mRNA_M-pyrifera_M_contig89276.20693.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig89276.20693.1
Unique NamemRNA_M-pyrifera_M_contig89276.20693.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig89276.20693.1 vs. uniprot
Match: A0A2E8AYL6_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8AYL6_9PLAN)

HSP 1 Score: 127 bits (318), Expect = 6.420e-30
Identity = 98/279 (35.13%), Postives = 144/279 (51.61%), Query Frame = 1
Query:    1 DGLGILQFLFDVLAVY-HLHFKPKDPERDGKPAFRLRTIDPSMLPERDNIDFSPPEKVG------GWKTLRFTVAETAKMLGRQPCRVRRNPASSPSESLNTTATGAIVIPQMVSAHLSTELSEAYRQRAKEKKAMANDLFLRDLFMTLANWAEECGTPLPDRRFLRLTMPISVRKREHVKMSAANVLSYGFLTRPVSMTNAPDQLLESIATETAAIKYWRLGGMFLGSIGALHKARLLSPLLRLP---ACFSSMVLSNLGDIAHAATAKFPRQDRRLV 807
            DG G +QF+ D+LA Y  L  + +DP      A  L  +   +L +R  I   PP+  G      GW      V++  + + R+P     +P   P  S ++T T     P +VS   S E +++ ++ AK++ A  NDL LRDLF+ +  W  E G      R+LR+ MP+++R  E  ++ AANVLSYGFLTR     + P QLL  I+ ET  IK+     MFL SI  L K +    L R+     C++++VLSN+GDI        P ++ RLV
Sbjct:  132 DGTGAIQFITDLLAFYGRLTCRHEDP------APELLQLQQELLRQRGRI---PPQLAGESGSRVGWTQK---VSKLFRFITRKP-----SPLGPPHGSTDSTNT-CPPFPGIVSHTFSKEETQSLKRVAKQQGASLNDLLLRDLFLVINTWNSEHGRE-GIGRWLRIMMPVNLRTEEFSRLPAANVLSYGFLTRDCRECDEPVQLLAGISRETREIKFGGSSLMFLKSINMLRKIK--GGLKRMSDPQKCYATVVLSNVGDITTRLAVSLPSRNGRLV 389          
BLAST of mRNA_M-pyrifera_M_contig89276.20693.1 vs. uniprot
Match: A0A5Q4GMG4_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A5Q4GMG4_9PLAN)

HSP 1 Score: 126 bits (316), Expect = 9.530e-30
Identity = 91/275 (33.09%), Postives = 133/275 (48.36%), Query Frame = 1
Query:    1 DGLGILQFLFDVLAVYHLHFKPKDPERDGKPAFRLRTIDPSMLPERDNIDFSPPEKVGGWKTLRFTVAETAKMLGRQPCRVRRNPASSPSESLNTTATGAIVIPQMVSAHLSTELSEAYRQRAKEKKAMANDLFLRDLFMTLANWAEECGTPLPDRRFLRLTMPISVRKREHVKMSAANVLSYGFLTRPVSMTNAPDQLLESIATETAAIKYWRLGGMFLGSI-------GALHKARLLSPLLRLPACFSSMVLSNLGDIAHAATAKFPRQDRRL 804
            DG+G ++FL D+LA Y L   P D     +P   L  +DP+ L  R   D  PP  V  W+  +  V E  K+L R+P RV + P          T +      ++V+  L  ++   Y   A    + AND+ LRD+F+T+  W    G    D  +LR+ MP ++R +  V+M A NVL Y  +T        P +LL  IA ET AI+ W LG MF+ ++       GAL          RL   ++++VLSNLGD      A+FPR  + +
Sbjct:  148 DGIGAMRFLGDLLAFYGLRTAPAD----RRPT--LLPVDPAGLAYRGIFDTRPPVPVTRWEASKGMVREVWKVLSRRP-RVLQGPR-------RPTGSSEAEKRKLVTTTLPEQVYLRYSHEASALGSTANDVLLRDMFLTVEAWNRRWGVRRQDG-WLRINMPTALRGKRDVRMPATNVLGYALITHHTRECRDPARLLREIARETEAIRTWSLGAMFVEALRIVDRVPGALWLGT------RLSRRYATVVLSNLGDPTRRFRARFPRVGKEI 401          
BLAST of mRNA_M-pyrifera_M_contig89276.20693.1 vs. uniprot
Match: A0A7V8V9D2_9BACT (Uncharacterized protein n=1 Tax=Bremerella alba TaxID=980252 RepID=A0A7V8V9D2_9BACT)

