mRNA_M-pyrifera_M_contig89259.20686.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig89259.20686.1
Unique NamemRNA_M-pyrifera_M_contig89259.20686.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig89259.20686.1 vs. uniprot
Match: A0A2D5W612_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5W612_9BACT)

HSP 1 Score: 223 bits (568), Expect = 2.490e-66
Identity = 116/245 (47.35%), Postives = 156/245 (63.67%), Query Frame = 1
Query:   28 LAADPAWSVRSAAVWGLEAAARAGSRPALEVLVERVGAEANLQTQWLLVGRLQALSGMGHRVNPGAWQNWLANLPEDWTPGEAAGAGELGDDRTQAQFAGLRLLSTQLAFLIDLSGSIWNEKNGKLPKDVAGEHLNAALDRLTEDTLFNVIPYTNTPHPWEDELVRAKRKQVENAKEEFADCRERGAGNVFDAIVLALEDERTDNLVILTDGAPSGGTRWNLNLLVPELLERNRYRSVVYDTLIV 762
            LAA P  +VR AA   L++ A   SR  L V+VER+ AE+ L+ +W  V  L+ L+GM HR++P  W+  + +L ++W P  +A +     +   + F GL ++S +L FL+D SGSIW ++  +  KDVAGE L  AL+ L E T FNVIPYT  PHPW+DELV A ++ V  A + F  C ERG GN +DA  LALEDE  D ++ LTDGAP+GG RWNL L+   L E NRYR V +D L+V
Sbjct:  248 LAAAPEMAVRKAA---LDSLAAQESRAGLMVMVERLEAESELRLRWRAVDHLRRLTGMKHRLDPRPWRRLVESLDQNWRPASSASSAPAPAEDATSSFVGLPVISERLCFLVDFSGSIWEDRGDRTRKDVAGEELRKALESLPETTHFNVIPYTGKPHPWQDELVPATKRNVRAALDYFDGCNERGTGNFWDAARLALEDESVDTIMALTDGAPTGGHRWNLELMADLLPELNRYRRVAFDALLV 489          
BLAST of mRNA_M-pyrifera_M_contig89259.20686.1 vs. uniprot
Match: A0A2E5X2P5_9BACT (VWFA domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E5X2P5_9BACT)

HSP 1 Score: 218 bits (556), Expect = 6.640e-66
Identity = 116/246 (47.15%), Postives = 154/246 (62.60%), Query Frame = 1
Query:   28 LAADPAWSVRSAAVWGLEAAARAGSRPALEVLVERVGAEANLQTQWLLVGRLQALSGMGHRVNPGAWQNWLANLPEDWTPGEAAGAGELGDDRTQAQFAGLRLLSTQLAFLIDLSGSIWNEKNG-KLPKDVAGEHLNAALDRLTEDTLFNVIPYTNTPHPWEDELVRAKRKQVENAKEEFADCRERGAGNVFDAIVLALEDERTDNLVILTDGAPSGGTRWNLNLLVPELLERNRYRSVVYDTLIV 762
            LAADP  +VR AA   L+  A   S+ AL VLVER+  E+ L+ +W  VG L+ L+GM HR++P  W+       E W P   + A +   D   + F GL ++S ++ FL+D SGSIW E+ G +  KDVA + L  AL+ L E T FNVIPYT TPHPW++ELV A  + V  A + F  C ERG GN +DA +LAL DE  D ++ LTDGAP+GG RWNL L+   L E++RYR V +D L+V
Sbjct:  121 LAADPEMAVRKAA---LDTLAALESKAALLVLVERLEKESELRLRWRAVGHLRRLTGMKHRLDPRPWRRLAEEATEGWRPVRGSSADQTHPDNATSSFVGLPVISERVCFLVDFSGSIWMERGGGRTRKDVAADELRQALESLPETTHFNVIPYTETPHPWQEELVPATERNVRAAIKFFDGCNERGTGNFWDAALLALTDESVDTIMALTDGAPTGGRRWNLELMADLLPEQSRYRQVAFDVLLV 363          
BLAST of mRNA_M-pyrifera_M_contig89259.20686.1 vs. uniprot
Match: A0A523PNP3_9BACT (VWFA domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PNP3_9BACT)

