mRNA_M-pyrifera_M_contig8908.20654.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8908.20654.1 vs. uniprot
Match: D8LQD6_ECTSI (HIT-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQD6_ECTSI) HSP 1 Score: 320 bits (819), Expect = 2.760e-103 Identity = 183/328 (55.79%), Postives = 205/328 (62.50%), Query Frame = 1 Query: 22 LDLLTEEEKGRFLRELANGRLGKLIVAWEPWWEQSGGVQEVVT----GRTTHSLPP-------------------------------------------------------------------------ACTRHSFASLQNQACMAPDFSTLCAMKPSPALPSLAVDLAYAYVLAARLYNGCWCSDPVGASLALVGASPVLKDSATPATVGQALARCVERAVEGEGARFRSYAESLGQVSGDVLLVCSDPRKLICAFQDAWGMFEAAGRTLAPSNPAR--PAHARKSQRRAARELGKVEKRVGYFLLWARSHGAQAAPAMAEAVRRSL 768 LDLLTEEEKGRF RE+A+GRLGKLIV W PWW Q+ GVQEV GRT+HSLPP +CTRHSFA+L +QA AP F+T+ A +PSP LP+LA DLAYAYVL +RLYNGCWCSDPVGASLALVGASPVLKD ATP+T G+ALA CVERAVEGE FR YAESL Q DVL VCSDPRKLICAFQDAW M EAAGRTLAPS PA RK+QR+AARELGKVEKR+GYFLLWAR+HG + +P M V ++ Sbjct: 219 LDLLTEEEKGRFFREVASGRLGKLIVPWVPWWTQAAGVQEVAPITAGGRTSHSLPPPVVDPCRHHKHHAVCSSFATPPSGAPXXXXXXRPSTPEQXXXXXXSEFPASRSGXXXXXXXXXXXXXXXXXXXSCTRHSFAALLSQAFQAPGFTTINAREPSPTLPALATDLAYAYVLTSRLYNGCWCSDPVGASLALVGASPVLKDGATPSTAGEALAACVERAVEGERCGFRGYAESLQQ---DVLQVCSDPRKLICAFQDAWVMLEAAGRTLAPSMAKSFLPAAGRKAQRKAARELGKVEKRIGYFLLWARTHGEEVSPQMMRDVEAAV 543
BLAST of mRNA_M-pyrifera_M_contig8908.20654.1 vs. uniprot
Match: A0A6H5KU08_9PHAE (HIT-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU08_9PHAE) HSP 1 Score: 320 bits (821), Expect = 8.760e-102 Identity = 184/328 (56.10%), Postives = 205/328 (62.50%), Query Frame = 1 Query: 16 GALDLLTEEEKGRFLRELANGRLGKLIVAWEPWWEQSGGVQEVVT----GRTTHSLPPA-----------------------------------------------------------------------CTRHSFASLQNQACMAPDFSTLCAMKPSPALPSLAVDLAYAYVLAARLYNGCWCSDPVGASLALVGASPVLKDSATPATVGQALARCVERAVEGEGARFRSYAESLGQVSGDVLLVCSDPRKLICAFQDAWGMFEAAGRTLAPSNPAR--PAHARKSQRRAARELGKVEKRVGYFLLWARSHGAQAAPAMAEAVRRSL 768 G L LLTEEEKGRF RE+A+GRLGKLIV W PWW Q+ GVQEV GRT+HSLPP CTRHSFA+L +QA AP FST+ A +PSP LP+LA DLAYAYVL +RLYNGCWCSDPVGASLALVGASPVLKD ATPAT G+ALA CVERA+EGE + FR YAESL Q DVL VCSDPRKLICAFQDAW M EAAGRTLAPS PA RK+QR+AARELGKVEKR+GYFLLWAR+HG + +P M V ++ Sbjct: 380 GILGLLTEEEKGRFFREVASGRLGKLIVPWVPWWTQAAGVQEVAPITAGGRTSHSLPPPVVDPCRHHKHHAVCSSFGTPSSGAPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTRHSFAALLSQAFQAPGFSTINAREPSPTLPALATDLAYAYVLTSRLYNGCWCSDPVGASLALVGASPVLKDGATPATAGEALAACVERALEGERSGFRGYAESLRQ---DVLQVCSDPRKLICAFQDAWVMLEAAGRTLAPSMAKSFLPAAGRKAQRKAARELGKVEKRIGYFLLWARTHGEEVSPQMMRDVEAAV 704
BLAST of mRNA_M-pyrifera_M_contig8908.20654.1 vs. uniprot
