mRNA_M-pyrifera_M_contig8925.20682.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8925.20682.1 vs. uniprot
Match: D8LDH7_ECTSI (YihA6, YihA/EngB-like GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDH7_ECTSI) HSP 1 Score: 289 bits (740), Expect = 1.960e-93 Identity = 153/197 (77.66%), Postives = 164/197 (83.25%), Query Frame = 1 Query: 34 PAPPRAREGDAQDDAVKLSNAGKNPFKKEKIVSKFDVNDIRKIEFVGSYEDDDSVWPQTNLPEIAFLGRSNVGKSSMLNTLFGESVAKVSKTPGRTRQINIFKAKNSKSKDVCYFADLPGYGYAKMSKDMQRTIEARNPIAFGIFCGGMYLARRSNLKLLVLLADSRREPLASDAGVLEYAEDRENRPYKILMVATK 624 P PR R GD QDD AG+NPFKKEKIVSKF NDIRK+EFVGSY+D + +WP+TNLPEIAFLGRSNVGKSSMLNTLFGE VAKVSKTPGRTR+INIFKAKN KDVCYFADLPGYGYAKMSKD QRTIE F G MYL RRSNLKLL+LLADSRREPLASDAGVLEYAED+E+R YKIL+VATK Sbjct: 222 PKAPRGRVGDPQDDQDGPGKAGRNPFKKEKIVSKFGANDIRKVEFVGSYDDKEEIWPRTNLPEIAFLGRSNVGKSSMLNTLFGEPVAKVSKTPGRTRKINIFKAKNGNDKDVCYFADLPGYGYAKMSKDKQRTIEK--------FLG-MYLERRSNLKLLILLADSRREPLASDAGVLEYAEDKEDRLYKILLVATK 409
BLAST of mRNA_M-pyrifera_M_contig8925.20682.1 vs. uniprot
Match: A0A836CAC1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAC1_9STRA) HSP 1 Score: 155 bits (392), Expect = 3.540e-44 Identity = 86/161 (53.42%), Postives = 113/161 (70.19%), Query Frame = 1 Query: 160 IEFVGSYEDDDSVWPQTNLPEIAFLGRSNVGKSSMLNTLFGESVAKV----SKTPGRTRQINIFKAKNSK--SKDVCYFADLPGYGYAKMSKDMQRTIEARNPIAFGIFCGGMYLARRSNLKLLVLLADSRREPLASDAGVLEYAEDRENRPYKILMVATK 624 +EF+GSY +D++ WP +PE+AFLGRSNVGKSSMLN LFGE AKV SKTPGRT+ INIF A+ ++++C FADLPGYGYAK++K+ R IE G YL RR+ LKLL+LL D+RR+ L SDA +L++A D +++L+VATK Sbjct: 1 VEFIGSYAEDENAWPSEAVPEVAFLGRSNVGKSSMLNCLFGERAAKVRFVVSKTPGRTQLINIFSARGGAGGARELCRFADLPGYGYAKLAKEDMRAIE-------GFLM--QYLERRAQLKLLILLVDARRDALDSDAEILDFAADM-GVGFRVLVVATK 151
BLAST of mRNA_M-pyrifera_M_contig8925.20682.1 vs. uniprot
Match: A0A7R9YE62_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE62_9STRA) HSP 1 Score: 120 bits (300), Expect = 8.400e-31 Identity = 68/137 (49.64%), Postives = 87/137 (63.50%), Query Frame = 1 Query: 136 FDVNDIRKIEFVGSYEDDDSVWPQTNLPEIAFLGRSNVGKSSMLNTLFG--ESVAKVSKTPGRTRQINIFKAKNSKSKDVCYFADLPGYGYAKMSKDMQRTIEARNPIAFGIFCGGMYLARRSNLKLLVLLADSRRE 540 F +++ + + F+G + D P T +PE+AF+GRSNVGKSS LN L G ++VA VSKTPGRTRQIN+F+ N K +C FADLPGYGYAK++K QRTI Y R L+L VLL DSRR+ Sbjct: 44 FSLDERKDVSFLGGFATD---LPSTEVPEVAFIGRSNVGKSSFLNALEGGNKAVAIVSKTPGRTRQINLFQVANKAGKPLCVFADLPGYGYAKLAKGRQRTISRSLR---------RYFEGRRQLQLAVLLGDSRRD 168
BLAST of mRNA_M-pyrifera_M_contig8925.20682.1 vs. uniprot
Match: A0A4D9CYN5_9STRA (EngB-type G domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYN5_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.130e-28 Identity = 78/165 (47.27%), Postives = 101/165 (61.21%), Query Frame = 1 Query: 136 FDVNDIRKIEFVGSYEDDDSVWPQTNLPEIAFLGRSNVGKSSMLNTLFG--ESVAKVSKTPGRTRQINIFKAKNSKSKDVCYFADLPGYGYAKMSKDMQRTIEARNPIAFGIFCGGMYLARRSNLKLLVLLADSRREPLASDAGVLEYAEDRENRPYKILMVATK 624 F ++DI+ + F GS+ DD P LPE+A GRSNVGKSS+LN L G + VA VSKTPGRT+QIN+FK +S V DLPGYGYAK+ K +Q I A+ YL+ R L+L VLL D+RREP SD +++Y N P +L++ATK Sbjct: 64 FSIDDIQDVTFEGSHLDD---VPFLGLPEVAVFGRSNVGKSSLLNCLAGINKKVAVVSKTPGRTQQINLFKVHDSNG-PVSVLVDLPGYGYAKLPKALQSDIGAQVR---------RYLSDRPTLRLAVLLMDARREPQKSDLNMMKYFRAA-NVP--LLVLATK 212
