mRNA_M-pyrifera_M_contig89243.20679.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig89243.20679.1 vs. uniprot
Match: A0A3C1KRJ2_9GAMM (Fe-S cluster assembly protein SufD n=7 Tax=Halieaceae TaxID=1706372 RepID=A0A3C1KRJ2_9GAMM) HSP 1 Score: 531 bits (1368), Expect = 4.980e-188 Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 1 Query: 1 HIAWLTTGQNESISITQRLLVCLAENSSATLVESFANTATGGTAFTNGITELLLARGAQLNHYRLHLEQGDAVHIGGVHARQEADSLLNGFHLALGSALKRIDLVVDHQGSGAHCALDGLYLPRGTETVDYHTCIEHAVPHCTSQERFRGIIADEATAVFNGRIHIHPQAQKTRAELSNKNLLTSNKAEINTKPELEIYADDVQCAHGATVAQLDPLALHYLRTRGVPREEAEVMLSYGFINELVEAIAQPAVQAFLKPLLARRFARDA 807 HIAWLTTGQNESISITQRLLVCLAENSSATLVESFANTATGGTAFTNGITELLLARGAQLNHYRLHLEQGDAVHIGGVHARQEADSLLNGFHLALGSALKRIDLVVDHQGSGAHCALDGLYLPRGTETVDYHTCIEHAVPHCTSQERFRGIIADEATAVFNGRIHIHPQAQKTRAELSNKNLLTSNKAEINTKPELEIYADDVQCAHGATVAQLDPLALHYLRTRGVPREEAEVMLSYGFINELVEAIAQPAVQAFLKPLLARRFARDA Sbjct: 159 HIAWLTTGQNESISITQRLLVCLAENSSATLVESFANTATGGTAFTNGITELLLARGAQLNHYRLHLEQGDAVHIGGVHARQEADSLLNGFHLALGSALKRIDLVVDHQGSGAHCALDGLYLPRGTETVDYHTCIEHAVPHCTSQERFRGIIADEATAVFNGRIHIHPQAQKTRAELSNKNLLTSNKAEINTKPELEIYADDVQCAHGATVAQLDPLALHYLRTRGVPREEAEVMLSYGFINELVEAIAQPAVQAFLKPLLARRFARDA 427
BLAST of mRNA_M-pyrifera_M_contig89243.20679.1 vs. uniprot
Match: A0A2E7C0K8_9GAMM (Fe-S cluster assembly protein SufD n=1 Tax=Haliea sp. TaxID=1932666 RepID=A0A2E7C0K8_9GAMM) HSP 1 Score: 494 bits (1273), Expect = 1.410e-173 Identity = 245/268 (91.42%), Postives = 257/268 (95.90%), Query Frame = 1 Query: 1 HIAWLTTGQNESISITQRLLVCLAENSSATLVESFANTATGGTAFTNGITELLLARGAQLNHYRLHLEQGDAVHIGGVHARQEADSLLNGFHLALGSALKRIDLVVDHQGSGAHCALDGLYLPRGTETVDYHTCIEHAVPHCTSQERFRGIIADEATAVFNGRIHIHPQAQKTRAELSNKNLLTSNKAEINTKPELEIYADDVQCAHGATVAQLDPLALHYLRTRGVPREEAEVMLSYGFINELVEAIAQPAVQAFLKPLLARRFARD 804 HIAWLTTGQ+ESIS+TQRLLVCL ENS ATLVESFANTATGGTAFTNG+TELL+ RGAQLNHYRLHLEQGD VHIGGVHARQEADS+LNGFHLALGSALKRIDLVV+ QG GAHCA+DGLYLPRGTETVDYHTCIEHAVPHCTS+ERFRGIIADEA+AVFNGRIHIHPQAQKTRAELSNKNLLTSNKAEINTKPELEIYADDVQCAHGATVAQLDPL LHYLRTRGVPR+EAEVMLSYGFINELVEA+ Q +QAFLKPLLA RFARD Sbjct: 159 HIAWLTTGQHESISVTQRLLVCLGENSGATLVESFANTATGGTAFTNGLTELLIGRGAQLNHYRLHLEQGDVVHIGGVHARQEADSVLNGFHLALGSALKRIDLVVNQQGPGAHCAVDGLYLPRGTETVDYHTCIEHAVPHCTSRERFRGIIADEASAVFNGRIHIHPQAQKTRAELSNKNLLTSNKAEINTKPELEIYADDVQCAHGATVAQLDPLTLHYLRTRGVPRDEAEVMLSYGFINELVEAVEQAELQAFLKPLLAHRFARD 426
