mRNA_M-pyrifera_M_contig89468.20738.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig89468.20738.1
Unique NamemRNA_M-pyrifera_M_contig89468.20738.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig89468.20738.1 vs. uniprot
Match: A0A813A808_9DINO (Hgsnat protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813A808_9DINO)

HSP 1 Score: 151 bits (382), Expect = 4.800e-40
Identity = 76/152 (50.00%), Postives = 94/152 (61.84%), Query Frame = 1
Query:    4 ERTASSGKRRVEAIDTFRGICLSIMIFVNYGGGGYWWLDHSRWDGLTVADLVFPAFVWTMGASMALSHRGMRRRGQKIARSAGXXXXXXXXXXEEDWRVDASKKTVVRAVKLYLLGMFLNGCANLENCRIPGVLQYFGVATFIVGFADIWIP 459
            E  AS+ K RV +IDTFRG+ L+IMIFVNYGGGGYW+ DHSRW+GLTVADLVFP FVW  G S+A+S     RR                       R     K  +RA+KLY LG+FLN   +L N RIPGVLQYF ++  +V F  +++P
Sbjct:  275 EGRASAAKTRVRSIDTFRGLALAIMIFVNYGGGGYWFFDHSRWNGLTVADLVFPWFVWISGTSLAISIDSQLRRSVP--------------------RKKIMMKAAIRAIKLYALGLFLNNGVDLSNWRIPGVLQYFSISGLLVTFVALFVP 406          
BLAST of mRNA_M-pyrifera_M_contig89468.20738.1 vs. uniprot
Match: A0A5A8CLA6_CAFRO (HGSNAT_cat domain-containing protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CLA6_CAFRO)

HSP 1 Score: 150 bits (380), Expect = 2.170e-39
Identity = 77/153 (50.33%), Postives = 95/153 (62.09%), Query Frame = 1
Query:    7 RTASSGKRRVEAIDTFRGICLSIMIFVNYGGGGYWWLDHSRWDGLTVADLVFPAFVWTMGASMALSHRGMRRRGQKIARSAGXXXXXXXXXXEEDWRVDASKKTVVRAVKLYLLGMFLN--GCANLENCRIPGVLQYFGVATFIVGFADIWIP 459
            R +++  +RV AID +RG CL IM+FVNYGGGGYWWLDHS W+GLTVAD+VF  FV+TMGASMALS R  R++G                      R   S +   RA KL  +G+FLN  G + L   R+PGVLQYF VA  +V   DIW+P
Sbjct:  332 RASAAPSQRVHAIDIWRGTCLLIMVFVNYGGGGYWWLDHSAWNGLTVADIVFACFVFTMGASMALSLRSQRKKGAT--------------------RCAMSGRMAWRAAKLLAVGLFLNTNGGSTLNQWRLPGVLQYFAVAALVVSLIDIWMP 464          
BLAST of mRNA_M-pyrifera_M_contig89468.20738.1 vs. uniprot
Match: A0A812UN92_9DINO (Hgsnat protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812UN92_9DINO)

HSP 1 Score: 137 bits (345), Expect = 4.440e-35
Identity = 75/166 (45.18%), Postives = 98/166 (59.04%), Query Frame = 1
Query:   13 ASSGK----RRVEAIDTFRGICLSIMIFVNYGG------------GGYWWLDHSRWDGLTVADLVFPAFVWTMGASMALSHRGMRRRGQKIARSAGXXXXXXXXXXEEDWRVDASKKTVVRAVKLYLLGM-FLNGCANLENCRIPGVLQYFGVATFIVGFADIWIP 459
            A+SG+     RV++ID FRG  L IM+FVNYGG            G YW+ DHS W GLTVADLVFP F+WTMG  MALS  G RRRG                     W +  +++ + RA KL +LG+  ++  ++L N RIPGVLQYF VAT +VG +++W+P
Sbjct:  159 AASGRPDSNSRVKSIDAFRGAALCIMVFVNYGGTSGVDDMGGSGGGNYWFFDHSAWFGLTVADLVFPWFLWTMGVGMALSLAGQRRRGVS------------------KWTM--TRRLLARAAKLAVLGIAIIDNASDLSNARIPGVLQYFAVATVLVGLSEVWLP 304          
BLAST of mRNA_M-pyrifera_M_contig89468.20738.1 vs. uniprot
Match: A0A7M5X9N0_9CNID (DUF5009 domain-containing protein n=4 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5X9N0_9CNID)

