mRNA_M-pyrifera_M_contig89112.20659.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig89112.20659.1 vs. uniprot
Match: A0A2P6N9A6_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N9A6_9EUKA) HSP 1 Score: 149 bits (375), Expect = 4.790e-38 Identity = 81/199 (40.70%), Postives = 119/199 (59.80%), Query Frame = 1 Query: 1 GLKKEGVDDVVEASIAQYLAG---DQDQDELQKELMETFVRYQEYYQARPKLIEGILLGKRITSVSAGYCFTVAIDSQGQAFSWGFNDKGQLGLGHRFNQEEPRHVKALAGEFVTSLSCGSSHTVVITKRS-LFSWGMGVFGQLGHGSAKDSLLPLHVVGFERQDDNRVMSVSCGTHHSMALSEAGPEPPGAQGDPAQH 585 GL+K+ +++ S+AQYL+G + ++E+ L F + Y Q P + GIL ++I +VSAGY +T+A D QG FSWGFN+KGQLGLGHRFNQE P+ V L G + +CG HT +++ L++ G+GVFGQLGHG +DSLLP V+ ++ ++ G+ +MA+S G G+ QH Sbjct: 219 GLRKQ---QIIDRSVAQYLSGSGNELSEEEMMTSLNNNFGNFVPYNQTVPMYVGGILSKRKIINVSAGYAYTIAADDQGNVFSWGFNEKGQLGLGHRFNQENPQQVTQLDGVRIVKTACGMQHTAMLSDEGHLYTCGLGVFGQLGHGEPRDSLLP-RVIETLSSAGEKIKDIALGSFFTMAISTNGKAWSWGHGEYGQH 413
BLAST of mRNA_M-pyrifera_M_contig89112.20659.1 vs. uniprot
Match: L8H3C1_ACACA (Regulator of chromosome condensation (RCC1) repeat domain containing protein (Fragment) n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H3C1_ACACA) HSP 1 Score: 127 bits (320), Expect = 1.240e-30 Identity = 68/190 (35.79%), Postives = 114/190 (60.00%), Query Frame = 1 Query: 1 GLKKEGVDDVVEASIAQYLAGDQDQDELQK-ELMETFVRYQEYYQARPKLIEGILLGKRITSVSAGYCFTVAIDSQGQAFSWGFNDKGQLGLGHRFNQEEPRHVKALAGEFVTSLSCGSSHTVVITKRS-LFSWGMGVFGQLGHGSAKDSLLPLHVVGFERQDDN------RVMSVSCGTHHSMALSEAG 546 GL + + +V S + Y A +EL++ ++ F + Y Q P+++ G L ++ V+AGY F++A+ SQG+ +SWGFN+K QLGLGHR+NQ P+ V L G + S +CG H+V+++ ++++G+GVFGQLGHG + D P V ++ R++ ++CG+HH++AL +G Sbjct: 131 GLNSDRMKRMVGRSHSTYYAAGATGEELEELSRVQNFGSFTPYTQPSPEVVTG-LQHVKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQLGLGHRYNQSVPQLVPHLQGVHIVSATCGQQHSVLLSAAGHVYTFGLGVFGQLGHGVSSDERFPRRVEALVPAEEGVESAGERIVQIACGSHHTLALGVSG 319
BLAST of mRNA_M-pyrifera_M_contig89112.20659.1 vs. uniprot
Match: F0ZGI8_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZGI8_DICPU) HSP 1 Score: 118 bits (295), Expect = 2.750e-27 Identity = 65/193 (33.68%), Postives = 105/193 (54.40%), Query Frame = 1 Query: 1 GLKKEGVDDVVEASIAQYLAGDQD--------------QDELQKELMETFVRYQEYYQARPKLIEGILLGKRITSVSAGYCFTVAIDSQGQAFSWGFNDKGQLGLGHRFNQEEPRHVKALAGEFVTSLSCGSSHTVVITKRS-LFSWGMGVFGQLGHGSAKDSLLPLHVVGFERQDDNRVMSVSCGTHHSMAL 534 G+ K ++E S++QYL G+++ ++ + + +Y Q P ++G+L + + +SAG+ F+ A+ G+ F+WGFN+KGQLGL HR+ P+ VK L + S+SCG H +T+ L++WG+GVFGQLGH + K L P V F + +V VSCG++ +M L Sbjct: 135 GMSKPKYQSIIENSVSQYLNGEKEIYDSTSGNXXXXXXASTSEQSKGKHIGKIIDYNQTTPIQVQGLLANEEVIDISAGWAFSAAVTKSGKIFTWGFNEKGQLGLKHRWFNSSPQLVKTLLDVKIVSVSCGRQHIGAVTEDGDLYTWGLGVFGQLGHSNVKSYLHPKKVAAFSL-NGIQVSQVSCGSNFTMVL 326
BLAST of mRNA_M-pyrifera_M_contig89112.20659.1 vs. uniprot
