mRNA_M-pyrifera_M_contig8908.20654.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig8908.20654.1
Unique NamemRNA_M-pyrifera_M_contig8908.20654.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig8908.20654.1 vs. uniprot
Match: D8LQD6_ECTSI (HIT-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQD6_ECTSI)

HSP 1 Score: 320 bits (819), Expect = 2.760e-103
Identity = 183/328 (55.79%), Postives = 205/328 (62.50%), Query Frame = 1
Query:   22 LDLLTEEEKGRFLRELANGRLGKLIVAWEPWWEQSGGVQEVVT----GRTTHSLPP-------------------------------------------------------------------------ACTRHSFASLQNQACMAPDFSTLCAMKPSPALPSLAVDLAYAYVLAARLYNGCWCSDPVGASLALVGASPVLKDSATPATVGQALARCVERAVEGEGARFRSYAESLGQVSGDVLLVCSDPRKLICAFQDAWGMFEAAGRTLAPSNPAR--PAHARKSQRRAARELGKVEKRVGYFLLWARSHGAQAAPAMAEAVRRSL 768
            LDLLTEEEKGRF RE+A+GRLGKLIV W PWW Q+ GVQEV      GRT+HSLPP                                                                         +CTRHSFA+L +QA  AP F+T+ A +PSP LP+LA DLAYAYVL +RLYNGCWCSDPVGASLALVGASPVLKD ATP+T G+ALA CVERAVEGE   FR YAESL Q   DVL VCSDPRKLICAFQDAW M EAAGRTLAPS      PA  RK+QR+AARELGKVEKR+GYFLLWAR+HG + +P M   V  ++
Sbjct:  219 LDLLTEEEKGRFFREVASGRLGKLIVPWVPWWTQAAGVQEVAPITAGGRTSHSLPPPVVDPCRHHKHHAVCSSFATPPSGAPXXXXXXRPSTPEQXXXXXXSEFPASRSGXXXXXXXXXXXXXXXXXXXSCTRHSFAALLSQAFQAPGFTTINAREPSPTLPALATDLAYAYVLTSRLYNGCWCSDPVGASLALVGASPVLKDGATPSTAGEALAACVERAVEGERCGFRGYAESLQQ---DVLQVCSDPRKLICAFQDAWVMLEAAGRTLAPSMAKSFLPAAGRKAQRKAARELGKVEKRIGYFLLWARTHGEEVSPQMMRDVEAAV 543          
BLAST of mRNA_M-pyrifera_M_contig8908.20654.1 vs. uniprot
Match: A0A6H5KU08_9PHAE (HIT-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU08_9PHAE)

HSP 1 Score: 320 bits (821), Expect = 8.760e-102
Identity = 184/328 (56.10%), Postives = 205/328 (62.50%), Query Frame = 1
Query:   16 GALDLLTEEEKGRFLRELANGRLGKLIVAWEPWWEQSGGVQEVVT----GRTTHSLPPA-----------------------------------------------------------------------CTRHSFASLQNQACMAPDFSTLCAMKPSPALPSLAVDLAYAYVLAARLYNGCWCSDPVGASLALVGASPVLKDSATPATVGQALARCVERAVEGEGARFRSYAESLGQVSGDVLLVCSDPRKLICAFQDAWGMFEAAGRTLAPSNPAR--PAHARKSQRRAARELGKVEKRVGYFLLWARSHGAQAAPAMAEAVRRSL 768
            G L LLTEEEKGRF RE+A+GRLGKLIV W PWW Q+ GVQEV      GRT+HSLPP                                                                        CTRHSFA+L +QA  AP FST+ A +PSP LP+LA DLAYAYVL +RLYNGCWCSDPVGASLALVGASPVLKD ATPAT G+ALA CVERA+EGE + FR YAESL Q   DVL VCSDPRKLICAFQDAW M EAAGRTLAPS      PA  RK+QR+AARELGKVEKR+GYFLLWAR+HG + +P M   V  ++
Sbjct:  380 GILGLLTEEEKGRFFREVASGRLGKLIVPWVPWWTQAAGVQEVAPITAGGRTSHSLPPPVVDPCRHHKHHAVCSSFGTPSSGAPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTRHSFAALLSQAFQAPGFSTINAREPSPTLPALATDLAYAYVLTSRLYNGCWCSDPVGASLALVGASPVLKDGATPATAGEALAACVERALEGERSGFRGYAESLRQ---DVLQVCSDPRKLICAFQDAWVMLEAAGRTLAPSMAKSFLPAAGRKAQRKAARELGKVEKRIGYFLLWARTHGEEVSPQMMRDVEAAV 704          