HSP 1 Score: 133 bits (335), Expect = 1.690e-33
Identity = 62/142 (43.66%), Postives = 93/142 (65.49%), Query Frame = 1
Query:   28 RRVEAIDTFRGICLSIMIFVNYGGGGYWWLDHSRWDGLTVADLVFPAFVWTMGASMALSHRGMRRRGQKIARSAGXXXXXXXXXXEEDWRVDASKKTVVRAVKLYLLGMFLNGCANLENCRIPGVLQYFGVATFIVGFADIW 453
            +R+ ++DTFRGI + +MIFVNYGGG YW+ +HS+W+GLTVADLVFP F++ MGAS+ +S R MRR+                       ++  +KK +VR++KL+ LG+F+N   + E+ RIPGVLQ F ++  +V   ++W
Sbjct:  238 KRLRSLDTFRGISIVVMIFVNYGGGKYWFFNHSKWNGLTVADLVFPWFIFIMGASIFISCRSMRRKTIP--------------------KITITKKIIVRSIKLFALGLFINNGKDYEHWRIPGVLQRFALSYLVVAILNVW 359          
BLAST of mRNA_M-pyrifera_M_contig89468.20738.1 vs. uniprot
Match: C3ZPW2_BRAFL (DUF5009 domain-containing protein (Fragment) n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3ZPW2_BRAFL)

HSP 1 Score: 128 bits (321), Expect = 1.240e-32
Identity = 67/137 (48.91%), Postives = 85/137 (62.04%), Query Frame = 1
Query:   28 RRVEAIDTFRGICLSIMIFVNYGGGGYWWLDHSRWDGLTVADLVFPAFVWTMGASMALSHRGMRRRGQKIARSAGXXXXXXXXXXEEDWRVDASKKTVVRAVKLYLLGMFL-NGCANLENCRIPGVLQYFGVATFIV 435
            RR++++DTFRG+CL IM FVNYGGGGYW+LDHS W+G+TVADLVFP F+W MG S ALS RG++R+        G                    K V R + L+LLG+F+ N   +    RIPGVLQ F V+ F V
Sbjct:    1 RRLKSLDTFRGMCLCIMAFVNYGGGGYWFLDHSVWNGITVADLVFPWFMWIMGTSTALSFRGLQRKATPKLTIFG--------------------KIVRRTITLFLLGLFIVNAPDDWATIRIPGVLQRFAVSYFAV 117          
BLAST of mRNA_M-pyrifera_M_contig89468.20738.1 vs. uniprot
Match: A0A7M6DL77_9CNID (DUF5009 domain-containing protein n=2 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M6DL77_9CNID)

HSP 1 Score: 126 bits (316), Expect = 1.370e-32
Identity = 62/150 (41.33%), Postives = 93/150 (62.00%), Query Frame = 1
Query:   28 RRVEAIDTFRGICLSIMIFVNYGGGGYWWLDHSRWDGLTVADLVFPAFVWTMGASMALSHRGMRRRGQKIARSAGXXXXXXXXXXEEDWRVDASKKTVVRAVKLYLLGMFLNGCANL--------ENCRIPGVLQYFGVATFIVGFADIW 453
            +R+ ++DTFRGI + +MIFVNYGGG YW+ +HS+W+GLTVADLVFP F++ MGAS+ +S R +RR+                       ++  +KK +VR++KL+ LG+F+N    L        E+ RIPGVLQ F ++  +V   ++W
Sbjct:   86 KRLRSLDTFRGISILVMIFVNYGGGKYWFFNHSKWNGLTVADLVFPWFIFIMGASIFISCRSIRRKTIP--------------------KITITKKIIVRSIKLFALGLFINNGIKLRSMKWKDYEHWRIPGVLQRFALSYLVVAILNVW 215          
BLAST of mRNA_M-pyrifera_M_contig89468.20738.1 vs. uniprot
Match: A0A6P4ZIN9_BRABE (heparan-alpha-glucosaminide N-acetyltransferase-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4ZIN9_BRABE)

