mRNA_M-pyrifera_M_contig8945.20729.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8945.20729.1 vs. uniprot
Match: D8LMF2_ECTSI (Similar to Isochorismate Synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF2_ECTSI) HSP 1 Score: 163 bits (413), Expect = 2.070e-44 Identity = 92/126 (73.02%), Postives = 98/126 (77.78%), Query Frame = 1 Query: 1 LTEPFVSWCVSRDIDPAAGLFLSASMPCRDVE----------SAKGVFSGARGGGRLSDVASNRGASGIDGVVSSAIGYAAGLGAPVTLLIGDMATLHDLGSLHALRGLDAT-SHPVTVVCVNNGG 345 LTEPFV+WCVSR IDPAAGLFLSASMPCRDVE +G GG RLSDVASNRGASGIDGV SSA+GYAAGL + TLLIGDMATLHDLGSLHAL+GLDA S VT+VCVNNGG Sbjct: 1394 LTEPFVAWCVSRHIDPAAGLFLSASMPCRDVEVFADSGLGDLDGRGEEDRGSGGRRLSDVASNRGASGIDGVFSSAMGYAAGLRSAATLLIGDMATLHDLGSLHALKGLDAAGSCSVTMVCVNNGG 1519
BLAST of mRNA_M-pyrifera_M_contig8945.20729.1 vs. uniprot
Match: A0A6H5JV35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV35_9PHAE) HSP 1 Score: 152 bits (385), Expect = 1.210e-40 Identity = 93/150 (62.00%), Postives = 99/150 (66.00%), Query Frame = 1 Query: 1 LTEPFVSWCVSRDIDPAAGLFLSASMPCRDVE----------SAKGVFSGARGGGRLSDVASNRGASGIDGVVSSAIG------------------------YAAGLGAPVTLLIGDMATLHDLGSLHALRGLDAT-SHPVTVVCVNNGG 345 LTEPFV+WCVSR IDPAAGLFLSASMPCRDVE +G GG RLSDVASNRGASGIDGV SSA+G YAAGL + TLLIGDMATLHDLGSLHAL+GLDA S PVT+VCVNNGG Sbjct: 1112 LTEPFVAWCVSRHIDPAAGLFLSASMPCRDVEVFADSGLGDLDGRGEEDRGSGGRRLSDVASNRGASGIDGVSSSAMGCVPYARNTRRPMALPGFWHVLLLRYAAGLRSAATLLIGDMATLHDLGSLHALKGLDAAGSCPVTMVCVNNGG 1261
BLAST of mRNA_M-pyrifera_M_contig8945.20729.1 vs. uniprot
Match: A0A835ZAA5_9STRA (Thiamine diphosphate-binding protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAA5_9STRA) HSP 1 Score: 129 bits (325), Expect = 7.610e-35 Identity = 70/115 (60.87%), Postives = 84/115 (73.04%), Query Frame = 1 Query: 1 LTEPFVSWCVSRDIDPAAGLFLSASMPCRDVESAKGVFSGARGGGRLSDVASNRGASGIDGVVSSAIGYAAGLGAPVTLLIGDMATLHDLGSLHALRGLDATSHPVTVVCVNNGG 345 L EP ++ CVS + P AGLFLS SMPCRD+++ F+ G G L VA NRGA+GIDGVVSSA+GYA GL PVTLLIGDMA LHD+ +LH LR + HP+T+VCVNNGG Sbjct: 7 LVEPAIARCVSAHLSPGAGLFLSNSMPCRDMDT----FAQHSGPGNLCHVAMNRGANGIDGVVSSALGYAVGLRRPVTLLIGDMALLHDVNALHLLRQIP---HPITIVCVNNGG 114
BLAST of mRNA_M-pyrifera_M_contig8945.20729.1 vs. uniprot
Match: A0A4D9D2W1_9STRA (MR_MLE domain-containing protein n=6 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2W1_9STRA) HSP 1 Score: 112 bits (281), Expect = 1.290e-26 Identity = 68/122 (55.74%), Postives = 82/122 (67.21%), Query Frame = 1 Query: 1 LTEPFVSWCVSRDIDPAAGLFLSASMPCRDVESAKGVFSGARGGGR---LSDVASNRGASGIDGVVSSAIGYAAGLGAPVTLLIGDMATLHDLGSLHALRGLDATSH----PVTVVCVNNGG 345 L EP + V+R + GLFLS SMP RD+E+ + S L+ VA NRGASGIDG++SSA+GYAAGLG PVTLL+GDMA LHDL +LHAL G A++ PVTVV VNNGG Sbjct: 986 LNEPMTAHLVARLLPAGHGLFLSNSMPVRDMETFATLASTTAAPSAPAPLASVAMNRGASGIDGILSSAMGYAAGLGKPVTLLVGDMACLHDLNALHALSGASASASAPDTPVTVVLVNNGG 1107
