YG   SR   FW  P+ W
Sbjct:  106 RNATECREMVDAFKARNIPLFVAYYRRALPRFLKVQELVADGRLGTLTQVSYRYDRPEWPDLNRQ-QLPWRLQAVESGGGLFFDVGSHVLDILDFVLGPLGEVEGTAANR--------GGAYEVEDSVAMSFRTRSGIPGAATWNFSSCCSRDCLELTGTAGQLSLAVFGNSPVRLERDGRIEEIDLPSPEHIQQPMIQSIVNTLLGRGECCS-TGESAARTAAVMDRAVGRYYG---SRADQFWTDPQCW 343          
BLAST of mRNA_M-pyrifera_M_contig8960.20771.1 vs. uniprot
Match: A0A1G4A1J3_9BACT (GFO_IDH_MocA_C domain-containing protein n=1 Tax=Verrucomicrobia bacterium RIFCSPLOWO2_12_FULL_64_8 TaxID=1802434 RepID=A0A1G4A1J3_9BACT)

HSP 1 Score: 170 bits (431), Expect = 4.890e-47
Identity = 105/242 (43.39%), Postives = 135/242 (55.79%), Query Frame = 1
Query:   25 MTEAFEAAKLPLYIGYYRRYLPKFVYVKSVLDSGAIGSVTSVSLRLSQSRHKFEGEEVRADWRVDATNAGGGLFMDLGSHQLDLLDHLVGPLKPRGGAAHRLRPTSGLPGPSYAVEDVVCLAFETSSGALGTASWNFCSGVWEDTIEIIGELGSISFSCFNNKPVRLEVAAKVS------PREGDASIATTSHNGLSVGGLCCSSTGRAAARTALVMDRALEEFYGGPGSRDKPFWETPEKW 732
            M +AF  A+LPL++ YYRR LP+F+  KS+L  G++G +T VS   ++  H   G      WR++A  AGGGLF+DLGSH LDLLD L GPL    GAA  L         SY VED V L+F T SG  G A+WNF SGV ED I I G  G ++ S F N+P+RLE AA  +      P      +     + L   G    STGR A RT+ V+D+ L+ +YGG   R+  FW     W
Sbjct:    1 MVKAFVGARLPLFVAYYRRALPRFLKAKSLLAEGSLGRLTGVSYHYAEPGHLTLGTG-SLPWRLEAAAAGGGLFLDLGSHTLDLLDFLFGPLAQVAGAAANLAS-------SYEVEDTVGLSFVTKSGVPGVAAWNFASGVREDAIRITGTKGRLTLSTFGNEPLRLETAAGANEFNLPNPPHVQQPLIQMIVDELRGKGRS-PSTGRTARRTSRVIDKVLKAYYGG---RNDDFWNRSATW 230          
BLAST of mRNA_M-pyrifera_M_contig8960.20771.1 vs. uniprot
Match: UPI001996D0E6 (Gfo/Idh/MocA family oxidoreductase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=UPI001996D0E6)

HSP 1 Score: 171 bits (434), Expect = 4.080e-46
Identity = 106/251 (42.23%), Postives = 139/251 (55.38%), Query Frame = 1
Query:    1 RSYAECLDMTEAFEAAKLPLYIGYYRRYLPKFVYVKSVLDSGAIGSVTSVSLRLSQSRHKFEGEEVRADWRVDATNAGGGLFMDLGSHQLDLLDHLVGPL-KPRGGAAHRLRPTSGLPGPSYAVEDVVCLAFETSSGALGTASWNFCSGVWEDTIEIIGELGSISFSCFNNKPVRLEVAAKVS------PREGDASIATTSHNGLSVGGLCCSSTGRAAARTALVMDRALEEFYGGPGSRDKPFWETPEKW 732
            RS  EC  + EAF A   P+++ YYRR LP+F  V  +L +G +G +T +++R +        + +   WR+DA NAGGGLF+DLGSH LDLLDHL+GPL + +G AA    P   LP     VED V ++F T  G  G A+W+F S +  D I I G  G + FS F N+PVRLE  A V       P      +  T  + L +G   C STG  A RT+ VMD  LE +YGG   R   FW  P+ W
Sbjct:  110 RSTVECDTILEAFRATNTPVFVAYYRRCLPRFEQVAELLAAGELGRLTGINVRYACPAPHIA-DPLHPPWRLDAANAGGGLFLDLGSHTLDLLDHLLGPLTRVQGHAASVATP---LP-----VEDAVAMSFATEGGLPGVAAWDFASALPSDEIIIAGTAGRLVFSTFGNEPVRLETRAGVREFDRPHPSHVQQPLIQTVVDAL-LGRGECPSTGENARRTSAVMDAVLESYYGG---RSDAFWTRPDTW 347          
