mRNA_M-pyrifera_M_contig89114.20661.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig89114.20661.1
Unique NamemRNA_M-pyrifera_M_contig89114.20661.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig89114.20661.1 vs. uniprot
Match: A0A0C9RRB6_9HYME (Ankfy1 protein (Fragment) n=1 Tax=Fopius arisanus TaxID=64838 RepID=A0A0C9RRB6_9HYME)

HSP 1 Score: 61.2 bits (147), Expect = 6.370e-8
Identity = 44/143 (30.77%), Postives = 70/143 (48.95%), Query Frame = 1
Query:   31 NNTPLHIAASNLNLDACEMLLAMEV--EVDVHAVNSSGMNALCLLASARDVHKVSRQGDRYLEVLNQCSELGAGIDCRTPDGDSALHLAVLHNNLPGIYYLLDHGAFIDSTNLQLQTPLYLSVHKRYWHIAEVLLKHDADPTI 453
            N TPLH+A SNL+ D  E+LL      +V ++  N  G   L L      +    ++G + + VL      GA I+     G + LH A+L  +     +LL++GA +++   + + PL LSVH R   + E L +   D +I
Sbjct:  284 NETPLHLAVSNLHFDVVEVLLKSSTNSKVQLNKKNIEGETPLGLA-----IKTPLKRGRKIVTVLINA---GANINEVNEKGLNLLHQAILKEDSATAIFLLENGADMNAKTPEGENPLQLSVHCRLGEVVEALCRRGVDTSI 418          
BLAST of mRNA_M-pyrifera_M_contig89114.20661.1 vs. uniprot
Match: UPI0005ACA9DD (rabankyrin-5 n=1 Tax=Fopius arisanus TaxID=64838 RepID=UPI0005ACA9DD)

HSP 1 Score: 61.2 bits (147), Expect = 6.560e-8
Identity = 44/143 (30.77%), Postives = 70/143 (48.95%), Query Frame = 1
Query:   31 NNTPLHIAASNLNLDACEMLLAMEV--EVDVHAVNSSGMNALCLLASARDVHKVSRQGDRYLEVLNQCSELGAGIDCRTPDGDSALHLAVLHNNLPGIYYLLDHGAFIDSTNLQLQTPLYLSVHKRYWHIAEVLLKHDADPTI 453
            N TPLH+A SNL+ D  E+LL      +V ++  N  G   L L      +    ++G + + VL      GA I+     G + LH A+L  +     +LL++GA +++   + + PL LSVH R   + E L +   D +I
Sbjct:  514 NETPLHLAVSNLHFDVVEVLLKSSTNSKVQLNKKNIEGETPLGLA-----IKTPLKRGRKIVTVLINA---GANINEVNEKGLNLLHQAILKEDSATAIFLLENGADMNAKTPEGENPLQLSVHCRLGEVVEALCRRGVDTSI 648          
BLAST of mRNA_M-pyrifera_M_contig89114.20661.1 vs. uniprot
Match: A0A0B7N294_9FUNG (Uncharacterized protein n=1 Tax=Parasitella parasitica TaxID=35722 RepID=A0A0B7N294_9FUNG)

HSP 1 Score: 57.0 bits (136), Expect = 1.570e-6
Identity = 45/156 (28.85%), Postives = 77/156 (49.36%), Query Frame = 1
Query:   22 DHQNNTPLHIAASNLNLDACEMLLAMEVEVDVHAVNSSGMNALCLLASARDVHKVSRQGDRYLEVLNQCSELGAGIDCRTPDGDSALHLAVLHNNLPGIYYLLDHGAFIDSTNLQLQTPLYLSVHKRYWHIAEVLLKH-DADPTIQNSKKSSAVSL 486
            D Q+NT LH+AA+N    A  +L++ +V +  H++N  G++ L +  S             YL       + GA ++ +T  G + LH AV  N L  +  L++    ++  N   +TPLYL+V +R   I   L++   ADP   ++  S+  +L
Sbjct:  164 DEQDNTLLHLAATNDFTAAIPLLISKKVPI--HSLNQRGLSPLAIAISFG-----------YLNAALALIDGGADVNGKTRFG-TVLHHAVTWNRLEIVKKLVESHCNVNVVNAMEETPLYLAVQQRKIDIVMYLIEEAKADPCYMSNNPSNTTNL 305          
BLAST of mRNA_M-pyrifera_M_contig89114.20661.1 vs. uniprot
Match: A0A0G0AP85_TRIHA (Uncharacterized protein n=1 Tax=Trichoderma harzianum TaxID=5544 RepID=A0A0G0AP85_TRIHA)