HSP 1 Score: 129 bits (325), Expect = 2.550e-32
Identity = 68/146 (46.58%), Postives = 90/146 (61.64%), Query Frame = 1
Query:    1 KERTASSGKRRVEAIDTFRGICLSIMIFVNYGGGGYWWLDHSRWDGLTVADLVFPAFVWTMGASMALSHRGMRRRGQKIARSAGXXXXXXXXXXEEDWRVDASKKTVVRAVKLYLLGMFL-NGCANLENCRIPGVLQYFGVATFIV 435
            K+  ++S  RR++++DTFRG+CL IM FVNYGGGGYW+ DHS W+G+TVADLVFP F+W MG S ALS RG++R+                       +V    K V R + L+LLG+F+ N   +    RIPGVLQ F V+ F V
Sbjct:  148 KKSESASKPRRLKSLDTFRGMCLCIMAFVNYGGGGYWFFDHSVWNGITVADLVFPWFMWIMGTSTALSFRGLQRKATP--------------------KVTIFLKVVRRTITLFLLGLFIVNSPDDWYKIRIPGVLQRFAVSYFAV 273          
BLAST of mRNA_M-pyrifera_M_contig89468.20738.1 vs. uniprot
Match: C3YL82_BRAFL (DUF5009 domain-containing protein (Fragment) n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YL82_BRAFL)

HSP 1 Score: 128 bits (321), Expect = 6.810e-32
Identity = 67/153 (43.79%), Postives = 90/153 (58.82%), Query Frame = 1
Query:   13 ASSGKRRVEAIDTFRGICLSIMIFVNYGGGGYWWLDHSRWDGLTVADLVFPAFVWTMGASMALSHRGMRRRGQKIARSAGXXXXXXXXXXEEDWRVDASKKTVVRAVKLYLLGMFL----NGCANLENCRIPGVLQYFGVATFIVGFADIWIP 459
            AS G RR+ ++DTFRG+ L++M+FVNYGGGGYW+  H+RW+GLTVADLVFP FV+ MG S+ALS R + ++G                      R+    K + R V L+LLG+F+     G  +    RIPGVLQ   +  FIV   + W P
Sbjct:  114 ASQGIRRLRSLDTFRGLSLAVMVFVNYGGGGYWFFKHARWNGLTVADLVFPWFVFIMGTSIALSFRRLLKKGVS--------------------RLSLLWKVIQRTVILFLLGLFIINTKKGHNSWSTLRIPGVLQRLALTYFIVALMESWKP 246          
BLAST of mRNA_M-pyrifera_M_contig89468.20738.1 vs. uniprot
Match: UPI001603ABED (heparan-alpha-glucosaminide N-acetyltransferase-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001603ABED)

HSP 1 Score: 128 bits (321), Expect = 1.190e-31
Identity = 67/137 (48.91%), Postives = 85/137 (62.04%), Query Frame = 1
Query:   28 RRVEAIDTFRGICLSIMIFVNYGGGGYWWLDHSRWDGLTVADLVFPAFVWTMGASMALSHRGMRRRGQKIARSAGXXXXXXXXXXEEDWRVDASKKTVVRAVKLYLLGMFL-NGCANLENCRIPGVLQYFGVATFIV 435
            RR++++DTFRG+CL IM FVNYGGGGYW+LDHS W+G+TVADLVFP F+W MG S ALS RG++R+        G                    K V R + L+LLG+F+ N   +    RIPGVLQ F V+ F V
Sbjct:  197 RRLKSLDTFRGMCLCIMAFVNYGGGGYWFLDHSVWNGITVADLVFPWFMWIMGTSTALSFRGLQRKATPKLTIFG--------------------KIVRRTITLFLLGLFIVNAPDDWATIRIPGVLQRFAVSYFAV 313          
BLAST of mRNA_M-pyrifera_M_contig89468.20738.1 vs. uniprot
Match: F0ZTI8_DICPU (DUF5009 domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZTI8_DICPU)

