mRNA_M-pyrifera_M_contig89346.20710.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig89346.20710.1
Unique NamemRNA_M-pyrifera_M_contig89346.20710.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig89346.20710.1 vs. uniprot
Match: A0A358A2H0_9ACTN (Peptide chain release factor N(5)-glutamine methyltransferase n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A358A2H0_9ACTN)

HSP 1 Score: 319 bits (817), Expect = 6.240e-106
Identity = 169/258 (65.50%), Postives = 197/258 (76.36%), Query Frame = 1
Query:    1 IVEEVTGAAPGRLHDVLVDLATERGVARFDSMVERRLAGEPLQYVLGRWGFRTLDLMVDPRVLIPRPETEVVAGLAIDVLRGRSAIADRDLLVADLGTGSGAIALSIAAECAATRVMATDASPDALAVARANLAGIGRCATRVSLHEGSWFDALPGAVQGSLDVVISNPPYVADGDHLPDVVDAWEPSTALRAGPDGLDDLAVIVADAPRWLAAGGTLVLEMAPDQTDTVATWTRDAGLDPTVHLDLAGRARAVVAHK 774
            IVE +TG  P   H  L + AT RGVA FD +V RR  GEPLQYV+GRWGFR LDLMVD RVLIPRPETEVVAGLAI+ +  RS  A R+++VADLGTGSGA+  +IA ECAA RV+ATD SPDALAVARANLAG+GR A RVSLHEGSWFDALP +V+G++DV++SNPPY+ D + LP VV  WEP  ALRAGP G +DL VI   A  W+A GG +VLEMAPDQT  +A   R+AG   ++H DLAGR RAVVA K
Sbjct:   74 IVEGLTGIEPSEFHSSLDNAATVRGVASFDRLVARREGGEPLQYVVGRWGFRHLDLMVDRRVLIPRPETEVVAGLAIEEVVARSG-AGREVVVADLGTGSGALGFAIATECAAARVLATDRSPDALAVARANLAGLGRAAGRVSLHEGSWFDALPMSVRGAIDVLVSNPPYIGDDEELPAVVGEWEPLEALRAGPAGDEDLQVIFHGADEWVAPGGAVVLEMAPDQTAGIADRFREAGWQASIHGDLAGRDRAVVARK 330          
BLAST of mRNA_M-pyrifera_M_contig89346.20710.1 vs. uniprot
Match: A0A3M2G4B8_ACTSX (Release factor glutamine methyltransferase n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2G4B8_ACTSX)

HSP 1 Score: 313 bits (802), Expect = 4.640e-104
Identity = 167/258 (64.73%), Postives = 191/258 (74.03%), Query Frame = 1
Query:    1 IVEEVTGAAPGRLHDVLVDLATERGVARFDSMVERRLAGEPLQYVLGRWGFRTLDLMVDPRVLIPRPETEVVAGLAIDVLRGRSAIADRDLLVADLGTGSGAIALSIAAECAATRVMATDASPDALAVARANLAGIGRCATRVSLHEGSWFDALPGAVQGSLDVVISNPPYVADGDHLPDVVDAWEPSTALRAGPDGLDDLAVIVADAPRWLAAGGTLVLEMAPDQTDTVATWTRDAGLDPTVHLDLAGRARAVVAHK 774
            IVE   G  P      L  LATERGV   D MV RRL GEPLQYV+G WGFRTLDL +D RVLIPRPETE VAGLA+D  R R+    R++LVADLGTGSGAIALS+A E    RV ATD SPDALAVARANLAG+GR ATRV+L EGSWF+ALP + +G+LDVV+SNPPYVA  + LP  V+ WEPS ALRAGPDG + L  IVA+APRWLA  G LVLEMAP Q  ++A   RDAG D  VH+DL+GR RA+V  +
