mRNA_M-pyrifera_M_contig89535.20756.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig89535.20756.1
Unique NamemRNA_M-pyrifera_M_contig89535.20756.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig89535.20756.1 vs. uniprot
Match: A0A6B1G7H6_9ACTN (RecQ family ATP-dependent DNA helicase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A6B1G7H6_9ACTN)

HSP 1 Score: 275 bits (704), Expect = 2.650e-81
Identity = 146/264 (55.30%), Postives = 182/264 (68.94%), Query Frame = 1
Query:    4 IRERLGFSDWRPGQLEIMRAFTKGEDVLAILPTGTGKSLTYQLPALIRPGLTIVVSPLVALMRDQVESLRERGLTRVAAIFSGQAQSEQEEILSRAAAGAYKLLYVSPERLWSQRFRAGLQDVHVGRIAVDEAHCIAQWGHTFRPEYAQIPAAI-----------------AAITQGTRPAVLAATATATPEVQSEIVSSLRLELTTTHTAHPDRPELHYYVEPCGTLDDRRLKALQVVDAFRGQSAIVYVPKQAMAQEIAELL 744
            +RE  GF  WRPGQLE MR F  G+D L++LPTG+GKS+TYQ+PAL+ PG+T+V+SPL++LM DQVE+LR RG+  VAAI SG  QSE  +IL  A  G YKLLYVSPERLWSQ F + L +VHV RIA+DEAHCI+QWGHTFRPEYA+IP AI                 AA    +RP +LA TATA  +V+ EIV  L L+        PDRPE+ YY E C T  DR ++  QV++AFR Q+A+VYVP +  A+ I+ LL
Sbjct: 1052 VREIFGFERWRPGQLETMRHFMAGDDALSVLPTGSGKSITYQIPALLMPGVTLVLSPLISLMNDQVENLRRRGIPEVAAIHSGVGQSEWRDILRGARRGDYKLLYVSPERLWSQEFISRLAEVHVARIAIDEAHCISQWGHTFRPEYARIPEAIRRLAEARAADHPGARSAAASPVNSRPPLLAVTATANAKVREEIVKLLDLDCGEMTVLSPDRPEISYYTEDCATRSDRDVRIAQVIEAFRRQAAVVYVPTRRDAERISGLL 1315          
BLAST of mRNA_M-pyrifera_M_contig89535.20756.1 vs. uniprot
Match: A0A6N8ZZC1_9ACTN (RecQ family ATP-dependent DNA helicase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6N8ZZC1_9ACTN)

HSP 1 Score: 274 bits (700), Expect = 9.040e-81
Identity = 143/246 (58.13%), Postives = 181/246 (73.58%), Query Frame = 1
Query:    7 RERLGFSDWRPGQLEIMRAFTKGEDVLAILPTGTGKSLTYQLPALIRPGLTIVVSPLVALMRDQVESLRERGLTRVAAIFSGQAQSEQEEILSRAAAGAYKLLYVSPERLWSQRFRAGLQDVHVGRIAVDEAHCIAQWGHTFRPEYAQIPAAIAAITQGTRPAVLAATATATPEVQSEIVSSLRLELTTTHTAHPDRPELHYYVEPCGTLDDRRLKALQVVDAFRGQSAIVYVPKQAMAQEIAELL 744
            RE LGF +WRP Q EIM++F +GEDV+A+LPTG+GKS+T+Q+PAL+ PG+T+V+SPLVALMRDQV++LR +G++  AAI+SG  Q+EQ +IL  AAAG  KLLYVSPERLWS  FR+ L  V V RIA+DEAHCI+ WGH+FRPEYA IP A+A  T   R   LAATATATP V  ++   L L   T      +RPE+ YYVE C  L DR L+ +QV++AFR +SAIVYVP +     +A LL
Sbjct: 1026 REWLGFKEWRPFQQEIMKSFIRGEDVVAVLPTGSGKSVTFQVPALLSPGVTLVISPLVALMRDQVDNLRAQGISEAAAIYSGIGQAEQRDILRAAAAGHIKLLYVSPERLWSPAFRSWLSKVDVQRIAIDEAHCISMWGHSFRPEYALIPEAVAEATSSRRLPTLAATATATPRVLEDVGRLLELPDPTIMVGSANRPEIRYYVERCTKLSDRDLRVVQVLEAFRRRSAIVYVPTRNDTGRLASLL 1271          