HSP 1 Score: 57.0 bits (136), Expect = 1.970e-6
Identity = 48/151 (31.79%), Postives = 69/151 (45.70%), Query Frame = 1
Query:   31 NNTPLHIAASNLNLDACEMLLAMEVEVDVHAVNSSGMNALCLLASARDVHKVSRQGDRYLEVLNQCSELGAGIDCRTPDGDSALHLAVLHNNLPGIYYLLDHGAFIDSTNLQLQT-PLYLSVHKRYWHIAEVLLKHDADPTIQNSKKSSAV 480
            ++TPL +AA    LD+ ++L+A    V     N +   A+ L  +A   H  S   D  L         GA ID +     ++L  A L  N      LL H  F D   L L   PL ++V K ++ IAE LL+H ADP +Q     +A+
Sbjct:  822 DDTPLQVAARYSRLDSAKLLIAAGASV---TPNDNRELAMPLEIAAS--HGSSEMTDLLLSH-------GAPIDAKGLSNQTSLETACLAGNFAAAESLLRHRDFHDYITLDLPVQPLMIAVQKGHYKIAEALLRHGADPDLQEQGGQTAL 960          
BLAST of mRNA_M-pyrifera_M_contig89114.20661.1 vs. uniprot
Match: UPI000D736FD0 (uncharacterized protein LOC112559061 isoform X3 n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D736FD0)

HSP 1 Score: 56.2 bits (134), Expect = 3.380e-6
Identity = 40/127 (31.50%), Postives = 64/127 (50.39%), Query Frame = 1
Query:   13 DEKDHQNNTPLHIAASNLNLDACEMLLAMEVEVDVHAVNSSGMNAL---CLLASARDVHKVSRQGDRYLEVLNQCSELGAGIDCRTPDGDSALHLAVLHNNLPGIYYLLDHGAFIDSTNLQLQTPLY 384
            DEKD   +T + +AA N NLD   +LL  +   D++ ++SSG   L    L   +  +H V    D+ +++           +CR PDG++ALHLA    N   +  LL++GA   S + Q  + L+
Sbjct:  348 DEKDDFGDTLIQVAARNKNLDIVNILL--DAVEDINMIDSSGFTILHRAVLCNPSVSLHIVKTLIDKEVDI-----------ECRCPDGNTALHLAANSRNWTVVQMLLENGADASSADNQGMSVLH 461          
BLAST of mRNA_M-pyrifera_M_contig89114.20661.1 vs. uniprot
Match: UPI000D72F5D1 (uncharacterized protein LOC112559061 isoform X1 n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D72F5D1)

HSP 1 Score: 56.2 bits (134), Expect = 3.490e-6
Identity = 40/127 (31.50%), Postives = 64/127 (50.39%), Query Frame = 1
Query:   13 DEKDHQNNTPLHIAASNLNLDACEMLLAMEVEVDVHAVNSSGMNAL---CLLASARDVHKVSRQGDRYLEVLNQCSELGAGIDCRTPDGDSALHLAVLHNNLPGIYYLLDHGAFIDSTNLQLQTPLY 384
            DEKD   +T + +AA N NLD   +LL  +   D++ ++SSG   L    L   +  +H V    D+ +++           +CR PDG++ALHLA    N   +  LL++GA   S + Q  + L+
Sbjct:  348 DEKDDFGDTLIQVAARNKNLDIVNILL--DAVEDINMIDSSGFTILHRAVLCNPSVSLHIVKTLIDKEVDI-----------ECRCPDGNTALHLAANSRNWTVVQMLLENGADASSADNQGMSVLH 461          
BLAST of mRNA_M-pyrifera_M_contig89114.20661.1 vs. uniprot
Match: A0A0C3AGZ7_9AGAM (Palmitoyltransferase (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AGZ7_9AGAM)