Sbjct:   40 IVERAAGFEPAEFAVGLDTLATERGVGFLDRMVARRLEGEPLQYVVGVWGFRTLDLHIDRRVLIPRPETEEVAGLAVDAARRRAERTGREVLVADLGTGSGAIALSVAVEVPRARVYATDVSPDALAVARANLAGLGRAATRVTLAEGSWFEALPPSSRGALDVVVSNPPYVAADEPLPAEVERWEPSLALRAGPDGTEHLRAIVAEAPRWLAPDGVLVLEMAPHQVASLAEAYRDAGFDVAVHVDLSGRERAIVGRR 297          
BLAST of mRNA_M-pyrifera_M_contig89346.20710.1 vs. uniprot
Match: A0A7K1Z6P7_9ACTN (Release factor glutamine methyltransferase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z6P7_9ACTN)

HSP 1 Score: 303 bits (775), Expect = 7.080e-100
Identity = 165/265 (62.26%), Postives = 187/265 (70.57%), Query Frame = 1
Query:    1 IVEEVTGAAPGRLHDVLVDLATERGVARFDSMVERRLAGEPLQYVLGRWGFRTLDLMVDPRVLIPRPETEVVAGLAIDVL-------RGRSAIADRDLLVADLGTGSGAIALSIAAECAATRVMATDASPDALAVARANLAGIGRCATRVSLHEGSWFDALPGAVQGSLDVVISNPPYVADGDHLPDVVDAWEPSTALRAGPDGLDDLAVIVADAPRWLAAGGTLVLEMAPDQTDTVATWTRDAGLDPTVHLDLAGRARAVVAHK 774
            +VEE+TG  P  +H VL D  T R + RFD +V RR +GEPLQYVLGRWGFRTLDLMVD RVLIPRPETEVVAGLAID +       R  +  A+  + VADLGTGSGAIALSIA EC   RV ATD S DALAVARANLAGIG  A  VSLH G WF+ALP  ++G+LDVV+SNPPYVA+ + LP VV  WEP TAL A  +G  DL  IV  A RWLA  G +VLEM+P QT TV  W  D G   TVH DL GR RA+VA +
Sbjct:   46 VVEEITGVQPSGVHRVLDDRVTTRAMERFDELVARRESGEPLQYVLGRWGFRTLDLMVDKRVLIPRPETEVVAGLAIDAVDEARHQDRHVAGEAEGSVKVADLGTGSGAIALSIAVECPDVRVYATDVSEDALAVARANLAGIGSAARSVSLHHGDWFEALPYELRGTLDVVVSNPPYVAESEGLPAVVADWEPPTALWADSEGFADLRSIVTQAQRWLAPRGVIVLEMSPPQTSTVKQWCSDLGWQATVHPDLNGRLRALVARR 310          
BLAST of mRNA_M-pyrifera_M_contig89346.20710.1 vs. uniprot
Match: A0A7K1YV48_9ACTN (Release factor glutamine methyltransferase n=4 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1YV48_9ACTN)

HSP 1 Score: 290 bits (741), Expect = 7.290e-95
Identity = 159/262 (60.69%), Postives = 184/262 (70.23%), Query Frame = 1
Query:    1 IVEEVTGAAPGRLHDVLVDLATERGVARFDSMVERRLAGEPLQYVLGRWGFRTLDLMVDPRVLIPRPETEVVAGLAIDVLRGRSAI--ADRDLLVADLGTGSGAIALSIAAECAATRVMATDASPDALAVARANLAGIGRCATRVSLHEGSWFDALPGAVQGSLDVVISNPPYVADGDHLPDVVDAWEPSTALRAGPDGLDDLAVIVADAPRWLAAGGTLVLEMAPDQTDTVATWTRDAGL-DPTVHLDLAGRARAVVAHKP 777
            IVE   GAAP     VL + AT+R  A F SM+ERR AGEPLQYV+G W FRTLDLMVD RVLIPRPETEVVAGLA D +  RS     DR+++VADLGTGSGAIALS+AAEC A RV ATD S DALAVA ANLAG+GR A RV+LHEG WF+ALPGA+QGS+DVV+SNPPY+  G+ LP VV  WEP+ AL +GP G + +  +VA A  WL  GG LV+E A  +    AT    AG  D  V  DLAG  R V+   P
