mRNA_M-pyrifera_M_contig89061.20650.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig89061.20650.1
Unique NamemRNA_M-pyrifera_M_contig89061.20650.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig89061.20650.1 vs. uniprot
Match: A0A7V4HV31_9BACT (Extracellular solute-binding protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V4HV31_9BACT)

HSP 1 Score: 210 bits (535), Expect = 5.480e-61
Identity = 120/274 (43.80%), Postives = 155/274 (56.57%), Query Frame = 1
Query:    4 HYSALFKIGTMEPLIGGPPFVRALEEMVKLYGSDSEQVEQLSPDEVRQRFWNGQCALAIGWPSSAATDLHSDPSYKTEAKQDQPVEA---------DFCAFPAAREVFNPGQQEWGARADDDSGTVPLVAIEGRLASICADSDHKKAALALIAALSGREWGTTVFARSPATTLYRNSQRRDVVAWIEPPVSAAAANSYAELVVDMFSGSEAITALRIPGRERYLAALSTAVTDALAGKDSPQVLLKRVAAKWEEITIELGSDRQRLAYQRSLGL 798
            +YSA+F++ TMEPLI GPPFVRALEE V+  G  + +  +  P +VR+ FW G+C +AI WPSSA  D+   PS  T+A +    EA              P + EV+N   Q W  R  ++   VPL+ + GRL  +         A  L+A LSG+  G    A SPATTL+R S  R   AW EP   AA A  YA L     S  +A+ ALR+PGR  YLAAL  AV  A+ G+  P   L++V  +W+EIT  LG DRQR AY+RSLGL
Sbjct:  267 NYSAVFQLETMEPLIDGPPFVRALEEQVEALGKSAAEHLRADPADVRRAFWAGRCGMAITWPSSAVRDVRPAPSGTTKASKAVSKEAKGEGREIRLSVAELPGSTEVYNIASQSWEPRRPEEDARVPLLGVAGRLGVVTTRCPSTDTAFRLLAWLSGQASGRAAAALSPATTLFRQSDLRFPQAWTEPEFPAALAAQYALLTQQTLSREQAMFALRLPGRGEYLAALDEAVHQAIRGQQKPLDALRQVKIRWQEITSRLGLDRQREAYRRSLGL 540          
BLAST of mRNA_M-pyrifera_M_contig89061.20650.1 vs. uniprot
Match: A0A1G2Z815_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium RBG_13_63_9 TaxID=1801965 RepID=A0A1G2Z815_9BACT)

HSP 1 Score: 187 bits (475), Expect = 4.430e-55
Identity = 105/260 (40.38%), Postives = 144/260 (55.38%), Query Frame = 1
Query:   34 MEPLIGGPPFVRALEEMVKLYGSDSEQVEQLSPDEVRQRFWNGQCALAIGWPSSAATDLHSDPSYKTEAKQ---DQP--VEADFCAFPAAREVFNPGQQEWGARADDDSGTVPLVAIEGRLASICADSDHKKAALALIAALSGREWGTTVFARSPATTLYRNSQRRDVVAWIEPPVSAAAANSYAELVVDMFSGSEAITALRIPGRERYLAALSTAVTDALAGKDSPQVLLKRVAAKWEEITIELGSDRQRLAYQRSLGL 798
            MEPL+ GPPFVRAL+E+V      S    Q  P   R  FW GQC +A+ WP+ AA  L    +  +       D+P  ++  F   P +R+V+N G Q W  R +DD   VPL+ + GR   + + S H   A  L+  LSG+++G  + A SPATTL+R SQ +   AW+E P+ AAAA  YA          + ++ALRIPGR  YL+AL  AV  A  G+ S    L+  AA+W +IT + G   Q+ AY +SLGL
Sbjct:    1 MEPLVAGPPFVRALQELVAAAKLGSHDGLQCDPASARAAFWKGQCGMALTWPTRAADGLPGGAAGGSSGDLGAGDRPNAIQVGFAELPGSRDVYNVGSQSWENRPEDDDPHVPLLGVAGRAGVVGSSSKHPGPAFQLLLWLSGKQFGQRICATSPATTLFRLSQAKSPQAWVEQPIPAAAAGQYAATTQRTLMRQQWLSALRIPGRAEYLSALDEAVGRAARGERSAAEALRDAAARWRDITQQRGLQSQKSAYLQSLGL 260          
