mRNA_M-pyrifera_M_contig89394.20716.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig89394.20716.1 vs. uniprot
Match: A0A7S4ISZ1_9EUKA (Splicing factor YJU2 n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4ISZ1_9EUKA) HSP 1 Score: 216 bits (550), Expect = 2.780e-67 Identity = 109/213 (51.17%), Postives = 151/213 (70.89%), Query Frame = 1 Query: 1 MGERKVINKYYAPDFDPSKLPKKKKSKSTTIKSRVMLPMTICCSTCHEFIYKGKKFNARKETVKGEDYLGLKIFRFYIKCTKCATSITFKTDPKNSDYTCEIGATRNYEP--WNDKDQKREEXXXXXXXXXDDAMAKLESKTEALKSQMDELDRLDELRSLNKRQAHFDLEQVLAVRQKAYEEQMRALELQDEEELNEVTFHNSSTFIRRLED 633 MGERKV+NKYY DFDPSKLPKK + K+ K RVMLPMT+CC TCHE+IYKGKKFN+RKETV+GE+YLG+KI+RFYIKCTKC++ +TFKTDP++SDY E+G TRN+EP W +++ +E DA+AKLE +T+ K++M+++++LDELR L+ R +++V R+ EE+ EL + FHNS ++++ D Sbjct: 1 MGERKVLNKYYPADFDPSKLPKKARPKNNQQKVRVMLPMTVCCDTCHEYIYKGKKFNSRKETVEGEEYLGIKIYRFYIKCTKCSSELTFKTDPEHSDYNAELGCTRNFEPYSWRSQEEAEKEKSKKKDEIESDAIAKLEQRTKQRKNEMEDIEKLDELRMLSGRNDSVPVDRVFEARR--LEEEAXXXXXX---ELASIVFHNSKDRVKKISD 208
BLAST of mRNA_M-pyrifera_M_contig89394.20716.1 vs. uniprot
Match: A0A7C9CQA1_OPUST (Splicing factor YJU2 n=2 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9CQA1_OPUST) HSP 1 Score: 213 bits (542), Expect = 8.120e-66 Identity = 113/216 (52.31%), Postives = 149/216 (68.98%), Query Frame = 1 Query: 1 MGERKVINKYYAPDFDPSKLPKKKKSKSTTIKSRVMLPMTICCSTCHEFIYKGKKFNARKETVKGEDYLGLKIFRFYIKCTKCATSITFKTDPKNSDYTCEIGATRNYEPWNDKDQKRE-EXXXXXXXXXDDAMAKLESKTEALKSQMDELDRLDELRSLNKRQAHFDLEQVLAVRQKAYEEQMRALELQDEEELNEVTFHNSSTFIRRLEDDPSD 645 MGERKV+NKYY PDFDP+K+P++++ K+ IK R+MLPM+I CSTC +IYKG KFN+RKE V GE YLG++IFRFY KCTKC+ + KTDP+NSDY E GATRN+EPW DKD++ E E DAM LE++T K +MD L LDE+RS+ RQA LE++L Q+ EE+ R LE +DE + + FH +RR++D+ D Sbjct: 1 MGERKVLNKYYPPDFDPAKIPRRRQPKNQQIKVRMMLPMSIRCSTCGNYIYKGTKFNSRKEDVIGETYLGIQIFRFYFKCTKCSAELAIKTDPQNSDYVVEAGATRNFEPWRDKDEELEQEKRKRDAEELGDAMKSLENRTLDSKREMDILAALDEMRSMKSRQATVSLEEMLEAIQRTGEEKERKLEEEDEALIKSI-FHGPKDTVRRIDDEEWD 215
BLAST of mRNA_M-pyrifera_M_contig89394.20716.1 vs. uniprot
Match: A9TR65_PHYPA (Splicing factor YJU2 n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TR65_PHYPA) HSP 1 Score: 211 bits (537), Expect = 3.850e-65 Identity = 109/219 (49.77%), Postives = 150/219 (68.49%), Query Frame = 1 Query: 1 MGERKVINKYYAPDFDPSKLPKKKKSKSTTIKSRVMLPMTICCSTCHEFIYKGKKFNARKETVKGEDYLGLKIFRFYIKCTKCATSITFKTDPKNSDYTCEIGATRNYEPWNDKDQKREEXXXXXXXXX-DDAMAKLESKTEALKSQMDELDRLDELRSLNKRQAHFDLEQVLAVRQKAYEEQMRALELQDEEELNEVTFHNSSTFIRRLEDDPSDAGG 654 MGERKV+NKYY PDFDP+K+P++K+ K+ IK R+MLPM+I C+TC +IYKG KFN+RKE V+GE YLG++IFRFY KC+KC+ +T KTDP+NSDY E GA+RNYEPW D+ +E DAM LE++T K +MD + LDE++S+ R A +E ++A ++ E+ + LE QDE + V F NSS F+RR++DD + G Sbjct: 1 MGERKVLNKYYPPDFDPAKIPRRKQPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDVEGETYLGIQIFRFYFKCSKCSAELTMKTDPQNSDYIMETGASRNYEPWRATDEATDEAVKKREAEELGDAMKALENRTLDSKQEMDIMAALDEMKSMRSRHATVAVEDMMAALRRTAAEKDKELEEQDEAVIKSVIFQNSSKFVRRIDDDDLEDDG 219