Match: D3B5Y6_POLPP (Regulator of chromosome condensation domain-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B5Y6_POLPP) HSP 1 Score: 117 bits (293), Expect = 5.160e-27 Identity = 56/140 (40.00%), Postives = 90/140 (64.29%), Query Frame = 1 Query: 130 QARPKLIEGILLGKRITSVSAGYCFTVAIDSQGQAFSWGFNDKGQLGLGHRFNQEEPRHVKALAGEFVTSLSCGSSHTVVITKRS-LFSWGMGVFGQLGHGSAKDSLLPLHVVGFERQDDNRVMSVSCGTHHSMALSEAG 546 Q P L++ +I +SAG+ ++ A+ S G ++WGFN+KGQLGLG R+ PR +++L+ + + +++CG H I+K L++WG+GVFGQLGHG K L P V+ FE+Q +++ V+ G + +MA+SE G Sbjct: 217 QMTPVLVDFGSKSIKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGDRWYHGNPRVIRSLSNKSIVNIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKLKSLLHPKKVLYFEQQQ-KKIVQVATGANFTMAVSENG 355
BLAST of mRNA_M-pyrifera_M_contig89112.20659.1 vs. uniprot
Match: F4PQK6_CAVFA (Regulator of chromosome condensation domain-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PQK6_CAVFA) HSP 1 Score: 116 bits (291), Expect = 9.650e-27 Identity = 57/137 (41.61%), Postives = 85/137 (62.04%), Query Frame = 1 Query: 145 LIEGILLGKRITSVSAGYCFTVAIDSQGQAFSWGFNDKGQLGLGHRFNQEEPRHVKALAGEFVTSLSCGSSHTVVITKRS-LFSWGMGVFGQLGHGSAKDSLLPLHVVGFERQD--DNRVMSVSCGTHHSMALSEAG 546 L+ G + +++ +SAG+ ++ A+ G+ F+WGFN+KGQLGLG R+ P+ VK + S+SCG H VI+ + LF+WG+GVFGQLGHG K L P V+ F D + +V V+CG + +MAL+ G Sbjct: 219 LLVGSIKNQQVVDMSAGWAYSAAVTKSGKVFTWGFNEKGQLGLGDRWFHGLPQQVKFFTNVHIVSVSCGRQHIGVISDQGDLFTWGLGVFGQLGHGKLKSCLHPKKVLAFSEADQLNQKVRQVACGANFTMALTVDG 355
BLAST of mRNA_M-pyrifera_M_contig89112.20659.1 vs. uniprot
Match: UPI000644D611 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644D611) HSP 1 Score: 115 bits (287), Expect = 3.270e-26 Identity = 57/142 (40.14%), Postives = 83/142 (58.45%), Query Frame = 1 Query: 130 QARPKLIEGILLGK--RITSVSAGYCFTVAIDSQGQAFSWGFNDKGQLGLGHRFNQEEPRHVKALAGEFVTSLSCGSSHTVVITKRS-LFSWGMGVFGQLGHGSAKDSLLPLHVVGFERQDDNRVMSVSCGTHHSMALSEAG 546 Q P+L++ GK RI +SAG+ + A+ + G F+WGFN+KGQLGLG R+ P+ V+ L + + +SCG H + K L++WG+GVFGQLGHG K LLP V+ F V V+CG + +M ++ G Sbjct: 205 QLTPQLVD---FGKNIRIVDISAGWAYNAAVSANGNVFTWGFNEKGQLGLGDRWFYGSPQLVRGLPRDSIAQVSCGRQHIAAVAKNGELYTWGLGVFGQLGHGKLKSLLLPKKVMAFTEPTPIPVKQVACGANFTMVVTTTG 343
BLAST of mRNA_M-pyrifera_M_contig89112.20659.1 vs. uniprot
Match: A0A152A077_9MYCE (Regulator of chromosome condensation domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A077_9MYCE) HSP 1 Score: 109 bits (273), Expect = 2.470e-24 Identity = 51/118 (43.22%), Postives = 75/118 (63.56%), Query Frame = 1 Query: 121 EYYQARPKLIEGILLGKRITSVSAGYCFTVAIDSQGQAFSWGFNDKGQLGLGHRFNQEEPRHVKALAGEFVTSLSCGSSHTVVITKRSL-FSWGMGVFGQLGHGSAKDSLLPLHVVGF 471 ++ Q P+LI G+L + I +SAG+ ++ + G+ F+WGFN+KGQLGLG R+ P++V AL V S+SCG H +T+ L +SWG+G+FGQLGHG K L P+ + F Sbjct: 202 DHIQQTPQLIAGVLEDEEIIDISAGWAYSAVVTRSGKVFTWGFNEKGQLGLGDRWFHGSPQYVHALKDVKVVSVSCGRQHMCAVTENGLVYSWGLGIFGQLGHGKLKSYLHPVLIKHF 319
BLAST of mRNA_M-pyrifera_M_contig89112.20659.1 vs. uniprot