HSP 1 Score: 109 bits (273), Expect = 9.100e-24
Identity = 88/276 (31.88%), Postives = 122/276 (44.20%), Query Frame = 1
Query:    1 DGLGILQFLFDVLAVYHLHFKPKDPERDGKPAFRLRTIDPSMLPERDNIDFSPPEKVGGWKTLRFTV------AETAKMLGRQPCRVRRNPASSPS-ESLNTTATGAIVIPQMVSAHLSTELSEAYRQRAKEKKAMANDLFLRDLFMTLANWAEECGTPLPDRRFLRLTMPISVRKREHVKMSAANVLSYGFLTRPVSMTNAPDQLLESIATETAAIKYWRLGGMFLGSIGALHKARLLSPLLRLPACFSSMVLSNLGDIAHAATAKFPRQDRRLV 807
            DG+G + F+ D+L  YH           G    + R  +P  L  R N     P    GWK   + V      A    M    P   +R+P    +    N   T A+          S E + A R+    +K   ND+ LRDLF+TL +W    G  +  R +LR+ MP S+R R    M   N + + FL R  +M   PD+LLES+  ETAAI+   L   F+G + A+    LL  LL   +CFS+ VL+N G+      AK P  D  L 
Sbjct:  153 DGVGSIAFVEDLLTAYH-------NATPGTKFVKPRKWEPERLLNRCNSALKNP----GWKRGLYDVYCGIYGASNFFMQRPLPLTDKRSPLGDDAMRQQNGHITKAV----------SPEATLAMRKWTSARKVTVNDVLLRDLFVTLNDWMSNQGIDIGSR-YLRILMPQSLRGRGDGAMPTTNDIGFAFLARRGNMIRKPDELLESLVPETAAIRKDNLSRHFIGGLAAVQTLGLLPSLLNGSSCFSTAVLTNFGNSWRRFQAKLPPTDGGLT 406          
BLAST of mRNA_M-pyrifera_M_contig89276.20693.1 vs. uniprot
Match: A0A2S8F5X8_9BACT (Uncharacterized protein n=1 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8F5X8_9BACT)

HSP 1 Score: 103 bits (257), Expect = 1.330e-21
Identity = 84/275 (30.55%), Postives = 122/275 (44.36%), Query Frame = 1
Query:    1 DGLGILQFLFDVLAVYHLHFKPKDPERDGKPAFRLRTIDPSMLPERDNIDFSPPEKVGGWKTLRFTV------AETAKMLGRQPCRVRRNPASSPSESLNTTATGAIVIPQMVSAHLSTELSEAYRQRAKEKKAMANDLFLRDLFMTLANWAEECGTPLPDRRFLRLTMPISVRKREHVKMSAANVLSYGFLTRPVSMTNAPDQLLESIATETAAIKYWRLGGMFLGSIGALHKARLLSPLLRLPACFSSMVLSNLGDIAHAATAKFPRQDRRLV 807
            DG+G + F+ D+L  YH           G      R  +P  L  R N     P    GW+   + V      A    M    P   +R P       +NTT      I + V +    E + A R+    +K   ND+ LRDLF+TL +W  + G  +  + +LR+ MP S+R R    M   N + + F+ R  ++    D LL S+A ETAAI+   L   F+G + A+    LL  +L   +CFS+ VL+N G+      AK P  D  LV
Sbjct:  143 DGVGSIAFVEDLLTAYH-------NATPGTKFVPPRKWEPERLLNRCNSALESP----GWRRGLYDVYCGIYGASNFFMQRPLPLTAKRGPLG-----VNTTRQQNGHITKAVGS----EATLAMRKWTSAEKVTVNDVLLRDLFVTLHDWMSDQGIDIGSK-YLRILMPQSLRGRGDAAMPTTNDIGFAFMARRGNLIRKSDDLLRSLAPETAAIRKDNLSRHFIGGLAAVQSLGLLPWMLNGASCFSTAVLTNFGNSWRRFQAKLPLADGGLV 396          
BLAST of mRNA_M-pyrifera_M_contig89276.20693.1 vs. uniprot
Match: A0A518CAU8_9BACT (Condensation domain protein n=1 Tax=Bremerella volcania TaxID=2527984 RepID=A0A518CAU8_9BACT)