BLAST of mRNA_M-pyrifera_M_contig89243.20679.1 vs. uniprot
Match: A0A2N5Y1S2_9GAMM (Fe-S cluster assembly protein SufD n=1 Tax=Kineobactrum sediminis TaxID=1905677 RepID=A0A2N5Y1S2_9GAMM) HSP 1 Score: 448 bits (1152), Expect = 3.480e-155 Identity = 219/267 (82.02%), Postives = 244/267 (91.39%), Query Frame = 1 Query: 4 IAWLTTGQNESISITQRLLVCLAENSSATLVESFANTATGGTAFTNGITELLLARGAQLNHYRLHLEQGDAVHIGGVHARQEADSLLNGFHLALGSALKRIDLVVDHQGSGAHCALDGLYLPRGTETVDYHTCIEHAVPHCTSQERFRGIIADEATAVFNGRIHIHPQAQKTRAELSNKNLLTSNKAEINTKPELEIYADDVQCAHGATVAQLDPLALHYLRTRGVPREEAEVMLSYGFINELVEAIAQPAVQAFLKPLLARRFARD 804 I WLT+GQ+ +IS+ QRLLV L NS AT+VE+FAN TGGT FTNGITELL+ RGA+LNHYRLHLEQG+AVHIGGVHAR + DSLLNGFH+ALGSALKRID+VVDHQGSG HC LDG+YLPR E VDYHTCIEH+VPHC+S+ERFRGIIADEATA+FNGRIHIHPQAQKTRAELSNKNLLTSNKAE+NTKPELEIYADDVQCAHGATVAQLDP L+YLRTRG+ +EEAEVMLSYGFINELVEAIA+P +Q +LKPLLARRF+RD Sbjct: 160 IVWLTSGQSGAISMNQRLLVSLQANSQATVVETFANATTGGTPFTNGITELLVGRGARLNHYRLHLEQGNAVHIGGVHARLDQDSLLNGFHIALGSALKRIDVVVDHQGSGGHCELDGIYLPRDREIVDYHTCIEHSVPHCSSRERFRGIIADEATAIFNGRIHIHPQAQKTRAELSNKNLLTSNKAEVNTKPELEIYADDVQCAHGATVAQLDPSTLYYLRTRGISKEEAEVMLSYGFINELVEAIAEPGLQDYLKPLLARRFSRD 426
BLAST of mRNA_M-pyrifera_M_contig89243.20679.1 vs. uniprot
Match: A0A6C0U481_9GAMM (Fe-S cluster assembly protein SufD n=1 Tax=Kineobactrum salinum TaxID=2708301 RepID=A0A6C0U481_9GAMM) HSP 1 Score: 447 bits (1151), Expect = 4.940e-155 Identity = 222/266 (83.46%), Postives = 240/266 (90.23%), Query Frame = 1 Query: 1 HIAWLTTGQNESISITQRLLVCLAENSSATLVESFANTATGGTAFTNGITELLLARGAQLNHYRLHLEQGDAVHIGGVHARQEADSLLNGFHLALGSALKRIDLVVDHQGSGAHCALDGLYLPRGTETVDYHTCIEHAVPHCTSQERFRGIIADEATAVFNGRIHIHPQAQKTRAELSNKNLLTSNKAEINTKPELEIYADDVQCAHGATVAQLDPLALHYLRTRGVPREEAEVMLSYGFINELVEAIAQPAVQAFLKPLLARRFA 798 H+ WLTTGQ + IS+TQRLLVCL NS A+L ESFAN ATGGTAFTNGITELLL RG+ L+HYRLHLEQG AVHIGGVHAR DS+L+GFHLALGSALKRIDLVVDHQG+GAHC LDG+YLPRG