HSP 1 Score: 208 bits (529), Expect = 1.610e-60
Identity = 114/251 (45.42%), Postives = 158/251 (62.95%), Query Frame = 1
Query:   13 SVAGELAADPAWSVRSAAVWGLEAAARAGSRPALEVLVERVGAEANLQTQWLLVGRLQALSGMGHRVNPGAWQNWLANLPEDWTPGEAAGAGELGDDRTQAQFAGLRLLSTQLAFLIDLSGSIWNEKNGKLP-KDVAGEHLNAALDRLTEDTLFNVIPYTNTPHPWEDELVRAKRKQVENAKEEFADCRERGAGNVFDAIVLALEDERTDNLVILTDGAPSGGTRWNLNLLVPELLERNRYRSVVYDTLIV 762
            S+A    AD A +VR AA+   E  ARA +R  L  +VE++  E   +  W +V  LQ  +GM +R +P  W+ ++A LP DW PG  A   ELG+       AG+ LLS ++ FL+D SGS+W ++ G+L  K++    + AAL+ L E T FN+IPYT+ P PW+  LV AKR  V  A   F DC+  G GNVFDA++LAL D   D LVILTDGAP+GG  WNL+L+V  L+E +RYR VV+D++++
Sbjct:  239 SLARRHLADSAPAVRGAAI---EILARAPTRAGLRAMVEQMADEPRTRLGWRMVACLQHATGMLYRYDPRPWRLYVAGLPADWAPGAPAPPRELGN--RSIALAGMPLLSDRVTFLVDFSGSLWQQRVGELTRKEILDAKVRAALESLPEGTAFNLIPYTSRPIPWQAALVEAKRSTVSAAVRFFEDCKATGTGNVFDAVLLALSDPDVDTLVILTDGAPTGGRHWNLDLMVELLVEESRYRGVVFDSILI 484          
BLAST of mRNA_M-pyrifera_M_contig89259.20686.1 vs. uniprot
Match: A0A2D5AXR2_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5AXR2_9BACT)

HSP 1 Score: 199 bits (507), Expect = 2.880e-57
Identity = 111/248 (44.76%), Postives = 155/248 (62.50%), Query Frame = 1
Query:   25 ELAADPAWSVRSAAVWGLEAAARAGSRPALEVLVERVGAEANLQTQWLLVGRLQALSGMGHRVNPGAWQNWLANLPEDWTPGEAAGAG-ELGDDRTQAQFAGLRLLSTQLAFLIDLSGSIWNEK-NGKLPKDVAGEHLNAALDRLTEDTLFNVIPYTNTPHPWEDELVRAKRKQVENAKEEFADCRERGAGNVFDAIVLALEDERTDNLVILTDGAPSGGTRWNLNLLVPELLERNRYRSVVYDTLIV 762
            +L  DP+ +VR+ A+   EAAAR G    + +LVER+  E N + +W +V  L+ LSG  H  +P  W++WL  LP DW+       G   G     A FAGL +LS +L  LIDLSGSIW E+ +GK  K+   E L  AL RL ED  FN+IP+T  P PW+++LV A+ + V +A   F   RE G+GN++DAI LAL+D  TD +++L+DGAP+GG R  L L+VP LL +N  R+V +D ++V
Sbjct:  250 DLVEDPSRAVRTRAI---EAAARIGRPATVSLLVERLTQEPNPRLRWRIVQLLRGLSGTKHGRDPRPWRDWLKKLPVDWSGRSVPLLGIRAGPGDRSATFAGLPILSNRLTILIDLSGSIWQERADGKSKKEKVDERLREALHRLPEDARFNLIPFTGKPIPWKEQLVEARPRNVASALRFFEGLRESGSGNIWDAIQLALQDPETDTIILLSDGAPTGGRRHRLELIVPLLLLQNATRAVAFDLVLV 494          
BLAST of mRNA_M-pyrifera_M_contig89259.20686.1 vs. uniprot
Match: A0A2D6HJL6_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HJL6_9BACT)