BLAST of mRNA_M-pyrifera_M_contig8908.20654.1 vs. uniprot
Match: A0A835ZEE4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEE4_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.990e-17
Identity = 71/250 (28.40%), Postives = 107/250 (42.80%), Query Frame = 1
Query:   19 ALDLLTEEEKGRFLRELANGRLGKLIVAWEPWWEQSGGVQEVVTGRTTHSLPP---------------ACTRHSFASLQNQA--CMAPDFSTLCAMKPSPALPSLAVDLAYAYVLAARLYNGCWCSDPVGASLALVGASPVLKDSATPATVGQALARCVERAVEGEGARFRSYAESLGQVSGDVLLVCSDPRKLICAFQDAWGMFEAAGRTLAPSNPARPAHARKSQRRAARELGKVEKRVGYFLLWARS 717
            +L+ L++EE+  F+R + +G L + +  WEPWWE    +       TT +  P                C+RH+ A L   A   +A D   L +   SP LP L +D+  +Y    RLYNGCWC DP+ A+  ++  S VL   A  A+V  A+  C  R     G    +  +   +   D L + S       A  D   +F AA               ++   +  + L  V KR+ YF  WAR+
Sbjct:   88 SLEHLSKEERAAFMRAVQSGVLTRYVQVWEPWWESPAKLLVQELPPTTSAAQPQQPAEGTYAVVDTDTTCSRHAAAQLLQAAHISLASDGLRLTSPAASPLLPHLVLDVLCSYAALMRLYNGCWCCDPLQAAADMLQLSAVLSKDARHASVALAMESCHLRQQALTGIAKGNATQLSIRALKDALSLLSTQVVTQTALLDLMALFAAA--------------LQEPGAKKKKTLALVAKRLEYFAAWART 323          
BLAST of mRNA_M-pyrifera_M_contig8908.20654.1 vs. uniprot
Match: A0A6G0XTL6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XTL6_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 3.420e-14
Identity = 70/253 (27.67%), Postives = 107/253 (42.29%), Query Frame = 1
Query:   22 LDLLTEEEKGRFLRELANGRLGKLIVAWEPWWEQSGGVQEVVTGRTTHSLPPA---------------CTRHSFASLQN--QACMAPDFSTLCAMKPSP---ALPSLAVDLAYAYVLAARLYNGCWCSDPVGASLALVGASPVLKDSATPATVGQALARC--VERAVEGEGARFRSYAESLGQVSGDVLLVCSDPRKLICAFQDAWGMFEAAGRTLAPSNPARPAHARKSQRRAARELGKVEKRVGYFLLWAR 714
            LD LT+EE+  FLRE+A+GRLGK I  WEPWW QS    E  T     SL  A                 RH      N  ++ + P   T+  + PSP   AL    VD+ +AY    R+YNG W  D + A    + +S VL+  A    +GQ +  C    R  + + A   +    +  + G  L +      L+   +      +A G +                 +  ++L +V K+V + ++WA+
Sbjct:   48 LDKLTQEERTNFLREVADGRLGKFITLWEPWWMQSITAYESTTQGLRQSLIVALDGIDDESDDFDDDVALRHPIGLFTNTLESKLPP---TIFDLHPSPNHEALECNLVDILFAYSFVMRMYNGDWRVDVLEAGALCISSSAVLQGKAHTNVLGQVVFACRAQTRIADADAAAKNAALADVTSILGQRLFILDSLCDLLLLVES----LQAEGAS-----------------KKKKDLNRVAKKVEFHIVWAK 276          
BLAST of mRNA_M-pyrifera_M_contig8908.20654.1 vs. uniprot
Match: A0A3R6YXS0_9STRA (HIT-type domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6YXS0_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 4.040e-14
Identity = 75/273 (27.47%), Postives = 116/273 (42.49%), Query Frame = 1
Query:    1 MLGDEGALDLLTEEEKGRFLRELANGRLGKLIVAWEPWWEQSGGVQEVVTGRTTHSL--------------PPACTRHSFASLQNQACMAPDFSTLCAMKPSP---ALPSLAVDLAYAYVLAARLYNGCWCSDPVGASLALVGASPVLKDSATPATVGQALARCVERAVEGEGARFRSYAESLGQVSGDVLLVCSDPRKLICAFQDAWGMFEAAGRTLAPSNPARPAHARKSQRRAARELGKVEKRVGYFLLWARSHGAQAAPAMAEAVRRSL 768