HSP 1 Score: 102 bits (255), Expect = 2.500e-21
Identity = 83/274 (30.29%), Postives = 125/274 (45.62%), Query Frame = 1
Query:    1 DGLGILQFLFDVLAVYHLHFKPKDPERDGKPAFRLRTIDPSMLPERDNIDFSPPEKVGGWKTLRFTVAETAKMLGRQPCRVRRN-PASSPSESLNTTATGAIVIPQMVSAHL----STELSEAYRQRAKEKKAMANDLFLRDLFMTLANWAEECGTPLPDRRFLRLTMPISVRKREHVKMSAANVLSYGFLTRPVSMTNAPDQLLESIATETAAIKYWRLGGMFLGSIGALHKARLLSPLLRLPACFSSMVLSNLGDIAHAATAKFPRQDRRLV 807
            DG+G + F+ D+L  YH           G    + R  +P  L  R N     P    GW+   + V     + G     ++R  P ++   SL   AT      +  + H+    S+E + A R+    +K   ND+ LRDLF+TL +W  + G  +  R  LR+ MP S+R R    M   N + + F+ R   +   PD LL S+A ETAAI+   L   F+G + A+    LL  +L   +CFS+ VL+N G+      AK P  +  L 
Sbjct:  143 DGVGSIAFVEDLLTAYH-------NATPGTKFVKPRKWEPERLLNRCNSSLDNP----GWRRGLYDVY--CGIYGASNFFLQRPLPMTAKHSSLADDAT------RQQNGHITKAVSSEATLAMRKWTSAEKVTVNDVLLRDLFVTLHDWMSDQGIDIGSRH-LRILMPQSLRGRGDGAMPTTNDIGFAFMARRGDLIRTPDDLLRSLAPETAAIRKDNLSRHFIGGLAAVQSLGLLPWMLNGSSCFSTAVLTNFGNSWRRFQAKLPPAEGGLT 396          
BLAST of mRNA_M-pyrifera_M_contig89276.20693.1 vs. uniprot
Match: A0A2S8GD10_9BACT (Uncharacterized protein n=1 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8GD10_9BACT)

HSP 1 Score: 95.1 bits (235), Expect = 1.280e-18
Identity = 78/272 (28.68%), Postives = 114/272 (41.91%), Query Frame = 1
Query:    1 DGLGILQFLFDVLAVYHLHFKPKDPERDGKPAFRLRTIDPSMLPERDNIDFSPPEKVGGWKTLRFTVAETAKMLGRQPCRVRRN---PASSPSESLNTTATGAIVIPQMVSAHLSTELSEAYRQRAKEKKAMANDLFLRDLFMTLANWAEECGTPLPDRRFLRLTMPISVRKREHVKMSAANVLSYGFLTRPVSMTNAPDQLLESIATETAAIKYWRLGGMFLGSIGALHKARLLSPLLRLPACFSSMVLSNLGDIAHAATAKFPRQDRRLV 807
            DGLG   F+ D+L+ YH           G    + R  +P  L +R       P    G   L   +         +P  +      PA   ++  N   T  + +P         + + + R     +K   ND+ LRDLF+ L  W    G  +  RR LR+ MP S+R R    M + N L + FL R   +  +P  LLES+  E AAI+   L   F+G +  + K  LL  LL   +CFS+ VL+N G+       K P+    LV
Sbjct:  143 DGLGAFVFVEDLLSGYH-------NATPGVAPVKPRAWEPERLRKRCTHQLENPGLTRGLYDLYCGIRGATNFFMERPLPMTAGKPLPAKGSAKLQNGLIT--LAVPP--------DATRSLRSWTSARKVTLNDVLLRDLFVALHTWMSNQGHEIGSRR-LRILMPQSLRGRGDGAMPSTNDLGFAFLARRGPIIESPQNLLESLTPELAAIRKDNLSRHFIGGLEMVQKLGLLPWLLNGSSCFSTAVLTNFGNAWRRFQTKLPKAQGGLV 396          
BLAST of mRNA_M-pyrifera_M_contig89276.20693.1 vs. uniprot
Match: A0A5C5YVX8_9BACT (Condensation domain protein n=1 Tax=Planctomycetes bacterium CA13 TaxID=2527986 RepID=A0A5C5YVX8_9BACT)