BLAST of mRNA_M-pyrifera_M_contig89061.20650.1 vs. uniprot
Match: A0A356EQ31_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A356EQ31_9PLAN)

HSP 1 Score: 193 bits (491), Expect = 6.230e-55
Identity = 116/268 (43.28%), Postives = 150/268 (55.97%), Query Frame = 1
Query:    1 DHYSALFKIGTMEPLIGGPPFVRALEEMVKLYGSDSEQVEQLSPDEVRQRFWNGQCALAIGWPSSAATDLHSDPSYKTEAKQDQPVEADFCAFPAAREVFNPGQQEWGARADDDSGTVPLVAIEGRLASICADSDHKKAALALIAALSGREWGTTVFARSPATTLYRNSQRRDVVAWIEPPVSAAAANSYAELVVDMFSGSEAITALRIPGRERYLAALSTAVTDALAGKDSPQVLLKRVAAKWEEITIELGSDRQRLAYQRSLGLMP 804
            D+YS  FK+ TMEPLI GPP VRAL +MV      S    + +PD+VR  FW G+C LA+ WP+ AA  L ++    T+A   + + A     P +RE FN  +  W  R   D  +VPL+A  GR+  +   SDH  A+  L+  LS       + ARSP TTLYR+ Q      W+E P+  A A+ YA+     F   +   ALRIPGR+ YLAAL  AV  AL G+  P   L + A KW EIT  LG ++QR AYQRSLGL P
Sbjct:  232 DNYSTWFKVDTMEPLISGPPVVRALVQMVTAAKHGSAAQFEANPDDVRAAFWRGECGLALTWPT-AAVPLDAE----TQAAGSK-IAAGVVELPGSREHFNIDEGAWQRRDSGDDLSVPLLATSGRMGVVFERSDHPAASAQLLLWLSALSTDPPLSARSPWTTLYRHGQTTLSENWVEKPMGQALADEYAKQTEATFERQQWAFALRIPGRKEYLAALDEAVLAALRGERPPAAALYQAAEKWREITQRLGVEQQRTAYQRSLGLEP 493          
BLAST of mRNA_M-pyrifera_M_contig89061.20650.1 vs. uniprot
Match: A0A3E0NQS8_9BACT (Extracellular solute-binding protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0NQS8_9BACT)

HSP 1 Score: 194 bits (493), Expect = 7.590e-55
Identity = 117/268 (43.66%), Postives = 151/268 (56.34%), Query Frame = 1
Query:    1 DHYSALFKIGTMEPLIGGPPFVRALEEMVKLYGSDSEQVEQLSPDEVRQRFWNGQCALAIGWPSSAATDLHSDPSYKTEAKQDQPVEADFCAFPAAREVFNPGQQEWGARADDDSGTVPLVAIEGRLASICADSDHKKAALALIAALSGREWGTTVFARSPATTLYRNSQRRDVVAWIEPPVSAAAANSYAELVVDMFSGSEAITALRIPGRERYLAALSTAVTDALAGKDSPQVLLKRVAAKWEEITIELGSDRQRLAYQRSLGLMP 804
            DHYS LF I TMEPL+ GP FVRALEE++       E   ++     R+ F  G+  LA+ WP  A  +       + +   D P    F   P +  V+N  Q+ W  R  D+ G VPLV + GRL SI A+S+    A  L+A LSGREWGT V + SPATTLYR SQ R    W++P   +A+A  YA  V D  S  E + A RIPG  +Y+AAL TAV +A+ G       L+  AA+W+ IT ELG D Q+ AY+ SLGL P
Sbjct:  280 DHYSTLFNIVTMEPLVAGPGFVRALEELIADAKLGPENQLEMDAAAARKEFLAGRAGLALTWPGHAELE-------RADEGPDPPPTG-FAELPGSVAVYNFAQRAWDER--DELGRVPLVGLAGRLGSITANSEVPGEAFDLLAWLSGREWGTQVSSASPATTLYRRSQIRKPQPWLDPNTDSASAEQYATSVYDAMSRLEYLLAPRIPGAAQYMAALDTAVREAVRGDKPAGEALEAAAAEWKRITEELGLDAQQQAYRLSLGLEP 537          
BLAST of mRNA_M-pyrifera_M_contig89061.20650.1 vs. uniprot
Match: A0A7X7IQK7_9BACT (Extracellular solute-binding protein n=1 Tax=Pirellulaceae bacterium TaxID=2699754 RepID=A0A7X7IQK7_9BACT)