BLAST of mRNA_M-pyrifera_M_contig89535.20756.1 vs. uniprot
Match: A0A6B0ZE13_9ACTN (RecQ family ATP-dependent DNA helicase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0ZE13_9ACTN)

HSP 1 Score: 272 bits (695), Expect = 4.250e-80
Identity = 145/251 (57.77%), Postives = 181/251 (72.11%), Query Frame = 1
Query:    7 RERLGFSDWRPGQLEIMRAFTKGEDVLAILPTGTGKSLTYQLPALIRPGLTIVVSPLVALMRDQVESLRERGLTRVAAIFSGQAQSEQEEILSRAAAGAYKLLYVSPERLWSQRFRAGLQDVHVGRIAVDEAHCIAQWGHTFRPEYAQIPAAIAAITQGTRPAVLAATATATPEVQSEIVSSLRLELTTTHTAHP-----DRPELHYYVEPCGTLDDRRLKALQVVDAFRGQSAIVYVPKQAMAQEIAELL 744
            R  LGF  WRPGQ E+M  F + EDV+A+LPTG+GKS+TYQ+PAL+ PG+T+VVSPL+ALMRDQV++LR RG++ VAAI+SG +Q+EQE +L  AA G  KLLYVSPERLWS  FRA L++V V RIAVDEAHCI+ WGH+FRPEYA IP A+AA   G R  V A TATAT EV  +IV  L ++        P     DRPE+ YYVE C    DR L+ +Q+V+AFR +SA+VYVP +     +A LL
Sbjct: 1024 RRWLGFDQWRPGQQEVMGRFMRAEDVVAVLPTGSGKSVTYQIPALVSPGVTLVVSPLIALMRDQVDNLRSRGVSEVAAIYSGVSQAEQEAVLRSAAQGHIKLLYVSPERLWSPVFRAWLEEVPVARIAVDEAHCISLWGHSFRPEYAMIPRAVAAAVSGRRLPVAAVTATATREVLDDIVRLLDIQ----PDGEPLVGSVDRPEIRYYVERCRNRKDRDLRVVQIVEAFRRRSAVVYVPTRNDTHRLAALL 1270          
BLAST of mRNA_M-pyrifera_M_contig89535.20756.1 vs. uniprot
Match: A0A6L7XCP0_9ACTN (RecQ family ATP-dependent DNA helicase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6L7XCP0_9ACTN)

HSP 1 Score: 271 bits (692), Expect = 1.070e-79
Identity = 142/237 (59.92%), Postives = 179/237 (75.53%), Query Frame = 1
Query:    1 LIRERLGFSDWRPGQLEIMRAFTKGEDVLAILPTGTGKSLTYQLPALIRPGLTIVVSPLVALMRDQVESLRERGLTRVAAIFSGQAQSEQEEILSRAAAGAYKLLYVSPERLWSQRFRAGLQDVHVGRIAVDEAHCIAQWGHTFRPEYAQIPAAIAAITQGTRPAVLAATATATPEVQSEIVSSLRLELTTTHTAHP-DRPELHYYVEPCGTLDDRRLKALQVVDAFRGQSAIVYVP 708
            + R+ LGF +WRPGQ ++M  F +GEDV+A+LPTG+GKS+TYQ+PAL+ PG+T+VVSPL+ALMRDQV++LR RG++ VAAI+SG  Q+EQE +L  A  G  KLLYVSPERLWS  FRA L+DV+V RIAVDEAHCI+ WGH+FRPEYA IP AIAA   G  P V A TATAT +V  ++   L+L+          DRPE+ YYVE C    DR L+A+QVV+AFR +SA+VYVP
Sbjct: 1019 IARQWLGFDEWRPGQQDVMSRFMRGEDVVAVLPTGSGKSITYQIPALMSPGVTLVVSPLIALMRDQVDNLRSRGVSEVAAIYSGVGQAEQEAVLRSARQGHIKLLYVSPERLWSPLFRAWLKDVNVTRIAVDEAHCISLWGHSFRPEYAMIPRAIAAAVGGRVP-VAAVTATATADVLEDVTRLLKLQRKNAPVVGSVDRPEICYYVERCQNRKDRDLRAVQVVEAFRRRSAVVYVP 1254          
BLAST of mRNA_M-pyrifera_M_contig89535.20756.1 vs. uniprot
Match: A0A6N9ESA9_9ACTN (RecQ family ATP-dependent DNA helicase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N9ESA9_9ACTN)

HSP 1 Score: 265 bits (678), Expect = 8.180e-78
