mRNA_M-pyrifera_M_contig89400.20720.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig89400.20720.1 vs. uniprot
Match: A0A6I6AJ19_9PLAN (Carbohydrate porin n=6 Tax=Gimesia TaxID=1649453 RepID=A0A6I6AJ19_9PLAN) HSP 1 Score: 408 bits (1048), Expect = 4.130e-140 Identity = 193/198 (97.47%), Postives = 197/198 (99.49%), Query Frame = 1 Query: 1 TRTSGFDELFAHGAAIVPELRLPTNLFGKPGHFLFGASYSTRSFASLEQDPLFVLPTVPISRETESWSFYWNFDQYLVVDPDNPQRGWGLFGRAGIADKQTNPIEWFLSLGVGGSSPIASREADTFGIGWYYSATSDRLTPFIDKVLGGVGDGYGVELFYNVEVTKWFHLTTDMQVIRPARQTVDTALLVGLRAVIDL 594 TRTSGFDELFAHGAAI+PELRLPTNLFGKPGHFLFGASYSTRSFASLEQDPLFVLPTVPI RE+ESWSFYWNFDQYLV+DPDNPQRGWGLFGRAGIADKQTNPIEWFLSLG+GGSSPIASREADTFGIGWYYSATSDRLTPFIDKVLGGVGDGYGVELFYNVEVTKWFHLTTDMQVIRPARQTVDTALLVGLRAVIDL Sbjct: 272 TRTSGFDELFAHGAAIIPELRLPTNLFGKPGHFLFGASYSTRSFASLEQDPLFVLPTVPIDRESESWSFYWNFDQYLVIDPDNPQRGWGLFGRAGIADKQTNPIEWFLSLGIGGSSPIASREADTFGIGWYYSATSDRLTPFIDKVLGGVGDGYGVELFYNVEVTKWFHLTTDMQVIRPARQTVDTALLVGLRAVIDL 469
BLAST of mRNA_M-pyrifera_M_contig89400.20720.1 vs. uniprot
Match: A0A518AA94_9PLAN (Carbohydrate-selective porin, OprB family n=6 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518AA94_9PLAN) HSP 1 Score: 387 bits (993), Expect = 9.110e-132 Identity = 180/198 (90.91%), Postives = 191/198 (96.46%), Query Frame = 1 Query: 1 TRTSGFDELFAHGAAIVPELRLPTNLFGKPGHFLFGASYSTRSFASLEQDPLFVLPTVPISRETESWSFYWNFDQYLVVDPDNPQRGWGLFGRAGIADKQTNPIEWFLSLGVGGSSPIASREADTFGIGWYYSATSDRLTPFIDKVLGGVGDGYGVELFYNVEVTKWFHLTTDMQVIRPARQTVDTALLVGLRAVIDL 594 TRTSGF+ELFAHGAAIVPELRLPTNLFGKPGHFLFGASYS+RSFASLEQDP +LP +PISRETESWSFYWNFDQYL VDPDNP+RGWGLFGRAGIADKQTNPIEWFLSLG+GG+SPI+SREADTFGIGWYYSATSDRL PFID++LGGVGDGYGVE+FYNVEV KWFHLT DMQVIRPARQTVDTALLVGLRAVIDL Sbjct: 272 TRTSGFNELFAHGAAIVPELRLPTNLFGKPGHFLFGASYSSRSFASLEQDPFILLPDIPISRETESWSFYWNFDQYLFVDPDNPERGWGLFGRAGIADKQTNPIEWFLSLGIGGNSPISSREADTFGIGWYYSATSDRLAPFIDQILGGVGDGYGVEMFYNVEVNKWFHLTADMQVIRPARQTVDTALLVGLRAVIDL 469
BLAST of mRNA_M-pyrifera_M_contig89400.20720.1 vs. uniprot
Match: A0A2E2C2L4_9PLAN (Carbohydrate porin n=4 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C2L4_9PLAN) HSP 1 Score: 355 bits (910), Expect = 2.220e-119 Identity = 160/198 (80.81%), Postives = 183/198 (92.42%), Query Frame = 1 Query: 1 TRTSGFDELFAHGAAIVPELRLPTNLFGKPGHFLFGASYSTRSFASLEQDPLFVLPTVPISRETESWSFYWNFDQYLVVDPDNPQRGWGLFGRAGIADKQTNPIEWFLSLGVGGSSPIASREADTFGIGWYYSATSDRLTPFIDKVLGGVGDGYGVELFYNVEVTKWFHLTTDMQVIRPARQTVDTALLVGLRAVIDL 594 +RTSGF+ELFA+GA+++PELRLPTNLFG+PGHFLFGAS+S+R +A+LEQDP VLP +PI R+T+SWS YWNFDQYL VDP +P RGWG+FGRAGIAD TNPIEWFLS GVGG+SPI+SREADTFG+GWYYSATSDRL PFI+ +LGGVGDGYGVELFYN+EVTKWFHLT DMQV+RPARQTVDTALLVGLRAVIDL Sbjct: 258 SRTSGFEELFANGASVIPELRLPTNLFGRPGHFLFGASWSSRDYAALEQDPFIVLPDIPIDRKTDSWSLYWNFDQYLFVDPCDPSRGWGVFGRAGIADADTNPIEWFLSFGVGGNSPISSREADTFGVGWYYSATSDRLAPFINNILGGVGDGYGVELFYNIEVTKWFHLTADMQVLRPARQTVDTALLVGLRAVIDL 455