HSP 1 Score: 191 bits (484), Expect = 4.680e-54
Identity = 115/268 (42.91%), Postives = 146/268 (54.48%), Query Frame = 1
Query:    1 DHYSALFKIGTMEPLIGGPPFVRALEEMVKLYGSDSEQVEQLSPDEVRQRFWNGQCALAIGWPSSAATDLHSDPSYKTEAKQDQPVEADFCAFPAAREVFNPGQQEWGARADDDSGTVPLVAIEGRLASICADSDHKKAALALIAALSGREWGTTVFARSPATTLYRNSQRRDVVAWIEPPVSAAAANSYAELVVDMFSGSEAITALRIPGRERYLAALSTAVTDALAGKDSPQVLLKRVAAKWEEITIELGSDRQRLAYQRSLGLMP 804
            D+YS  FK+ TMEPLI GPP VRAL +MV      S    +  PD+VR  FW G+C LA+ WP+ AA  L ++    TEA   + + A     P +RE FN  ++ W  R   D   VPL+A  GR+  +    DH  A+  L+  LS       + ARSP TTLYR  Q      W+E P++ A A+ YA+     F   +   ALRIPGR+ YLAAL  AV  AL G+  P   L + A KW E T  LG  +QR AYQRSLGL P
Sbjct:  215 DNYSTWFKVDTMEPLINGPPVVRALVQMVTAAKYGSATQFEADPDDVRAAFWRGECGLALTWPT-AAVPLDAE----TEAVGSK-IAAGVVELPGSREHFNIDERAWQKRDSGDEVGVPLLATSGRMGVVFDRGDHPAASAQLLLWLSALSTDPPLSARSPWTTLYRRGQTSLSENWVEKPMNQAVADEYAKQTEATFERQQWAFALRIPGRQEYLAALDEAVLAALRGESPPAAALYQAAEKWRETTQRLGVQQQRTAYQRSLGLEP 476          
BLAST of mRNA_M-pyrifera_M_contig89061.20650.1 vs. uniprot
Match: A0A5Q4GG33_9PLAN (Extracellular solute-binding protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A5Q4GG33_9PLAN)

HSP 1 Score: 187 bits (476), Expect = 1.720e-52
Identity = 113/268 (42.16%), Postives = 152/268 (56.72%), Query Frame = 1
Query:    1 DHYSALFKIGTMEPLIGGPPFVRALEEMVKLYGSDSEQVEQLSPDEVRQRFWNGQCALAIGWPSSAATDLHSDPSYKTEAKQDQPVEADFCAFPAAREVFNPGQQEWGARADDDSGTVPLVAIEGRLASICADSDHKKAALALIAALSGREWGTTVFARSPATTLYRNSQRRDVVAWIEPPVSAAAANSYAELVVDMFSGSEAITALRIPGRERYLAALSTAVTDALAGKDSPQVLLKRVAAKWEEITIELGSDRQRLAYQRSLGLMP 804
            ++YS LF   TMEPLI GPPFVRALEE+V ++   S ++    P + R+    G+CA+AI WPS       SD S         P+ A     P +REVFN G Q+W  R+  + G   L+ + GR+ ++ + S   +AAL L+ +LS  +W   V   S +T LYR+SQ     +W+ P    A   SY ELV D+   S  +T+LRIPGR RYL  L  AV  A+AG  +P   L+ VA +W EIT ELG + QR AY RSLG+ P
Sbjct:  263 NYYSTLFDSRTMEPLIAGPPFVRALEELVAVHQGQSSEMLAFGPADARRELIAGRCAMAITWPSRVEDRGESDASTGL-----LPLAA--AELPGSREVFNLGDQKWHPRSRTEDGRATLLGVAGRIGAVSSFSRQPQAALNLLVSLSSTDWSEQVSPFSESTGLYRSSQIPLASSWLGPDFETA--RSYGELVRDIHRRSLWLTSLRIPGRSRYLTELDKAVQAAVAGDLAPAEALESVADQWREITEELGIETQRTAYWRSLGMEP 521          
BLAST of mRNA_M-pyrifera_M_contig89061.20650.1 vs. uniprot
Match: A0A2E8D8J0_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8D8J0_9PLAN)

HSP 1 Score: 174 bits (440), Expect = 2.900e-47
Identity = 102/268 (38.06%), Postives = 151/268 (56.34%), Query Frame = 1