Identity = 142/249 (57.03%), Postives = 175/249 (70.28%), Query Frame = 1
Query:    4 IRERLGFSDWRPGQLEIMRAFTKGEDVLAILPTGTGKSLTYQLPALIRPGLTIVVSPLVALMRDQVESLRERGLTRVAAIFSGQAQSEQEEILSRAAAGAYKLLYVSPERLWSQRFRAGLQDVHVGRIAVDEAHCIAQWGHTFRPEYAQIPAAIAAITQG-TRPAVLAATATATPEVQSEIVSSLRLELTTTHTA-HPDRPELHYYVEPCGTLDDRRLKALQVVDAFRGQSAIVYVPKQAMAQEIAELL 744
            +R+  GF  WRPGQLE M  F +G D LA+LPTG+GKS+T+Q+PAL+ PG+T+VVSPL ALM DQVE+LR RG+T+VAAI SG  Q+E  +IL  AA G YKLLY+SPERLWSQ F   L  V   R+AVDEAHCI+QWGH+FRPEYA IP A+  I  G  RP VLA TATAT  V+ +IV  L L L     +  P RPE+ Y+VE C    DR ++ +Q+V+AFR Q AIVYVP +     +A LL
Sbjct: 1049 LRQMFGFRRWRPGQLETMSRFIEGSDFLAVLPTGSGKSITFQIPALLSPGVTLVVSPLKALMNDQVENLRARGITKVAAIHSGVGQAEWRDILRGAARGDYKLLYISPERLWSQEFVGALAGVGAARVAVDEAHCISQWGHSFRPEYAAIPDALRRIASGGARPPVLAVTATATESVRHDIVRLLGLRLAGAPVSLSPGRPEIRYFVEKCHDRADRDVRVVQIVEAFRSQPAIVYVPTRRDTARVAGLL 1297          
BLAST of mRNA_M-pyrifera_M_contig89535.20756.1 vs. uniprot
Match: A0A7K2B2T4_9ACTN (RecQ family ATP-dependent DNA helicase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7K2B2T4_9ACTN)

HSP 1 Score: 264 bits (675), Expect = 2.060e-77
Identity = 141/249 (56.63%), Postives = 175/249 (70.28%), Query Frame = 1
Query:    4 IRERLGFSDWRPGQLEIMRAFTKGEDVLAILPTGTGKSLTYQLPALIRPGLTIVVSPLVALMRDQVESLRERGLTRVAAIFSGQAQSEQEEILSRAAAGAYKLLYVSPERLWSQRFRAGLQDVHVGRIAVDEAHCIAQWGHTFRPEYAQIPAAIAAITQGTRPAVLAATATATPEVQSEIVSSLRLELTTTH--TAHPDRPELHYYVEPCGTLDDRRLKALQVVDAFRGQSAIVYVPKQAMAQEIAELL 744
            +RER GF  WR GQL++MR F  G D LA+LPTG+GKS+T+Q+PALI PGLT+V+SPL ALM DQVE+LR RG+T+VAAI SG  Q E  ++L  A  G YKLLYVSPERLWSQ F   L  + V R+AVDEAHCI+QWGH+FRPEY  IPAA+  I +  RP  LA TATA PEV+ EI   L L L      +  PDRPE+ Y+VE C    DR L+ +Q+ ++F G++AIVYVP +     +A LL
Sbjct: 1010 VRERFGFERWRRGQLDVMRRFIGGADTLAVLPTGSGKSITFQIPALISPGLTLVISPLTALMNDQVENLRARGVTQVAAIHSGIPQGEWRDVLRGAERGDYKLLYVSPERLWSQEFVRTLARIGVARVAVDEAHCISQWGHSFRPEYTTIPAALGRIGEP-RPPALAVTATAIPEVRGEINELLGLHLAGAEPISLSPDRPEIRYFVENCKNRHDRDLRVVQIAESFWGRAAIVYVPTRKDTTRLAGLL 1257          
BLAST of mRNA_M-pyrifera_M_contig89535.20756.1 vs. uniprot
Match: A0A6G2JTK7_9ACTN (RecQ family ATP-dependent DNA helicase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A6G2JTK7_9ACTN)

HSP 1 Score: 262 bits (670), Expect = 9.750e-77
Identity = 138/264 (52.27%), Postives = 179/264 (67.80%), Query Frame = 1
Query:    4 IRERLGFSDWRPGQLEIMRAFTKGEDVLAILPTGTGKSLTYQLPALIRPGLTIVVSPLVALMRDQVESLRERGLTRVAAIFSGQAQSEQEEILSRAAAGAYKLLYVSPERLWSQRFRAGLQDVHVGRIAVDEAHCIAQWGHTFRPEYAQIPAAIAAITQG-----------------TRPAVLAATATATPEVQSEIVSSLRLELTTTHTAHPDRPELHYYVEPCGTLDDRRLKALQVVDAFRGQSAIVYVPKQAMAQEIAELL 744