            M  D   LD LT+EE+  FLRE+A+GRLGK I  WEPWW QS    +  T      L                    H        A MA  F TL ++ P+P    L    V++ +AY    R+YNG W  D   A+   +  S VL    TPA +  ++   V       GA     A+++  +  DV  + +    ++    D   +F+   +T            R++ +R  + L  V K+V ++++WA SH  +    +   +R+ L
Sbjct:  137 MESDALTLDALTDEERSTFLREVADGRLGKYIALWEPWWMQSPAAYDTRTNNLRRCLIVDLHDGDGSLSLGEDDVLTHPLGIFT--ASMAASFPTLNSLHPNPNHAVLQCNLVEVIFAYAYVMRVYNGDWRVDVEDAASQCMAISSVLLG--TPAGMFTSIEHVVMTCQASGGADANDAAKNVALL--DVATILTHCVFVLDGLTDLHLLFQTTRQT------------RRADKRTKKMLALVVKKVEFYIVWA-SHMTKTDSQLLPRLRQQL 390          
BLAST of mRNA_M-pyrifera_M_contig8908.20654.1 vs. uniprot
Match: T0Q3L4_SAPDV (HIT-type domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q3L4_SAPDV)

HSP 1 Score: 80.1 bits (196), Expect = 1.280e-13
Identity = 56/164 (34.15%), Postives = 70/164 (42.68%), Query Frame = 1
Query:    1 MLGDEGALDLLTEEEKGRFLRELANGRLGKLIVAWEPWWEQSGGVQEVVTGRTTHSL-----------------PPACTRHSFASLQNQACMAPDFSTLCAMKPSPALPSLAVDLAYAYVLAARLYNGCWCSDPVGASLALVGASPVLKDSATPATVGQALARC 441
            M  D  +LD LT  E+ +FLRE+A+GRLGKLI  W PWW  S       T    H L                 PP   +H   + + +A + P  S L A   SP L     +L +AY    R YNG W +D   AS  LV  S VL       T+      C
Sbjct:  139 MESDALSLDALTPNERAQFLREVADGRLGKLIALWTPWWTTSPAAYAAATHSARHQLITAVDDDEDDIDGDVEVPPQHPKHILTTRRAKA-LEP-ISALHASPNSPVLCCNLFELLFAYAYTLRTYNGDWTADVAEASATLVALSAVLHSQRVYMTIDDVRTAC 300          
BLAST of mRNA_M-pyrifera_M_contig8908.20654.1 vs. uniprot
Match: A0A067CML1_SAPPC (HIT-type domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CML1_SAPPC)

HSP 1 Score: 78.6 bits (192), Expect = 4.280e-13
Identity = 55/161 (34.16%), Postives = 68/161 (42.24%), Query Frame = 1
Query:    1 MLGDEGALDLLTEEEKGRFLRELANGRLGKLIVAWEPWWEQSGGVQEVVTGRTTHSLPPACT-------------RHSFASLQNQACMAPD-FSTLCAMKPSPALPSLAVDLAYAYVLAARLYNGCWCSDPVGASLALVGASPVLKDSATPATVGQALARC 441
            M  D   LD LT +E+ +FLRE+A+GRLGKLI  W PWW  S       T    H L  A               +H    L      A +  S L A    P L     +L +AY    R YNG W +D + AS  L+  SPVL       T+    A C
Sbjct:  139 MESDALTLDALTPDERAQFLREVADGRLGKLIALWTPWWTSSPAAYAAATKSARHQLIVAIDDEXXXXXXXXGLPQHPKQLLTTARAKALEPISALHAAPNGPVLRCNLFELLFAYAYTLRDYNGDWTTDVLEASATLIALSPVLHSQRVYLTIEDVRAAC 299          
BLAST of mRNA_M-pyrifera_M_contig8908.20654.1 vs. uniprot
Match: A0A1V9ZJW8_9STRA (HIT-type domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJW8_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.070e-12
Identity = 57/147 (38.78%), Postives = 68/147 (46.26%), Query Frame = 1