BLAST of mRNA_M-pyrifera_M_contig89394.20716.1 vs. uniprot
Match: A0A6B2LD55_9EUKA (Splicing factor YJU2 n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LD55_9EUKA) HSP 1 Score: 211 bits (537), Expect = 8.480e-65 Identity = 116/224 (51.79%), Postives = 155/224 (69.20%), Query Frame = 1 Query: 1 MGERKVINKYYAPDFDPSKLPKKKKSKSTTIKSRVMLPMTICCSTCHEFIYKGKKFNARKETVKGEDYLGLKIFRFYIKCTKCATSITFKTDPKNSDYTCEIGATRNYEPWNDKDQKREEXXXXXXXXXD-DAMAKLESKTEALKSQMDELDRLDELRSLNKRQAHFDLEQVLAVRQKAYEEQMRALELQDEEELNEVTF--HNSSTFIRRLEDDPSDAGGAVK 663 MGERKV+NKYY PDFDP+ +P+ ++ K+ K R+M+PM+I C TC EFIYKGKKFNARKETV+GE+YLG+KIFRFY+KCT+C++ IT KTDPKNSDYTCE+GATRN+E W + ++ E+ +AM LE+KT K +MD LD LDE+RSLN + + D Q+L QK EE+ ++ DEEE+N + +S I+RL D+P + K Sbjct: 1 MGERKVLNKYYPPDFDPTLIPRARRPKNEQYKVRMMVPMSIRCLTCGEFIYKGKKFNARKETVQGEEYLGIKIFRFYVKCTRCSSEITIKTDPKNSDYTCEMGATRNFEGWKEGEKMMEQFRKQREEEEQGNAMKALENKTLDNKMEMDILDGLDEIRSLNAKASKVDPMQILEHIQKQEEEEEPSV---DEEEMNTLRLLEQSSDLPIKRLPDEPDEPSRTPK 221
BLAST of mRNA_M-pyrifera_M_contig89394.20716.1 vs. uniprot
Match: A0A6P8EDY0_PUNGR (Splicing factor YJU2 n=4 Tax=Punica granatum TaxID=22663 RepID=A0A6P8EDY0_PUNGR) HSP 1 Score: 214 bits (544), Expect = 8.530e-65 Identity = 108/213 (50.70%), Postives = 149/213 (69.95%), Query Frame = 1 Query: 1 MGERKVINKYYAPDFDPSKLPKKKKSKSTTIKSRVMLPMTICCSTCHEFIYKGKKFNARKETVKGEDYLGLKIFRFYIKCTKCATSITFKTDPKNSDYTCEIGATRNYEPWNDKDQKREEXXXXXXXXX-DDAMAKLESKTEALKSQMDELDRLDELRSLNKRQAHFDLEQVLAVRQKAYEEQMRALELQDEEELNEVTFHNSSTFIRRLEDD 636 MGERKV+NKYY PDFDPSKLP+ ++ K+ IK R+MLPM+I C+TC +IYKG KFN+RKE V+GE YLG++IFRFY KCT+C+ +T KTDPKNSDY E GATRN+EPW +D++ + DAM LE++T K +MD L LDE++S+ R A L+++LA Q++ ++ + LE +DE + + FH S F+RR+E+D Sbjct: 1 MGERKVLNKYYPPDFDPSKLPRVRRDKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDVEGEKYLGIQIFRFYFKCTRCSAELTMKTDPKNSDYVVESGATRNFEPWRAEDEEEDNVKRKREAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSLDEMLAALQRSSADKEKKLEDEDEALIKSIVFHGSKDFVRRIEED 213
BLAST of mRNA_M-pyrifera_M_contig89394.20716.1 vs. uniprot
Match: UPI0012F4FE67 (LOW QUALITY PROTEIN: splicing factor YJU2-like n=3 Tax=Benincaseae TaxID=1003877 RepID=UPI0012F4FE67) HSP 1 Score: 212 bits (539), Expect = 1.290e-64 Identity = 108/222 (48.65%), Postives = 151/222 (68.02%), Query Frame = 1 Query: 1 MGERKVINKYYAPDFDPSKLPKKKKSKSTTIKSRVMLPMTICCSTCHEFIYKGKKFNARKETVKGEDYLGLKIFRFYIKCTKCATSITFKTDPKNSDYTCEIGATRNYEPWNDKDQKRE-EXXXXXXXXXDDAMAKLESKTEALKSQMDELDRLDELRSLNKRQAHFDLEQVLAVRQKAYEEQMRALELQDEEELNEVTFHNSSTFIRRLEDDPSDAGGAVK 