            +RE  GF  WR GQLE M+ F  G+D  ++LPTG+GKS+TYQ+PAL+  G+T+V+SPL++LM DQVE+LR RG++ VAAI SG  QSE  +IL  A  G YKLLYVSPERLWSQ F + L +V V RIA+DEAHCI+QWGHTFRPEYA+IP AI  + +                  +RP +LA TATA  +V+ EIV  L L+        PDRPE+ YY E C    DR ++ +QV++AFR Q+A+VYVP +  A+ I+ LL
Sbjct: 1050 VREIFGFEQWRHGQLETMQRFMAGDDAFSVLPTGSGKSITYQIPALLMQGVTLVLSPLISLMNDQVENLRRRGISAVAAIHSGVGQSEWRDILRGARRGDYKLLYVSPERLWSQEFISRLAEVDVARIAIDEAHCISQWGHTFRPEYARIPEAIGRLAEARAADRPGARNAAASPVDSRPPLLAVTATANAKVREEIVQLLDLDSGEPTVLSPDRPEISYYTEDCANRSDRDVRIVQVIEAFRRQAAVVYVPTRRDAERISGLL 1313          
BLAST of mRNA_M-pyrifera_M_contig89535.20756.1 vs. uniprot
Match: A0A7W0RBQ1_9ACTN (ATP-dependent DNA helicase RecQ (Fragment) n=1 Tax=Thermoleophilaceae bacterium TaxID=2732252 RepID=A0A7W0RBQ1_9ACTN)

HSP 1 Score: 187 bits (476), Expect = 4.510e-55
Identity = 120/250 (48.00%), Postives = 154/250 (61.60%), Query Frame = 1
Query:    4 IRERLGFSDWRPGQLEIMRAFTKGEDVLAILPTGTGKSLTYQLPALIRPGLTIVVSPLVALMRDQVESLRERGLTRVAAIFSGQAQSEQE-EILSRAAAGAYKLLYVSPERLWSQRFRAGLQDVHVGRIAVDEAHCIAQWGHTFRPEYAQIPAAIAAITQGTRPAVLAATATATPEVQSEIVSSLRLELTTTHTAHPDRPELHYYVEPCGTLDDRRL--KALQVVDAFRGQSAIVYVPKQAMAQEIAELL 744
            +    GF+ +RPGQ E   A   G DVL ++PTG+GKSL YQLPAL+R  LTIVVSPLVALM+DQVE+L  RGL    A+ + Q   EQ  E+L RA AG  +LLYV+PER  S  F  G+++  VG   VDEAHC++QWGH FRP+Y ++  A AA   G R A++A+TATATP V  ++V  L L          DRP + + V      + R L  +AL+  DA     AIVY   +A A+EIAE L
Sbjct:   56 LERHFGFTGFRPGQREACEAALAGRDVLVVMPTGSGKSLCYQLPALMRDDLTIVVSPLVALMQDQVEALHARGLGDAVALVNAQQDGEQNAEVLRRAVAGRLRLLYVAPERFSSLGFLTGVKEARVGLFVVDEAHCVSQWGHDFRPDYFRL--ADAARHLGAR-AIVASTATATPRVALDVVRRLGLREPLRVATGFDRPNISFAVARPAPHEKRTLIAQALRREDAL---PAIVYAGTRAGAEEIAEQL 299          
BLAST of mRNA_M-pyrifera_M_contig89535.20756.1 vs. uniprot
Match: UPI00195D915F (ATP-dependent DNA helicase n=1 Tax=Desulforadius tongensis TaxID=1216062 RepID=UPI00195D915F)

HSP 1 Score: 193 bits (491), Expect = 7.730e-54
Identity = 117/250 (46.80%), Postives = 158/250 (63.20%), Query Frame = 1
Query:    4 IRERLGFSDWRPGQLEIMRAFTKGEDVLAILPTGTGKSLTYQLPALIRPGLTIVVSPLVALMRDQVESLRERGLTRVAAIFSGQAQSEQEEILSRAAAGAYKLLYVSPERLWSQRFRAGLQDVHVGRIAVDEAHCIAQWGHTFRPEYAQIPAAIAAITQGTRPAVLAATATATPEVQSEIVSSLRLELTTTHTAHPDRPELHYYVE--PCGTLDDRRLKAL-QVVDAFRGQSAIVYVPKQAMAQEIAELL 744