Match: A0A8J4UZH1_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4UZH1_9MYCE) HSP 1 Score: 108 bits (271), Expect = 4.520e-24 Identity = 54/130 (41.54%), Postives = 78/130 (60.00%), Query Frame = 1 Query: 160 LLGKRITSVSAGYCFTVAIDSQGQAFSWGFNDKGQLGLGHRFNQEEPRHVKALAGEFVTSLSCGSSHTVVITKRS-LFSWGMGVFGQLGHGSAKDSLLPLHVVGFERQDDNRVMSVSCGTHHSMALSEAG 546 L K+I +SAG+ ++ A+ S+G+ ++WGFN+KGQLGLG R+ P+ V L+ + S+SCG H I+ LF+WG+GVFGQLGHG K L P V F + ++CG + SM S+ G Sbjct: 215 LKNKQIVDISAGWAYSAAVTSEGELYTWGFNEKGQLGLGDRWFHGLPQLVSILSPFRIVSVSCGRQHIGAISAEGELFTWGLGVFGQLGHGKLKSYLHPKKVNAFVEPTFVPIAQIACGANFSMVRSQGG 344
BLAST of mRNA_M-pyrifera_M_contig89112.20659.1 vs. uniprot
Match: A0A7S3SWQ5_EMIHU (Hypothetical protein (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SWQ5_EMIHU) HSP 1 Score: 102 bits (254), Expect = 4.550e-24 Identity = 59/140 (42.14%), Postives = 88/140 (62.86%), Query Frame = 1 Query: 130 QARPKLIEGILLGKRITSVSAGYCFTVAIDSQGQAFSWGFNDKGQLGLGHRFNQEEPRHVKALAGEFVTSLSCGSSHTVVITKR-SLFSWGMGVFGQLGHGSAKDSLLPLHVVGFERQDDNRVMSVSCGTHHSMALSEAG 546 Q +P IEG L G+R+ +V+AG ++A+ + G +SWG D G+LG G R Q P+ V+ALAG+ V ++S G H++ +T +++SWG G G+LGHG ++ LLP V F Q RV++VS G HS+AL+ G Sbjct: 19 QLQPTKIEG-LAGQRVVAVAAGLRHSLALTADGAVWSWGNGDSGELGHGDRQTQLLPKKVEALAGQRVIAVSAGGYHSLALTSDGAVWSWGDGGQGRLGHGDWQNQLLPKKVEAFAGQ---RVVAVSAGGQHSLALTAGG 154
BLAST of mRNA_M-pyrifera_M_contig89112.20659.1 vs. uniprot
Match: Q8MP76_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q8MP76_DICDI) HSP 1 Score: 108 bits (271), Expect = 4.550e-24 Identity = 65/192 (33.85%), Postives = 105/192 (54.69%), Query Frame = 1 Query: 28 VVEASIAQYLAG--------------DQDQDELQKELMETFVRYQ----EYYQARPKLIEGILLGKRITSVSAGYCFTVAIDSQGQAFSWGFNDKGQLGLGHRFNQEEPRHVKALAGEFVTSLSCGSSHTVVITKRS-LFSWGMGVFGQLGHGSAKDSLLPLHVVGFERQDDNRVMSVSCGTHHSMALSEAG 546 ++EAS++QYL+G D D+D+ ++ ++ + Q P I+ I + + VS G+ F+ A+ G+ ++WGFN+KGQLGLG+R+ P+ VK L + S+ CG H IT + ++SWG+GVFGQLGHG+ K L P + F ++ R+ V+CG++ +M S G Sbjct: 149 IIEASVSQYLSGEKKAYDANGGTKPKDDDEDKEASNSAQSKSKHLGKIIDLNQTIPMQIQDI--PEEVVDVSGGWAFSAAVTKSGRLYTWGFNEKGQLGLGNRWFHSTPQLVKTLIDVNIVSVVCGRQHICAITDQGEVYSWGLGVFGQLGHGNVKSYLHPKKIQQFVELNE-RIAQVACGSNFTMVRSVQG 337 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89112.20659.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig89112.20659.1 >prot_M-pyrifera_M_contig89112.20659.1 ID=prot_M-pyrifera_M_contig89112.20659.1|Name=mRNA_M-pyrifera_M_contig89112.20659.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=195bp GLKKEGVDDVVEASIAQYLAGDQDQDELQKELMETFVRYQEYYQARPKLIback to top mRNA from alignment at M-pyrifera_M_contig89112:5..780+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig89112.20659.1 ID=mRNA_M-pyrifera_M_contig89112.20659.1|Name=mRNA_M-pyrifera_M_contig89112.20659.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=776bp|location=Sequence derived from alignment at M-pyrifera_M_contig89112:5..780+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig89112:5..780+ >mRNA_M-pyrifera_M_contig89112.20659.1 ID=mRNA_M-pyrifera_M_contig89112.20659.1|Name=mRNA_M-pyrifera_M_contig89112.20659.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1170bp|location=Sequence derived from alignment at M-pyrifera_M_contig89112:5..780+ (Macrocystis pyrifera P11B4 male)back to top |