Sbjct:   39 IVETAAGAAPAEFEGVLDEPATKRAAAWFYSMLERRGAGEPLQYVVGSWSFRTLDLMVDRRVLIPRPETEVVAGLAADEVASRSDAPGGDREVIVADLGTGSGAIALSVAAECPAARVYATDVSADALAVASANLAGLGRAAARVTLHEGDWFEALPGALQGSIDVVVSNPPYIGTGEELPAVVADWEPAVALWSGPTGREAVEQVVAGASEWLRPGGALVMEAASHRAQESATLVSSAGFEDVRVERDLAGLERVVMGRLP 300          
BLAST of mRNA_M-pyrifera_M_contig89346.20710.1 vs. uniprot
Match: UPI001E2ACAA1 (peptide chain release factor N(5)-glutamine methyltransferase n=1 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E2ACAA1)

HSP 1 Score: 278 bits (712), Expect = 1.870e-90
Identity = 158/262 (60.31%), Postives = 184/262 (70.23%), Query Frame = 1
Query:    1 IVEEVTGAAPGRLHDVLVDLATERGVARFDSMVERRLAGEPLQYVLGRWGFRTLDLMVDPRVLIPRPETEVVAGLAIDVLRGRSAIA---DRDLLVADLGTGSGAIALSIAAECAATRVMATDASPDALAVARANLAGIGRCATRVSLHEGSWFDALPGAVQGSLDVVISNPPYVADGDHLPDVVDAWEPSTALRAGPDGLDDLAVIVADAPRWLAAGGTLVLEMAPDQTDTVATWTRDAGL-DPTVHLDLAGRARAVVAHK 774
            IVE  +G     L   L + ATERGV  FD M+ERRL GEPLQYVLGRWGFRTLDL VD RVLIPRPETE V  +A+  L      A    R   V DLGTGSGAIALS+A E     V ATDAS +AL VARANLAG+G  A R+ L EGSWF+ALP  + G++D+++SNPPYVADGD LP VV  WEP+ AL AG DGLDD+  IVADAPRWLAA G+LV+E+APDQ D        AGL +  + +DLAGRARA+VA +
Sbjct:   39 IVERASGFEGAELVLGLDEPATERGVHFFDLMLERRLRGEPLQYVLGRWGFRTLDLFVDARVLIPRPETETVVDVALAELDRSIPAARHEGRTPCVVDLGTGSGAIALSVAVERRTVEVWATDASSEALEVARANLAGLGAAAARIRLTEGSWFEALPTDLAGTVDLLVSNPPYVADGDELPAVVRDWEPAGALFAGSDGLDDIRHIVADAPRWLAAEGSLVVELAPDQADVALALASAAGLVEARIAVDLAGRARALVARR 300          
BLAST of mRNA_M-pyrifera_M_contig89346.20710.1 vs. uniprot
Match: A0A2E5ZFL7_9ACTN (Peptide chain release factor N(5)-glutamine methyltransferase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E5ZFL7_9ACTN)

HSP 1 Score: 278 bits (711), Expect = 3.670e-90
Identity = 166/271 (61.25%), Postives = 190/271 (70.11%), Query Frame = 1
Query:    1 IVEEVTGAAPGRLHDVLVDLATERGVARFDSMVERRLAGEPLQYVLGRWGFRTLDLMVDPRVLIPRPETEVVAGLAI-DVLR---GRSAIADRD-LLVADLGTGSGAIALSIAAECAATRVMATDASPDALAVARANLAGIGRCATRVSLHEGSWFDALPGAVQGSLDVVISNPPYVADGDHLPDVVDAWEPSTALRAGPDGL-----DDLAVIVADAPRWLAAGGTLVLEMAPDQTDTVATWTRDAG-LDPTVHLDLAGRARAVVAHKPA 780