E VDYHTC+EH+V HC+S+ERFRGIIADEATAVFNGRIHIHPQAQKTRAELSN NLLTSNKAEINTKPELEIYADDVQCAHGATVAQLDP LHYLRTRG+PREEAEVMLSYGFINELVE + Q V+ +LKPLLARRFA Sbjct: 159 HVVWLTTGQTQPISVTQRLLVCLGPNSEASLTESFANIATGGTAFTNGITELLLERGSHLSHYRLHLEQGAAVHIGGVHARLGQDSVLSGFHLALGSALKRIDLVVDHQGTGAHCDLDGIYLPRGQEIVDYHTCMEHSVAHCSSRERFRGIIADEATAVFNGRIHIHPQAQKTRAELSNNNLLTSNKAEINTKPELEIYADDVQCAHGATVAQLDPHTLHYLRTRGIPREEAEVMLSYGFINELVENLTQTVVRDWLKPLLARRFA 424
BLAST of mRNA_M-pyrifera_M_contig89243.20679.1 vs. uniprot
Match: UPI0019D3919C (Fe-S cluster assembly protein SufD n=1 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI0019D3919C) HSP 1 Score: 431 bits (1107), Expect = 2.730e-148 Identity = 211/268 (78.73%), Postives = 240/268 (89.55%), Query Frame = 1 Query: 1 HIAWLTTGQNESISITQRLLVCLAENSSATLVESFANTATGGTAFTNGITELLLARGAQLNHYRLHLEQGDAVHIGGVHARQEADSLLNGFHLALGSALKRIDLVVDHQGSGAHCALDGLYLPRGTETVDYHTCIEHAVPHCTSQERFRGIIADEATAVFNGRIHIHPQAQKTRAELSNKNLLTSNKAEINTKPELEIYADDVQCAHGATVAQLDPLALHYLRTRGVPREEAEVMLSYGFINELVEAIAQPAVQAFLKPLLARRFARD 804 H+ WLT+GQ +++S+TQRLLV + NS AT+VESFANTATGGTAFTNGI+ELLLA GA+L+H RLHLEQG+AVHIGGVHA A++ LNGFHLALGS LKRIDLVV+H+G GAHC L+G+YLPRG E VDYHTCIEHAVPHCTS E FRGII D A+A+FNGRIHIHPQAQKTRAELSNKNLLTS++AE+NTKPELEIYADDVQCAHGATVAQ+DP LHYLRTRGVPR+EAEVMLSYGFINELVE++ AV FLKP+LARRFAR+ Sbjct: 158 HLVWLTSGQVDALSVTQRLLVRMGANSQATVVESFANTATGGTAFTNGISELLLADGARLDHCRLHLEQGEAVHIGGVHATLAANATLNGFHLALGSRLKRIDLVVEHRGQGAHCELNGIYLPRGEEQVDYHTCIEHAVPHCTSNETFRGIIGDSASAIFNGRIHIHPQAQKTRAELSNKNLLTSHQAEVNTKPELEIYADDVQCAHGATVAQMDPATLHYLRTRGVPRDEAEVMLSYGFINELVESVHCAAVHDFLKPMLARRFARN 425
BLAST of mRNA_M-pyrifera_M_contig89243.20679.1 vs. uniprot
Match: A0A5C9A067_9GAMM (Fe-S cluster assembly protein SufD n=1 Tax=Parahaliea maris TaxID=2716870 RepID=A0A5C9A067_9GAMM) HSP 1 Score: 426 bits (1094), Expect = 3.040e-146 Identity = 208/268 (77.61%), Postives = 235/268 (87.69%), Query Frame = 1 Query: 1 HIAWLTTGQNESISITQRLLVCLAENSSATLVESFANTATGGTAFTNGITELLLARGAQLNHYRLHLEQGDAVHIGGVHARQEADSLLNGFHLALGSALKRIDLVVDHQGSGAHCALDGLYLPRGTETVDYHTCIEHAVPHCTSQERFRGIIADEATAVFNGRIHIHPQAQKTRAELSNKNLLTSNKAEINTKPELEIYADDVQCAHGATVAQLDPLALHYLRTRGVPREEAEVMLSYGFINELVEAIAQPAVQAFLKPLLARRFARD 