BLAST of mRNA_M-pyrifera_M_contig8960.20771.1 vs. uniprot
Match: A0A1V5WXK2_9DELT (Glucose--fructose oxidoreductase n=1 Tax=Deltaproteobacteria bacterium ADurb.Bin207 TaxID=1852869 RepID=A0A1V5WXK2_9DELT)

HSP 1 Score: 169 bits (428), Expect = 2.720e-45
Identity = 99/253 (39.13%), Postives = 136/253 (53.75%), Query Frame = 1
Query:    1 RSYAECLDMTEAFEAAKLPLYIGYYRRYLPKFVYVKSVLDSGAIGSVTSVSLRLSQSRHKFEGEEVRADWRVDATNAGGGLFMDLGSHQLDLLDHLVGPLKPRGGAAHRLRPTSGLPGPSYAVEDVVCLAFETSSGALGTASWNFCSGVWEDTIEIIGELGSISFSCFNNKPVRLEVAAKVSPREGDASIATTSHNGLSV---------GGLCCSSTGRAAARTALVMDRALEEFYGGPGSRDKPFWETPEKW 732
            R + EC  M EAF  A+LPL++ YYRR LP+F+ V ++L+ GA+G++T++      + H+     +   WR+DA  AG GLF+DLG H LD+LD L+GP+    G+A+ +  T       Y VEDVV + F+      G ASWNF     ED ++I G  G +  S F + P+RL    +      D  IA   H    +         G   C STG  AART+LVMD  L+ +YGG   R   FWE PE W
Sbjct:  105 RHFPECQAMLEAFTHARLPLFVAYYRRKLPRFLTVAALLEQGALGTITAIRYHYGSASHRKPLSPL--PWRLDAARAGAGLFLDLGCHVLDILDFLLGPVHHIQGSAYNVAST-------YDVEDVVLMTFQVGKAIPGVASWNFAQQQHEDCLDIEGTDGHLRLSVFGDSPIRLTRGKE----HRDLRIANPPHIQQPLIESIVDDLLGRGTCPSTGTTAARTSLVMDTVLDGYYGG---RQDRFWERPESW 341          
BLAST of mRNA_M-pyrifera_M_contig8960.20771.1 vs. uniprot
Match: A0A017SUP0_9DELT (Oxidoreductase n=2 Tax=Chondromyces apiculatus TaxID=51 RepID=A0A017SUP0_9DELT)

HSP 1 Score: 168 bits (425), Expect = 9.270e-45
Identity = 99/253 (39.13%), Postives = 138/253 (54.55%), Query Frame = 1
Query:    1 RSYAECLDMTEAFEAAKLPLYIGYYRRYLPKFVYVKSVLDSGAIGSVTSVSLRLSQSRHKFEGEEVRADWRVDATNAGGGLFMDLGSHQLDLLDHLVGPLKPRGGAAHRLRPTSGLPGPSYAVEDVVCLAFETSSGALGTASWNFCSGVWEDTIEIIGELGSISFSCFNNKPVRL------EVAAKVSPREGDASIATTSHNGLSVGGLCCSSTGRAAARTALVMDRALEEFYGGPGSRDKPFWETPEKWATA 741
            RSY EC  M EAFEAA +PL++ YYRR LP+FV  + V+D+G +G++T V+ R +  R  +EG      WR+    +GGGLF+D+G H LDLL+ L+GPL+   G A  +         +  +ED + + F T  GALG A WNF     ED IEI G    +  S F ++P+ +      E   + +P      +  +  + L   G C  STG +AART+ VMD  L+ +YGG   R   FW  PE W  A
Sbjct:  114 RSYEECKRMNEAFEAADVPLFVAYYRRRLPRFVTAREVIDAGRLGAITGVTYRYTHPR--WEGTPADRPWRLRPEYSGGGLFLDIGCHTLDLLEFLLGPLRNVSGMAANVST-------NCTIEDNIAMHFRTEQGALGVAHWNFAGHAREDLIEITGTDARLRMSTFGDEPLEIITRGNVETMTRPNPMHVQQPLIQSIVDHLRGQGEC-PSTGYSAARTSRVMDVVLDAYYGG---RADDFWLRPETWPGA 353          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8960.20771.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGC9_ECTSI2.970e-12564.86Oxidoreductase domain protein n=2 Tax=Ectocarpus T... [more]