HSP 1 Score: 94.7 bits (234), Expect = 1.670e-18
Identity = 72/269 (26.77%), Postives = 121/269 (44.98%), Query Frame = 1
Query:    1 DGLGILQFLFDVLAVYHLHFKPKDPERDGKPAFRLRTIDPSMLPERDNIDFSPPEKVGGWKTLRFTVAETAKMLGRQPCRVRRNPASSPSESLNTTATGAIVIPQMVSAHLSTELSEAYRQRAKEKKAMANDLFLRDLFMTLANWAEECGTPLPDRRFLRLTMPISVRKREHVKMSAANVLSYGFLTRPVSMTNAPDQLLESIATETAAIKYWRLGGMFLGSIGALHK---ARLLSPLLRLPACFSSMVLSNLGDIAHAATAKFPRQDR 798
            DG+  ++F  DV A+Y       DP +  +P  R  T       +R N+D + PE V     L+FT  E+ + + R   R     A    ++      G +   +M+    + E SE         +A  N+  +  L   +A W ++   P   R +L   MP+ +R R+ V++SAAN++ YGFL R        D  ++S+  E+  I+ W++ GMFL  + A+ +   A   +     PA   + V++N+GD       K P  +R
Sbjct:  134 DGVSFVEFCGDVFAIYAASIGNFDPAKIRRPTHRYLT-------QRANVDLAIPEPVSRSTALKFTAKESLRFVTR---RAETVAADIERDTTQRDRCGGL---RMMEVPFNLEESERVFAANTNGEASLNEWAILALMRVIAKWNDDHNAP-SRRGWLVTNMPVLLRPRKAVRISAANMIGYGFLARQRDGIEDWDSAIQSLTEESRFIQRWKVAGMFLNGVAAVRRIPGALFFATRTTRPA---TCVVTNIGDPTRRFRNKLPLDER 385          
BLAST of mRNA_M-pyrifera_M_contig89276.20693.1 vs. uniprot
Match: A0A3L7URA8_9BACT (Condensation domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7URA8_9BACT)

HSP 1 Score: 94.7 bits (234), Expect = 1.920e-18
Identity = 79/270 (29.26%), Postives = 125/270 (46.30%), Query Frame = 1
Query:    1 DGLGILQFLFDVLAVYHLHFKPKDPERDGKPAFRLRTIDPSMLPERDNIDFSPPEKVGGWKTLRFTVAETAKMLGRQPCRVRRNPASSPSESLNTTATGAIVIPQMVSAHLSTELSEAYRQRAKEKKAMANDLFLRDLFMTLANWAEECGTPLPDRRFLRLTMPISVRKREHVKMSAANVLSYGFLTRPVSMTNAPDQLLESIATETAAIKYWRLGGMFLGSIGALHK-ARLLSPLLRLPACFSSMVLSNLGDIAHAATAKFPRQDRRLV 807
            DG+G +Q L ++LA Y       D +R   P F     +  +L ER+N D          KTL+ TV + +++L R+P  +  +  SS   S  T            +AH         R  A       NDLF+    + +  W  +   P   ++++RL++P+S+R R H  M  ANV+SY F+TR     +  D LL+SI  +T  + + R G + L     L K  R +   L L +C S+ VL+N+GDI      +FP  + + +
Sbjct:  155 DGIGGIQILGELLARYGQKTGAADAKR---PVFDEPRKE--LLLERENYDGGHATAERQKKTLKKTVGKISRLLLRKPVTLAPSVVSSALPSSATRXXXXXXXXXXXAAH------RKLRAVAATHDVSINDLFIAQFLLHIRRWNSKI-LPENGKKWIRLSIPVSMRTRIHDHMPGANVVSYAFVTRRQHECDDLDALLKSIHRQTGDVVFNREGIVCLKIFKVLRKFPRGMKMFLGLKSCLSTAVLANVGDIRRRFNGRFPLNNGKWI 412          
BLAST of mRNA_M-pyrifera_M_contig89276.20693.1 vs. uniprot
Match: M5S6U6_9BACT (Condensation domain protein n=1 Tax=Rhodopirellula europaea SH398 TaxID=1263868 RepID=M5S6U6_9BACT)