804 H+ WLT+GQ +++S+ QRLLV L NS A++VESFANT TGGTAFTNGITELLL GAQLNHYRL LEQG+AVHIGGVHA A+S LN FHLALGS LKR+DLV +H+G GAHC L+G+YLPRG E VDYHTCIEHAVPHCTS E FRGII DEATA+FNGRIHIHP AQKTRAELSNKNLLTSN+AE+NTKPELEIYADDVQCAHGATVAQ+DP +LHYLRTRGVP++EAEVMLSYGFINELV+ I ++ FLKP+LARRFAR+ Sbjct: 158 HLVWLTSGQVDALSVNQRLLVQLGANSQASVVESFANTDTGGTAFTNGITELLLGDGAQLNHYRLQLEQGEAVHIGGVHAALAANSTLNSFHLALGSRLKRVDLVAEHRGQGAHCELNGIYLPRGEEQVDYHTCIEHAVPHCTSSETFRGIIGDEATAIFNGRIHIHPDAQKTRAELSNKNLLTSNRAEVNTKPELEIYADDVQCAHGATVAQMDPASLHYLRTRGVPKDEAEVMLSYGFINELVDGIRCEDLRNFLKPMLARRFARN 425
BLAST of mRNA_M-pyrifera_M_contig89243.20679.1 vs. uniprot
Match: UPI000E2E83EE (Fe-S cluster assembly protein SufD n=1 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI000E2E83EE) HSP 1 Score: 420 bits (1080), Expect = 4.790e-144 Identity = 201/268 (75.00%), Postives = 236/268 (88.06%), Query Frame = 1 Query: 1 HIAWLTTGQNESISITQRLLVCLAENSSATLVESFANTATGGTAFTNGITELLLARGAQLNHYRLHLEQGDAVHIGGVHARQEADSLLNGFHLALGSALKRIDLVVDHQGSGAHCALDGLYLPRGTETVDYHTCIEHAVPHCTSQERFRGIIADEATAVFNGRIHIHPQAQKTRAELSNKNLLTSNKAEINTKPELEIYADDVQCAHGATVAQLDPLALHYLRTRGVPREEAEVMLSYGFINELVEAIAQPAVQAFLKPLLARRFARD 804 H+ WLT+GQ E++S+ QRLLV L NS A++VE+F+N TGGTAFTNGI+ELLL GA+L+HYRL LEQG++ HIGGVHA +A+S LN FHLALGS LKRIDLVV+H+G GAHC L+G+YLPRG E VDYHTCIEHAVPHCTS E FRGI++DEA A+FNGRIHIHP AQKTRAELSNKNLLTSN+AE+NTKPELEIYADDVQCAHGATVAQ+DPL LHYLRTRGVP++EAEVM+SYGFINELV+ + A++ +LKPLLARRFAR+ Sbjct: 158 HLVWLTSGQMEAVSVNQRLLVQLGANSQASVVETFSNANTGGTAFTNGISELLLGEGARLDHYRLQLEQGESAHIGGVHAAIDANSTLNSFHLALGSRLKRIDLVVEHRGQGAHCELNGIYLPRGEEQVDYHTCIEHAVPHCTSSETFRGIVSDEACAIFNGRIHIHPNAQKTRAELSNKNLLTSNRAEVNTKPELEIYADDVQCAHGATVAQMDPLTLHYLRTRGVPKDEAEVMISYGFINELVDGVRNKALRDYLKPLLARRFARN 425
BLAST of mRNA_M-pyrifera_M_contig89243.20679.1 vs. uniprot