A0A4P5STC7_9BACT2.380e-5143.43Oxidoreductase n=1 Tax=Armatimonadetes bacterium T... [more]
A0A7V2CXB7_9BACT3.680e-5043.08Gfo/Idh/MocA family oxidoreductase n=1 Tax=Chthoni... [more]
A0A7C4IJP0_9BACT5.030e-5042.23Gfo/Idh/MocA family oxidoreductase n=1 Tax=Phycisp... [more]
UPI0019BADB422.020e-4740.15Gfo/Idh/MocA family oxidoreductase n=1 Tax=Chthono... [more]
A0A517Z0W5_9PLAN4.060e-4740.641,5-anhydro-D-fructose reductase n=1 Tax=Maioricim... [more]
A0A1G4A1J3_9BACT4.890e-4743.39GFO_IDH_MocA_C domain-containing protein n=1 Tax=V... [more]
UPI001996D0E64.080e-4642.23Gfo/Idh/MocA family oxidoreductase n=1 Tax=Burkhol... [more]
A0A1V5WXK2_9DELT2.720e-4539.13Glucose--fructose oxidoreductase n=1 Tax=Deltaprot... [more]
A0A017SUP0_9DELT9.270e-4539.13Oxidoreductase n=2 Tax=Chondromyces apiculatus Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8960contigM-pyrifera_M_contig8960:142..3019 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score364.8
Seed ortholog evalue3.2e-98
Seed eggNOG ortholog2880.D8LGC9
Hectar predicted targeting categoryother localisation
EggNOG free text desc.D-xylose 1-dehydrogenase (NADP ) activity
EggNOG OGsCOG0673@1,KOG2741@2759
Ec32 ortholog descriptionoxidoreductase domain protein
Ec32 orthologEc-06_002570.1
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1246
Cds size735
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8960.20771.1prot_M-pyrifera_M_contig8960.20771.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig8960 166..2532 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816806.8921106-UTR-M-pyrifera_M_contig8960:141..1651622816806.8921106-UTR-M-pyrifera_M_contig8960:141..165Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8960 142..165 +
1692278189.88522-UTR-M-pyrifera_M_contig8960:141..1651692278189.88522-UTR-M-pyrifera_M_contig8960:141..165Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8960 142..165 +
1622816806.9662523-UTR-M-pyrifera_M_contig8960:2532..30191622816806.9662523-UTR-M-pyrifera_M_contig8960:2532..3019Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8960 2533..3019 +