BLAST of mRNA_M-pyrifera_M_contig8925.20682.1 vs. uniprot
Match: UPI000D69A2CF (ribosome biogenesis GTP-binding protein YihA/YsxC n=1 Tax=Occallatibacter savannae TaxID=1002691 RepID=UPI000D69A2CF) HSP 1 Score: 114 bits (285), Expect = 2.830e-28 Identity = 72/142 (50.70%), Postives = 84/142 (59.15%), Query Frame = 1 Query: 199 WPQTNLPEIAFLGRSNVGKSSMLNTLFGESVAKVSKTPGRTRQINIFKAKNSKSKDVCYFADLPGYGYAKMSKDMQRTIEARNPIAFGIFCGGMYLARRSNLKLLVLLADSRREPLASDAGVLEYAEDRENRPYKILMVATK 624 +P ++PEIAFLGRSNVGKSS+LN L GE AKVS TPGRTR IN F+ + K + ADLPGYGYAK+SK +I A P YLA R LKL V L DS P SD +LE+ E L+VATK Sbjct: 17 FPAPSVPEIAFLGRSNVGKSSLLNALVGEKAAKVSSTPGRTRAINFFQLVDDKGRPQVVLADLPGYGYAKISK----SISAEWPKFIE-----PYLAERETLKLCVCLVDSNIPPQQSDGKLLEWLRHVER---DFLVVATK 146
BLAST of mRNA_M-pyrifera_M_contig8925.20682.1 vs. uniprot
Match: A0A2N1VMX9_9BACT (Probable GTP-binding protein EngB n=2 Tax=Bacteria TaxID=2 RepID=A0A2N1VMX9_9BACT) HSP 1 Score: 114 bits (284), Expect = 4.090e-28 Identity = 62/129 (48.06%), Postives = 88/129 (68.22%), Query Frame = 1 Query: 199 WPQTNLPEIAFLGRSNVGKSSMLNTL-FGESVAKVSKTPGRTRQINIFKAKNSKSKDVCYFADLPGYGYAKMSKDMQRTIEARNPIAFGIFCGGMYLARRSNLKLLVLLADSRREPLASDAGVLEYAED 582 +P+TNLPE+AF GRSNVGKSS++N++ +++A +S +PG+TRQIN FK +N S FADLPG+GYA++SKD++ N YLA R NLKL+V L DSR +P +D G++E+ E+ Sbjct: 18 FPKTNLPELAFSGRSNVGKSSLINSIVLQKNLALISSSPGKTRQINFFKVENKWS-----FADLPGFGYAQVSKDLREQWRKLNMD---------YLANRDNLKLIVALVDSRHDPSETDLGLIEWYEN 132
BLAST of mRNA_M-pyrifera_M_contig8925.20682.1 vs. uniprot
Match: W7U6M2_9STRA (Ribosome biogenesis gtp-binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6M2_9STRA) HSP 1 Score: 117 bits (294), Expect = 7.420e-28 Identity = 78/165 (47.27%), Postives = 101/165 (61.21%), Query Frame = 1 Query: 136 FDVNDIRKIEFVGSYEDDDSVWPQTNLPEIAFLGRSNVGKSSMLNTLFG--ESVAKVSKTPGRTRQINIFKAKNSKSKDVCYFADLPGYGYAKMSKDMQRTIEARNPIAFGIFCGGMYLARRSNLKLLVLLADSRREPLASDAGVLEYAEDRENRPYKILMVATK 624 F ++DI+ + F GS+ DD P LPE+A GRSNVGKSS+LN L G + VA VSKTPGRT+QIN+FK +S V DLPGYGYAK+ K +Q I A+ YL+ R L+L VLL D+RREP SD +++Y N P +L++ATK Sbjct: 170 FSIDDIQDVTFEGSHLDD---VPFLGLPEVAVFGRSNVGKSSLLNCLAGINKKVAVVSKTPGRTQQINLFKVHDSNG-PVSVLVDLPGYGYAKLPKALQSDIGAQVR---------RYLSDRPTLRLAVLLMDARREPQKSDLNMMKYFRAA-NIP--LLVLATK 318
BLAST of mRNA_M-pyrifera_M_contig8925.20682.1 vs. uniprot
Match: A0A482SYH7_9ARCH (Ribosome biogenesis GTP-binding protein YsxC (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SYH7_9ARCH) HSP 1 Score: 114 bits (284), Expect = 1.470e-27 Identity = 66/147 (44.90%), Postives = 92/147 (62.59%), Query Frame = 1 Query: 136 FDVNDIRKIEFVGSYEDDDSVWPQTNLPEIAFLGRSNVGKSSMLNTLFGES--VAKVSKTPGRTRQINIFKAKNSKSKDVCYFADLPGYGYAKMSKDMQRTIEARNPIAFGIFCGGMYLARRSNLKLLVLLADSRREPLASDAGVLE 570 F ++ ++ EF+GSY + D + P +PE+AF+GRSNVGKSS+LN + G S +A SK PGRT+ IN+FK K+ S D+C F DLPGYG+AK+ K+ QR I YL R+ LKL V++ D+RR SD ++E Sbjct: 104 FKLDSKKEFEFIGSYTNADQI-PIYPIPEVAFVGRSNVGKSSLLNCISGASKNIAVESKIPGRTQCINLFKCKDM-SGDICIFTDLPGYGFAKLGKEQQRDIST---------FVNKYLVGRAALKLTVVIVDARRGQQESDTSMME 239