HSP 1 Score: 193 bits (491), Expect = 1.350e-54
Identity = 111/246 (45.12%), Postives = 144/246 (58.54%), Query Frame = 1
Query:   28 LAADPAWSVRSAAVWGLEAAARAGSRPALEVLVERVGAEANLQTQWLLVGRLQALSGMGHRVNPGAWQNWLANLPEDWTPGEAAGAGELGDDRTQAQFAGLRLLSTQLAFLIDLSGSIWNEKNG-KLPKDVAGEHLNAALDRLTEDTLFNVIPYTNTPHPWEDELVRAKRKQVENAKEEFADCRERGAGNVFDAIVLALEDERTDNLVILTDGAPSGGTRWNLNLLVPELLERNRYRSVVYDTLIV 762
            LAAD    VR AA   LE   RA +R A  +L  R+  E   + +W  V  L+ LSGMG+ ++  +W++WL  L  D   G      E G  RT     GL +LS ++ FLID SGS+W E+ G +  K    E L   L  L E T FN+IPYT+ PHPW DELV+A  + V  A   F DCRE G G+ + A +LALED   D +V+LTDGAP+GG RW L LLVP L+E NRYR   +D+++V
Sbjct:  293 LAADDELVVRRAA---LEVLGRAETRAAAALLCGRLEVEQRERLRWRAVELLRELSGMGYGLDARSWRHWLERLEGDPVRGGGP-IDEAGGPRTTT-LVGLPILSDRVCFLIDFSGSLWYEREGGRTRKQAVAERLRETLPALGEQTRFNLIPYTDRPHPWSDELVQATPRNVRRALAWFEDCRESGTGDFYQAALLALEDPEVDTVVVLTDGAPTGGRRWKLELLVPALVEVNRYRGAAFDSIVV 533          
BLAST of mRNA_M-pyrifera_M_contig89259.20686.1 vs. uniprot
Match: A0A2D6HB36_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HB36_9BACT)

HSP 1 Score: 183 bits (465), Expect = 2.450e-51
Identity = 113/256 (44.14%), Postives = 157/256 (61.33%), Query Frame = 1
Query:    1 AADWSVAGELAADPAWSVRS--AAVWGLEAAARAGSRPALEVLVERVGAEANLQTQWLLVGRLQALSGMGHRVNPGAWQNWLANLPEDWTPGEAAGAGELGDDRTQAQFAGLRLLSTQLAFLIDLSGSIWNEKNG-KLPKDVAGEHLNAALDRLTEDTLFNVIPYTNTPHPWEDELVRAKRKQVENAKEEFADCRERGAGNVFDAIVLALEDERTDNLVILTDGAPSGGTRWNLNLLVPELLERNRYRSVVYDTLI 759
            A +  V G LA DP+ +VR   A  +G  A++R G+R  L  ++ER   E  L+  W +V  LQ LSG+ + ++   W++W A+L  DW P E  G     +D T A FAG+++LS +LA LID+SGS+W E +G +  K  A   +   L+ L  +TLFN+IPY+ TP PWEDELV A  + V+ A E F     RG GN +DA   ALED   D +++LTDGAP+GG RWNL+L+   L +RNRYR VV D ++
Sbjct:  217 AVNGDVLGLLALDPSAAVRLQVAEEYGRMASSR-GAR-GLARMLER---EEQLRVSWRIVEHLQGLSGLKYGLDGRPWRDWAASLEGDWEPAEE-GEERTYEDMTSA-FAGMQVLSGRLAVLIDMSGSMWEEVDGGRTRKQAADAEVRRLLESLPGETLFNLIPYSATPKPWEDELVLASPRNVKKAVEAFEGSTLRGTGNFWDAYWKALEDPLVDTVMVLTDGAPTGGERWNLSLMKSLLPQRNRYRKVVLDAIL 465          
BLAST of mRNA_M-pyrifera_M_contig89259.20686.1 vs. uniprot
Match: A0A7C7YWG3_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C7YWG3_9BACT)

