mRNA_M-pyrifera_M_contig89131.20666.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig89131.20666.1 vs. uniprot
Match: A0A836CDZ2_9STRA (40S ribosomal protein S6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDZ2_9STRA) HSP 1 Score: 239 bits (610), Expect = 1.330e-76 Identity = 134/211 (63.51%), Postives = 162/211 (76.78%), Query Frame = 1 Query: 1 YDKRMSEEVPGELLGSGFEGYVFRIAGGNDKQGFPMMQGVLVSHRVRLLLSKGMTYYRPRRKGERKRKSVRGCIVGPDLSVVQLVLVKKGDGEVPGLTDEVVPARLGPKRANKVRKYFDLPEDADPRDFTVKRIVERKGGKTVVKKPKVQRLITPRRLQHKAKRQAARKAKLEESKAAALEYKHLLEQRAQE----RRASAAARKSSRKGS 621 YDKR+S+EV GE LG F GYVFRI+GGNDKQGFPM QGVL +HRVRLLLSKG++ YRPRRKGERKRKSVRGCIVG DL+V+ LV+VKKG+GEVPGLTD VP RLGPKRANK+RK F+L ++ D R + + R E+KG KTV K+PK+QRLITP +LQ +R + +K +SKA A EY L QR +E RR+ + R+SSRK S Sbjct: 28 YDKRISQEVEGEALGEEFSGYVFRISGGNDKQGFPMKQGVLCNHRVRLLLSKGLSCYRPRRKGERKRKSVRGCIVGSDLAVLNLVIVKKGEGEVPGLTDVTVPRRLGPKRANKIRKLFNLSKEDDVRKYVIARKFEKKG-KTVTKRPKIQRLITPAKLQRTRRRASLKKQAQVKSKADAAEYGRLYAQRMKEAKEARRSIISKRRSSRKAS 237
BLAST of mRNA_M-pyrifera_M_contig89131.20666.1 vs. uniprot
Match: A0A5A8CKC7_CAFRO (40S ribosomal protein S6 n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CKC7_CAFRO) HSP 1 Score: 238 bits (607), Expect = 3.020e-76 Identity = 133/211 (63.03%), Postives = 165/211 (78.20%), Query Frame = 1 Query: 1 YDKRMSEEVPGELLGSGFEGYVFRIAGGNDKQGFPMMQGVLVSHRVRLLLSKGMTYYRPRRKGERKRKSVRGCIVGPDLSVVQLVLVKKGDGEVPGLTDE--VVPARLGPKRANKVRKYFDLPEDADPRDFTVKRIVERKGGKTVVKKPKVQRLITPRRLQHKAKRQAARKAKLEESKAAALEYKHLLEQRAQERRASAAARKSSRKGSRA 627 YDKR+S+EV G+ LG FE ++FRIAGGNDKQGFPMMQGVL RVRLL+SKGMTYYRPRR GERKRKSVRGCI+GPD+SV+QLV+VK G E PGLTDE V P RLGPKRAN +RK F+L + D+ +KR V RKG +TV K PK+QRL+TPRR+ K + QA++ A E++++ A EY+ L++ RA ERR SAAAR+SSR+ +A Sbjct: 28 YDKRISQEVDGKALGDEFEDFIFRIAGGNDKQGFPMMQGVLRGERVRLLMSKGMTYYRPRRAGERKRKSVRGCIIGPDISVIQLVVVKAGK-EFPGLTDEASVRPRRLGPKRANNIRKLFNLSPEDKVEDYVIKRDVTRKG-RTVTKSPKIQRLVTPRRVMRKQQYQASKVAAREKARSEAAEYEALIKARADERRESAAARRSSRRSGKA 236
BLAST of mRNA_M-pyrifera_M_contig89131.20666.1 vs. uniprot
Match: W7TEA2_9STRA (40S ribosomal protein S6 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TEA2_9STRA) HSP 1 Score: 238 bits (607), Expect = 3.670e-76 Identity = 131/210 (62.38%), Postives = 159/210 (75.71%), Query Frame = 1 Query: 1 YDKRMSEEVPGELLGSGFEGYVFRIAGGNDKQGFPMMQGVLVSHRVRLLLSKGMTYYRPRRKGERKRKSVRGCIVGPDLSVVQLVLVKKGDGEVPGLTDEVVPARLGPKRANKVRKYFDLPEDADPRDFTVKRIVERKGGKTVVKKPKVQRLITPRRLQHKAKRQAARKAKLEESKAAALEYKHLLEQRAQERRASAAARKSSRKGSRAA 630 YD+R+S+EV GE +G F+GYVF+I+GGNDKQGFPM QGVL RVRLLL KG++ YR RRKGERKRKSVRG IVGPDLSV+ LVLVK+G+ +V GLTD VP RLGPKRAN +RK F+L +DAD + V+R E K GKTVVKKPK+QRLITP RLQHK +R A+KA ++KA A EY + +QR ER+ S + S R+ SR A Sbjct: 28 YDRRISQEVDGEHIGDEFKGYVFKISGGNDKQGFPMKQGVLTDQRVRLLLRKGLSCYRARRKGERKRKSVRGAIVGPDLSVLNLVLVKRGEEDVVGLTDSAVPRRLGPKRANNIRKLFNLSKDADVTTYPVERKFENKKGKTVVKKPKIQRLITPLRLQHKRRRLEAKKAATTKAKAEAAEYHRIFQQRLNERKESRRSAISKRRSSRRA 237