            + +  GF D+RPGQ EI+     G DVLA++PTG GKSL YQLP L+ PG+T+V+SPLVALM+DQV+SL  R L +V  + S   + EQ E L     G YKL+YV+PERL ++ F + L D+ +  + VDEAHCI+QWGH FRP+Y  +   I +I    RP VLA TATATP VQ +I+  L +E      A  DRP L+  V   P G+    +L+AL +V+ A RG S I+Y   +   +E+A+ L
Sbjct:    8 LHKYFGFEDFRPGQREIIEKVMAGSDVLAVMPTGRGKSLCYQLPGLMLPGVTLVISPLVALMKDQVDSLHTRNLHQVTLLNSQLTREEQRERLRGIKRGEYKLIYVAPERLRTRSFSSLLADMPLTLLVVDEAHCISQWGHDFRPDYLYLREFIESIAN--RPRVLALTATATPRVQQDILKQLGIENAVKVAAGSDRPNLYLEVRRLPGGS---SKLQALAEVLTAERG-SGIIYTATRKETEEVAQFL 251          
BLAST of mRNA_M-pyrifera_M_contig89535.20756.1 vs. uniprot
Match: R9LD94_9ACTN (DNA helicase n=10 Tax=Terrabacteria group TaxID=1783272 RepID=R9LD94_9ACTN)

HSP 1 Score: 193 bits (490), Expect = 8.150e-54
Identity = 114/245 (46.53%), Postives = 152/245 (62.04%), Query Frame = 1
Query:    1 LIRERLGFSDWRPGQLEIMRAFTKGEDVLAILPTGTGKSLTYQLPALIRPGLTIVVSPLVALMRDQVESLRERGLTRVAAIFSGQAQSEQEEILSRAAAGAYKLLYVSPERLWSQRFRAGLQDVHVGRIAVDEAHCIAQWGHTFRPEYAQIPAAIAAITQGTRPAVLAATATATPEVQSEIVSSLRLELTTTHTAHPDRPELHYYVEPCGTL-DDRRLKALQVVDAFRGQSAIVYVPKQAMAQEI 732
            ++ E  G+ D+RPGQ  ++ A   G D LA++PTG GKS+ YQ+PA++ PG+T+VVSPLV+LM DQV SL+E G+ R A + S    ++Q E+L+RA AGAY L+YV+PERL   RF A      +  +AVDEAHC++QWG  FRP Y  I   IAA+    RP V A TATAT  V+++IV  L L          DRP L + VE C     D RL A   +D  R +S IVY  K+A  +E+
Sbjct:   15 VLAEHFGYRDFRPGQEAVVAAVLSGRDALAVMPTGAGKSVCYQVPAVVLPGMTVVVSPLVSLMADQVRSLKEAGI-RGAFLNSSLTAAQQAEVLARAQAGAYDLMYVAPERLADPRFTAFAASASIPFVAVDEAHCVSQWGQDFRPSYLAIGEFIAALP--VRPVVAALTATATERVRADIVRLLDLRDPALTVTGFDRPNLRFAVERCEPKRKDARLDAF--IDERRAESGIVYCSKRACVEEV 254          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89535.20756.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6B1G7H6_9ACTN2.650e-8155.30RecQ family ATP-dependent DNA helicase n=1 Tax=Aci... [more]
A0A6N8ZZC1_9ACTN9.040e-8158.13RecQ family ATP-dependent DNA helicase n=1 Tax=Aci... [more]
A0A6B0ZE13_9ACTN4.250e-8057.77RecQ family ATP-dependent DNA helicase n=1 Tax=Aci... [more]
A0A6L7XCP0_9ACTN1.070e-7959.92RecQ family ATP-dependent DNA helicase n=2 Tax=Aci... [more]
A0A6N9ESA9_9ACTN8.180e-7857.03RecQ family ATP-dependent DNA helicase (Fragment) ... [more]
A0A7K2B2T4_9ACTN2.060e-7756.63RecQ family ATP-dependent DNA helicase n=1 Tax=Aci... [more]
A0A6G2JTK7_9ACTN9.750e-7752.27RecQ family ATP-dependent DNA helicase n=1 Tax=Aci... [more]
A0A7W0RBQ1_9ACTN4.510e-5548.00ATP-dependent DNA helicase RecQ (Fragment) n=1 Tax... [more]
UPI00195D915F7.730e-5446.80ATP-dependent DNA helicase n=1 Tax=Desulforadius t... [more]