HSP 1 Score: 178 bits (451), Expect = 3.270e-49
Identity = 99/247 (40.08%), Postives = 135/247 (54.66%), Query Frame = 1
Query:   25 ELAADPAWSVRSAAVWGLEAAARAGSRPALEVLVERVGAEANLQTQWLLVGRLQALSGMGHRVNPGAWQNWLANLPEDWTPGEAAGAGELGDDRTQAQFAGLRLLSTQLAFLIDLSGSIWNEK-NGKLPKDVAGEHLNAALDRLTEDTLFNVIPYTNTPHPWEDELVRAKRKQVENAKEEFADCRERGAGNVFDAIVLALEDERTDNLVILTDGAPSGGTRWNLNLLVPELLERNRYRSVVYDTLIV 762
            +L  DP   VR  A   LEA AR G R     L + +G E+N + QW +V  L+ LS      N  AWQ W   L EDW P E A   E         F GL LLS +++FL+DLSGS+W ++ +G+  K    + L  AL+ L+++  FN+IP+   P  W++ L  A  K +  A   F     +G GN +DA++LALED   D ++IL DGAPSGG RWNL L+ P     NR+R V  D L++
Sbjct:  232 DLIQDPVRVVRLRA---LEACARRGDREGARKLAQALGGESNTRLQWRIVELLRGLSQKKTGRNSRAWQEWARALAEDWQPAEIAVEPESDLGERTVAFVGLALLSERVSFLVDLSGSMWQKRADGRTRKQAVDQELRRALEGLSKEVRFNLIPFAARPDSWQESLTAASEKNISRALGFFEKSHSKGTGNYWDAMLLALEDPDLDTIMILGDGAPSGGVRWNLGLMGPLFAHANRFRGVFVDALLI 475          
BLAST of mRNA_M-pyrifera_M_contig89259.20686.1 vs. uniprot
Match: A0A7C8CUC7_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C8CUC7_9BACT)

HSP 1 Score: 175 bits (443), Expect = 5.270e-48
Identity = 93/223 (41.70%), Postives = 134/223 (60.09%), Query Frame = 1
Query:   97 GSRPALEVLVERVGAEANLQTQWLLVGRLQALSGMGHRVNPGAWQNWLANLPEDWTPGEAAGAGELGDDRTQAQFAGLRLLSTQLAFLIDLSGSIWNEKNGKLPKDVAGEHL-NAALDRLTEDTLFNVIPYTNTPHPWEDELVRAKRKQVENAKEEFADCRERGAGNVFDAIVLALEDERTDNLVILTDGAPSGGTRWNLNLLVPELLERNRYRSVVYDTLIV 762
            G+  A  +++ER+ +E   +     +  LQ LSGM +R +P  W+ W+      + P      G   +  T A  AGL L S +LA LID SGS+W E+ G+  + +  + L   +L RLTE T FN+IPYT  PHPW  ELVRA  + ++ A  +F   + RG+GNVFDA++LALED   D ++I TDGAP+GG RWN+ L+VP L +  R+R + YD ++V
Sbjct:  261 GNLAAFSLVIERLESEERTRLAARALEILQDLSGMKYRADPRPWRLWVQGQSAGFVPRRG---GATTESVTTAALAGLPLESDRLAILIDFSGSLWYEREGRPARKLQVDKLMRESLPRLTEATWFNLIPYTKEPHPWRPELVRATPRNIKAAMADFEAAKMRGSGNVFDAVLLALEDPAVDRVLIFTDGAPTGGRRWNMELIVPLLEQAARWRHIAYDAVLV 480          
BLAST of mRNA_M-pyrifera_M_contig89259.20686.1 vs. uniprot
Match: A0A518CWN4_9BACT (VWFA domain-containing protein n=1 Tax=Planctomycetes bacterium Pla163 TaxID=2528008 RepID=A0A518CWN4_9BACT)