1692278189.9612992-UTR-M-pyrifera_M_contig8960:2532..30191692278189.9612992-UTR-M-pyrifera_M_contig8960:2532..3019Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8960 2533..3019 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816806.9053342-CDS-M-pyrifera_M_contig8960:165..2061622816806.9053342-CDS-M-pyrifera_M_contig8960:165..206Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8960 166..206 +
1692278189.9037592-CDS-M-pyrifera_M_contig8960:165..2061692278189.9037592-CDS-M-pyrifera_M_contig8960:165..206Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8960 166..206 +
1622816806.9219275-CDS-M-pyrifera_M_contig8960:904..10961622816806.9219275-CDS-M-pyrifera_M_contig8960:904..1096Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8960 905..1096 +
1692278189.9219966-CDS-M-pyrifera_M_contig8960:904..10961692278189.9219966-CDS-M-pyrifera_M_contig8960:904..1096Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8960 905..1096 +
1622816806.936565-CDS-M-pyrifera_M_contig8960:1844..21491622816806.936565-CDS-M-pyrifera_M_contig8960:1844..2149Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8960 1845..2149 +
1692278189.9343286-CDS-M-pyrifera_M_contig8960:1844..21491692278189.9343286-CDS-M-pyrifera_M_contig8960:1844..2149Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8960 1845..2149 +
1622816806.9498093-CDS-M-pyrifera_M_contig8960:2335..25321622816806.9498093-CDS-M-pyrifera_M_contig8960:2335..2532Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8960 2336..2532 +
1692278189.9506762-CDS-M-pyrifera_M_contig8960:2335..25321692278189.9506762-CDS-M-pyrifera_M_contig8960:2335..2532Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8960 2336..2532 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig8960.20771.1

>prot_M-pyrifera_M_contig8960.20771.1 ID=prot_M-pyrifera_M_contig8960.20771.1|Name=mRNA_M-pyrifera_M_contig8960.20771.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=245bp
MTEAFEAAKLPLYIGYYRRYLPKFVYVKSVLDSGAIGSVTSVSLRLSQSR
HKFEGEEVRADWRVDATNAGGGLFMDLGSHQLDLLDHLVGPLKPRGGAAH
RLRPTSGLPGPSYAVEDVVCLAFETSSGALGTASWNFCSGVWEDTIEIIG
ELGSISFSCFNNKPVRLEVAAKVSPREGDASIATTSHNGLSVGGLCCSST
GRAAARTALVMDRALEEFYGGPGSRDKPFWETPEKWATAADTST*
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mRNA from alignment at M-pyrifera_M_contig8960:142..3019+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig8960.20771.1 ID=mRNA_M-pyrifera_M_contig8960.20771.1|Name=mRNA_M-pyrifera_M_contig8960.20771.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2878bp|location=Sequence derived from alignment at M-pyrifera_M_contig8960:142..3019+ (Macrocystis pyrifera P11B4 male)