HSP 1 Score: 128 bits (321), Expect = 1.570e-31
Identity = 66/152 (43.42%), Postives = 92/152 (60.53%), Query Frame = 1
Query:    4 ERTASSGKRRVEAIDTFRGICLSIMIFVNYGGGGYWWLDHSRWDGLTVADLVFPAFVWTMGASMALSHRGMRRRGQKIARSAGXXXXXXXXXXEEDWRVDASKKTVVRAVKLYLLGMFLNGCANLENCRIPGVLQYFGVATFIVGFADIWIP 459
            ER  +  K R++++D FRG  ++IMIFVNYGGGGYW+ +HS W+GLTVADLVFP FV+ MG +M LS   M RRG                      ++   +K V R+  L+ LG+F+N   NL++ RI GVLQ F ++  IVG   +++P
Sbjct:  198 ERENNKKKDRLKSLDVFRGFSITIMIFVNYGGGGYWFFNHSYWNGLTVADLVFPWFVFIMGIAMPLSFNAMERRGTT--------------------KLVIVQKLVRRSAILFALGLFINNGVNLQHWRILGVLQRFAISYLIVGLIMLFVP 329          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89468.20738.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A813A808_9DINO4.800e-4050.00Hgsnat protein n=1 Tax=Symbiodinium sp. KB8 TaxID=... [more]
A0A5A8CLA6_CAFRO2.170e-3950.33HGSNAT_cat domain-containing protein n=5 Tax=Cafet... [more]
A0A812UN92_9DINO4.440e-3545.18Hgsnat protein (Fragment) n=1 Tax=Symbiodinium sp.... [more]
A0A7M5X9N0_9CNID1.690e-3343.66DUF5009 domain-containing protein n=4 Tax=Clytia h... [more]
C3ZPW2_BRAFL1.240e-3248.91DUF5009 domain-containing protein (Fragment) n=1 T... [more]
A0A7M6DL77_9CNID1.370e-3241.33DUF5009 domain-containing protein n=2 Tax=Clytia h... [more]
A0A6P4ZIN9_BRABE2.550e-3246.58heparan-alpha-glucosaminide N-acetyltransferase-li... [more]
C3YL82_BRAFL6.810e-3243.79DUF5009 domain-containing protein (Fragment) n=1 T... [more]
UPI001603ABED1.190e-3148.91heparan-alpha-glucosaminide N-acetyltransferase-li... [more]
F0ZTI8_DICPU1.570e-3143.42DUF5009 domain-containing protein n=1 Tax=Dictyost... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89468contigM-pyrifera_M_contig89468:345..803 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score129.0
Seed ortholog evalue1.9e-27
Seed eggNOG ortholog7739.XP_002589330.1
Preferred nameHGSNAT
KEGG koko:K10532
KEGG ReactionR07815
KEGG Pathwayko00531,ko01100,ko04142,map00531,map01100,map04142
KEGG ModuleM00078
Hectar predicted targeting categoryother localisation
GOsGO:0000323,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005773,GO:0005774,GO:0005886,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0006810,GO:0006887,GO:0006955,GO:0007034,GO:0007041,GO:0008080,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0012505,GO:0012506,GO:0015019,GO:0016020,GO:0016043,GO:0016192,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0022607,GO:0030141,GO:0030203,GO:0030659,GO:0030667,GO:0031090,GO:0031410,GO:0031982,GO:0032940,GO:0035579,GO:0036230,GO:0042119,GO:0042581,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043299,GO:0043312,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046903,GO:0050896,GO:0051179,GO:0051234,GO:0051259,GO:0065003,GO:0070820,GO:0070821,GO:0071704,GO:0071840,GO:0071944,GO:0097708,GO:0098588,GO:0098805,GO:0098852,GO:0099503,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575
EggNOG free text desc.Heparan-alpha-glucosaminide N-acetyltransferase
EggNOG OGs38EYA@33154,3BFWA@33208,3D07S@33213,488FW@7711,COG4299@1,KOG4683@2759
EC2.3.1.78
COG Functional cat.S
Best tax levelChordata
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size459
Cds size459
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816804.8884058-CDS-M-pyrifera_M_contig89468:344..8031622816804.8884058-CDS-M-pyrifera_M_contig89468:344..803Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89468 345..803 +
1692278188.733277-CDS-M-pyrifera_M_contig89468:344..8031692278188.733277-CDS-M-pyrifera_M_contig89468:344..803Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89468 345..803 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89468.20738.1prot_M-pyrifera_M_contig89468.20738.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig89468 345..803 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig89468.20738.1