            IVEE +G A     D   +LAT RG+AR D+MVERRLAGEPLQYVLGRW FRTLDLMVD RVLIPRPETEVVAGLA+ +V R   GR    D D +LVADLGTGSGAI LS+AAE   TRV   DAS DA+ VARAN AG+GR A RV + EGSWFD LP  + G LDVV+SNPPYVA  ++LP  V  WEP +AL A  DG        L ++V  AP WLA GG LVLEMA DQT  +A++    G +D  VH DLAGR RA+VA +PA
Sbjct:   44 IVEEASGGATAADLD---ELATVRGMARHDAMVERRLAGEPLQYVLGRWAFRTLDLMVDRRVLIPRPETEVVAGLALLEVDRRVEGRPVGGDGDPVLVADLGTGSGAIGLSVAAERLGTRVWCVDASADAVVVARANCAGLGRPARRVVVSEGSWFDGLPDDLAGRLDVVVSNPPYVAPDEYLPSEVVDWEPESALFAPDDGALGAGTSALRILVDGAPAWLAPGGALVLEMASDQTSAMASYAEATGYVDVAVHPDLAGRERAMVARRPA 311          
BLAST of mRNA_M-pyrifera_M_contig89346.20710.1 vs. uniprot
Match: A0A2E6ULU7_9ACTN (Release factor glutamine methyltransferase n=2 Tax=Bacteria TaxID=2 RepID=A0A2E6ULU7_9ACTN)

HSP 1 Score: 277 bits (709), Expect = 4.680e-90
Identity = 157/261 (60.15%), Postives = 186/261 (71.26%), Query Frame = 1
Query:    1 IVEEVTGAAPGRLHDVLVDLATERGVARFDSMVERRLAGEPLQYVLGRWGFRTLDLMVDPRVLIPRPETEVVAGLAIDVLRGRSAIADRDLLVADLGTGSGAIALSIAAECAATRVMATDASPDALAVARANLAGIGRCATRVSLHEGSWFDALPGAVQGSLDVVISNPPYVADGDHL-PDVVDAWEPSTALRAGPDGLDDLAVIVADAPRWLAAGGTLVLEMAPDQTDTVATWTRDAGL-DPTVHLDLAGRARAVVAHKP 777
            IVEE +G  P R  D L +L T RG+AR D ++ RRL GEPLQYVLG W FRTLDL+VD RVLIPRPETE V G A+D     +     D+ VADLGTGSGAI LS+AAE  A+RV  TD+S DALAVARANLAG+GR A+RV+L  GSWFDALP  ++G LD+++SNPPYV  G+HL P+VVD WEP  AL  GPDG +DL V+V  AP WLA GG LVLE+ P Q +++A     AGL D     DLAGR RA+VA  P
Sbjct:   38 IVEEASGLEPARDGD-LDELVTMRGMARHDDLLRRRLDGEPLQYVLGHWAFRTLDLLVDRRVLIPRPETEAVVGHALDEFDRLAVGRSGDVTVADLGTGSGAIGLSVAAERTASRVWCTDSSEDALAVARANLAGLGRPASRVTLAAGSWFDALPDDLRGRLDLLVSNPPYVGAGEHLAPEVVD-WEPDAALVPGPDGTEDLEVLVDGAPAWLAPGGALVLELDPRQVESLAARAAAAGLVDVGARPDLAGRDRALVARMP 296          
BLAST of mRNA_M-pyrifera_M_contig89346.20710.1 vs. uniprot
Match: A0A7K2E8Z9_9ACTN (Release factor glutamine methyltransferase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2E8Z9_9ACTN)

HSP 1 Score: 278 bits (711), Expect = 5.560e-90
Identity = 150/262 (57.25%), Postives = 180/262 (68.70%), Query Frame = 1
Query:    1 IVEEVTGAAPGRLHDVLVDLATERGVARFDSMVERRLAGEPLQYVLGRWGFRTLDLMVDPRVLIPRPETEVVAGLAIDVLRGRSAIA--DRDLLVADLGTGSGAIALSIAAECAATRVMATDASPDALAVARANLAGIGRCATRVSLHEGSWFDALPGAVQGSLDVVISNPPYVADGDHLPDVVDAWEPSTALRAGPDGLDDLAVIVADAPRWLAAGGTLVLEMAPDQTDTVATWTRDAGL-DPTVHLDLAGRARAVVAHKP 777