HSP 1 Score: 89.4 bits (220), Expect = 1.220e-16
Identity = 73/269 (27.14%), Postives = 123/269 (45.72%), Query Frame = 1
Query:    1 DGLGILQFLFDVLAVYHLHFKPKDPERDGKPAFRLRTIDPSMLPERDNIDFSPPEKVGGWKTLRFTVAETAKMLGRQPCRVRRNPASSPSESLNTTATGAIVIPQMVSAHLSTELSEAYRQRAKEKKAMANDLFLRDLFMTLANWAEECGTPLPDRRFLRLTMPISVRKREHVKMSAANVLSYGFLTRPVSMTNAPDQLLESIATETAAIKYWRLGGMFLGSIGALHKA-RLLSPLLRLPACFSSMVLSNLGDIAHAATAKFPRQDRRL 804
            DGL I Q + ++L  Y +       E D      L  +D S+L  R ++  +     G +  LR    +   + G      R+     P           +  P +++ H   E+S   R+ AK +K   NDL +RDLF+ L  +    G   P   +LRL +P+S+R++   +  AAN++S  FL R  +     + LL+ ++ E + IK+ +L  +FL S+ A     R L    R   C +++V +NL  +   + +  PRQ+ RL
Sbjct:  124 DGLAIFQVVHELLLAYAM-------EVDTNADVSLPEVDLSLLRNRGSLGLT----AGSF--LRLASRQAVGLRGVWQFLTRKPSHLLPHRVPQREEPAPVSFPTVIAHHFEPEVSSGVRRAAKREKVTQNDLLIRDLFLALEEFRRSQGVHDP-AGWLRLMIPVSLRRKHQYQAPAANIVSSVFLDRRATDMEDSEHLLQDLSEEMSLIKHRQLNHLFLYSLWAQRLVPRGLQRTARPKRCQTTVVFTNLSRVF--SRSPLPRQEGRL 376          
BLAST of mRNA_M-pyrifera_M_contig89276.20693.1 vs. uniprot
Match: Q7ULA2_RHOBA (Uncharacterized protein n=4 Tax=Rhodopirellula baltica TaxID=265606 RepID=Q7ULA2_RHOBA)

HSP 1 Score: 89.4 bits (220), Expect = 1.220e-16
Identity = 77/277 (27.80%), Postives = 126/277 (45.49%), Query Frame = 1
Query:    1 DGLGILQFLFDVLAVYHLHFKPKDPERDGKPAFRLRTIDPSMLPERDNIDFS--------PPEKVGGWKTLRFTVAETAKMLGRQPCRVRRNPASSPSESLNTTATGAIVIPQMVSAHLSTELSEAYRQRAKEKKAMANDLFLRDLFMTLANWAEECGTPLPDRRFLRLTMPISVRKREHVKMSAANVLSYGFLTRPVSMTNAPDQLLESIATETAAIKYWRLGGMFLGSIGALHKA-RLLSPLLRLPACFSSMVLSNLGDIAHAATAKFPRQDRRL 804
            DGL I Q + ++L  Y +         D K    L  ID S+L  R +I  +          + VG     +F   + +++L   P RV +    +P              P +++ H   ++S   R+ AK  K   NDL +RDLF+ L  +    G   P   +LRL +P+S+R++   +  AAN++S  FL R       P+ LL+ ++ E + IK+ +L  +FL S+ A     + L    R   C +++V +NL  +   A +  PR D RL
Sbjct:  124 DGLAIFQVVHELLLAYAMQV-------DEKAGVSLPEIDLSLLQNRGSIGLTRGSFLRLASRQAVGLRGVWQFLTRKPSQLL---PHRVPQRDEPAPPS-----------FPSVIAHHFQPDVSAGVRRAAKLAKVTQNDLLIRDLFLALEEFRRSHGVHDPTA-WLRLMIPVSMRRKHQYQAPAANIVSSVFLDRRAIDMEEPEHLLQDLSEEMSLIKHRQLNHLFLYSLWAQRMLPQGLQRTARPKRCQTTVVFTNLSRVF--ARSPLPRIDGRL 376          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89276.20693.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A2E8AYL6_9PLAN6.420e-3035.13Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
A0A5Q4GMG4_9PLAN9.530e-3033.09Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
A0A7V8V9D2_9BACT9.100e-2431.88Uncharacterized protein n=1 Tax=Bremerella alba Ta... [more]
A0A2S8F5X8_9BACT1.330e-2130.55Uncharacterized protein n=1 Tax=Blastopirellula ma... [more]
A0A518CAU8_9BACT2.500e-2130.29Condensation domain protein n=1 Tax=Bremerella vol... [more]
A0A2S8GD10_9BACT1.280e-1828.68Uncharacterized protein n=1 Tax=Blastopirellula ma... [more]
A0A5C5YVX8_9BACT1.670e-1826.77Condensation domain protein n=1 Tax=Planctomycetes... [more]
A0A3L7URA8_9BACT1.920e-1829.26Condensation domain-containing protein n=1 Tax=Pla... [more]
M5S6U6_9BACT1.220e-1627.14Condensation domain protein n=1 Tax=Rhodopirellula... [more]
Q7ULA2_RHOBA1.220e-1627.80Uncharacterized protein n=4 Tax=Rhodopirellula bal... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89276contigM-pyrifera_M_contig89276:2..808 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score109.0
Seed ortholog evalue3.5e-21
Seed eggNOG ortholog314230.DSM3645_26019
Hectar predicted targeting categoryother localisation
EggNOG free text desc.D-alanine [D-alanyl carrier protein] ligase activity
EggNOG OGs2IZSG@203682,COG1020@1,COG1020@2
COG Functional cat.Q
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size807
Cds size807
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816802.8524127-CDS-M-pyrifera_M_contig89276:1..8081622816802.8524127-CDS-M-pyrifera_M_contig89276:1..808Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89276 2..808 +
1692278187.6776602-CDS-M-pyrifera_M_contig89276:1..8081692278187.6776602-CDS-M-pyrifera_M_contig89276:1..808Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89276 2..808 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89276.20693.1prot_M-pyrifera_M_contig89276.20693.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig89276 2..808 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig89276.20693.1