AGGAGCTATGCCGAGTGCCTTGACATGACGGAGGCGTTCGAGGCCGCCAA GCTCCCGTTGTACATGTGAGCCTCTGATCGGTTGCTGTCGTGCGTTTATA GTACTGTCGCATACCCAGAATGTAGTACCGAATGTGCCCGCGAGGAACAA GTTGTCTGTTATTGTTTCGTTTTTTCCTCTGCTTTGTGCATCATCGAATC GAGCGCTTGCCCCGAGCCTCGCGCTCTGCGAAAACGTACCGGCGATCGAC CGTGTCTATCCCCTCCGTAGTTCGGCCTTTGCTGTGAGCTCACTATTATA CCTCGCCGCAAGCTTCGCGTGGCTCTCACGCATCGATCGCAAGGTTGCCG CCGAGTTCTTTTCTCAACCCTTCTGTTACTTCTAAACTGGTCCCCCCCCC TCCCCTGAAATCCAAGTAGCTTGTCCCAAAACCGTGGATGAAGTTCATGG GGATTTAAACCTTTTCGCTATTACAAGGGGCAATAGAAATGAGATCCCAC GGTAGACCGAAAAAACACGTATTCCGGAAAATTAACGCACCATTTTTTGT TCTAATTTCTGTGTTGCCCCGTGATCGCACTTTTAATATTACCATAAGAA ACCAAGTCGAGTTTCAAGTAATTCCCCCCCCGATAAGCGGGTGCCGTTCT AAAAAAGGGGGTTCATTAAACCTTTTTTCTAGCTTCTTGCCGACTCAGCA ATAGCTTACCGACGGCTTTTACCGGCGGAATCGTTCGCAACTTTTCGGCT CTCTTGTTGACAGCGGGTACTATCGACGATATCTCCCCAAGTTCGTGTAC GTGAAGTCCGTCCTTGACTCGGGCGCCATCGGGAGCGTGACGAGCGTCAG CCTCCGACTGTCGCAGTCTCGCCACAAGTTCGAGGGGGAGGAGGTCCGCG CTGATTGGAGGGTTGACGCGACCAACGCCGGCGGCGGGCTCTTCATGGAC CTCGGGTAGGGCGCACACGACCTTTTCGCCTCCTCGCTTGGCCTTCGATC TCGTCCTTGGTTCCTCACCTTTTGCCCTTCGCCCTTTGAAGTTTTTTTTG TTTTTTTTTTCGGTTGCCCAAGCCAACCGGCACCCTTCCCCGGCCGTGCT ACTCGGTTTGCAGGCCTTGTTGGCGTGTTTTTCTTCGTGCTTTTGTGCCA TGCGTTGTTCTCCTGCGGTGTTTTTGCTGGGCGGGTGGTTCGCCTATGCA CATGCGCGTGTGTGTTGTATGTACGTCGGTGCGTCGTATTTGCATGGGGA TGGATGTTTTCGTCGTTCAGAGTGTATGGTGCTAGTAAATAGCGCCGTTG CTATGATGCGTTGTTTGAATGAACTGCGTACCAGCCTGGCGAAGGCGGGC GAGGGTGGATGATCCGTTCTACCCCGAGCGGTCTTGTTGCTTGCAGAGAG GTGTATATTTTTGTCAAATTCAAATTTGCGGTAATACCTCAAGGGAGCAT TCGTTACGTTTTCGCCGGTATGATACGTTCCCTGTACGTATTCCCCACGT AATTTCACGCCGGCGGTAGTAAAAGTACTATTCAAAAAGGTGCCTTTCTA GCCGTTCACTCTTTGGTCTAACTTCCCAAGCATACCAAAAGATGGCCTAC CATCATTTTAGACAACCTTGTTTGGGTCTGCCATCGTATGGCCTAACCGA GGGTACGTAACCCACACGCGTCCCCCTTTGGTCTTTGCTCCAAACCTCCC CAGGTCTCACCAGCTCGACCTCCTAGACCACCTGGTCGGCCCGCTGAAGC CACGCGGGGGCGCTGCGCACCGCTTGAGACCCACCTCAGGTTTGCCCGGC CCGTCTTACGCCGTCGAGGACGTCGTATGCCTCGCGTTCGAGACGTCCTC GGGCGCCCTGGGCACCGCCTCTTGGAACTTCTGCTCCGGGGTCTGGGAGG ACACGATCGAGATTATCGGCGAGTTAGGTTCGATTTCGTTCTCGTGCTTC AACAACAAGCCCGTGCGGCTGGAGGTGGCGGCGAAGGTATCGCCGCGGGA GGGCGACGGTGAGTCGCCGGGCGCCCACAACGCCTCCGGACCCTCCCTCC TCGCGCGAGTAGAACGCCTAAAAGAGCCCGAGGTGACCCTGCACCAGGCG GATCAGCCGGACCACGTGCACCAGCCTCTGGTCGAAGCGATGCTGCGAGA CTTGCGCCTGTGGTCGTCCCTCCCCGCCGGGTCCTCGGAGAAAGCCTCCA TCGCGACCACGTCGCATAATGGCCTATCGGTCGGAGGCCTCTGCTGCAGC AGCACCGGTCGAGCGGCCGCTCGCACGGCGCTCGTTATGGACCGAGCCCT GGAAGAATTCTACGGAGGCCCCGGCAGCCGGGACAAGCCGTTTTGGGAAA CCCCGGAGAAGTGGGCGACGGCGGCAGACACGTCGACCTGAAAAAAAAAA