            IVE  +G +P     VL + AT    ARF SM++RR  GEPLQYV G WGFRTLDLMVD RVLIPRPETEVVAG A+D    RSA    DR+++V DLGTGSGAIALS+A EC   RV ATD S DAL+VARANLAG+GR A RVSLHEG WFDA+PGA++GS+DVV+SNPPY+  G+ LP VV  WEP  AL +GP+G + +  ++  A +WL  GG LVLE+A  +    A    + G  D  V  DLAG  R V+   P
Sbjct:   63 IVEAASGVSPAEFESVLGEPATTLTAARFRSMLDRRDGGEPLQYVTGSWGFRTLDLMVDRRVLIPRPETEVVAGWAVDEAARRSAEEGRDREVVVVDLGTGSGAIALSVAVECPQARVFATDVSVDALSVARANLAGLGRAAARVSLHEGDWFDAVPGALRGSVDVVVSNPPYIGAGEELPPVVADWEPPVALWSGPEGHEAVERVIGGASQWLGPGGALVLEVASHRAHETAHMVAETGFADVRVEQDLAGLERVVIGRLP 324          
BLAST of mRNA_M-pyrifera_M_contig89346.20710.1 vs. uniprot
Match: A0A7K1A681_9ACTN (Release factor glutamine methyltransferase n=3 Tax=root TaxID=1 RepID=A0A7K1A681_9ACTN)

HSP 1 Score: 277 bits (708), Expect = 5.830e-90
Identity = 151/239 (63.18%), Postives = 178/239 (74.48%), Query Frame = 1
Query:   64 TERGVARFDSMVERRLAGEPLQYVLGRWGFRTLDLMVDPRVLIPRPETEVVAGLAIDVLRG-RSAIADRDLLVADLGTGSGAIALSIAAECAATRVMATDASPDALAVARANLAGIGRCATRVSLHEGSWFDALPGAVQGSLDVVISNPPYVADGDHLPDVVDAWEPSTALRAGPDGLDDLAVIVADAPRWLAAGGTLVLEMAPDQTDTVATWTRDAG-LDPTVHLDLAGRARAVVAHK 774
            TERG+   D MVERRLAGEPLQYVLGRWGFRTLDL VD RVLIPRPETE+VAGLAID L+  R+A  DR + V DLGTGSGAI LS+AAE     V  TDAS DAL VAR+NLAGIGR ATRV + EGSWFDALP  ++GS+D++ISNPPYVA GD + ++V  WEP +AL AG DGLDD+  I+ DAP WL +GG L+LEM P Q +T +   R  G +    H DLAGR R++V  +
Sbjct:   54 TERGMHFHDLMVERRLAGEPLQYVLGRWGFRTLDLYVDRRVLIPRPETEMVAGLAIDELKAMRAAGIDRPVAV-DLGTGSGAIGLSLAAEVERAEVWITDASADALVVARSNLAGIGRAATRVRVEEGSWFDALPPELRGSVDLIISNPPYVAIGDEVEEIVREWEPQSALFAGEDGLDDIRTILEDAPSWLRSGGVLILEMDPLQLETASELARSFGFVGIETHADLAGRERSLVVRR 291          
BLAST of mRNA_M-pyrifera_M_contig89346.20710.1 vs. uniprot
Match: A0A351IW18_9ACTN (Peptide chain release factor N(5)-glutamine methyltransferase n=3 Tax=Acidimicrobiia TaxID=84992 RepID=A0A351IW18_9ACTN)

HSP 1 Score: 276 bits (705), Expect = 3.170e-89
Identity = 160/260 (61.54%), Postives = 179/260 (68.85%), Query Frame = 1
Query:    1 IVEEVTGAAPGRLHDVLVDLATERGVARFDSMVERRLAGEPLQYVLGRWGFRTLDLMVDPRVLIPRPETEVVAGLAIDVLRGRSAIADRDLLVADLGTGSGAIALSIAAECAATRVMATDASPDALAVARANLAGIGRCATRVSLHEGSWFDALPGAVQGSLDVVISNPPYVADGDHLPDVVDAWEPSTALRAGPDGLDDLAVIVADAPRWLAAGGTLVLEMAPDQTDTVATWTRDAG-LDPTVHLDLAGRARAVVAHKP 777