HSP 1 Score: 174 bits (441), Expect = 1.640e-47
Identity = 90/200 (45.00%), Postives = 123/200 (61.50%), Query Frame = 1
Query:  172 VGRLQALSGMGHRVNPGAWQNWLANLPEDWTPGEA--AGAGE-LGDDRTQAQFAGLRLLSTQLAFLIDLSGSIWNEK-NGKLPKDVAGEHLNAALDRLTEDTLFNVIPYTNTPHPWEDELVRAKRKQVENAKEEFADCRERGAGNVFDAIVLALEDERTDNLVILTDGAPSGGTRWNLNLLVPELLERNRYRSVVYDTLI 759
            V  LQ  SG+  R +P  W++W   L EDW P +    G G+  GD+ T  +  GL + S +LA LID+SGS+W  + +G+  KD+    +   L+ L E   FN++PY   P P+ DELV A  K+V  A E F +  +RG GNV+DAI +AL D   D LV++TDGAP+GG  WNL L+VP LLERNR+R V +D L+
Sbjct:  305 VNALQRFSGLKFRTDPRPWRDWAEALSEDWAPEDRNLEGRGDGAGDESTVTKLVGLPIRSDRLAILIDMSGSMWQSRPDGRKTKDLVDVEVRRCLEGLPESARFNLVPYATEPGPYADELVAASPKKVAKALEWFEENEQRGKGNVWDAIEVALADPDVDTLVVMTDGAPTGGPHWNLELMVPLLLERNRFRHVTFDVLL 504          
BLAST of mRNA_M-pyrifera_M_contig89259.20686.1 vs. uniprot
Match: A0A800KK09_9BACT (Uncharacterized protein n=4 Tax=cellular organisms TaxID=131567 RepID=A0A800KK09_9BACT)

HSP 1 Score: 172 bits (435), Expect = 5.800e-47
Identity = 101/244 (41.39%), Postives = 141/244 (57.79%), Query Frame = 1
Query:   37 DPAWSVRSAAVWGLEAAARAGSRPALEVLVERVGAEANLQTQWLLVGRLQALSGMGHRVNPGAWQNWLANLPEDWTPGEAAGAGELGDDRTQAQFAGLRLLSTQLAFLIDLSGSIWNE-KNGKLPKDVAGEHLNAALDRLTEDTLFNVIPYTNTPHPWEDELVRAKRKQVENAKEEFADCRERGAGNVFDAIVLALEDERTDNLVILTDGAPSGGTRWNLNLLVPELLERN-RYRSVVYDTLIV 762
            D   +VR AA+ GL AA    S PA   L   +  E NL+ QW  V RLQALSG+ HR +   W+ W  +L E+W P +   +G    D   A F GL +LS ++ FLID+SGS+W    +G+  K++    L   L++L E T FN+IPYT  P PW+  L  A ++  + A E F   +++G  + +DA  LALED   D L++L DGAPSGG R++  LL P L+ER  R R V  D+++V
Sbjct:  225 DKILAVRVAAINGLAAAE---SAPAARALAAHLEVEENLRLQWRTVERLQALSGLAHRRDARPWKAWSEDLEENWEPEKRKDSGSASRDDKSAAFVGLPILSERVTFLIDMSGSMWMPGADGRSSKEIVDVQLRQCLEKLPETTHFNLIPYTANPIPWKKGLQPATKRNTDKALEWFESRKDQGTADFWDAFQLALEDPDVDTLIMLGDGAPSGGVRFHWRLL-PGLIEREARDRGVAVDSILV 464          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89259.20686.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D5W612_9BACT2.490e-6647.35Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A2E5X2P5_9BACT6.640e-6647.15VWFA domain-containing protein n=1 Tax=Planctomyce... [more]
A0A523PNP3_9BACT1.610e-6045.42VWFA domain-containing protein n=1 Tax=Planctomyce... [more]
A0A2D5AXR2_9BACT2.880e-5744.76Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A2D6HJL6_9BACT1.350e-5445.12Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A2D6HB36_9BACT2.450e-5144.14Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A7C7YWG3_9BACT3.270e-4940.08Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A7C8CUC7_9BACT5.270e-4841.70Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A518CWN4_9BACT1.640e-4745.00VWFA domain-containing protein n=1 Tax=Planctomyce... [more]
A0A800KK09_9BACT5.800e-4741.39Uncharacterized protein n=4 Tax=cellular organisms... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89259contigM-pyrifera_M_contig89259:46..807 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score60.5
Seed ortholog evalue1.3e-06
Seed eggNOG ortholog244447.XP_008314332.1
Preferred nameITIH2
KEGG koko:K19015
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0004857,GO:0004866,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009892,GO:0009987,GO:0010466,GO:0010605,GO:0010951,GO:0012505,GO:0019222,GO:0019538,GO:0030162,GO:0030234,GO:0030414,GO:0031323,GO:0031324,GO:0031974,GO:0032268,GO:0032269,GO:0036211,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043687,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045861,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051336,GO:0051346,GO:0052547,GO:0052548,GO:0060255,GO:0061134,GO:0061135,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0080090,GO:0098772,GO:1901564
EggNOG free text desc.Inter-alpha-trypsin inhibitor heavy chain
EggNOG OGs2QPS2@2759,38C6V@33154,3BE0X@33208,3CW49@33213,48A1Z@7711,49623@7742,4A28G@7898,COG2304@1
COG Functional cat.S
Best tax levelActinopterygii
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00536
Exons1
Model size762
Cds size762
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816802.5795314-CDS-M-pyrifera_M_contig89259:45..8071622816802.5795314-CDS-M-pyrifera_M_contig89259:45..807Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89259 46..807 +
1692278187.531002-CDS-M-pyrifera_M_contig89259:45..8071692278187.531002-CDS-M-pyrifera_M_contig89259:45..807Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89259 46..807 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89259.20686.1prot_M-pyrifera_M_contig89259.20686.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig89259 46..807 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig89259.20686.1