R9LD94_9ACTN8.150e-5446.53DNA helicase n=10 Tax=Terrabacteria group TaxID=17... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89535contigM-pyrifera_M_contig89535:8..751 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score195.7
Seed ortholog evalue2.6e-47
Seed eggNOG ortholog1380390.JIAT01000009_gene1479
KEGG koko:K03654
KEGG Pathwayko03018,map03018
Hectar predicted targeting categoryother localisation
EggNOG free text desc.helicase superfamily c-terminal domain
EggNOG OGs2GJSS@201174,4CPUN@84995,COG0514@1,COG0514@2
EC3.6.4.12
COG Functional cat.L
Best tax levelRubrobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03400
Exons1
Model size744
Cds size744
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816805.9406097-CDS-M-pyrifera_M_contig89535:7..7511622816805.9406097-CDS-M-pyrifera_M_contig89535:7..751Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89535 8..751 -
1692278189.308077-CDS-M-pyrifera_M_contig89535:7..7511692278189.308077-CDS-M-pyrifera_M_contig89535:7..751Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89535 8..751 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89535.20756.1prot_M-pyrifera_M_contig89535.20756.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig89535 8..751 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig89535.20756.1

>prot_M-pyrifera_M_contig89535.20756.1 ID=prot_M-pyrifera_M_contig89535.20756.1|Name=mRNA_M-pyrifera_M_contig89535.20756.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=248bp
LIRERLGFSDWRPGQLEIMRAFTKGEDVLAILPTGTGKSLTYQLPALIRP
GLTIVVSPLVALMRDQVESLRERGLTRVAAIFSGQAQSEQEEILSRAAAG
AYKLLYVSPERLWSQRFRAGLQDVHVGRIAVDEAHCIAQWGHTFRPEYAQ
IPAAIAAITQGTRPAVLAATATATPEVQSEIVSSLRLELTTTHTAHPDRP
ELHYYVEPCGTLDDRRLKALQVVDAFRGQSAIVYVPKQAMAQEIAELL
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mRNA from alignment at M-pyrifera_M_contig89535:8..751-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig89535.20756.1 ID=mRNA_M-pyrifera_M_contig89535.20756.1|Name=mRNA_M-pyrifera_M_contig89535.20756.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=744bp|location=Sequence derived from alignment at M-pyrifera_M_contig89535:8..751- (Macrocystis pyrifera P11B4 male)