            +VEE +G       D L  L TE G+ R D+M+ RRLAGEPLQYVLGRW FRTLDLMVD RVLIPRPETEVVAGLA+      SA     +LVADLGTGSGAI LSIAAEC A  V  TD+S DALAVARAN  G+GR A RV++ EGSWFDALP  + G+ +VV+SNPPYV   D LP  V  WEPS AL A   G  DL  +V  A  WLA GG LVLEMAPDQT  +A   R AG ++  VH DLAGR RAVVA  P
Sbjct:   56 MVEEASGLDAA---DDLAGLVTESGMVRHDAMLARRLAGEPLQYVLGRWAFRTLDLMVDKRVLIPRPETEVVAGLALLEADRFSAAGGGTVLVADLGTGSGAIGLSIAAECPAAHVWCTDSSADALAVARANCTGLGRPAGRVTILEGSWFDALPPDMSGAFNVVVSNPPYVDVADDLPPEVVGWEPSEALFAPGSGRADLESLVDGAMEWLAPGGALVLEMAPDQTTAMADRARTAGFVEVCVHRDLAGRERAVVARVP 312          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89346.20710.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A358A2H0_9ACTN6.240e-10665.50Peptide chain release factor N(5)-glutamine methyl... [more]
A0A3M2G4B8_ACTSX4.640e-10464.73Release factor glutamine methyltransferase n=1 Tax... [more]
A0A7K1Z6P7_9ACTN7.080e-10062.26Release factor glutamine methyltransferase n=2 Tax... [more]
A0A7K1YV48_9ACTN7.290e-9560.69Release factor glutamine methyltransferase n=4 Tax... [more]
UPI001E2ACAA11.870e-9060.31peptide chain release factor N(5)-glutamine methyl... [more]
A0A2E5ZFL7_9ACTN3.670e-9061.25Peptide chain release factor N(5)-glutamine methyl... [more]
A0A2E6ULU7_9ACTN4.680e-9060.15Release factor glutamine methyltransferase n=2 Tax... [more]
A0A7K2E8Z9_9ACTN5.560e-9057.25Release factor glutamine methyltransferase n=1 Tax... [more]
A0A7K1A681_9ACTN5.830e-9063.18Release factor glutamine methyltransferase n=3 Tax... [more]
A0A351IW18_9ACTN3.170e-8961.54Peptide chain release factor N(5)-glutamine methyl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89346contigM-pyrifera_M_contig89346:21..806 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score253.8
Seed ortholog evalue8.6e-65
Seed eggNOG ortholog1229780.BN381_10021
Preferred nameprmC
KEGG rclassRC00003,RC03279
KEGG koko:K02493
KEGG ReactionR10806
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
EggNOG OGs2GMH1@201174,3UWRW@52018,COG2890@1,COG2890@2
EC2.1.1.297
COG Functional cat.J
Best tax levelunclassified Actinobacteria (class)