Match: A0A835ZEE4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEE4_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 1.990e-17 Identity = 71/250 (28.40%), Postives = 107/250 (42.80%), Query Frame = 1 Query: 19 ALDLLTEEEKGRFLRELANGRLGKLIVAWEPWWEQSGGVQEVVTGRTTHSLPP---------------ACTRHSFASLQNQA--CMAPDFSTLCAMKPSPALPSLAVDLAYAYVLAARLYNGCWCSDPVGASLALVGASPVLKDSATPATVGQALARCVERAVEGEGARFRSYAESLGQVSGDVLLVCSDPRKLICAFQDAWGMFEAAGRTLAPSNPARPAHARKSQRRAARELGKVEKRVGYFLLWARS 717 +L+ L++EE+ F+R + +G L + + WEPWWE + TT + P C+RH+ A L A +A D L + SP LP L +D+ +Y RLYNGCWC DP+ A+ ++ S VL A A+V A+ C R G + + + D L + S A D +F AA ++ + + L V KR+ YF WAR+ Sbjct: 88 SLEHLSKEERAAFMRAVQSGVLTRYVQVWEPWWESPAKLLVQELPPTTSAAQPQQPAEGTYAVVDTDTTCSRHAAAQLLQAAHISLASDGLRLTSPAASPLLPHLVLDVLCSYAALMRLYNGCWCCDPLQAAADMLQLSAVLSKDARHASVALAMESCHLRQQALTGIAKGNATQLSIRALKDALSLLSTQVVTQTALLDLMALFAAA--------------LQEPGAKKKKTLALVAKRLEYFAAWART 323
BLAST of mRNA_M-pyrifera_M_contig8908.20654.1 vs. uniprot
Match: A0A6G0XTL6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XTL6_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 3.420e-14 Identity = 70/253 (27.67%), Postives = 107/253 (42.29%), Query Frame = 1 Query: 22 LDLLTEEEKGRFLRELANGRLGKLIVAWEPWWEQSGGVQEVVTGRTTHSLPPA---------------CTRHSFASLQN--QACMAPDFSTLCAMKPSP---ALPSLAVDLAYAYVLAARLYNGCWCSDPVGASLALVGASPVLKDSATPATVGQALARC--VERAVEGEGARFRSYAESLGQVSGDVLLVCSDPRKLICAFQDAWGMFEAAGRTLAPSNPARPAHARKSQRRAARELGKVEKRVGYFLLWAR 714 LD LT+EE+ FLRE+A+GRLGK I WEPWW QS E T SL A RH N ++ + P T+ + PSP AL VD+ +AY R+YNG W D + A + +S VL+ A +GQ + C R + + A + + + G L + L+ + +A G + + ++L +V K+V + ++WA+ Sbjct: 48 LDKLTQEERTNFLREVADGRLGKFITLWEPWWMQSITAYESTTQGLRQSLIVALDGIDDESDDFDDDVALRHPIGLFTNTLESKLPP---TIFDLHPSPNHEALECNLVDILFAYSFVMRMYNGDWRVDVLEAGALCISSSAVLQGKAHTNVLGQVVFACRAQTRIADADAAAKNAALADVTSILGQRLFILDSLCDLLLLVES----LQAEGAS-----------------KKKKDLNRVAKKVEFHIVWAK 276
BLAST of mRNA_M-pyrifera_M_contig8908.20654.1 vs. uniprot
Match: A0A3R6YXS0_9STRA (HIT-type domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6YXS0_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 4.040e-14 Identity = 75/273 (27.47%), Postives = 116/273 (42.49%), Query Frame = 1 Query: 1 MLGDEGALDLLTEEEKGRFLRELANGRLGKLIVAWEPWWEQSGGVQEVVTGRTTHSL--------------PPACTRHSFASLQNQACMAPDFSTLCAMKPSP---ALPSLAVDLAYAYVLAARLYNGCWCSDPVGASLALVGASPVLKDSATPATVGQALARCVERAVEGEGARFRSYAESLGQVSGDVLLVCSDPRKLICAFQDAWGMFEAAGRTLAPSNPARPAHARKSQRRAARELGKVEKRVGYFLLWARSHGAQAAPAMAEAVRRSL 768 M D LD LT+EE+ FLRE+A+GRLGK I WEPWW QS + T L H A MA F TL ++ P+P L V++ +AY R+YNG W D A+ + S VL TPA + ++ V GA A+++ + DV + + ++ D +F+ +T R++ +R + L V K+V ++++WA SH + + +R+ L Sbjct: 137 MESDALTLDALTDEERSTFLREVADGRLGKYIALWEPWWMQSPAAYDTRTNNLRRCLIVDLHDGDGSLSLGEDDVLTHPLGIFT--ASMAASFPTLNSLHPNPNHAVLQCNLVEVIFAYAYVMRVYNGDWRVDVEDAASQCMAISSVLLG--TPAGMFTSIEHVVMTCQASGGADANDAAKNVALL--DVATILTHCVFVLDGLTDLHLLFQTTRQT------------RRADKRTKKMLALVVKKVEFYIVWA-SHMTKTDSQLLPRLRQQL 390