Match: A0A2D5FCM8_9GAMM (Fe-S cluster assembly protein SufD n=1 Tax=Haliea sp. TaxID=1932666 RepID=A0A2D5FCM8_9GAMM) HSP 1 Score: 419 bits (1076), Expect = 1.210e-143 Identity = 206/267 (77.15%), Postives = 237/267 (88.76%), Query Frame = 1 Query: 4 IAWLTTGQNESISITQRLLVCLAENSSATLVESFANTATGGTAFTNGITELLLARGAQLNHYRLHLEQGDAVHIGGVHARQEADSLLNGFHLALGSALKRIDLVVDHQGSGAHCALDGLYLPRGTETVDYHTCIEHAVPHCTSQERFRGIIADEATAVFNGRIHIHPQAQKTRAELSNKNLLTSNKAEINTKPELEIYADDVQCAHGATVAQLDPLALHYLRTRGVPREEAEVMLSYGFINELVEAIAQPAVQAFLKPLLARRFARD 804 I WLT+G + +++++QRLLV +S ATLVE+FA++ TG TAFTNG++ELLL GA+L H RLHLEQ +AVHIGGVH RQ A+S L GFHLALGS LKRIDLVVDHQG+GAHC LDG+YLPRG+ETVDYHTCIEH+VPHCTS+ERFRGI+ DEA+A+FNGRIHIHPQAQKTRAELSNKNLLTS+KAE+NTKPELEIYADDVQCAHGATVAQLDP+ HYLRTRGVPREEAEVMLSYGFINELVE + AV+ F+KPLLA RFAR+ Sbjct: 160 IVWLTSGADAALALSQRLLVNCGAHSEATLVETFASSDTGATAFTNGVSELLLGEGARLQHCRLHLEQDNAVHIGGVHIRQSANSQLYGFHLALGSDLKRIDLVVDHQGAGAHCELDGIYLPRGSETVDYHTCIEHSVPHCTSRERFRGIVGDEASAIFNGRIHIHPQAQKTRAELSNKNLLTSHKAEVNTKPELEIYADDVQCAHGATVAQLDPMTRHYLRTRGVPREEAEVMLSYGFINELVEDLPCAAVRDFVKPLLASRFARN 426
BLAST of mRNA_M-pyrifera_M_contig89243.20679.1 vs. uniprot
Match: A0A5C9A3D3_9GAMM (Fe-S cluster assembly protein SufD n=1 Tax=Parahaliea aestuarii TaxID=1852021 RepID=A0A5C9A3D3_9GAMM) HSP 1 Score: 417 bits (1073), Expect = 4.680e-143 Identity = 202/268 (75.37%), Postives = 231/268 (86.19%), Query Frame = 1 Query: 1 HIAWLTTGQNESISITQRLLVCLAENSSATLVESFANTATGGTAFTNGITELLLARGAQLNHYRLHLEQGDAVHIGGVHARQEADSLLNGFHLALGSALKRIDLVVDHQGSGAHCALDGLYLPRGTETVDYHTCIEHAVPHCTSQERFRGIIADEATAVFNGRIHIHPQAQKTRAELSNKNLLTSNKAEINTKPELEIYADDVQCAHGATVAQLDPLALHYLRTRGVPREEAEVMLSYGFINELVEAIAQPAVQAFLKPLLARRFARD 804 H+ WLT+GQ E++S+ QRLLV L NS A++VE+F N TGGTAFTNGI+ELLL GA+L+HYRLHLEQG+A HIGGVHA +S LN FHLALGS LKRIDLV +H+G GAHC L+G+YLPRG E VDYHTCIEHAVPHCTS E FRGII DEATA+FNGRIHIHP AQKT AELSNKNLLTSN+AE+NTKPELEIYADDVQCAHGATVAQ+DPL LHYLRTRGVP++EAEVM+SYGFINELV+ + ++ FLKPLLARRFAR+ Sbjct: 158 HLVWLTSGQGEAVSVNQRLLVQLGANSQASVVETFCNANTGGTAFTNGISELLLGDGARLDHYRLHLEQGEAAHIGGVHAALAGNSTLNSFHLALGSRLKRIDLVAEHRGQGAHCELNGIYLPRGEEQVDYHTCIEHAVPHCTSSETFRGIIGDEATAIFNGRIHIHPDAQKTCAELSNKNLLTSNRAEVNTKPELEIYADDVQCAHGATVAQMDPLTLHYLRTRGVPKDEAEVMISYGFINELVDGVRCEPLRDFLKPLLARRFARN 425
BLAST of mRNA_M-pyrifera_M_contig89243.20679.1 vs. uniprot