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03012
Exons1
Model size786
Cds size786
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816803.6473708-CDS-M-pyrifera_M_contig89346:20..8061622816803.6473708-CDS-M-pyrifera_M_contig89346:20..806Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89346 21..806 -
1692278188.0899088-CDS-M-pyrifera_M_contig89346:20..8061692278188.0899088-CDS-M-pyrifera_M_contig89346:20..806Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89346 21..806 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89346.20710.1prot_M-pyrifera_M_contig89346.20710.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig89346 21..806 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig89346.20710.1

>prot_M-pyrifera_M_contig89346.20710.1 ID=prot_M-pyrifera_M_contig89346.20710.1|Name=mRNA_M-pyrifera_M_contig89346.20710.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=262bp
IVEEVTGAAPGRLHDVLVDLATERGVARFDSMVERRLAGEPLQYVLGRWG
FRTLDLMVDPRVLIPRPETEVVAGLAIDVLRGRSAIADRDLLVADLGTGS
GAIALSIAAECAATRVMATDASPDALAVARANLAGIGRCATRVSLHEGSW
FDALPGAVQGSLDVVISNPPYVADGDHLPDVVDAWEPSTALRAGPDGLDD
LAVIVADAPRWLAAGGTLVLEMAPDQTDTVATWTRDAGLDPTVHLDLAGR
ARAVVAHKPAE*
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mRNA from alignment at M-pyrifera_M_contig89346:21..806-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig89346.20710.1 ID=mRNA_M-pyrifera_M_contig89346.20710.1|Name=mRNA_M-pyrifera_M_contig89346.20710.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=786bp|location=Sequence derived from alignment at M-pyrifera_M_contig89346:21..806- (Macrocystis pyrifera P11B4 male)
ATCGTCGAGGAGGTCACCGGGGCCGCGCCGGGCCGACTCCACGACGTACT CGTCGATCTCGCCACCGAGCGCGGTGTCGCCCGCTTCGACTCGATGGTCG AGCGTCGGCTCGCGGGTGAGCCGCTCCAGTACGTCCTCGGCCGCTGGGGG TTTCGCACGCTCGACCTCATGGTCGACCCGCGGGTCCTGATCCCGCGTCC GGAGACCGAGGTGGTCGCCGGGCTCGCCATCGACGTGTTGCGGGGGCGGT CGGCGATCGCTGACCGCGACCTGCTCGTCGCCGATCTCGGTACCGGCTCC GGTGCCATCGCACTCTCGATCGCGGCCGAGTGTGCGGCCACGCGAGTGAT GGCCACCGATGCCTCGCCCGATGCCCTCGCCGTGGCCCGCGCCAACCTGG CCGGTATCGGCCGTTGCGCGACCCGGGTGTCGCTCCACGAAGGCTCGTGG TTCGACGCCCTTCCCGGCGCCGTCCAGGGGTCGCTCGATGTGGTGATCTC CAACCCGCCCTATGTCGCCGACGGTGATCATCTTCCCGACGTCGTCGACG CCTGGGAACCCTCGACGGCGCTGCGGGCCGGCCCCGACGGACTCGACGAC CTCGCGGTCATCGTGGCCGATGCGCCCCGTTGGCTCGCTGCCGGTGGGAC CCTGGTGTTGGAGATGGCCCCTGACCAGACCGACACCGTCGCAACCTGGA CCCGTGACGCGGGTCTCGACCCGACCGTCCATCTCGACCTCGCGGGCCGT GCCCGAGCGGTCGTGGCCCACAAACCTGCGGAGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig89346:21..806-