BLAST of mRNA_M-pyrifera_M_contig8945.20729.1 vs. uniprot
Match: A0A7S1MXA8_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1MXA8_HEMAN) HSP 1 Score: 103 bits (256), Expect = 5.630e-26 Identity = 62/115 (53.91%), Postives = 74/115 (64.35%), Query Frame = 1 Query: 1 LTEPFVSWCVSRDIDPAAGLFLSASMPCRDVESAKGVFSGARGGGRLSDVASNRGASGIDGVVSSAIGYAAGLGAPVTLLIGDMATLHDLGSLHALRGLDATSHPVTVVCVNNGG 345 L EP+V++ + ++ LFLSASMP RD + +F VASNRGASGIDGVVSSA+GYA GL PVTLLIGD A LHDLG+L LR + PV V+ VNNGG Sbjct: 7 LDEPYVAFRTTTELREGGALFLSASMPVRDAD----MFLNPSARNPAVHVASNRGASGIDGVVSSALGYAQGLARPVTLLIGDGAALHDLGALRCLRD---SEQPVCVIVVNNGG 114
BLAST of mRNA_M-pyrifera_M_contig8945.20729.1 vs. uniprot
Match: A0A3M1NL11_9BACT (TPP_enzyme_C domain-containing protein (Fragment) n=1 Tax=Calditrichaeota bacterium TaxID=2212469 RepID=A0A3M1NL11_9BACT) HSP 1 Score: 100 bits (249), Expect = 5.190e-24 Identity = 56/115 (48.70%), Postives = 79/115 (68.70%), Query Frame = 1 Query: 1 LTEPFVSWCVSRDIDPAAGLFLSASMPCRDVESAKGVFSGARGGGRLSDVASNRGASGIDGVVSSAIGYAAGLGAPVTLLIGDMATLHDLGSLHALRGLDATSHPVTVVCVNNGG 345 LTEP ++W VSR I + LFL++SMP RD + +++ G ++ VA+NRGASGIDG ++SA+GY+ GL PV ++GD+A LHD+ SLH LR L SHP+ +V +NN G Sbjct: 6 LTEPGLAWTVSRSIPEDSALFLASSMPVRDFD----MYAFPSG---ITRVAANRGASGIDGTIASAVGYSRGLETPVIAVLGDLALLHDMNSLHLLREL---SHPMKIVVINNHG 110
BLAST of mRNA_M-pyrifera_M_contig8945.20729.1 vs. uniprot
Match: A0A1V0DD88_9BACT (2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A1V0DD88_9BACT) HSP 1 Score: 102 bits (255), Expect = 3.610e-23 Identity = 63/115 (54.78%), Postives = 75/115 (65.22%), Query Frame = 1 Query: 1 LTEPFVSWCVSRDIDPAAGLFLSASMPCRDVESAKGVFSGARGGGRLSDVASNRGASGIDGVVSSAIGYAAGLGAPVTLLIGDMATLHDLGSLHALRGLDATSHPVTVVCVNNGG 345 L+EP V+ V+R + P GLFL++SMP RD + A GG VA+NRGASGIDG V+SA G+AAGL PVTLLIGD+A LHDL SL LR L PV VV +NN G Sbjct: 390 LSEPLVARLVTRHLPPEHGLFLASSMPVRDADMY------AVGGAAAVPVAANRGASGIDGTVASAAGFAAGLARPVTLLIGDLALLHDLNSLALLRRLPV---PVVVVAINNDG 495
BLAST of mRNA_M-pyrifera_M_contig8945.20729.1 vs. uniprot
Match: A0A1Q7ZRX4_9CYAN (TPP_enzyme_C domain-containing protein n=1 Tax=Cyanobacteria bacterium 13_1_40CM_2_61_4 TaxID=1805101 RepID=A0A1Q7ZRX4_9CYAN) HSP 1 Score: 99.0 bits (245), Expect = 3.990e-23 Identity = 61/115 (53.04%), Postives = 76/115 (66.09%), Query Frame = 1 Query: 1 LTEPFVSWCVSRDIDPAAGLFLSASMPCRDVESAKGVFSGARGGGRLSDVASNRGASGIDGVVSSAIGYAAGLGAPVTLLIGDMATLHDLGSLHALRGLDATSHPVTVVCVNNGG 345 L+EP V+ VS++I GLFL +SMP RD+ + A GG + VA+NRGASGIDG V+SA G+A GL VTLLIGD+A LHDL SL R LDA P+T+V +NN G Sbjct: 51 LSEPLVARLVSQEIGAERGLFLGSSMPVRDMNTF------AAPGGPSTRVAANRGASGIDGTVASATGFAQGLNHRVTLLIGDLALLHDLNSLSLTRSLDA---PMTIVVLNNNG 156