Match: A0A7W2TWT0_9GAMM (Fe-S cluster assembly protein SufD n=1 Tax=Sediminihaliea albiluteola TaxID=2758564 RepID=A0A7W2TWT0_9GAMM) HSP 1 Score: 409 bits (1050), Expect = 1.040e-139 Identity = 200/268 (74.63%), Postives = 232/268 (86.57%), Query Frame = 1 Query: 1 HIAWLTTGQNESISITQRLLVCLAENSSATLVESFANTATGGTAFTNGITELLLARGAQLNHYRLHLEQGDAVHIGGVHARQEADSLLNGFHLALGSALKRIDLVVDHQGSGAHCALDGLYLPRGTETVDYHTCIEHAVPHCTSQERFRGIIADEATAVFNGRIHIHPQAQKTRAELSNKNLLTSNKAEINTKPELEIYADDVQCAHGATVAQLDPLALHYLRTRGVPREEAEVMLSYGFINELVEAIAQPAVQAFLKPLLARRFARD 804 H+ WL++GQ +++S+ QRLLV L NS AT+VESFANTATGGTAFTNGI+EL L GA L+HYRLHLEQ +AVHIGGVHA A S LN FHLALGS LKRID+VV+H+G GAHC ++G+YLPRG E VDYHTC+EHAVP+CTS E FRGIIAD+A+AVFNGRIHIHP AQKTRAELSNKNLLTSN+AE+NTKPELEIYADDVQCAHGATVAQ+DP LHYLR RG+ + EAEVMLS+GFINELVEAI A++ +LKPLLARRF+ + Sbjct: 158 HLVWLSSGQVDALSVNQRLLVELGANSKATVVESFANTATGGTAFTNGISELQLGDGAILDHYRLHLEQAEAVHIGGVHATLNASSTLNSFHLALGSTLKRIDIVVEHRGQGAHCEVNGIYLPRGEEQVDYHTCMEHAVPNCTSSETFRGIIADQASAVFNGRIHIHPDAQKTRAELSNKNLLTSNQAEVNTKPELEIYADDVQCAHGATVAQMDPATLHYLRARGISKAEAEVMLSFGFINELVEAIRCEAIRDYLKPLLARRFSHN 425 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89243.20679.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig89243.20679.1 >prot_M-pyrifera_M_contig89243.20679.1 ID=prot_M-pyrifera_M_contig89243.20679.1|Name=mRNA_M-pyrifera_M_contig89243.20679.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=269bp HIAWLTTGQNESISITQRLLVCLAENSSATLVESFANTATGGTAFTNGITback to top mRNA from alignment at M-pyrifera_M_contig89243:2..808+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig89243.20679.1 ID=mRNA_M-pyrifera_M_contig89243.20679.1|Name=mRNA_M-pyrifera_M_contig89243.20679.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=807bp|location=Sequence derived from alignment at M-pyrifera_M_contig89243:2..808+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig89243:2..808+ >mRNA_M-pyrifera_M_contig89243.20679.1 ID=mRNA_M-pyrifera_M_contig89243.20679.1|Name=mRNA_M-pyrifera_M_contig89243.20679.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1614bp|location=Sequence derived from alignment at M-pyrifera_M_contig89243:2..808+ (Macrocystis pyrifera P11B4 male)back to top |