BLAST of mRNA_M-pyrifera_M_contig8908.20654.1 vs. uniprot
Match: T0Q3L4_SAPDV (HIT-type domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q3L4_SAPDV) HSP 1 Score: 80.1 bits (196), Expect = 1.280e-13 Identity = 56/164 (34.15%), Postives = 70/164 (42.68%), Query Frame = 1 Query: 1 MLGDEGALDLLTEEEKGRFLRELANGRLGKLIVAWEPWWEQSGGVQEVVTGRTTHSL-----------------PPACTRHSFASLQNQACMAPDFSTLCAMKPSPALPSLAVDLAYAYVLAARLYNGCWCSDPVGASLALVGASPVLKDSATPATVGQALARC 441 M D +LD LT E+ +FLRE+A+GRLGKLI W PWW S T H L PP +H + + +A + P S L A SP L +L +AY R YNG W +D AS LV S VL T+ C Sbjct: 139 MESDALSLDALTPNERAQFLREVADGRLGKLIALWTPWWTTSPAAYAAATHSARHQLITAVDDDEDDIDGDVEVPPQHPKHILTTRRAKA-LEP-ISALHASPNSPVLCCNLFELLFAYAYTLRTYNGDWTADVAEASATLVALSAVLHSQRVYMTIDDVRTAC 300
BLAST of mRNA_M-pyrifera_M_contig8908.20654.1 vs. uniprot
Match: A0A067CML1_SAPPC (HIT-type domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CML1_SAPPC) HSP 1 Score: 78.6 bits (192), Expect = 4.280e-13 Identity = 55/161 (34.16%), Postives = 68/161 (42.24%), Query Frame = 1 Query: 1 MLGDEGALDLLTEEEKGRFLRELANGRLGKLIVAWEPWWEQSGGVQEVVTGRTTHSLPPACT-------------RHSFASLQNQACMAPD-FSTLCAMKPSPALPSLAVDLAYAYVLAARLYNGCWCSDPVGASLALVGASPVLKDSATPATVGQALARC 441 M D LD LT +E+ +FLRE+A+GRLGKLI W PWW S T H L A +H L A + S L A P L +L +AY R YNG W +D + AS L+ SPVL T+ A C Sbjct: 139 MESDALTLDALTPDERAQFLREVADGRLGKLIALWTPWWTSSPAAYAAATKSARHQLIVAIDDEXXXXXXXXGLPQHPKQLLTTARAKALEPISALHAAPNGPVLRCNLFELLFAYAYTLRDYNGDWTTDVLEASATLIALSPVLHSQRVYLTIEDVRAAC 299
BLAST of mRNA_M-pyrifera_M_contig8908.20654.1 vs. uniprot
Match: A0A1V9ZJW8_9STRA (HIT-type domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJW8_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 1.070e-12 Identity = 57/147 (38.78%), Postives = 68/147 (46.26%), Query Frame = 1 Query: 1 MLGDEGALDLLTEEEKGRFLRELANGRLGKLIVAWEPWWEQSGGVQEVVTGRTTHSLPPACTR----------HSFASLQNQACMAPDFSTLCAMKPSPALPSLAVDL-----AYAYVLAARLYNGCWCSDPVGASLALVGASPVLK 396 M D LD LT+EE+ +FLRE+A+GRLGK I W PWW QS T H L A H A A + A+ SP L +L AYAY L R YNG W +D V AS AL+G S VL+ Sbjct: 141 MESDALTLDALTDEERAQFLREVADGRLGKHIALWTPWWTQSPEAYAANTKSVRHQLIVALDEDGEDSDVEVLHDHPRGLLTAVRAKALEPMAALHASPNGRVLRCNLFEVLFAYAYTL--RTYNGDWATDAVEASAALLGLSSVLQ 285
BLAST of mRNA_M-pyrifera_M_contig8908.20654.1 vs. uniprot