Query:    1 MLGDEGALDLLTEEEKGRFLRELANGRLGKLIVAWEPWWEQSGGVQEVVTGRTTHSLPPACTR----------HSFASLQNQACMAPDFSTLCAMKPSPALPSLAVDL-----AYAYVLAARLYNGCWCSDPVGASLALVGASPVLK 396
            M  D   LD LT+EE+ +FLRE+A+GRLGK I  W PWW QS       T    H L  A             H        A  A     + A+  SP    L  +L     AYAY L  R YNG W +D V AS AL+G S VL+
Sbjct:  141 MESDALTLDALTDEERAQFLREVADGRLGKHIALWTPWWTQSPEAYAANTKSVRHQLIVALDEDGEDSDVEVLHDHPRGLLTAVRAKALEPMAALHASPNGRVLRCNLFEVLFAYAYTL--RTYNGDWATDAVEASAALLGLSSVLQ 285          
BLAST of mRNA_M-pyrifera_M_contig8908.20654.1 vs. uniprot
Match: A0A662WLM3_9STRA (HIT-type domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WLM3_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 3.200e-12
Identity = 74/263 (28.14%), Postives = 114/263 (43.35%), Query Frame = 1
Query:   22 LDLLTEEEKGRFLRELANGRLGKLIVAWEPWW---------EQSGGVQEVVTGRTTHS-------------LPPAC--------TRHSFASLQNQACMAPDFSTLCAMKPSPALPSLAVDLAYAYVLAARLYNGCWCSDPVGASLALVGASPVLKDSATPATVGQALARCVERAVEGEGARFR---SYAESLGQVSGDVLLVCSDPRKLICAFQDAWGMFEAAGRTLAPSNPARPAHARKSQRRAARELGKVEKRVGYFLLWA 711
            ++ LT EE+ RFL E+A+GRLGKL+  W PWW         E S   +EV+    + S             L PA         TR + A  ++ A + P+        PSP L    V+L +AY L  R +NG +  D   A+L L+  S VL   A   ++  A   C+E     + A  R     A+ L +    +L   SD + L+  +Q                    P H +K +++A+++L  V K++ +F  WA
Sbjct:  161 METLTSEERKRFLAEVADGRLGKLVALWSPWWLLSERKYCNETSARRREVILEEISSSSEATGEVETPPTTLEPAVAFPVGLFTTREAKAMPESLATLLPN-----GKPPSPKLRFHLVELLFAYALVLRTFNGDYAQDVADAALLLLARSRVLSADARYESLEHACLVCLEAQTPEDVAANRLALQDAQRLLESRVFLLDALSDMQMLVTQYQHEL-----------------PGH-KKQRKQASKQLAAVLKKLQFFQTWA 400          
BLAST of mRNA_M-pyrifera_M_contig8908.20654.1 vs. uniprot
Match: A0A662WT80_9STRA (Cilia- and flagella-associated protein 300 n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WT80_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.420e-11
Identity = 69/258 (26.74%), Postives = 109/258 (42.25%), Query Frame = 1
Query:   22 LDLLTEEEKGRFLRELANGRLGKLIVAWEPWW---------EQSGGVQEVVTGRTTHS--------LPPACTRHSFA------SLQNQACMAPDFSTLC--AMKPSPALPSLAVDLAYAYVLAARLYNGCWCSDPVGASLALVGASPVLKDSATPATVGQALARCVERAVEGEGARFRSYAESLGQVSGD---VLLVCSDPRKLICAFQDAWGMFEAAGRTLAPSNPARPAHARKSQRRAARELGKVEKRVGYFLLWA 711
            ++ LT EE+ RFL E+A+GRLGKL+  W PWW         E S   +E++    + S         PP     + A      + +    M    +TL      PSP L    V+L +AY L  R +NG +  D    +L L+  S VL   A   ++  A   C+E     + A  R   +   ++      VL   SD + L+  +Q                    P H +K +++A+++L  V K++ +F  WA
Sbjct:  413 MEALTPEERKRFLAEVADGRLGKLVALWSPWWLLSERKYCNETSARRREIILEEISSSSEATGEVETPPTTLESAVAFPVGLFTTREAKAMPESLATLLPNGKPPSPKLQFHLVELLFAYALVLRTFNGDYAQDVADVTLLLLARSRVLSADARYESLEHACLVCLEAQTPEDVAANRLALQDTQRLLESRVFVLDALSDTQMLLTQYQHEL-----------------PGH-KKQRKQASKQLAAVLKKLQFFQTWA 652          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8908.20654.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