BLAST of mRNA_M-pyrifera_M_contig8925.20682.1 vs. uniprot
Match: A0A7S2DD64_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DD64_9STRA) HSP 1 Score: 112 bits (279), Expect = 3.970e-27 Identity = 76/165 (46.06%), Postives = 102/165 (61.82%), Query Frame = 1 Query: 136 FDVNDIRKIEFVGSYEDDDSVWPQTNLPEIAFLGRSNVGKSSMLNTLFG--ESVAKVSKTPGRTRQINIFKAKNSKSKDVCYFADLPGYGYAKMSKDMQRTIEARNPIAFGIFCGGMYLARRSNLKLLVLLADSRREPLASDAGVLEYAEDRENRPYKILMVATK 624 F V + +EF G Y +D P LPEIAF+GRSNVGKSS+LN L G A VSKTPGRTR+INIF+ ++ + +C DLPGYG+A+++++++++I G F YLA RS L+L VLL DSRR + SDA + E PY ++VATK Sbjct: 68 FQVKSTKLVEFEGGYGIND--LPSIALPEIAFVGRSNVGKSSLLNCLAGPGRKPAVVSKTPGRTRRINIFRVRDDQG-PLCALVDLPGYGFAQITEEVRKSI--------GSFMD-QYLATRSELQLAVLLIDSRRGVMDSDAEMASTLEAG-GTPY--VVVATK 217
BLAST of mRNA_M-pyrifera_M_contig8925.20682.1 vs. uniprot
Match: A0A1Z5J9R8_FISSO (EngB-type G domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J9R8_FISSO) HSP 1 Score: 116 bits (290), Expect = 4.170e-27 Identity = 71/163 (43.56%), Postives = 92/163 (56.44%), Query Frame = 1 Query: 151 IRKIEFVGSYEDDDSVWPQTNLPEIAFLGRSNVGKSSMLNTLFGESV-----AKVSKTPGRTRQINIFKAKNSKSKDVCYFADLPGYGYAKMSKDMQRTIEARNPIAFGIFCGGMYLARRSNLKLLVLLADSRREPLASDAGVLEYAEDRENRPYKILMVATK 624 I ++ VGSY DD + P+ +PE+AFLGRSNVGKSS+LN L +V A+V KTPG T +N++ N K KD+ F DLPG+G+AK+SKD + +EA YL +R L L +LL D RR P D VL D I +VATK Sbjct: 105 IMGMKMVGSYLDDRQLPPRLGVPEVAFLGRSNVGKSSLLNRLTASAVQSSTKARVGKTPGATASVNLYSLYNRKEKDLLGFVDLPGFGFAKLSKDTKAAVEA---------AAENYLGKRKELMLGILLVDIRRTPSEDDRAVLAALFDM---GVPIAVVATK 255 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8925.20682.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8925.20682.1 >prot_M-pyrifera_M_contig8925.20682.1 ID=prot_M-pyrifera_M_contig8925.20682.1|Name=mRNA_M-pyrifera_M_contig8925.20682.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=208bp QERAKRREATKPAPPRAREGDAQDDAVKLSNAGKNPFKKEKIVSKFDVNDback to top mRNA from alignment at M-pyrifera_M_contig8925:149..5140+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8925.20682.1 ID=mRNA_M-pyrifera_M_contig8925.20682.1|Name=mRNA_M-pyrifera_M_contig8925.20682.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4992bp|location=Sequence derived from alignment at M-pyrifera_M_contig8925:149..5140+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8925:149..5140+ >mRNA_M-pyrifera_M_contig8925.20682.1 ID=mRNA_M-pyrifera_M_contig8925.20682.1|Name=mRNA_M-pyrifera_M_contig8925.20682.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1248bp|location=Sequence derived from alignment at M-pyrifera_M_contig8925:149..5140+ (Macrocystis pyrifera P11B4 male)back to top |