>mRNA_M-pyrifera_M_contig89346.20710.1 ID=mRNA_M-pyrifera_M_contig89346.20710.1|Name=mRNA_M-pyrifera_M_contig89346.20710.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1572bp|location=Sequence derived from alignment at M-pyrifera_M_contig89346:21..806- (Macrocystis pyrifera P11B4 male)
ATCGTCGAGGAGGTCACCGGGGCCGCGCCGGGCCGACTCCACGACGTACT
CGTCGATCTCGCCACCGAGCGCGGTGTCGCCCGCTTCGACTCGATGGTCG
AGCGTCGGCTCGCGGGTGAGCCGCTCCAGTACGTCCTCGGCCGCTGGGGG
TTTCGCACGCTCGACCTCATGGTCGACCCGCGGGTCCTGATCCCGCGTCC
GGAGACCGAGGTGGTCGCCGGGCTCGCCATCGACGTGTTGCGGGGGCGGT
CGGCGATCGCTGACCGCGACCTGCTCGTCGCCGATCTCGGTACCGGCTCC
GGTGCCATCGCACTCTCGATCGCGGCCGAGTGTGCGGCCACGCGAGTGAT
GGCCACCGATGCCTCGCCCGATGCCCTCGCCGTGGCCCGCGCCAACCTGG
CCGGTATCGGCCGTTGCGCGACCCGGGTGTCGCTCCACGAAGGCTCGTGG
TTCGACGCCCTTCCCGGCGCCGTCCAGGGGTCGCTCGATGTGGTGATCTC
CAACCCGCCCTATGTCGCCGACGGTGATCATCTTCCCGACGTCGTCGACG
CCTGGGAACCCTCGACGGCGCTGCGGGCCGGCCCCGACGGACTCGACGAC
CTCGCGGTCATCGTGGCCGATGCGCCCCGTTGGCTCGCTGCCGGTGGGAC
CCTGGTGTTGGAGATGGCCCCTGACCAGACCGACACCGTCGCAACCTGGA
CCCGTGACGCGGGTCTCGACCCGACCGTCCATCTCGACCTCGCGGGCCGT
GCCCGAGCGGTCGTGGCCCACAAACCTGCGGAGTGAATCGTCGAGGAGGT
CACCGGGGCCGCGCCGGGCCGACTCCACGACGTACTCGTCGATCTCGCCA
CCGAGCGCGGTGTCGCCCGCTTCGACTCGATGGTCGAGCGTCGGCTCGCG
GGTGAGCCGCTCCAGTACGTCCTCGGCCGCTGGGGGTTTCGCACGCTCGA
CCTCATGGTCGACCCGCGGGTCCTGATCCCGCGTCCGGAGACCGAGGTGG
TCGCCGGGCTCGCCATCGACGTGTTGCGGGGGCGGTCGGCGATCGCTGAC
CGCGACCTGCTCGTCGCCGATCTCGGTACCGGCTCCGGTGCCATCGCACT
CTCGATCGCGGCCGAGTGTGCGGCCACGCGAGTGATGGCCACCGATGCCT
CGCCCGATGCCCTCGCCGTGGCCCGCGCCAACCTGGCCGGTATCGGCCGT
TGCGCGACCCGGGTGTCGCTCCACGAAGGCTCGTGGTTCGACGCCCTTCC
CGGCGCCGTCCAGGGGTCGCTCGATGTGGTGATCTCCAACCCGCCCTATG
TCGCCGACGGTGATCATCTTCCCGACGTCGTCGACGCCTGGGAACCCTCG
ACGGCGCTGCGGGCCGGCCCCGACGGACTCGACGACCTCGCGGTCATCGT
GGCCGATGCGCCCCGTTGGCTCGCTGCCGGTGGGACCCTGGTGTTGGAGA
TGGCCCCTGACCAGACCGACACCGTCGCAACCTGGACCCGTGACGCGGGT
CTCGACCCGACCGTCCATCTCGACCTCGCGGGCCGTGCCCGAGCGGTCGT
GGCCCACAAACCTGCGGAGTGA
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