D8LQD6_ECTSI2.760e-10355.79HIT-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KU08_9PHAE8.760e-10256.10HIT-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A835ZEE4_9STRA1.990e-1728.40Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6G0XTL6_9STRA3.420e-1427.67Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A3R6YXS0_9STRA4.040e-1427.47HIT-type domain-containing protein n=1 Tax=Aphanom... [more]
T0Q3L4_SAPDV1.280e-1334.15HIT-type domain-containing protein n=1 Tax=Saprole... [more]
A0A067CML1_SAPPC4.280e-1334.16HIT-type domain-containing protein n=1 Tax=Saprole... [more]
A0A1V9ZJW8_9STRA1.070e-1238.78HIT-type domain-containing protein n=1 Tax=Achlya ... [more]
A0A662WLM3_9STRA3.200e-1228.14HIT-type domain-containing protein n=1 Tax=Nothoph... [more]
A0A662WT80_9STRA1.420e-1126.74Cilia- and flagella-associated protein 300 n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8908contigM-pyrifera_M_contig8908:2252..4108 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score322.4
Seed ortholog evalue1.9e-85
Seed eggNOG ortholog2880.D8LQD6
Preferred nameZNHIT2
KEGG rclassRC00002,RC00078
KEGG koko:K00888,ko:K02888,ko:K12874
KEGG ReactionR03361
KEGG Pathwayko00562,ko01100,ko03010,ko03040,ko04011,ko04070,map00562,map01100,map03010,map03040,map04011,map04070
KEGG ModuleM00130,M00178,M00355
Hectar predicted targeting categoryother localisation
GOsGO:0007275,GO:0007399,GO:0008150,GO:0009987,GO:0022008,GO:0030154,GO:0032501,GO:0032502,GO:0048731,GO:0048856,GO:0048869
EggNOG free text desc.zinc finger
EggNOG OGsKOG4317@1,KOG4317@2759
Ec32 ortholog descriptionZinc finger, HIT-type
Ec32 orthologEc-10_005250.1
EC2.7.1.67
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko03011,ko03041,ko04131
Exons3
Model size780
Cds size780
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8908.20654.1prot_M-pyrifera_M_contig8908.20654.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig8908 2252..4108 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816800.8471005-CDS-M-pyrifera_M_contig8908:2251..24311622816800.8471005-CDS-M-pyrifera_M_contig8908:2251..2431Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8908 2252..2431 +
1692278186.3729486-CDS-M-pyrifera_M_contig8908:2251..24311692278186.3729486-CDS-M-pyrifera_M_contig8908:2251..2431Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8908 2252..2431 +
1622816800.8617136-CDS-M-pyrifera_M_contig8908:2818..31511622816800.8617136-CDS-M-pyrifera_M_contig8908:2818..3151Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8908 2819..3151 +