>prot_M-pyrifera_M_contig89259.20686.1 ID=prot_M-pyrifera_M_contig89259.20686.1|Name=mRNA_M-pyrifera_M_contig89259.20686.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=254bp
AADWSVAGELAADPAWSVRSAAVWGLEAAARAGSRPALEVLVERVGAEAN
LQTQWLLVGRLQALSGMGHRVNPGAWQNWLANLPEDWTPGEAAGAGELGD
DRTQAQFAGLRLLSTQLAFLIDLSGSIWNEKNGKLPKDVAGEHLNAALDR
LTEDTLFNVIPYTNTPHPWEDELVRAKRKQVENAKEEFADCRERGAGNVF
DAIVLALEDERTDNLVILTDGAPSGGTRWNLNLLVPELLERNRYRSVVYD
TLIV
back to top

mRNA from alignment at M-pyrifera_M_contig89259:46..807+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig89259.20686.1 ID=mRNA_M-pyrifera_M_contig89259.20686.1|Name=mRNA_M-pyrifera_M_contig89259.20686.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=762bp|location=Sequence derived from alignment at M-pyrifera_M_contig89259:46..807+ (Macrocystis pyrifera P11B4 male)
GCCGCGGACTGGAGTGTCGCCGGGGAGCTGGCGGCGGATCCCGCGTGGAG CGTGCGCTCCGCGGCGGTCTGGGGCCTCGAGGCCGCGGCGCGCGCTGGAT CGCGGCCCGCGCTCGAGGTGCTGGTCGAGCGCGTCGGTGCCGAGGCGAAC CTGCAGACGCAATGGCTCTTGGTCGGGCGACTGCAGGCGCTGTCGGGCAT GGGCCACCGGGTCAACCCGGGCGCGTGGCAGAACTGGTTGGCGAACCTGC CCGAGGACTGGACGCCCGGCGAGGCCGCGGGGGCGGGCGAGCTCGGCGAC GACCGCACCCAGGCCCAGTTCGCGGGGCTGCGCCTCTTGAGCACCCAGCT GGCCTTCCTGATCGACCTCTCGGGCTCCATCTGGAACGAGAAGAACGGCA AGCTGCCCAAGGACGTCGCGGGCGAGCACTTGAACGCCGCGCTCGACCGG CTGACCGAGGACACGCTGTTCAACGTGATCCCCTACACGAACACGCCGCA TCCCTGGGAGGACGAGCTCGTGCGCGCCAAGCGCAAGCAGGTCGAGAACG CCAAGGAGGAGTTCGCCGATTGCCGTGAGCGCGGCGCGGGCAACGTGTTC GACGCGATCGTGTTGGCTCTCGAGGACGAGCGGACCGACAACCTGGTGAT CCTGACCGACGGCGCGCCCTCGGGCGGTACGCGCTGGAACTTGAACCTCT TGGTGCCCGAGCTGCTGGAGCGCAATCGCTACCGCTCGGTGGTGTACGAC ACGCTGATCGTG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig89259:46..807+