BLAST of mRNA_M-pyrifera_M_contig89131.20666.1 vs. uniprot
Match: A0A2T0FFS7_9ASCO (40S ribosomal protein S6 n=1 Tax=Wickerhamiella sorbophila TaxID=45607 RepID=A0A2T0FFS7_9ASCO) HSP 1 Score: 229 bits (585), Expect = 6.790e-73 Identity = 122/207 (58.94%), Postives = 152/207 (73.43%), Query Frame = 1 Query: 1 YDKRMSEEVPGELLGSGFEGYVFRIAGGNDKQGFPMMQGVLVSHRVRLLLSKGMTYYRPRRKGERKRKSVRGCIVGPDLSVVQLVLVKKGDGEVPGLTDEVVPARLGPKRANKVRKYFDLPEDADPRDFTVKRIVERKGGKTVVKKPKVQRLITPRRLQHKAKRQAARKAKLEESKAAALEYKHLLEQRAQERRASAAARKSSRKGS 621 YDKRM +E+ G+ LG F+GY F+I GGNDKQGFPM QGVL RVRLL+ KG + YRPRR GERKRKSVRGCIVGPD++V+ LV++K+GD E+ GLTD VP RLGPKRAN +RK+F L ++ D R F ++R V K GKT K PK+QRLITPRRLQHK + +AA+ A +++SK A EY LL +R E++A A K R S Sbjct: 28 YDKRMGQEIEGDSLGDEFKGYTFKITGGNDKQGFPMKQGVLHPTRVRLLMDKGHSCYRPRRAGERKRKSVRGCIVGPDMAVLSLVVLKQGDAEIEGLTDTSVPKRLGPKRANNIRKFFGLSKEDDVRQFVIRREVTGKNGKTYTKAPKIQRLITPRRLQHKRRHRAAKLAAVQKSKDEAAEYAQLLAKRVSEKKAEKAEIKKRRASS 234
BLAST of mRNA_M-pyrifera_M_contig89131.20666.1 vs. uniprot
Match: A0A1X2HUT5_SYNRA (40S ribosomal protein S6 n=2 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HUT5_SYNRA) HSP 1 Score: 227 bits (579), Expect = 8.100e-72 Identity = 119/206 (57.77%), Postives = 159/206 (77.18%), Query Frame = 1 Query: 4 DKRMSEEVPGELLGSGFEGYVFRIAGGNDKQGFPMMQGVLVSHRVRLLLSKGMTYYRPRRKGERKRKSVRGCIVGPDLSVVQLVLVKKGDGEVPGLTDEVVPARLGPKRANKVRKYFDLPEDADPRDFTVKRIVERK--GGKTVVKKPKVQRLITPRRLQHKAKRQAARKAKLEESKAAALEYKHLLEQRAQERRASAAARKSSRK 615 DKRMS++V G+ LG F+GYVFRI+GGNDKQGFPM QGVLV HRVRLL+ KG + YRPRR GERKRKSVRGCIV DL+V+ LV+VKKG+ ++PGLTD+ VP RLGPKRA+K+R++F+L ++ D R + ++R V+ K G K K PK+QRL+TPR LQH+ +R A ++ + E S+ A EYK +L +RA+E + + A RK+ R+ Sbjct: 29 DKRMSQQVAGDSLGDEFKGYVFRISGGNDKQGFPMKQGVLVPHRVRLLMGKGHSCYRPRRTGERKRKSVRGCIVSSDLAVMSLVVVKKGEQDIPGLTDKTVPKRLGPKRASKIRRFFNLSKEDDVRKYVIRREVQPKKEGAKPYTKAPKIQRLVTPRTLQHRRQRVAIKRRRAEASREAEAEYKQILAKRAKEAKQAQAQRKADRR 234
BLAST of mRNA_M-pyrifera_M_contig89131.20666.1 vs. uniprot
Match: D8QGN2_SCHCM (40S ribosomal protein S6 n=2 Tax=Schizophyllaceae TaxID=5332 RepID=D8QGN2_SCHCM) HSP 1 Score: 226 bits (576), Expect = 1.970e-71 Identity = 119/208 (57.21%), Postives = 157/208 (75.48%), Query Frame = 1 Query: 1 YDKRMSEEVPGELLGSGFEGYVFRIAGGNDKQGFPMMQGVLVSHRVRLLLSKGMTYYRPRRKGERKRKSVRGCIVGPDLSVVQLVLVKKGDGEVPGLTDEVVPARLGPKRANKVRKYFDLPEDADPRDFTVKRIVE---RKGGKTVVKKPKVQRLITPRRLQHKAKRQAARKAKLEESKAAALEYKHLLEQRAQERRASAAARKSSRK 