CTGATCCGAGAGCGCCTCGGGTTCAGCGATTGGCGTCCGGGCCAGCTCGA GATCATGCGTGCCTTCACGAAGGGTGAGGACGTCCTGGCCATCCTTCCCA CCGGTACCGGCAAGTCACTGACTTATCAGCTTCCTGCGCTCATTCGGCCC GGGCTGACGATCGTGGTCTCTCCACTGGTTGCACTCATGCGAGACCAAGT CGAGAGTCTGCGCGAGCGTGGTCTCACAAGGGTTGCAGCGATCTTCTCCG GGCAGGCCCAGAGCGAACAGGAGGAGATCCTTTCGCGGGCAGCCGCCGGT GCGTACAAGTTGCTCTACGTGTCGCCTGAACGATTGTGGTCACAGCGGTT CCGCGCTGGGTTGCAGGATGTTCATGTGGGCCGCATAGCTGTCGACGAGG CTCATTGCATCGCACAGTGGGGACACACCTTCCGCCCTGAATATGCGCAG ATCCCAGCAGCGATTGCCGCTATCACTCAGGGGACTCGACCGGCTGTGCT CGCAGCGACGGCCACGGCGACCCCGGAGGTGCAATCCGAGATCGTTTCGT CGTTGCGACTTGAGCTCACAACGACGCATACGGCCCACCCCGACCGTCCC GAACTCCACTACTACGTCGAGCCGTGCGGAACCCTCGATGATCGTCGACT CAAGGCGCTTCAAGTTGTTGATGCCTTCCGCGGTCAGTCCGCCATCGTCT ACGTGCCAAAGCAGGCGATGGCGCAAGAGATCGCAGAACTGCTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig89535:8..751-

>mRNA_M-pyrifera_M_contig89535.20756.1 ID=mRNA_M-pyrifera_M_contig89535.20756.1|Name=mRNA_M-pyrifera_M_contig89535.20756.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1488bp|location=Sequence derived from alignment at M-pyrifera_M_contig89535:8..751- (Macrocystis pyrifera P11B4 male)
CTGATCCGAGAGCGCCTCGGGTTCAGCGATTGGCGTCCGGGCCAGCTCGA
GATCATGCGTGCCTTCACGAAGGGTGAGGACGTCCTGGCCATCCTTCCCA
CCGGTACCGGCAAGTCACTGACTTATCAGCTTCCTGCGCTCATTCGGCCC
GGGCTGACGATCGTGGTCTCTCCACTGGTTGCACTCATGCGAGACCAAGT
CGAGAGTCTGCGCGAGCGTGGTCTCACAAGGGTTGCAGCGATCTTCTCCG
GGCAGGCCCAGAGCGAACAGGAGGAGATCCTTTCGCGGGCAGCCGCCGGT
GCGTACAAGTTGCTCTACGTGTCGCCTGAACGATTGTGGTCACAGCGGTT
CCGCGCTGGGTTGCAGGATGTTCATGTGGGCCGCATAGCTGTCGACGAGG
CTCATTGCATCGCACAGTGGGGACACACCTTCCGCCCTGAATATGCGCAG
ATCCCAGCAGCGATTGCCGCTATCACTCAGGGGACTCGACCGGCTGTGCT
CGCAGCGACGGCCACGGCGACCCCGGAGGTGCAATCCGAGATCGTTTCGT
CGTTGCGACTTGAGCTCACAACGACGCATACGGCCCACCCCGACCGTCCC
GAACTCCACTACTACGTCGAGCCGTGCGGAACCCTCGATGATCGTCGACT
CAAGGCGCTTCAAGTTGTTGATGCCTTCCGCGGTCAGTCCGCCATCGTCT
ACGTGCCAAAGCAGGCGATGGCGCAAGAGATCGCAGAACTGCTGCTGATC
CGAGAGCGCCTCGGGTTCAGCGATTGGCGTCCGGGCCAGCTCGAGATCAT
GCGTGCCTTCACGAAGGGTGAGGACGTCCTGGCCATCCTTCCCACCGGTA
CCGGCAAGTCACTGACTTATCAGCTTCCTGCGCTCATTCGGCCCGGGCTG
ACGATCGTGGTCTCTCCACTGGTTGCACTCATGCGAGACCAAGTCGAGAG
TCTGCGCGAGCGTGGTCTCACAAGGGTTGCAGCGATCTTCTCCGGGCAGG
CCCAGAGCGAACAGGAGGAGATCCTTTCGCGGGCAGCCGCCGGTGCGTAC
AAGTTGCTCTACGTGTCGCCTGAACGATTGTGGTCACAGCGGTTCCGCGC
TGGGTTGCAGGATGTTCATGTGGGCCGCATAGCTGTCGACGAGGCTCATT
GCATCGCACAGTGGGGACACACCTTCCGCCCTGAATATGCGCAGATCCCA
GCAGCGATTGCCGCTATCACTCAGGGGACTCGACCGGCTGTGCTCGCAGC
GACGGCCACGGCGACCCCGGAGGTGCAATCCGAGATCGTTTCGTCGTTGC
GACTTGAGCTCACAACGACGCATACGGCCCACCCCGACCGTCCCGAACTC
CACTACTACGTCGAGCCGTGCGGAACCCTCGATGATCGTCGACTCAAGGC
GCTTCAAGTTGTTGATGCCTTCCGCGGTCAGTCCGCCATCGTCTACGTGC
CAAAGCAGGCGATGGCGCAAGAGATCGCAGAACTGCTG
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