663 MGERKV+NKYY PDFDPSKLP+ ++ K+ +K R+MLPM+I C+TC +IYKG KFN+RKE V GE YLG++IFRFY KCT+C+ + KTDP+NSDY E GATRN+EPW ++D+ E E DAM LE++T K +MD L LDE++S+ R A ++ +L Q+ E+ + LE +DE + + F+NS++++RR+ DD D G V+ Sbjct: 1 MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDVIGETYLGIQIFRFYFKCTRCSAELXIKTDPQNSDYVVESGATRNFEPWREEDEASEKEKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQRTAAEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSIVQ 222
BLAST of mRNA_M-pyrifera_M_contig89394.20716.1 vs. uniprot
Match: A0A0D9V0U0_9ORYZ (Splicing factor YJU2 n=15 Tax=Oryzeae TaxID=147380 RepID=A0A0D9V0U0_9ORYZ) HSP 1 Score: 212 bits (539), Expect = 1.330e-64 Identity = 110/220 (50.00%), Postives = 153/220 (69.55%), Query Frame = 1 Query: 1 MGERKVINKYYAPDFDPSKLPKKKKSKSTTIKSRVMLPMTICCSTCHEFIYKGKKFNARKETVKGEDYLGLKIFRFYIKCTKCATSITFKTDPKNSDYTCEIGATRNYEPWNDKDQKRE-EXXXXXXXXXDDAMAKLESKTEALKSQMDELDRLDELRSLNKRQAHFDLEQVLAVRQKAY----EEQMRALELQDEEELNEVTFHNSSTFIRRLEDDPSD 645 MGERKV+NKYY PDFDPSK+P++++ K+ IK R+MLPM+I C TC +IYKG KFN+RKE V+GE YLG++IFRFY KCTKC+ ITFKTDP+NSDYT E GA+RN+EPW ++D+ + E DAM LE++ K MD L L+E+RS+ R A ++Q+L + +++ E+ + L+ +DEE + +TF NS +I+R+EDD D Sbjct: 1 MGERKVLNKYYPPDFDPSKIPRRRQPKNQQIKVRMMLPMSIRCGTCGTYIYKGTKFNSRKEDVEGEKYLGIQIFRFYFKCTKCSAEITFKTDPQNSDYTVESGASRNFEPWREEDEVADKEKRKRDEEEMGDAMKALENRAMDSKQDMDILAALEEMRSMKSRHAGVTVDQMLEILKRSAHDKEEKTVAELDEEDEELIKSITFRNSKDYIKRIEDDEDD 220
BLAST of mRNA_M-pyrifera_M_contig89394.20716.1 vs. uniprot
Match: C6TJQ5_SOYBN (Splicing factor YJU2 n=2 Tax=Glycine subgen. Soja TaxID=1462606 RepID=C6TJQ5_SOYBN) HSP 1 Score: 209 bits (532), Expect = 1.560e-64 Identity = 107/213 (50.23%), Postives = 147/213 (69.01%), Query Frame = 1 Query: 1 MGERKVINKYYAPDFDPSKLPKKKKSKSTTIKSRVMLPMTICCSTCHEFIYKGKKFNARKETVKGEDYLGLKIFRFYIKCTKCATSITFKTDPKNSDYTCEIGATRNYEPWNDKDQKREEXXXXXXXXX-DDAMAKLESKTEALKSQMDELDRLDELRSLNKRQAHFDLEQVLAVRQKAYEEQMRALELQDEEELNEVTFHNSSTFIRRLEDD 636 MGERKV+NKYY PDFDPSKLP+ ++ K+ IK R+MLPM+I C+TC +IYKG KFN+RKE V GE YLG++IFRFY KCTKC+ +T KTDP+NSDY E GATRN+EPW +D++ ++ DAM LE++T K +MD L LDE++S+ R A ++++L Q+ ++ + LE +DE + V FHNS F+RR+ D+ Sbjct: 1 MGERKVLNKYYPPDFDPSKLPRARRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDVIGETYLGIQIFRFYFKCTKCSAEVTMKTDPQNSDYIVESGATRNFEPWRAEDEETDKMKEKREAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSVDEMLEALQRTAADKEKRLEEEDEALIKSVVFHNSDGFVRRIRDE 213
BLAST of mRNA_M-pyrifera_M_contig89394.20716.1 vs. uniprot