1692278186.3897293-CDS-M-pyrifera_M_contig8908:2818..31511692278186.3897293-CDS-M-pyrifera_M_contig8908:2818..3151Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8908 2819..3151 +
1622816800.878125-CDS-M-pyrifera_M_contig8908:3841..41081622816800.878125-CDS-M-pyrifera_M_contig8908:3841..4108Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8908 3842..4108 +
1692278186.4030726-CDS-M-pyrifera_M_contig8908:3841..41081692278186.4030726-CDS-M-pyrifera_M_contig8908:3841..4108Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8908 3842..4108 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig8908.20654.1

>prot_M-pyrifera_M_contig8908.20654.1 ID=prot_M-pyrifera_M_contig8908.20654.1|Name=mRNA_M-pyrifera_M_contig8908.20654.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=260bp
MLGDEGALDLLTEEEKGRFLRELANGRLGKLIVAWEPWWEQSGGVQEVVT
GRTTHSLPPACTRHSFASLQNQACMAPDFSTLCAMKPSPALPSLAVDLAY
AYVLAARLYNGCWCSDPVGASLALVGASPVLKDSATPATVGQALARCVER
AVEGEGARFRSYAESLGQVSGDVLLVCSDPRKLICAFQDAWGMFEAAGRT
LAPSNPARPAHARKSQRRAARELGKVEKRVGYFLLWARSHGAQAAPAMAE
AVRRSLGSD*
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mRNA from alignment at M-pyrifera_M_contig8908:2252..4108+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig8908.20654.1 ID=mRNA_M-pyrifera_M_contig8908.20654.1|Name=mRNA_M-pyrifera_M_contig8908.20654.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1857bp|location=Sequence derived from alignment at M-pyrifera_M_contig8908:2252..4108+ (Macrocystis pyrifera P11B4 male)
ATGCTTGGAGACGAGGGAGCGCTTGACCTCCTGACGGAAGAGGAAAAGGG TCGATTCTTGAGGGAGCTGGCCAACGGGCGGCTTGGCAAGCTTATCGTTG CGTGGGAGCCGTGGTGGGAGCAGTCTGGAGGGGTGCAGGAGGTGGTGACG GGGCGTACGACGCATTCCCTTCCGCCCGCGGTTGTCGCGCCCTGTTTCGT GGGGAAAAGTTTCGCTGGCGGCGACGGTGGCGCTCCGGCCTCGTGCTCGC TGACACAGCCACCCACGCCGGAGGAGAGGAGCGAGGAGAAGCAGCAGAAG CCACAGCAGCGGCGGCGGCAGGGACAACCGGTCTTGGACTTGACGGGTAG CGGTGGTGGTGGTGGTGATGACGGTGTTAGCGTGATTGCTGCAGCGGCGA GTGCTGTGGCCCACTCTGGCGGACAGAGAGAAGGTTTGGAGGAGGAGGAA GAGGGGGAGGAGGGGAATGGGCGGGAGAAGGGGGGGAGGGAGACTGAAGA GAAGGAGGGAGGGGAGAAGGGGAGGCGGGGGGAGGAGAAGGAGAGAGTTA AGGAGGAGGAAGAGGAGTGCACGCGGCACTCGTTTGCCTCGCTGCAGAAC CAGGCCTGCATGGCGCCCGACTTCTCGACGCTCTGCGCGATGAAACCCTC CCCCGCCCTGCCTTCCCTCGCGGTCGATCTCGCCTACGCCTACGTGCTCG CGGCACGGCTGTACAACGGCTGCTGGTGCTCCGACCCAGTGGGGGCATCT CTGGCCCTTGTCGGAGCGTCCCCGGTTTTGAAGGACAGCGCAACGCCTGC CACGGTGGGGCAGGCGCTGGCGCGATGCGTCGAGCGCGCAGTGGAGGGGG AGGGCGCGAGGTTCAGAAGCTACGCTGAATCGCTTGGGCAGGTTAGTGGG GTATAGGCTGGGGTTGGGTTGAGGTAGGGGTTGGGGGATGACTTTGGGGT GTGGTTGGGGTTGAGGGTGGGCTGCGTCGATGGAATCTGTGAAGCGCCCG CTGTGTAGCTTGCACGTCGTCCGTCCCAGTATCCTTCCCCTTTCAAGTGT CTCTGCGGGATGTGCCCCCCCCCCCCCCCTGTTTTAGTTTAGTTTTTTGT TCGGCGGTCGGTCACAGCTGGCGATGGAGTTATACATCATTTGTGCGGGG TGGAGAGTCTTTACTCCGCACGAGGAGAATGATCGCATCACGTAGTGTTT