HSP 1 Score: 55.1 bits (131), Expect = 8.340e-6
Identity = 44/155 (28.39%), Postives = 64/155 (41.29%), Query Frame = 1
Query:   16 EKDHQNNTPLHIAASNLNLDACEMLLAMEVEVDVHAVNSSGMNALCLLASARDVHKVSRQGDRYLEVLNQCSELGAGIDCRTPDGDSALHLAVLHNNLPGIYYLLDHGAFIDSTNLQLQTPLYLSVHKRYWHIAEVLLKHDADPTIQNSKKSSAV 480
            E+D QN +PLH AA N NL  C  LL    EVDV          L                       N    L      +   G  +L L    +++  + Y+L     I+S +LQ  TPL  + ++      ++LLKH ADP +Q+ K  +A+
Sbjct:   27 ERDPQNISPLHWAAINANLPICRYLLEQGAEVDVVG------GELAATXXXXXXXXXXXXXXXXXXAHNADPTL------KDSQGYDSLQLTTHSSSVMSLLYMLQQPVSINSRDLQGHTPLMWAAYQGDAIPVDILLKHQADPLLQDEKGMTAL 169          
BLAST of mRNA_M-pyrifera_M_contig89114.20661.1 vs. uniprot
Match: A0A0W0YAN3_9GAMM (Ankyrin repeat protein n=5 Tax=Legionella santicrucis TaxID=45074 RepID=A0A0W0YAN3_9GAMM)

HSP 1 Score: 54.3 bits (129), Expect = 1.620e-5
Identity = 36/144 (25.00%), Postives = 73/144 (50.69%), Query Frame = 1
Query:   19 KDHQNNTPLHIAASNLNLDACEMLLAMEVEVDVHAVNSSGMNALCLLASA---RDVHKVSRQGDRYLEVLNQCSELGAGIDCRTPDGDSALHLAVLHNNLPGIYYLLDHGAFIDSTNLQLQTPLYLSVHKRYWHIAEVLLKHDA 441
            ++ +  + LH+A  + + ++   L+A  + V++   +  G  AL         +D ++V R      ++ +Q     A +D +  D ++ L +AV HN+L  + YLL HGA +++ +  ++T L+ +  + Y  I + LLK  A
Sbjct:  585 RNKKGQSALHLATLDADKESLSKLIARGINVNIQ--DKDGSTALIHALETVLYKDKNEVGR------DIAHQLIAAQAQVDIKDDDENTPLIIAVQHNDLAMVNYLLQHGACLETFDGDMKTALFWAAEEGYEDIFDALLKRGA 720          
BLAST of mRNA_M-pyrifera_M_contig89114.20661.1 vs. uniprot
Match: W7TML1_9STRA (Ankyrin repeat protein (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TML1_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 2.710e-5
Identity = 25/56 (44.64%), Postives = 37/56 (66.07%), Query Frame = 1
Query:  235 LGAGIDCRTPDGD--SALHLAVLHNNLPGIYYLLDHGAFIDSTNLQLQTPLYLSVH 396
            L  G D    D D  +A+H+A LHN++P +  LLDHGA +D+ N +  TPL+L++H
Sbjct:   66 LSRGADVHAVDSDMRTAMHVASLHNHVPFLDLLLDHGANVDAPNREGMTPLFLAIH 121          
BLAST of mRNA_M-pyrifera_M_contig89114.20661.1 vs. uniprot
Match: UPI0009E3261B (transient receptor potential cation channel subfamily A member 1-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E3261B)