>prot_M-pyrifera_M_contig89468.20738.1 ID=prot_M-pyrifera_M_contig89468.20738.1|Name=mRNA_M-pyrifera_M_contig89468.20738.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=153bp
KERTASSGKRRVEAIDTFRGICLSIMIFVNYGGGGYWWLDHSRWDGLTVA
DLVFPAFVWTMGASMALSHRGMRRRGQKIARSAGGGGGGGGDGGEEDWRV
DASKKTVVRAVKLYLLGMFLNGCANLENCRIPGVLQYFGVATFIVGFADI
WIP
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mRNA from alignment at M-pyrifera_M_contig89468:345..803+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig89468.20738.1 ID=mRNA_M-pyrifera_M_contig89468.20738.1|Name=mRNA_M-pyrifera_M_contig89468.20738.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=459bp|location=Sequence derived from alignment at M-pyrifera_M_contig89468:345..803+ (Macrocystis pyrifera P11B4 male)
AAAGAGCGCACTGCGAGCTCGGGCAAGCGTCGTGTGGAAGCCATTGACAC GTTCCGAGGCATTTGCCTGTCCATCATGATCTTCGTCAACTATGGCGGAG GAGGATACTGGTGGCTCGACCATTCTCGCTGGGACGGTCTCACAGTCGCC GATCTCGTGTTCCCGGCATTCGTGTGGACCATGGGCGCATCCATGGCTCT CTCCCACCGCGGTATGCGGCGCAGGGGACAGAAAATTGCAAGAAGTGCAG GTGGTGGGGGTGGAGGTGGTGGGGATGGTGGGGAGGAGGATTGGAGGGTG GATGCGTCCAAGAAGACTGTGGTGCGTGCTGTGAAGCTGTACCTCCTGGG CATGTTTCTCAACGGATGCGCCAATTTGGAAAACTGCAGAATCCCCGGAG TGTTGCAGTATTTCGGAGTGGCGACTTTTATCGTCGGCTTCGCTGACATT TGGATCCCA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig89468:345..803+

>mRNA_M-pyrifera_M_contig89468.20738.1 ID=mRNA_M-pyrifera_M_contig89468.20738.1|Name=mRNA_M-pyrifera_M_contig89468.20738.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=918bp|location=Sequence derived from alignment at M-pyrifera_M_contig89468:345..803+ (Macrocystis pyrifera P11B4 male)
AAAGAGCGCACTGCGAGCTCGGGCAAGCGTCGTGTGGAAGCCATTGACAC
GTTCCGAGGCATTTGCCTGTCCATCATGATCTTCGTCAACTATGGCGGAG
GAGGATACTGGTGGCTCGACCATTCTCGCTGGGACGGTCTCACAGTCGCC
GATCTCGTGTTCCCGGCATTCGTGTGGACCATGGGCGCATCCATGGCTCT
CTCCCACCGCGGTATGCGGCGCAGGGGACAGAAAATTGCAAGAAGTGCAG
GTGGTGGGGGTGGAGGTGGTGGGGATGGTGGGGAGGAGGATTGGAGGGTG
GATGCGTCCAAGAAGACTGTGGTGCGTGCTGTGAAGCTGTACCTCCTGGG
CATGTTTCTCAACGGATGCGCCAATTTGGAAAACTGCAGAATCCCCGGAG
TGTTGCAGTATTTCGGAGTGGCGACTTTTATCGTCGGCTTCGCTGACATT
TGGATCCCAAAAGAGCGCACTGCGAGCTCGGGCAAGCGTCGTGTGGAAGC
CATTGACACGTTCCGAGGCATTTGCCTGTCCATCATGATCTTCGTCAACT
ATGGCGGAGGAGGATACTGGTGGCTCGACCATTCTCGCTGGGACGGTCTC
ACAGTCGCCGATCTCGTGTTCCCGGCATTCGTGTGGACCATGGGCGCATC
CATGGCTCTCTCCCACCGCGGTATGCGGCGCAGGGGACAGAAAATTGCAA
GAAGTGCAGGTGGTGGGGGTGGAGGTGGTGGGGATGGTGGGGAGGAGGAT
TGGAGGGTGGATGCGTCCAAGAAGACTGTGGTGCGTGCTGTGAAGCTGTA
CCTCCTGGGCATGTTTCTCAACGGATGCGCCAATTTGGAAAACTGCAGAA
TCCCCGGAGTGTTGCAGTATTTCGGAGTGGCGACTTTTATCGTCGGCTTC
GCTGACATTTGGATCCCA
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