>mRNA_M-pyrifera_M_contig89259.20686.1 ID=mRNA_M-pyrifera_M_contig89259.20686.1|Name=mRNA_M-pyrifera_M_contig89259.20686.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1524bp|location=Sequence derived from alignment at M-pyrifera_M_contig89259:46..807+ (Macrocystis pyrifera P11B4 male)
GCCGCGGACTGGAGTGTCGCCGGGGAGCTGGCGGCGGATCCCGCGTGGAG
CGTGCGCTCCGCGGCGGTCTGGGGCCTCGAGGCCGCGGCGCGCGCTGGAT
CGCGGCCCGCGCTCGAGGTGCTGGTCGAGCGCGTCGGTGCCGAGGCGAAC
CTGCAGACGCAATGGCTCTTGGTCGGGCGACTGCAGGCGCTGTCGGGCAT
GGGCCACCGGGTCAACCCGGGCGCGTGGCAGAACTGGTTGGCGAACCTGC
CCGAGGACTGGACGCCCGGCGAGGCCGCGGGGGCGGGCGAGCTCGGCGAC
GACCGCACCCAGGCCCAGTTCGCGGGGCTGCGCCTCTTGAGCACCCAGCT
GGCCTTCCTGATCGACCTCTCGGGCTCCATCTGGAACGAGAAGAACGGCA
AGCTGCCCAAGGACGTCGCGGGCGAGCACTTGAACGCCGCGCTCGACCGG
CTGACCGAGGACACGCTGTTCAACGTGATCCCCTACACGAACACGCCGCA
TCCCTGGGAGGACGAGCTCGTGCGCGCCAAGCGCAAGCAGGTCGAGAACG
CCAAGGAGGAGTTCGCCGATTGCCGTGAGCGCGGCGCGGGCAACGTGTTC
GACGCGATCGTGTTGGCTCTCGAGGACGAGCGGACCGACAACCTGGTGAT
CCTGACCGACGGCGCGCCCTCGGGCGGTACGCGCTGGAACTTGAACCTCT
TGGTGCCCGAGCTGCTGGAGCGCAATCGCTACCGCTCGGTGGTGTACGAC
ACGCTGATCGTGGCCGCGGACTGGAGTGTCGCCGGGGAGCTGGCGGCGGA
TCCCGCGTGGAGCGTGCGCTCCGCGGCGGTCTGGGGCCTCGAGGCCGCGG
CGCGCGCTGGATCGCGGCCCGCGCTCGAGGTGCTGGTCGAGCGCGTCGGT
GCCGAGGCGAACCTGCAGACGCAATGGCTCTTGGTCGGGCGACTGCAGGC
GCTGTCGGGCATGGGCCACCGGGTCAACCCGGGCGCGTGGCAGAACTGGT
TGGCGAACCTGCCCGAGGACTGGACGCCCGGCGAGGCCGCGGGGGCGGGC
GAGCTCGGCGACGACCGCACCCAGGCCCAGTTCGCGGGGCTGCGCCTCTT
GAGCACCCAGCTGGCCTTCCTGATCGACCTCTCGGGCTCCATCTGGAACG
AGAAGAACGGCAAGCTGCCCAAGGACGTCGCGGGCGAGCACTTGAACGCC
GCGCTCGACCGGCTGACCGAGGACACGCTGTTCAACGTGATCCCCTACAC
GAACACGCCGCATCCCTGGGAGGACGAGCTCGTGCGCGCCAAGCGCAAGC
AGGTCGAGAACGCCAAGGAGGAGTTCGCCGATTGCCGTGAGCGCGGCGCG
GGCAACGTGTTCGACGCGATCGTGTTGGCTCTCGAGGACGAGCGGACCGA
CAACCTGGTGATCCTGACCGACGGCGCGCCCTCGGGCGGTACGCGCTGGA
ACTTGAACCTCTTGGTGCCCGAGCTGCTGGAGCGCAATCGCTACCGCTCG
GTGGTGTACGACACGCTGATCGTG
back to top