Query:    1 DHYSALFKIGTMEPLIGGPPFVRALEEMVKLYGSDSEQVEQLSPDEVRQRFWNGQCALAIGWPSSAATDLHSDPSYKTEAKQDQPVEADFCAFPAAREVFNPGQQEWGARADDDSGTVPLVAIEGRLASICADSDHKKAALALIAALSGREWGTTVFARSPATTLYRNSQRRDVVAWIEPPVSAAAANSYAELVVDMFSGSEAITALRIPGRERYLAALSTAVTDALAGKDSPQVLLKRVAAKWEEITIELGSDRQRLAYQRSLGLMP 804
            + YS LF  G+MEPLI GPPFVRALEE++    +  +    LSP E R+ F  GQ A+A+ WPS A      D S +  ++ ++ +       P ARE ++     W    ++DSG   L+A  GRL S+  D   K+ A+A++  L+G E G+TV  +S  TT+ R  Q     +W++  +  + A  YAE V    + +  + A+R+PGR++YL AL+ AV  A+AG  +    L+  + +W EIT ELGS+ QR AY R+L L P
Sbjct:  261 NQYSTLFDFGSMEPLIAGPPFVRALEELI---AAAKQGAPSLSPTEARRIFLAGQAAMALTWPSRAG-----DVSAERASELEEWI--GIVELPGAREAYSLRSDSWEQLQENDSGRATLLAASGRLGSVTDDCRQKQQAIAMLLLLTGEELGSTVSVQSKFTTMARTDQLASASSWVDRELEGSPARMYAEAVEAAQNRAAWVDAVRLPGRDKYLTALNGAVDRAIAGDATAAKALEVSSTRWVEITEELGSESQRTAYVRNLSLKP 518          
BLAST of mRNA_M-pyrifera_M_contig89061.20650.1 vs. uniprot
Match: A0A7C3WLH4_9BACT (Extracellular solute-binding protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C3WLH4_9BACT)

HSP 1 Score: 174 bits (440), Expect = 4.680e-47
Identity = 99/269 (36.80%), Postives = 145/269 (53.90%), Query Frame = 1
Query:    1 DHYSALFKIGTMEPLIGGPPFVRALEEMVKLYGSDSEQVEQLSPDEVRQRFWNGQCALAIGWPSSAATDLHSDPSYKTEAKQDQPVEADFCAFPAAREVFNPGQQEWGARADDDSGTVPLVAIEGRLASICADSDHKKAALALIAALSGREWGTTVFARSPATTLYRNSQRRDVV---AWIEPPVSAAAANSYAELVVDMFSGSEAITALRIPGRERYLAALSTAVTDALAGKDSPQVLLKRVAAKWEEITIELGSDRQRLAYQRSLGL 798
            ++YS LF++ +M P I  PPF+RALEE+V      S    ++ PD+VR+RFW G+C LA+ WPS A  D           K    V+      P A  +++PG+ +W      +    PL+ I GR A++     H +AAL LI  L G++      A  PAT ++R S  +D+    AW+EP +    A  YA+ + + FS  + + ALRIPG + Y+  L  AV  A+ G+ +PQ  L+  A KW+ IT  LG   QR AY+R+L L
Sbjct:  288 NYYSTLFEMESMRPRIADPPFLRALEELVSTAKWASPDFWEMDPDQVRERFWRGECGLALCWPSRAGPD-----------KAAPEVKCTIVPIPGASALWHPGEGKWVPAPKGELFGTPLLGISGRWAALHTHCQHPEAALELIFWLVGKQGTEPRPAVCPATAVFRKSDLKDLPRLQAWVEPAMPRQTAQQYADALQETFSSGQWLVALRIPGWQEYMGVLDEAVRAAVRGQQTPQQALQEAAEKWQAITHRLGLQHQRQAYRRNLAL 545          
BLAST of mRNA_M-pyrifera_M_contig89061.20650.1 vs. uniprot
Match: A0A7X7KDH1_9BACT (Extracellular solute-binding protein (Fragment) n=1 Tax=Pirellulaceae bacterium TaxID=2699754 RepID=A0A7X7KDH1_9BACT)

HSP 1 Score: 167 bits (424), Expect = 3.570e-45
Identity = 99/270 (36.67%), Postives = 136/270 (50.37%), Query Frame = 1
Query:    4 HYSALFKIGTMEPLIGGPPFVRALEEMVKLYGSDSEQVEQLSPDEVRQRFWNGQCALAIGWPSSAATDLHS---------------DPSYKTEAKQD--------QPVEADFCAFPAAREVFNPGQQEWGARADDDSGTVPLVAIEGRLASICADSDHKKAALALIAALSGREWGTTVFARSPATTLYRNSQRRDVVAWIEPPVSAAAANSYAELVVDMFSGSEAITALRIPGRERYLAALSTAVTDALAGKDSPQVLLKRVAAKWEEIT 744