HSP 1 Score: 53.5 bits (127), Expect = 3.000e-5
Identity = 47/171 (27.49%), Postives = 78/171 (45.61%), Query Frame = 1
Query:    4 CADDEKDHQNNTPLHIAASNLNLDACEMLLAMEV------EVDVHAVNSSGMNA------LC--LLASARDVHKVSRQGDRYL------------EVLNQCSELGAGIDCRTPDGDSALHLAVLHNNLPGIYYLLDHGAFIDSTNLQLQTPLYLSVHKRYWHIAEVLLKHD 438
            C  +E+D   NTP+HIAA+N +LD  ++L           E D + + +  M A       C  LL+   DV      G   L            EVL  C  L + ++ +    ++ LH+A  HN L  + +LLD GA + + N +  T L +++      +A+ L++H+
Sbjct:  470 CELNERDGNENTPIHIAATNGSLDCLKVLSRFPCFSFLLDERDEYGMTALHMAAGNKHANTCDFLLSKGSDVTNADANGCTALHLAVKAGSLKTVEVLLGCL-LQSTLEQKDTGDNTPLHVACRHNRLDVLKFLLDKGADVTARNNRNMTCLDVAIEWEVGEVAKTLIRHE 639          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89114.20661.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A0C9RRB6_9HYME6.370e-830.77Ankfy1 protein (Fragment) n=1 Tax=Fopius arisanus ... [more]
UPI0005ACA9DD6.560e-830.77rabankyrin-5 n=1 Tax=Fopius arisanus TaxID=64838 R... [more]
A0A0B7N294_9FUNG1.570e-628.85Uncharacterized protein n=1 Tax=Parasitella parasi... [more]
A0A0G0AP85_TRIHA1.970e-631.79Uncharacterized protein n=1 Tax=Trichoderma harzia... [more]
UPI000D736FD03.380e-631.50uncharacterized protein LOC112559061 isoform X3 n=... [more]
UPI000D72F5D13.490e-631.50uncharacterized protein LOC112559061 isoform X1 n=... [more]
A0A0C3AGZ7_9AGAM8.340e-628.39Palmitoyltransferase (Fragment) n=1 Tax=Serendipit... [more]
A0A0W0YAN3_9GAMM1.620e-525.00Ankyrin repeat protein n=5 Tax=Legionella santicru... [more]
W7TML1_9STRA2.710e-544.64Ankyrin repeat protein (Fragment) n=2 Tax=Nannochl... [more]
UPI0009E3261B3.000e-527.49transient receptor potential cation channel subfam... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89114contigM-pyrifera_M_contig89114:45..530 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score72.4
Seed ortholog evalue2.2e-10
Seed eggNOG ortholog400682.PAC_15720712
Preferred nameANKFY1
KEGG koko:K10575,ko:K20129
KEGG Pathwayko04120,ko04141,ko05012,map04120,map04141,map05012
Hectar predicted targeting categoryother localisation
GOsGO:0000902,GO:0000904,GO:0002064,GO:0003382,GO:0003674,GO:0005488,GO:0005515,GO:0005543,GO:0005545,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005773,GO:0006810,GO:0006892,GO:0006896,GO:0006897,GO:0006906,GO:0006996,GO:0007034,GO:0007041,GO:0007275,GO:0008150,GO:0008289,GO:0009653,GO:0009790,GO:0009888,GO:0009987,GO:0010008,GO:0012505,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016482,GO:0017016,GO:0017137,GO:0019899,GO:0030100,GO:0030154,GO:0030855,GO:0031090,GO:0031267,GO:0031410,GO:0031982,GO:0032501,GO:0032502,GO:0032879,GO:0032989,GO:0034058,GO:0035091,GO:0042147,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044352,GO:0044354,GO:0044422,GO:0044424,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0045807,GO:0046907,GO:0048193,GO:0048284,GO:0048468,GO:0048518,GO:0048522,GO:0048548,GO:0048549,GO:0048598,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0051020,GO:0051049,GO:0051050,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0060429,GO:0060627,GO:0061024,GO:0061025,GO:0065007,GO:0071840,GO:0090160,GO:0090174,GO:0097708,GO:0098588,GO:0098657,GO:0098805,GO:1901981
EggNOG free text desc.positive regulation of pinocytosis
EggNOG OGs38BKV@33154,3BAAK@33208,COG0666@1,KOG0504@2759,KOG4591@1,KOG4591@2759
EC2.3.2.23
COG Functional cat.KLT
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04121,ko04131
Exons1
Model size486
Cds size486
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816801.4693396-CDS-M-pyrifera_M_contig89114:44..5301622816801.4693396-CDS-M-pyrifera_M_contig89114:44..530Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89114 45..530 +
1692278186.8422718-CDS-M-pyrifera_M_contig89114:44..5301692278186.8422718-CDS-M-pyrifera_M_contig89114:44..530Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89114 45..530 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89114.20661.1prot_M-pyrifera_M_contig89114.20661.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig89114 45..530 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig89114.20661.1