TTGGTATGGCACCCACGAGGCAGTCACATAGTACCCCAATTGCTGTCTCT GGAAGTGGCCACACCGGAAATTAAAGTAACTCGTTGAAGCTGTCATCCAT GTCCGCCTCACAAGCGGTTCTTGGTACGATGCAGCTCTCCCTTCATGCGA CTCGTCGAACACCTCACGGCGCTTCGCGCCTGGTGCAAGCAATATCTGCC TGGTCGGTAAAAAAACCGACGTGCTCCGTCCCGGCATTGTAGAGATGCGA CAGTCTATGGTCATACGACTACGGCCATGAATGATATCGAGAATACCCTG CTCCCCCCACCCCCGCCATCCACCCTCCCCTAATCGTACCCCACCTCCCA CCTCACCCCCACCCCCACTCCCCCATCCTGACGCTCACAGGACGTTCTTC TGGTGTGCAGCGACCCCCGTAAGCTGATCTGCGCGTTTCAAGATGCCTGG GGCATGTTCGAGGCTGCCGGTCGTACCCTTGCCCCCTCCAATCCGGCTCG ACCCGCCCACGCCAGAAAGAGCCAGAGGAGAGCGGCGAGAGAGCTGGGAA AGGTTGAGAAGCGCGTGGGGTACTTCTTGCTCTGGGCGCGCTCGCACGGT GCGCAGGCGGCGCCCGCCATGGCAGAAGCGGTTAGGCGGTCCTTGGGGAG CGATTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig8908:2252..4108+

>mRNA_M-pyrifera_M_contig8908.20654.1 ID=mRNA_M-pyrifera_M_contig8908.20654.1|Name=mRNA_M-pyrifera_M_contig8908.20654.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1560bp|location=Sequence derived from alignment at M-pyrifera_M_contig8908:2252..4108+ (Macrocystis pyrifera P11B4 male)
ATGCTTGGAGACGAGGGAGCGCTTGACCTCCTGACGGAAGAGGAAAAGGG
TCGATTCTTGAGGGAGCTGGCCAACGGGCGGCTTGGCAAGCTTATCGTTG
CGTGGGAGCCGTGGTGGGAGCAGTCTGGAGGGGTGCAGGAGGTGGTGACG
GGGCGTACGACGCATTCCCTTCCGCCCGCGATGCTTGGAGACGAGGGAGC
GCTTGACCTCCTGACGGAAGAGGAAAAGGGTCGATTCTTGAGGGAGCTGG
CCAACGGGCGGCTTGGCAAGCTTATCGTTGCGTGGGAGCCGTGGTGGGAG
CAGTCTGGAGGGGTGCAGGAGGTGGTGACGGGGCGTACGACGCATTCCCT
TCCGCCCGCGTGCACGCGGCACTCGTTTGCCTCGCTGCAGAACCAGGCCT
GCATGGCGCCCGACTTCTCGACGCTCTGCGCGATGAAACCCTCCCCCGCC
CTGCCTTCCCTCGCGGTCGATCTCGCCTACGCCTACGTGCTCGCGGCACG
GCTGTACAACGGCTGCTGGTGCTCCGACCCAGTGGGGGCATCTCTGGCCC
TTGTCGGAGCGTCCCCGGTTTTGAAGGACAGCGCAACGCCTGCCACGGTG
GGGCAGGCGCTGGCGCGATGCGTCGAGCGCGCAGTGGAGGGGGAGGGCGC
GAGGTTCAGAAGCTACGCTGAATCGCTTGGGCAGGTTAGTGGGTGCACGC
GGCACTCGTTTGCCTCGCTGCAGAACCAGGCCTGCATGGCGCCCGACTTC
TCGACGCTCTGCGCGATGAAACCCTCCCCCGCCCTGCCTTCCCTCGCGGT
CGATCTCGCCTACGCCTACGTGCTCGCGGCACGGCTGTACAACGGCTGCT
GGTGCTCCGACCCAGTGGGGGCATCTCTGGCCCTTGTCGGAGCGTCCCCG
GTTTTGAAGGACAGCGCAACGCCTGCCACGGTGGGGCAGGCGCTGGCGCG
ATGCGTCGAGCGCGCAGTGGAGGGGGAGGGCGCGAGGTTCAGAAGCTACG
CTGAATCGCTTGGGCAGGTTAGTGGGGACGTTCTTCTGGTGTGCAGCGAC
CCCCGTAAGCTGATCTGCGCGTTTCAAGATGCCTGGGGCATGTTCGAGGC
TGCCGGTCGTACCCTTGCCCCCTCCAATCCGGCTCGACCCGCCCACGCCA
GAAAGAGCCAGAGGAGAGCGGCGAGAGAGCTGGGAAAGGTTGAGAAGCGC
GTGGGGTACTTCTTGCTCTGGGCGCGCTCGCACGGTGCGCAGGCGGCGCC
CGCCATGGCAGAAGCGGTTAGGCGGTCCTTGGGGAGCGATTGAGACGTTC
TTCTGGTGTGCAGCGACCCCCGTAAGCTGATCTGCGCGTTTCAAGATGCC
TGGGGCATGTTCGAGGCTGCCGGTCGTACCCTTGCCCCCTCCAATCCGGC
TCGACCCGCCCACGCCAGAAAGAGCCAGAGGAGAGCGGCGAGAGAGCTGG
GAAAGGTTGAGAAGCGCGTGGGGTACTTCTTGCTCTGGGCGCGCTCGCAC
GGTGCGCAGGCGGCGCCCGCCATGGCAGAAGCGGTTAGGCGGTCCTTGGG
GAGCGATTGA
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