615 YDK+MS+EVPG+ LG F+GYVFRI GGNDKQGFPM QGVL+ HRVRLLLS+G + YRPRR+GERKRKSVRGCIVGPD++V+ LV+VK+GD E+PGLTD+V+P RLGPKRA K+R+ F+L +D D R + V+R V+ ++ K K PK+QRL+TP RLQ + ++ ++ +LE K E+ LL +R E++A AA K+ K Sbjct: 28 YDKKMSQEVPGDSLGDEFKGYVFRITGGNDKQGFPMKQGVLLPHRVRLLLSEGHSCYRPRREGERKRKSVRGCIVGPDIAVLSLVIVKQGDAEIPGLTDQVLPKRLGPKRATKIRRMFNLTKDDDVRKYVVRREVKSGKKENAKPYTKAPKIQRLVTPMRLQRRRHLRSVKRRRLERQKEQKTEFDALLAKRVAEKKAKVAAIKAHHK 235
BLAST of mRNA_M-pyrifera_M_contig89131.20666.1 vs. uniprot
Match: S2JM63_MUCC1 (40S ribosomal protein S6 n=12 Tax=Mucorales TaxID=4827 RepID=S2JM63_MUCC1) HSP 1 Score: 225 bits (574), Expect = 3.590e-71 Identity = 119/194 (61.34%), Postives = 150/194 (77.32%), Query Frame = 1 Query: 1 YDKRMSEEVPGELLGSGFEGYVFRIAGGNDKQGFPMMQGVLVSHRVRLLLSKGMTYYRPRRKGERKRKSVRGCIVGPDLSVVQLVLVKKGDGEVPGLTDEVVPARLGPKRANKVRKYFDLPEDADPRDFTVKRIVERK--GGKTVVKKPKVQRLITPRRLQHKAKRQAARKAKLEESKAAALEYKHLLEQRAQE 576 YDKRM++EV G+ LG F+GYVFRI+GGNDKQGFPM QGVL+ HRVRLLLSKG + YRPRR GERKRKSVRGCIVG DLSV+ LV+VK+G+ ++PGLTD VP RLGPKRA+K+RK+F+L ++ D R + ++R V+ K G K K PK+QRL+TP LQ K RQA ++ + E S+ A EYK LL +R +E Sbjct: 28 YDKRMAQEVSGDSLGDEFKGYVFRISGGNDKQGFPMKQGVLLPHRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVGSDLSVLSLVVVKQGEQDIPGLTDTTVPKRLGPKRASKIRKFFNLSKEDDVRKYVIRREVQPKAEGKKAYTKAPKIQRLVTPLTLQRKRHRQALKRRRAEASREAESEYKQLLAKRVKE 221
BLAST of mRNA_M-pyrifera_M_contig89131.20666.1 vs. uniprot
Match: A0A8H7ZRT1_9FUNG (40S ribosomal protein S6 n=1 Tax=Olpidium bornovanus TaxID=278681 RepID=A0A8H7ZRT1_9FUNG) HSP 1 Score: 225 bits (573), Expect = 4.200e-71 Identity = 117/196 (59.69%), Postives = 150/196 (76.53%), Query Frame = 1 Query: 1 YDKRMSEEVPGELLGSGFEGYVFRIAGGNDKQGFPMMQGVLVSHRVRLLLSKGMTYYRPRRKGERKRKSVRGCIVGPDLSVVQLVLVKKGDGEVPGLTDEVVPARLGPKRANKVRKYFDLPEDADPRDFTVKRIVERKGG--KTVVKKPKVQRLITPRRLQHKAKRQAARKAKLEESKAAALEYKHLLEQRAQERR 582 YDKRMS+EVPG+ +G F+GY+FRI GGNDKQGFPM QGVLV HRVRLLLSKG + YRPRR GERKRKSVRGCIVGPDLSV+ LV+VK+G+ ++PG+TD +P RLGPKRA+K+RK F+L + D R + ++R V+ K K K PK+QRL+TPR LQ K +A ++ +E SK AA +Y LL +R +E++ Sbjct: 16 YDKRMSQEVPGDSVGDEFKGYIFRITGGNDKQGFPMKQGVLVPHRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVGPDLSVISLVIVKQGEQDIPGVTDTAIPKRLGPKRASKIRKMFNLSKKDDVRKYVIRREVQPKNPDRKPYTKAPKIQRLVTPRTLQRKRHLKAVKRRAIEASKEAAADYAKLLAKRLKEKK 211
BLAST of mRNA_M-pyrifera_M_contig89131.20666.1 vs. uniprot