            +YS LF I TMEPLI GPPFV ALEE+            +L P  VR+ FWNG+C LA+ WP+ AA    +               +   +TE   D        +P+   F   P +  V+N  ++ WG RA+D    V L+A+ GRL  +   ++++ AA  L+  LS         A SPA T++R++ R     W+E  V  AAA  Y       F+  + + ALRIPGR  YLAAL  AV  AL G+  P+  L++ A KW EIT
Sbjct:  218 NYSTLFNIDTMEPLIAGPPFVEALEELAAAAKLSRGDPPRLDPAGVRKAFWNGRCGLAVTWPTGAAEGKEARGKGRGERGEEKKLREEGRETEGTDDSATAESPGEPIRVGFAELPGSPRVYNVSEKAWGKRAEDADHRVSLLAVAGRLGVVSNQTENQPAAFKLLLWLSDDRMSVQTSALSPAATMFRHAHRDAPGLWVEETVPHAAAVEYGAAAAAAFAHEQWLAALRIPGRAEYLAALDEAVAAALDGRSPPKDALEQAAQKWREIT 487          
BLAST of mRNA_M-pyrifera_M_contig89061.20650.1 vs. uniprot
Match: A0A832CRN2_9BACT (Extracellular solute-binding protein n=1 Tax=Planctomycetales bacterium TaxID=2053591 RepID=A0A832CRN2_9BACT)

HSP 1 Score: 167 bits (423), Expect = 1.180e-44
Identity = 98/267 (36.70%), Postives = 137/267 (51.31%), Query Frame = 1
Query:    1 DHYSALFKIGTMEPLIGGPPFVRALEEMVKLYGSDSEQVEQLSPDEVRQRFWNGQCALAIGWPSSAATDLHSDPSYKTEAKQDQPVEADFCAFPAAREVFNPGQQEWGARADDDSGTVPLVAIEGRLASICADSDHKKAALALIAALSGREWGTTVFARSPATTLYRNSQRRDVVAWIEPPVSAAAANSYAELVVDMFSGSEAITALRIPGRERYLAALSTAVTDALAGKDSPQVLLKRVAAKWEEITIELGSDRQRLAYQRSLGLM 801
            D YS LF + +++PL+ GPPFV+AL E+  L G   ++  QL+P E  Q    G+C L +GWP   +    S P        + PV+  F   P A   FN   +EW AR   +S  V L+  EGRL S      H +AA   +  LSG  W   V   S A TL+R +  R    WI+  +   AA SY  ++    +    + A R+PG +RYLAAL  AV   + G+  P+  L+  A +W++IT EL   RQ+ AY  SLGL+
Sbjct:  278 DQYSDLFDLDSLDPLVAGPPFVKALTELSALAGPGRDRNLQLTPTEAFQAICRGECVLTLGWPVPVSARGTSSPL-------EVPVDLQFAEAPGADAAFNRDTREWDARTPTESPHVTLLGAEGRLGSAIKGRPHSQAAWEFLLWLSGPRWSERVSTSSAAATLFREAHLRSPGPWIDE-LRPTAARSYGHVLQQSLTQRPVLLAPRLPGADRYLAALDRAVRAVVIGERKPREALRATAEEWKQITAELDIARQKRAYHASLGLL 536          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89061.20650.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7V4HV31_9BACT5.480e-6143.80Extracellular solute-binding protein n=1 Tax=Planc... [more]
A0A1G2Z815_9BACT4.430e-5540.38Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A356EQ31_9PLAN6.230e-5543.28Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
A0A3E0NQS8_9BACT7.590e-5543.66Extracellular solute-binding protein n=1 Tax=Planc... [more]
A0A7X7IQK7_9BACT4.680e-5442.91Extracellular solute-binding protein n=1 Tax=Pirel... [more]
A0A5Q4GG33_9PLAN1.720e-5242.16Extracellular solute-binding protein n=1 Tax=Planc... [more]
A0A2E8D8J0_9PLAN2.900e-4738.06Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