Match: A0A2K1IJA1_PHYPA (Splicing factor YJU2 n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IJA1_PHYPA) HSP 1 Score: 211 bits (537), Expect = 5.240e-64 Identity = 109/219 (49.77%), Postives = 150/219 (68.49%), Query Frame = 1 Query: 1 MGERKVINKYYAPDFDPSKLPKKKKSKSTTIKSRVMLPMTICCSTCHEFIYKGKKFNARKETVKGEDYLGLKIFRFYIKCTKCATSITFKTDPKNSDYTCEIGATRNYEPWNDKDQKREEXXXXXXXXX-DDAMAKLESKTEALKSQMDELDRLDELRSLNKRQAHFDLEQVLAVRQKAYEEQMRALELQDEEELNEVTFHNSSTFIRRLEDDPSDAGG 654 MGERKV+NKYY PDFDP+K+P++K+ K+ IK R+MLPM+I C+TC +IYKG KFN+RKE V+GE YLG++IFRFY KC+KC+ +T KTDP+NSDY E GA+RNYEPW D+ +E DAM LE++T K +MD + LDE++S+ R A +E ++A ++ E+ + LE QDE + V F NSS F+RR++DD + G Sbjct: 1 MGERKVLNKYYPPDFDPAKIPRRKQPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDVEGETYLGIQIFRFYFKCSKCSAELTMKTDPQNSDYIMETGASRNYEPWRATDEATDEAVKKREAEELGDAMKALENRTLDSKQEMDIMAALDEMKSMRSRHATVAVEDMMAALRRTAAEKDKELEEQDEAVIKSVIFQNSSKFVRRIDDDDLEDDG 219
BLAST of mRNA_M-pyrifera_M_contig89394.20716.1 vs. uniprot
Match: A0A6P6SFK2_COFAR (Splicing factor YJU2 n=3 Tax=Coffea TaxID=13442 RepID=A0A6P6SFK2_COFAR) HSP 1 Score: 210 bits (535), Expect = 6.140e-64 Identity = 109/213 (51.17%), Postives = 151/213 (70.89%), Query Frame = 1 Query: 1 MGERKVINKYYAPDFDPSKLPKKKKSKSTTIKSRVMLPMTICCSTCHEFIYKGKKFNARKETVKGEDYLGLKIFRFYIKCTKCATSITFKTDPKNSDYTCEIGATRNYEPWNDKDQKRE-EXXXXXXXXXDDAMAKLESKTEALKSQMDELDRLDELRSLNKRQAHFDLEQVLAVRQKAYEEQMRALELQDEEELNEVTFHNSSTFIRRLEDD 636 MGERKV+NKYY PDFDP+K+P++++ K+ +K R+MLPM+I C+TC +IYKG KFN+RKE V GE+YLG++IFRFY KCTKC+ IT+KTDPKNSDY E GATRN+EPW +D++ E E DAM LE++T K +MD L LDE++S+ RQA ++ +L V Q+A EE+ R L +DE + + +S +++RR+ DD Sbjct: 1 MGERKVLNKYYPPDFDPAKIPRRRQPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDVAGENYLGIQIFRFYFKCTKCSAEITYKTDPKNSDYVVESGATRNFEPWRAEDEQVESEKRKRDSEEMGDAMKSLENRTLDSKREMDILAALDEVKSMKSRQASVSVDAMLEVLQRANEEKERKLFEEDEALIRSIFKGSSESYVRRINDD 213 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89394.20716.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig89394.20716.1 >prot_M-pyrifera_M_contig89394.20716.1 ID=prot_M-pyrifera_M_contig89394.20716.1|Name=mRNA_M-pyrifera_M_contig89394.20716.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=221bp MGERKVINKYYAPDFDPSKLPKKKKSKSTTIKSRVMLPMTICCSTCHEFIback to top mRNA from alignment at M-pyrifera_M_contig89394:98..760- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig89394.20716.1 ID=mRNA_M-pyrifera_M_contig89394.20716.1|Name=mRNA_M-pyrifera_M_contig89394.20716.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=663bp|location=Sequence derived from alignment at M-pyrifera_M_contig89394:98..760- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig89394:98..760- >mRNA_M-pyrifera_M_contig89394.20716.1 ID=mRNA_M-pyrifera_M_contig89394.20716.1|Name=mRNA_M-pyrifera_M_contig89394.20716.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1326bp|location=Sequence derived from alignment at M-pyrifera_M_contig89394:98..760- (Macrocystis pyrifera P11B4 male)back to top |