>prot_M-pyrifera_M_contig89114.20661.1 ID=prot_M-pyrifera_M_contig89114.20661.1|Name=mRNA_M-pyrifera_M_contig89114.20661.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=162bp
YCADDEKDHQNNTPLHIAASNLNLDACEMLLAMEVEVDVHAVNSSGMNAL
CLLASARDVHKVSRQGDRYLEVLNQCSELGAGIDCRTPDGDSALHLAVLH
NNLPGIYYLLDHGAFIDSTNLQLQTPLYLSVHKRYWHIAEVLLKHDADPT
IQNSKKSSAVSL
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mRNA from alignment at M-pyrifera_M_contig89114:45..530+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig89114.20661.1 ID=mRNA_M-pyrifera_M_contig89114.20661.1|Name=mRNA_M-pyrifera_M_contig89114.20661.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=486bp|location=Sequence derived from alignment at M-pyrifera_M_contig89114:45..530+ (Macrocystis pyrifera P11B4 male)
TACTGTGCTGACGACGAGAAGGACCACCAGAACAACACTCCGCTGCACAT TGCTGCGAGCAACTTGAATTTGGATGCGTGTGAGATGCTCCTTGCCATGG AGGTGGAAGTGGATGTACACGCGGTCAACAGCTCGGGCATGAATGCCCTG TGCCTTCTAGCTAGTGCCAGAGACGTGCACAAGGTGTCCCGCCAAGGAGA CCGCTATCTGGAGGTGCTCAACCAGTGCTCTGAGCTCGGCGCGGGCATCG ACTGCCGCACGCCAGACGGGGACTCGGCGCTGCACCTGGCGGTGCTGCAC AACAACCTGCCAGGCATCTACTACCTGCTGGACCACGGCGCTTTCATCGA CTCGACCAATCTGCAGCTGCAGACGCCGCTGTATCTCTCGGTCCACAAGC GGTACTGGCACATTGCCGAGGTGCTGCTGAAGCATGACGCCGACCCAACC ATCCAGAACAGCAAGAAGAGTTCTGCAGTATCCTTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig89114:45..530+

>mRNA_M-pyrifera_M_contig89114.20661.1 ID=mRNA_M-pyrifera_M_contig89114.20661.1|Name=mRNA_M-pyrifera_M_contig89114.20661.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=972bp|location=Sequence derived from alignment at M-pyrifera_M_contig89114:45..530+ (Macrocystis pyrifera P11B4 male)
TACTGTGCTGACGACGAGAAGGACCACCAGAACAACACTCCGCTGCACAT
TGCTGCGAGCAACTTGAATTTGGATGCGTGTGAGATGCTCCTTGCCATGG
AGGTGGAAGTGGATGTACACGCGGTCAACAGCTCGGGCATGAATGCCCTG
TGCCTTCTAGCTAGTGCCAGAGACGTGCACAAGGTGTCCCGCCAAGGAGA
CCGCTATCTGGAGGTGCTCAACCAGTGCTCTGAGCTCGGCGCGGGCATCG
ACTGCCGCACGCCAGACGGGGACTCGGCGCTGCACCTGGCGGTGCTGCAC
AACAACCTGCCAGGCATCTACTACCTGCTGGACCACGGCGCTTTCATCGA
CTCGACCAATCTGCAGCTGCAGACGCCGCTGTATCTCTCGGTCCACAAGC
GGTACTGGCACATTGCCGAGGTGCTGCTGAAGCATGACGCCGACCCAACC
ATCCAGAACAGCAAGAAGAGTTCTGCAGTATCCTTGTACTGTGCTGACGA
CGAGAAGGACCACCAGAACAACACTCCGCTGCACATTGCTGCGAGCAACT
TGAATTTGGATGCGTGTGAGATGCTCCTTGCCATGGAGGTGGAAGTGGAT
GTACACGCGGTCAACAGCTCGGGCATGAATGCCCTGTGCCTTCTAGCTAG
TGCCAGAGACGTGCACAAGGTGTCCCGCCAAGGAGACCGCTATCTGGAGG
TGCTCAACCAGTGCTCTGAGCTCGGCGCGGGCATCGACTGCCGCACGCCA
GACGGGGACTCGGCGCTGCACCTGGCGGTGCTGCACAACAACCTGCCAGG
CATCTACTACCTGCTGGACCACGGCGCTTTCATCGACTCGACCAATCTGC
AGCTGCAGACGCCGCTGTATCTCTCGGTCCACAAGCGGTACTGGCACATT
GCCGAGGTGCTGCTGAAGCATGACGCCGACCCAACCATCCAGAACAGCAA
GAAGAGTTCTGCAGTATCCTTG
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