Match: A0A261Y1S5_9FUNG (40S ribosomal protein S6 n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y1S5_9FUNG) HSP 1 Score: 226 bits (576), Expect = 4.620e-71 Identity = 120/194 (61.86%), Postives = 148/194 (76.29%), Query Frame = 1 Query: 1 YDKRMSEEVPGELLGSGFEGYVFRIAGGNDKQGFPMMQGVLVSHRVRLLLSKGMTYYRPRRKGERKRKSVRGCIVGPDLSVVQLVLVKKGDGEVPGLTDEVVPARLGPKRANKVRKYFDLPEDADPRDFTVKRIVERKGG--KTVVKKPKVQRLITPRRLQHKAKRQAARKAKLEESKAAALEYKHLLEQRAQE 576 YDKRMS EVPG+ +G F+GYVFRI GGNDKQGFPM QGVL+ HRVRLLLS+G + YRPRR GERKRKSVRGCIVGPDL+V+ LV+VK+G+ ++PGLTD VP RLGPKRAN +RK+F+L ++ D R F ++R V+ K K K PK+QRLITP RLQ K + A++ + E SK AA EY LL +R +E Sbjct: 54 YDKRMSAEVPGDSVGDEFKGYVFRITGGNDKQGFPMKQGVLLPHRVRLLLSEGHSCYRPRRAGERKRKSVRGCIVGPDLAVLSLVIVKQGENDIPGLTDSAVPKRLGPKRANHIRKFFNLSKEDDVRKFVIRREVKPKNPEKKPYTKAPKIQRLITPARLQRKRQNILAKRRRAEASKEAAAEYSALLAKRVKE 247
BLAST of mRNA_M-pyrifera_M_contig89131.20666.1 vs. uniprot
Match: A0A4P9Z6W8_9FUNG (40S ribosomal protein S6-B (Fragment) n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9Z6W8_9FUNG) HSP 1 Score: 225 bits (573), Expect = 5.430e-71 Identity = 119/206 (57.77%), Postives = 152/206 (73.79%), Query Frame = 1 Query: 1 YDKRMSEEVPGELLGSGFEGYVFRIAGGNDKQGFPMMQGVLVSHRVRLLLSKGMTYYRPRRKGERKRKSVRGCIVGPDLSVVQLVLVKKGDGEVPGLTDEVVPARLGPKRANKVRKYFDLPEDADPRDFTVKRIVERKGG--KTVVKKPKVQRLITPRRLQHKAKRQAARKAKLEESKAAALEYKHLLEQRAQERRASAAARKSSR 612 YDKR+S EVPG+ +G F+GYVFRI GGNDKQGFPM QGVL+ HRVRLLLSKG + YRPRR GERKRKSVRGCI GPD++V+ L +VK+GD ++PGLTD+V+P RLGPKRAN +RK F+L +D D R + ++R V+ K K K PK+QRL+TP LQ K R A + + + SK AA EY+ LL R +E+R + R+ +R Sbjct: 26 YDKRISTEVPGDSIGDEFKGYVFRITGGNDKQGFPMKQGVLLPHRVRLLLSKGHSCYRPRRTGERKRKSVRGCIAGPDMAVISLTVVKQGDNDIPGLTDQVLPKRLGPKRANNIRKLFNLTKDDDVRKYVIRREVQPKNAEKKPYTKAPKIQRLVTPLTLQRKRHRMALKARRAQASKEAAAEYQKLLHLRMKEKRQAIHKRREAR 231 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89131.20666.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig89131.20666.1 >prot_M-pyrifera_M_contig89131.20666.1 ID=prot_M-pyrifera_M_contig89131.20666.1|Name=mRNA_M-pyrifera_M_contig89131.20666.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=209bp MSEEVPGELLGSGFEGYVFRIAGGNDKQGFPMMQGVLVSHRVRLLLSKGMback to top mRNA from alignment at M-pyrifera_M_contig89131:172..810- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig89131.20666.1 ID=mRNA_M-pyrifera_M_contig89131.20666.1|Name=mRNA_M-pyrifera_M_contig89131.20666.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=639bp|location=Sequence derived from alignment at M-pyrifera_M_contig89131:172..810- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig89131:172..810- >mRNA_M-pyrifera_M_contig89131.20666.1 ID=mRNA_M-pyrifera_M_contig89131.20666.1|Name=mRNA_M-pyrifera_M_contig89131.20666.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1254bp|location=Sequence derived from alignment at M-pyrifera_M_contig89131:172..810- (Macrocystis pyrifera P11B4 male)back to top |