BLAST of mRNA_M-pyrifera_M_contig89400.20720.1 vs. uniprot
Match: A0A517VAK9_9PLAN (Carbohydrate-selective porin, OprB family n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VAK9_9PLAN) HSP 1 Score: 352 bits (902), Expect = 4.230e-118 Identity = 158/198 (79.80%), Postives = 184/198 (92.93%), Query Frame = 1 Query: 1 TRTSGFDELFAHGAAIVPELRLPTNLFGKPGHFLFGASYSTRSFASLEQDPLFVLPTVPISRETESWSFYWNFDQYLVVDPDNPQRGWGLFGRAGIADKQTNPIEWFLSLGVGGSSPIASREADTFGIGWYYSATSDRLTPFIDKVLGGVGDGYGVELFYNVEVTKWFHLTTDMQVIRPARQTVDTALLVGLRAVIDL 594 +RTSGFDELFA+GA+++PELRLPTNLFG+PGHFLFGAS+S+R +A+LEQDP VLP +PISR+T+SWS YWNFDQYL VDP + RGWG+FGRAGIAD +TNPIEWFLS GVGG+SPI+SREADTFG+GWYYSATSDRL+PFI+ +LGGVGDG+GVELFYN+EVTKWFHLT DMQV+RP RQT+DTALLVGLRAVIDL Sbjct: 263 SRTSGFDELFANGASVIPELRLPTNLFGRPGHFLFGASWSSRDYAALEQDPFIVLPDIPISRKTDSWSLYWNFDQYLFVDPCDATRGWGIFGRAGIADAETNPIEWFLSFGVGGNSPISSREADTFGVGWYYSATSDRLSPFINTILGGVGDGHGVELFYNIEVTKWFHLTADMQVLRPVRQTIDTALLVGLRAVIDL 460
BLAST of mRNA_M-pyrifera_M_contig89400.20720.1 vs. uniprot
Match: A0A350K3H6_9PLAN (Carbohydrate porin n=5 Tax=Planctomycetaceae TaxID=126 RepID=A0A350K3H6_9PLAN) HSP 1 Score: 349 bits (895), Expect = 4.850e-117 Identity = 158/196 (80.61%), Postives = 180/196 (91.84%), Query Frame = 1 Query: 7 TSGFDELFAHGAAIVPELRLPTNLFGKPGHFLFGASYSTRSFASLEQDPLFVLPTVPISRETESWSFYWNFDQYLVVDPDNPQRGWGLFGRAGIADKQTNPIEWFLSLGVGGSSPIASREADTFGIGWYYSATSDRLTPFIDKVLGGVGDGYGVELFYNVEVTKWFHLTTDMQVIRPARQTVDTALLVGLRAVIDL 594 TSGF ELFA+GA+++PELRLPTNLFG+PGHFLFGAS+S+R +A+LEQDP VLP +PISR+T+SWS YWNFDQYL VDPD+ +RGWGLFGRAGIAD +TNPIEWFLS GVGG+SPI+SREADTFG+GWYYSATSDRL PFI+ VLGGVGDGYGVE+FYN+EV KWFHLT DMQVIRPA TVDTAL+VGLRAVIDL Sbjct: 265 TSGFKELFANGASVIPELRLPTNLFGRPGHFLFGASWSSRDYAALEQDPFIVLPDIPISRKTDSWSLYWNFDQYLFVDPDDAERGWGLFGRAGIADAETNPIEWFLSFGVGGNSPISSREADTFGVGWYYSATSDRLAPFINTVLGGVGDGYGVEMFYNIEVNKWFHLTADMQVIRPAHDTVDTALVVGLRAVIDL 460
BLAST of mRNA_M-pyrifera_M_contig89400.20720.1 vs. uniprot
Match: UPI001CA978AB (carbohydrate porin n=1 Tax=Gimesia maris TaxID=122 RepID=UPI001CA978AB) HSP 1 Score: 344 bits (882), Expect = 1.880e-116 Identity = 155/196 (79.08%), Postives = 180/196 (91.84%), Query Frame = 1 Query: 7 TSGFDELFAHGAAIVPELRLPTNLFGKPGHFLFGASYSTRSFASLEQDPLFVLPTVPISRETESWSFYWNFDQYLVVDPDNPQRGWGLFGRAGIADKQTNPIEWFLSLGVGGSSPIASREADTFGIGWYYSATSDRLTPFIDKVLGGVGDGYGVELFYNVEVTKWFHLTTDMQVIRPARQTVDTALLVGLRAVIDL 594 