A0A7C3WLH4_9BACT4.680e-4736.80Extracellular solute-binding protein n=1 Tax=Planc... [more]
A0A7X7KDH1_9BACT3.570e-4536.67Extracellular solute-binding protein (Fragment) n=... [more]
A0A832CRN2_9BACT1.180e-4436.70Extracellular solute-binding protein n=1 Tax=Planc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89061contigM-pyrifera_M_contig89061:2..808 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score139.0
Seed ortholog evalue3.2e-30
Seed eggNOG ortholog314230.DSM3645_01911
KEGG koko:K02027
KEGG TC3.A.1.1
KEGG ModuleM00207
Hectar predicted targeting categoryother localisation
EggNOG free text desc.solute-binding protein
EggNOG OGs2J1FH@203682,COG1653@1,COG1653@2
COG Functional cat.G
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00002,ko02000
Exons1
Model size807
Cds size807
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816800.3489301-CDS-M-pyrifera_M_contig89061:1..8081622816800.3489301-CDS-M-pyrifera_M_contig89061:1..808Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89061 2..808 +
1692278186.313287-CDS-M-pyrifera_M_contig89061:1..8081692278186.313287-CDS-M-pyrifera_M_contig89061:1..808Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89061 2..808 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89061.20650.1prot_M-pyrifera_M_contig89061.20650.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig89061 2..808 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig89061.20650.1

>prot_M-pyrifera_M_contig89061.20650.1 ID=prot_M-pyrifera_M_contig89061.20650.1|Name=mRNA_M-pyrifera_M_contig89061.20650.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=269bp
DHYSALFKIGTMEPLIGGPPFVRALEEMVKLYGSDSEQVEQLSPDEVRQR
FWNGQCALAIGWPSSAATDLHSDPSYKTEAKQDQPVEADFCAFPAAREVF
NPGQQEWGARADDDSGTVPLVAIEGRLASICADSDHKKAALALIAALSGR
EWGTTVFARSPATTLYRNSQRRDVVAWIEPPVSAAAANSYAELVVDMFSG
SEAITALRIPGRERYLAALSTAVTDALAGKDSPQVLLKRVAAKWEEITIE
LGSDRQRLAYQRSLGLMP*
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mRNA from alignment at M-pyrifera_M_contig89061:2..808+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig89061.20650.1 ID=mRNA_M-pyrifera_M_contig89061.20650.1|Name=mRNA_M-pyrifera_M_contig89061.20650.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=807bp|location=Sequence derived from alignment at M-pyrifera_M_contig89061:2..808+ (Macrocystis pyrifera P11B4 male)