>prot_M-pyrifera_M_contig89276.20693.1 ID=prot_M-pyrifera_M_contig89276.20693.1|Name=mRNA_M-pyrifera_M_contig89276.20693.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=269bp
DGLGILQFLFDVLAVYHLHFKPKDPERDGKPAFRLRTIDPSMLPERDNID
FSPPEKVGGWKTLRFTVAETAKMLGRQPCRVRRNPASSPSESLNTTATGA
IVIPQMVSAHLSTELSEAYRQRAKEKKAMANDLFLRDLFMTLANWAEECG
TPLPDRRFLRLTMPISVRKREHVKMSAANVLSYGFLTRPVSMTNAPDQLL
ESIATETAAIKYWRLGGMFLGSIGALHKARLLSPLLRLPACFSSMVLSNL
GDIAHAATAKFPRQDRRLV
back to top

mRNA from alignment at M-pyrifera_M_contig89276:2..808+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig89276.20693.1 ID=mRNA_M-pyrifera_M_contig89276.20693.1|Name=mRNA_M-pyrifera_M_contig89276.20693.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=807bp|location=Sequence derived from alignment at M-pyrifera_M_contig89276:2..808+ (Macrocystis pyrifera P11B4 male)
GATGGGCTTGGGATCCTGCAGTTTTTGTTTGATGTGTTAGCCGTTTATCA CCTCCACTTTAAACCAAAGGATCCAGAGCGTGACGGGAAACCAGCTTTCC GGCTACGCACAATCGATCCATCGATGTTGCCAGAACGAGACAACATCGAT TTTTCACCGCCCGAAAAAGTTGGAGGCTGGAAAACGCTCCGCTTCACCGT CGCCGAAACCGCCAAGATGCTAGGGCGTCAACCATGTCGGGTTCGTCGCA ACCCGGCATCCTCCCCATCGGAAAGTCTCAACACGACCGCAACAGGAGCG ATCGTCATTCCGCAAATGGTCTCGGCCCATCTCTCAACAGAACTAAGCGA GGCGTACCGGCAGCGAGCCAAAGAGAAGAAGGCCATGGCCAACGATCTGT TTTTGCGCGATCTTTTTATGACTCTGGCAAATTGGGCCGAAGAGTGTGGC ACCCCGCTCCCCGACCGTCGGTTCTTACGGCTAACGATGCCGATCAGCGT CCGCAAACGCGAGCACGTCAAAATGTCCGCCGCCAATGTCCTCAGCTATG GTTTTTTAACGCGTCCTGTTTCCATGACCAACGCACCCGACCAGTTGCTA GAGAGCATTGCAACCGAAACCGCGGCCATTAAATATTGGCGACTGGGTGG AATGTTTCTCGGGAGCATCGGGGCGTTACACAAGGCAAGGCTACTGTCAC CCCTTTTAAGGTTGCCAGCCTGCTTTTCAAGCATGGTCCTTTCGAATCTA GGGGACATCGCTCACGCAGCGACCGCGAAATTTCCCAGGCAAGATCGGCG ATTGGTA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig89276:2..808+