TSGF ELFA+GA+++PELRLPTNLFG+PGHFLFGAS+S+R +A+LEQDP VLP +PISR+T+SWS YWNFDQYL VDP + RGWG+FGRAGIAD +TNPIEWFLS GVGG+SPI+SREADTFG+GWYYSATSDRL+PFI+ +LGGVGDGYGVE+FYN+EV KWFHLT DMQVIRPA +TVDTAL+VGLRAVIDL Sbjct: 166 TSGFKELFANGASVIPELRLPTNLFGRPGHFLFGASWSSRDYAALEQDPFIVLPDIPISRKTDSWSLYWNFDQYLFVDPCDATRGWGVFGRAGIADAETNPIEWFLSFGVGGNSPISSREADTFGVGWYYSATSDRLSPFINTILGGVGDGYGVEMFYNIEVNKWFHLTADMQVIRPAHETVDTALVVGLRAVIDL 361
BLAST of mRNA_M-pyrifera_M_contig89400.20720.1 vs. uniprot
Match: A0A518IER4_9PLAN (Carbohydrate-selective porin, OprB family n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IER4_9PLAN) HSP 1 Score: 347 bits (890), Expect = 2.610e-116 Identity = 154/198 (77.78%), Postives = 182/198 (91.92%), Query Frame = 1 Query: 1 TRTSGFDELFAHGAAIVPELRLPTNLFGKPGHFLFGASYSTRSFASLEQDPLFVLPTVPISRETESWSFYWNFDQYLVVDPDNPQRGWGLFGRAGIADKQTNPIEWFLSLGVGGSSPIASREADTFGIGWYYSATSDRLTPFIDKVLGGVGDGYGVELFYNVEVTKWFHLTTDMQVIRPARQTVDTALLVGLRAVIDL 594 +RTSGFDELFA+GAA++PELRLPTNLFG+PGHFLFGAS+S+R +ASLEQDP LP +PI+RET+SWS YWNFDQYL VDP +P RGWG+FGRAGIAD +TNPI+WFLSLG+GG+SPI+SR++DTFG+GWYYSATSDRL PFI+ LGGVGDGYGVE+FYN E+T+WFHLT DMQV+RPARQT DTAL+VGLRAVI+L Sbjct: 261 SRTSGFDELFANGAAVIPELRLPTNLFGRPGHFLFGASWSSRDYASLEQDPFITLPDIPIARETDSWSLYWNFDQYLFVDPCDPTRGWGVFGRAGIADDRTNPIDWFLSLGIGGNSPISSRKSDTFGLGWYYSATSDRLAPFIETALGGVGDGYGVEIFYNAEITRWFHLTADMQVLRPARQTADTALVVGLRAVIEL 458
BLAST of mRNA_M-pyrifera_M_contig89400.20720.1 vs. uniprot
Match: UPI0012983395 (carbohydrate porin n=1 Tax=Roseimaritima sediminicola TaxID=2662066 RepID=UPI0012983395) HSP 1 Score: 268 bits (686), Expect = 1.200e-85 Identity = 119/193 (61.66%), Postives = 147/193 (76.17%), Query Frame = 1 Query: 4 RTSGFDELFAHGAAIVPELRLPTNLFGKPGHFLFGASYSTRSFASLEQDPLFVLPTVPISRETESWSFYWNFDQYLVVDPDNPQRGWGLFGRAGIADKQTNPIEWFLSLGVGGSSPIASREADTFGIGWYYSATSDRLTPFIDKVLGGVGDGYGVELFYNVEVTKWFHLTTDMQVIRPARQTVDTALLVGLRA 582 RTSG EL++ G + ELRLPT LFG PGH L G ++S+R ASL QDP VLP VPI+R+++SW+ YWNFDQYLV D NPQ+GWG+FGRAG+AD QTNP+ WFLS GVGG+S + R++DTFG+GWYY+ TSD L P + +G VGDG GVE+FYNV VT W H+T D+Q I PAR+ VDTA + GLRA Sbjct: 250 RTSGISELYSEGVTLAAELRLPTQLFGMPGHQLVGGTWSSRDVASLGQDPRIVLPNVPIARQSDSWALYWNFDQYLVTDACNPQQGWGVFGRAGLADDQTNPLSWFLSFGVGGNSQLRGRQSDTFGVGWYYAGTSDELGPLLQAAVGPVGDGQGVEMFYNVAVTPWLHITPDLQFIVPARENVDTATVAGLRA 442
BLAST of mRNA_M-pyrifera_M_contig89400.20720.1 vs. uniprot