Match: A0A662WLM3_9STRA (HIT-type domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WLM3_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 3.200e-12 Identity = 74/263 (28.14%), Postives = 114/263 (43.35%), Query Frame = 1 Query: 22 LDLLTEEEKGRFLRELANGRLGKLIVAWEPWW---------EQSGGVQEVVTGRTTHS-------------LPPAC--------TRHSFASLQNQACMAPDFSTLCAMKPSPALPSLAVDLAYAYVLAARLYNGCWCSDPVGASLALVGASPVLKDSATPATVGQALARCVERAVEGEGARFR---SYAESLGQVSGDVLLVCSDPRKLICAFQDAWGMFEAAGRTLAPSNPARPAHARKSQRRAARELGKVEKRVGYFLLWA 711 ++ LT EE+ RFL E+A+GRLGKL+ W PWW E S +EV+ + S L PA TR + A ++ A + P+ PSP L V+L +AY L R +NG + D A+L L+ S VL A ++ A C+E + A R A+ L + +L SD + L+ +Q P H +K +++A+++L V K++ +F WA Sbjct: 161 METLTSEERKRFLAEVADGRLGKLVALWSPWWLLSERKYCNETSARRREVILEEISSSSEATGEVETPPTTLEPAVAFPVGLFTTREAKAMPESLATLLPN-----GKPPSPKLRFHLVELLFAYALVLRTFNGDYAQDVADAALLLLARSRVLSADARYESLEHACLVCLEAQTPEDVAANRLALQDAQRLLESRVFLLDALSDMQMLVTQYQHEL-----------------PGH-KKQRKQASKQLAAVLKKLQFFQTWA 400
BLAST of mRNA_M-pyrifera_M_contig8908.20654.1 vs. uniprot
Match: A0A662WT80_9STRA (Cilia- and flagella-associated protein 300 n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WT80_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 1.420e-11 Identity = 69/258 (26.74%), Postives = 109/258 (42.25%), Query Frame = 1 Query: 22 LDLLTEEEKGRFLRELANGRLGKLIVAWEPWW---------EQSGGVQEVVTGRTTHS--------LPPACTRHSFA------SLQNQACMAPDFSTLC--AMKPSPALPSLAVDLAYAYVLAARLYNGCWCSDPVGASLALVGASPVLKDSATPATVGQALARCVERAVEGEGARFRSYAESLGQVSGD---VLLVCSDPRKLICAFQDAWGMFEAAGRTLAPSNPARPAHARKSQRRAARELGKVEKRVGYFLLWA 711 ++ LT EE+ RFL E+A+GRLGKL+ W PWW E S +E++ + S PP + A + + M +TL PSP L V+L +AY L R +NG + D +L L+ S VL A ++ A C+E + A R + ++ VL SD + L+ +Q P H +K +++A+++L V K++ +F WA Sbjct: 413 MEALTPEERKRFLAEVADGRLGKLVALWSPWWLLSERKYCNETSARRREIILEEISSSSEATGEVETPPTTLESAVAFPVGLFTTREAKAMPESLATLLPNGKPPSPKLQFHLVELLFAYALVLRTFNGDYAQDVADVTLLLLARSRVLSADARYESLEHACLVCLEAQTPEDVAANRLALQDTQRLLESRVFVLDALSDTQMLLTQYQHEL-----------------PGH-KKQRKQASKQLAAVLKKLQFFQTWA 652 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8908.20654.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8908.20654.1 >prot_M-pyrifera_M_contig8908.20654.1 ID=prot_M-pyrifera_M_contig8908.20654.1|Name=mRNA_M-pyrifera_M_contig8908.20654.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=260bp MLGDEGALDLLTEEEKGRFLRELANGRLGKLIVAWEPWWEQSGGVQEVVTback to top mRNA from alignment at M-pyrifera_M_contig8908:2252..4108+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8908.20654.1 ID=mRNA_M-pyrifera_M_contig8908.20654.1|Name=mRNA_M-pyrifera_M_contig8908.20654.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1857bp|location=Sequence derived from alignment at M-pyrifera_M_contig8908:2252..4108+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8908:2252..4108+ >mRNA_M-pyrifera_M_contig8908.20654.1 ID=mRNA_M-pyrifera_M_contig8908.20654.1|Name=mRNA_M-pyrifera_M_contig8908.20654.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1560bp|location=Sequence derived from alignment at M-pyrifera_M_contig8908:2252..4108+ (Macrocystis pyrifera P11B4 male)back to top |