>mRNA_M-pyrifera_M_contig89276.20693.1 ID=mRNA_M-pyrifera_M_contig89276.20693.1|Name=mRNA_M-pyrifera_M_contig89276.20693.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1614bp|location=Sequence derived from alignment at M-pyrifera_M_contig89276:2..808+ (Macrocystis pyrifera P11B4 male)
GATGGGCTTGGGATCCTGCAGTTTTTGTTTGATGTGTTAGCCGTTTATCA
CCTCCACTTTAAACCAAAGGATCCAGAGCGTGACGGGAAACCAGCTTTCC
GGCTACGCACAATCGATCCATCGATGTTGCCAGAACGAGACAACATCGAT
TTTTCACCGCCCGAAAAAGTTGGAGGCTGGAAAACGCTCCGCTTCACCGT
CGCCGAAACCGCCAAGATGCTAGGGCGTCAACCATGTCGGGTTCGTCGCA
ACCCGGCATCCTCCCCATCGGAAAGTCTCAACACGACCGCAACAGGAGCG
ATCGTCATTCCGCAAATGGTCTCGGCCCATCTCTCAACAGAACTAAGCGA
GGCGTACCGGCAGCGAGCCAAAGAGAAGAAGGCCATGGCCAACGATCTGT
TTTTGCGCGATCTTTTTATGACTCTGGCAAATTGGGCCGAAGAGTGTGGC
ACCCCGCTCCCCGACCGTCGGTTCTTACGGCTAACGATGCCGATCAGCGT
CCGCAAACGCGAGCACGTCAAAATGTCCGCCGCCAATGTCCTCAGCTATG
GTTTTTTAACGCGTCCTGTTTCCATGACCAACGCACCCGACCAGTTGCTA
GAGAGCATTGCAACCGAAACCGCGGCCATTAAATATTGGCGACTGGGTGG
AATGTTTCTCGGGAGCATCGGGGCGTTACACAAGGCAAGGCTACTGTCAC
CCCTTTTAAGGTTGCCAGCCTGCTTTTCAAGCATGGTCCTTTCGAATCTA
GGGGACATCGCTCACGCAGCGACCGCGAAATTTCCCAGGCAAGATCGGCG
ATTGGTAGATGGGCTTGGGATCCTGCAGTTTTTGTTTGATGTGTTAGCCG
TTTATCACCTCCACTTTAAACCAAAGGATCCAGAGCGTGACGGGAAACCA
GCTTTCCGGCTACGCACAATCGATCCATCGATGTTGCCAGAACGAGACAA
CATCGATTTTTCACCGCCCGAAAAAGTTGGAGGCTGGAAAACGCTCCGCT
TCACCGTCGCCGAAACCGCCAAGATGCTAGGGCGTCAACCATGTCGGGTT
CGTCGCAACCCGGCATCCTCCCCATCGGAAAGTCTCAACACGACCGCAAC
AGGAGCGATCGTCATTCCGCAAATGGTCTCGGCCCATCTCTCAACAGAAC
TAAGCGAGGCGTACCGGCAGCGAGCCAAAGAGAAGAAGGCCATGGCCAAC
GATCTGTTTTTGCGCGATCTTTTTATGACTCTGGCAAATTGGGCCGAAGA
GTGTGGCACCCCGCTCCCCGACCGTCGGTTCTTACGGCTAACGATGCCGA
TCAGCGTCCGCAAACGCGAGCACGTCAAAATGTCCGCCGCCAATGTCCTC
AGCTATGGTTTTTTAACGCGTCCTGTTTCCATGACCAACGCACCCGACCA
GTTGCTAGAGAGCATTGCAACCGAAACCGCGGCCATTAAATATTGGCGAC
TGGGTGGAATGTTTCTCGGGAGCATCGGGGCGTTACACAAGGCAAGGCTA
CTGTCACCCCTTTTAAGGTTGCCAGCCTGCTTTTCAAGCATGGTCCTTTC
GAATCTAGGGGACATCGCTCACGCAGCGACCGCGAAATTTCCCAGGCAAG
ATCGGCGATTGGTA
back to top