Match: A0A518CSV2_9PLAN (Carbohydrate-selective porin, OprB family n=2 Tax=Polystyrenella longa TaxID=2528007 RepID=A0A518CSV2_9PLAN) HSP 1 Score: 265 bits (676), Expect = 5.680e-84 Identity = 112/194 (57.73%), Postives = 154/194 (79.38%), Query Frame = 1 Query: 1 TRTSGFDELFAHGAAIVPELRLPTNLFGKPGHFLFGASYSTRSFASLEQDPLFVLPTVPISRETESWSFYWNFDQYLVVDPDNPQRGWGLFGRAGIADKQTNPIEWFLSLGVGGSSPIASREADTFGIGWYYSATSDRLTPFIDKVLGGVGDGYGVELFYNVEVTKWFHLTTDMQVIRPARQTVDTALLVGLRA 582 TRTSGFDELF G A++PELRLPTN FG PGH LFGA++S+R++ +L+QDP +LP VP+++ +++WS Y+NFDQYL VDP + ++GWG+FGRAGIA+ TNP+EWFLS G+GG+S I R+ DTFG+G+YY+ TSD + PF+ +GG+ DG GVE++YN+ V + +T D QVI PAR +DTA+L+G+RA Sbjct: 263 TRTSGFDELFEEGVALIPELRLPTNFFGMPGHQLFGATWSSRTYTALDQDPRIILPNVPVAKSSDTWSLYYNFDQYLYVDPCDSKKGWGVFGRAGIAEADTNPLEWFLSFGIGGNSVIHGRDEDTFGVGYYYAGTSDEIAPFVQNAIGGINDGQGVEMYYNIAVNRSLTITPDAQVIIPARDQIDTAVLLGVRA 456
BLAST of mRNA_M-pyrifera_M_contig89400.20720.1 vs. uniprot
Match: A0A3L7RI29_9BACT (Carbohydrate porin n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7RI29_9BACT) HSP 1 Score: 262 bits (669), Expect = 1.020e-82 Identity = 115/195 (58.97%), Postives = 151/195 (77.44%), Query Frame = 1 Query: 4 RTSGFDELFAHGAAIVPELRLPTNLFGKPGHFLFGASYSTRSFASLEQDPLFVLPTVPISRETESWSFYWNFDQYLVVDPDNPQRGWGLFGRAGIADKQTNPIEWFLSLGVGGSSPIASREADTFGIGWYYSATSDRLTPFIDKVLGGVGDGYGVELFYNVEVTKWFHLTTDMQVIRPARQTVDTALLVGLRAVI 588 +TSGFDELF GA + PELR+PT FG PGH LFG ++S+R++ SL+QDP +LP +PI+R ++SWS Y+NFDQ+L VD +P +GWGLFGRAG+AD+ TNPI WFLS GVGG+S I R DTFG G+YY+ TS L P + LGGVGDG+G EL+YN+ VT+WF LT D Q I PAR++VD+++L+G+R V+ Sbjct: 281 KTSGFDELFNDGATLAPELRIPTEFFGLPGHQLFGGTWSSRNYISLDQDPRIILPNIPIARSSDSWSMYYNFDQHLFVDSSDPTKGWGLFGRAGLADQATNPIGWFLSAGVGGNSMIPGRSNDTFGAGYYYAGTSSELEPLLALALGGVGDGHGTELYYNIAVTEWFRLTADAQFITPARESVDSSVLLGMRGVV 475 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89400.20720.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig89400.20720.1 >prot_M-pyrifera_M_contig89400.20720.1 ID=prot_M-pyrifera_M_contig89400.20720.1|Name=mRNA_M-pyrifera_M_contig89400.20720.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=199bp TRTSGFDELFAHGAAIVPELRLPTNLFGKPGHFLFGASYSTRSFASLEQDback to top mRNA from alignment at M-pyrifera_M_contig89400:208..804- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig89400.20720.1 ID=mRNA_M-pyrifera_M_contig89400.20720.1|Name=mRNA_M-pyrifera_M_contig89400.20720.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=597bp|location=Sequence derived from alignment at M-pyrifera_M_contig89400:208..804- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig89400:208..804- >mRNA_M-pyrifera_M_contig89400.20720.1 ID=mRNA_M-pyrifera_M_contig89400.20720.1|Name=mRNA_M-pyrifera_M_contig89400.20720.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1194bp|location=Sequence derived from alignment at M-pyrifera_M_contig89400:208..804- (Macrocystis pyrifera P11B4 male)back to top |