BLAST of mRNA_M-pyrifera_M_contig8945.20729.1 vs. uniprot
Match: UPI000E5B8BEE (2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase n=1 Tax=Rubrobacter indicoceani TaxID=2051957 RepID=UPI000E5B8BEE) HSP 1 Score: 102 bits (253), Expect = 6.730e-23 Identity = 61/115 (53.04%), Postives = 76/115 (66.09%), Query Frame = 1 Query: 1 LTEPFVSWCVSRDIDPAAGLFLSASMPCRDVESAKGVFSGARGGGRLSDVASNRGASGIDGVVSSAIGYAAGLGAPVTLLIGDMATLHDLGSLHALRGLDATSHPVTVVCVNNGG 345 L EPFV+ V RD+ +GL +++SMP RDV+S ++G R VA+NRGASGIDG V++A G+A G G VT+LIGD+A LHDL SL LRGL PVT V VNN G Sbjct: 389 LAEPFVARAVMRDMPSGSGLVVASSMPVRDVDS----YAGLRADAEYIPVAANRGASGIDGTVATAAGFALGSGRAVTVLIGDLALLHDLNSLAMLRGL-----PVTFVVVNNDG 494
BLAST of mRNA_M-pyrifera_M_contig8945.20729.1 vs. uniprot
Match: A0A523YYJ1_9BACT (2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (Fragment) n=1 Tax=candidate division Zixibacteria bacterium TaxID=2053527 RepID=A0A523YYJ1_9BACT) HSP 1 Score: 99.0 bits (245), Expect = 7.210e-22 Identity = 57/115 (49.57%), Postives = 77/115 (66.96%), Query Frame = 1 Query: 1 LTEPFVSWCVSRDIDPAAGLFLSASMPCRDVESAKGVFSGARGGGRLSDVASNRGASGIDGVVSSAIGYAAGLGAPVTLLIGDMATLHDLGSLHALRGLDATSHPVTVVCVNNGG 345 L+EP V+ +S++I P +GLF+S SMP RD++ G + VA NRGASGIDG+++SA G+A GL PVTLLIGD+A LHD+ SL L+ L A HP+ +V +NN G Sbjct: 319 LSEPAVARLISQNIRPDSGLFVSNSMPIRDMDMYADPH------GPVVTVACNRGASGIDGIIASATGFACGLNKPVTLLIGDLAFLHDVNSLALLKSL-AHPHPLVIVVINNDG 426 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8945.20729.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8945.20729.1 >prot_M-pyrifera_M_contig8945.20729.1 ID=prot_M-pyrifera_M_contig8945.20729.1|Name=mRNA_M-pyrifera_M_contig8945.20729.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=115bp LTEPFVSWCVSRDIDPAAGLFLSASMPCRDVESAKGVFSGARGGGRLSDVback to top mRNA from alignment at M-pyrifera_M_contig8945:491..1036- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8945.20729.1 ID=mRNA_M-pyrifera_M_contig8945.20729.1|Name=mRNA_M-pyrifera_M_contig8945.20729.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=546bp|location=Sequence derived from alignment at M-pyrifera_M_contig8945:491..1036- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8945:491..1036- >mRNA_M-pyrifera_M_contig8945.20729.1 ID=mRNA_M-pyrifera_M_contig8945.20729.1|Name=mRNA_M-pyrifera_M_contig8945.20729.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=690bp|location=Sequence derived from alignment at M-pyrifera_M_contig8945:491..1036- (Macrocystis pyrifera P11B4 male)back to top |