AGCTTTGGCAGGGATAGGATATAGCGCGAGCATGCTGATCCCTGGTCACA CGCGCGGGAAGTGAAGTGTGCGCGCCGTCATGCTGGCGGGGGTCGTGTCG TTGCTTTGTTTGGCGTGGTTTGGTTGGTTGATGGAAGGTGACGTGGTGTC TGGCAAGCGGTAAACTTACAGTAGCATAATTTCTCGCCGCGCTCTGCCTA ATGCTGCCCAGAGGGGATACGTATACAGCTGCAACGAGCGCGGCAGCAAG CCGTGCGTGAGACAACGTGCAATCTGCAAAGACGACATATGTACCCACCG AAACGACTTTGCAACGAGTATTACTTGTCTTTGCTTCGACAGCTGCAAGT AATGATGGGCTTGCTCTCTGTGCTCAGAGTAGAGTAGCAAGCAGTTGGCG GGATGGGCGAGGGCATGGCCATCAAAATCGCACCACACCCGCCGGCGAAG AGGCAGGCTGCGTCTCGGAAGCCTTGAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig8960:142..3019+

>mRNA_M-pyrifera_M_contig8960.20771.1 ID=mRNA_M-pyrifera_M_contig8960.20771.1|Name=mRNA_M-pyrifera_M_contig8960.20771.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1470bp|location=Sequence derived from alignment at M-pyrifera_M_contig8960:142..3019+ (Macrocystis pyrifera P11B4 male)
ATGACGGAGGCGTTCGAGGCCGCCAAGCTCCCGTTGTACATATGACGGAG
GCGTTCGAGGCCGCCAAGCTCCCGTTGTACATCGGGTACTATCGACGATA
TCTCCCCAAGTTCGTGTACGTGAAGTCCGTCCTTGACTCGGGCGCCATCG
GGAGCGTGACGAGCGTCAGCCTCCGACTGTCGCAGTCTCGCCACAAGTTC
GAGGGGGAGGAGGTCCGCGCTGATTGGAGGGTTGACGCGACCAACGCCGG
CGGCGGGCTCTTCATGGACCTCGGCGGGTACTATCGACGATATCTCCCCA
AGTTCGTGTACGTGAAGTCCGTCCTTGACTCGGGCGCCATCGGGAGCGTG
ACGAGCGTCAGCCTCCGACTGTCGCAGTCTCGCCACAAGTTCGAGGGGGA
GGAGGTCCGCGCTGATTGGAGGGTTGACGCGACCAACGCCGGCGGCGGGC
TCTTCATGGACCTCGGGTCTCACCAGCTCGACCTCCTAGACCACCTGGTC
GGCCCGCTGAAGCCACGCGGGGGCGCTGCGCACCGCTTGAGACCCACCTC
AGGTTTGCCCGGCCCGTCTTACGCCGTCGAGGACGTCGTATGCCTCGCGT
TCGAGACGTCCTCGGGCGCCCTGGGCACCGCCTCTTGGAACTTCTGCTCC
GGGGTCTGGGAGGACACGATCGAGATTATCGGCGAGTTAGGTTCGATTTC
GTTCTCGTGCTTCAACAACAAGCCCGTGCGGCTGGAGGTGGCGGCGAAGG
TATCGCCGCGGGAGGGCGACGGTCTCACCAGCTCGACCTCCTAGACCACC
TGGTCGGCCCGCTGAAGCCACGCGGGGGCGCTGCGCACCGCTTGAGACCC
ACCTCAGGTTTGCCCGGCCCGTCTTACGCCGTCGAGGACGTCGTATGCCT
CGCGTTCGAGACGTCCTCGGGCGCCCTGGGCACCGCCTCTTGGAACTTCT
GCTCCGGGGTCTGGGAGGACACGATCGAGATTATCGGCGAGTTAGGTTCG
ATTTCGTTCTCGTGCTTCAACAACAAGCCCGTGCGGCTGGAGGTGGCGGC
GAAGGTATCGCCGCGGGAGGGCGACGCCTCCATCGCGACCACGTCGCATA
ATGGCCTATCGGTCGGAGGCCTCTGCTGCAGCAGCACCGGTCGAGCGGCC
GCTCGCACGGCGCTCGTTATGGACCGAGCCCTGGAAGAATTCTACGGAGG
CCCCGGCAGCCGGGACAAGCCGTTTTGGGAAACCCCGGAGAAGTGGGCGA
CGGCGGCAGACACGTCGACCTGACCTCCATCGCGACCACGTCGCATAATG
GCCTATCGGTCGGAGGCCTCTGCTGCAGCAGCACCGGTCGAGCGGCCGCT
CGCACGGCGCTCGTTATGGACCGAGCCCTGGAAGAATTCTACGGAGGCCC
CGGCAGCCGGGACAAGCCGTTTTGGGAAACCCCGGAGAAGTGGGCGACGG
CGGCAGACACGTCGACCTGA
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