GACCATTACTCGGCACTGTTCAAAATCGGCACGATGGAACCGCTGATCGG CGGGCCTCCGTTCGTTCGTGCCTTGGAAGAGATGGTGAAGCTCTACGGAT CGGATTCCGAGCAGGTCGAACAACTCTCTCCCGACGAAGTTCGGCAGCGT TTTTGGAACGGCCAATGTGCCTTGGCCATCGGCTGGCCTTCGTCCGCGGC CACGGACCTCCATTCAGACCCGAGCTACAAAACTGAAGCAAAGCAAGACC AACCCGTCGAGGCCGACTTCTGTGCGTTTCCCGCGGCTCGTGAAGTATTC AACCCTGGTCAGCAGGAATGGGGAGCTCGGGCCGACGACGATTCCGGCAC TGTTCCCCTAGTGGCCATCGAGGGTCGTCTGGCTTCAATCTGTGCTGACA GCGATCACAAGAAGGCCGCGTTGGCACTCATCGCGGCGCTTTCTGGGCGC GAATGGGGAACCACGGTCTTTGCAAGGAGTCCGGCGACGACCTTATACCG GAACTCGCAACGCAGGGACGTTGTCGCCTGGATCGAGCCACCTGTTTCGG CGGCCGCGGCCAACTCCTATGCTGAGTTGGTGGTCGACATGTTCAGTGGC AGCGAGGCAATCACCGCCCTGCGAATTCCCGGACGGGAACGCTATCTTGC CGCCTTGAGTACGGCGGTAACTGACGCCCTGGCAGGTAAGGATTCTCCCC AAGTGCTGCTCAAACGGGTGGCTGCAAAATGGGAAGAAATCACCATCGAA CTGGGGTCCGACCGCCAGCGACTTGCCTATCAGCGGAGCTTAGGGCTCAT GCCGTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig89061:2..808+

>mRNA_M-pyrifera_M_contig89061.20650.1 ID=mRNA_M-pyrifera_M_contig89061.20650.1|Name=mRNA_M-pyrifera_M_contig89061.20650.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1614bp|location=Sequence derived from alignment at M-pyrifera_M_contig89061:2..808+ (Macrocystis pyrifera P11B4 male)
GACCATTACTCGGCACTGTTCAAAATCGGCACGATGGAACCGCTGATCGG
CGGGCCTCCGTTCGTTCGTGCCTTGGAAGAGATGGTGAAGCTCTACGGAT
CGGATTCCGAGCAGGTCGAACAACTCTCTCCCGACGAAGTTCGGCAGCGT
TTTTGGAACGGCCAATGTGCCTTGGCCATCGGCTGGCCTTCGTCCGCGGC
CACGGACCTCCATTCAGACCCGAGCTACAAAACTGAAGCAAAGCAAGACC
AACCCGTCGAGGCCGACTTCTGTGCGTTTCCCGCGGCTCGTGAAGTATTC
AACCCTGGTCAGCAGGAATGGGGAGCTCGGGCCGACGACGATTCCGGCAC
TGTTCCCCTAGTGGCCATCGAGGGTCGTCTGGCTTCAATCTGTGCTGACA
GCGATCACAAGAAGGCCGCGTTGGCACTCATCGCGGCGCTTTCTGGGCGC
GAATGGGGAACCACGGTCTTTGCAAGGAGTCCGGCGACGACCTTATACCG
GAACTCGCAACGCAGGGACGTTGTCGCCTGGATCGAGCCACCTGTTTCGG
CGGCCGCGGCCAACTCCTATGCTGAGTTGGTGGTCGACATGTTCAGTGGC
AGCGAGGCAATCACCGCCCTGCGAATTCCCGGACGGGAACGCTATCTTGC
CGCCTTGAGTACGGCGGTAACTGACGCCCTGGCAGGTAAGGATTCTCCCC
AAGTGCTGCTCAAACGGGTGGCTGCAAAATGGGAAGAAATCACCATCGAA
CTGGGGTCCGACCGCCAGCGACTTGCCTATCAGCGGAGCTTAGGGCTCAT
GCCGTAGGACCATTACTCGGCACTGTTCAAAATCGGCACGATGGAACCGC
TGATCGGCGGGCCTCCGTTCGTTCGTGCCTTGGAAGAGATGGTGAAGCTC
TACGGATCGGATTCCGAGCAGGTCGAACAACTCTCTCCCGACGAAGTTCG
GCAGCGTTTTTGGAACGGCCAATGTGCCTTGGCCATCGGCTGGCCTTCGT
CCGCGGCCACGGACCTCCATTCAGACCCGAGCTACAAAACTGAAGCAAAG
CAAGACCAACCCGTCGAGGCCGACTTCTGTGCGTTTCCCGCGGCTCGTGA
AGTATTCAACCCTGGTCAGCAGGAATGGGGAGCTCGGGCCGACGACGATT
CCGGCACTGTTCCCCTAGTGGCCATCGAGGGTCGTCTGGCTTCAATCTGT
GCTGACAGCGATCACAAGAAGGCCGCGTTGGCACTCATCGCGGCGCTTTC
TGGGCGCGAATGGGGAACCACGGTCTTTGCAAGGAGTCCGGCGACGACCT
TATACCGGAACTCGCAACGCAGGGACGTTGTCGCCTGGATCGAGCCACCT
GTTTCGGCGGCCGCGGCCAACTCCTATGCTGAGTTGGTGGTCGACATGTT
CAGTGGCAGCGAGGCAATCACCGCCCTGCGAATTCCCGGACGGGAACGCT
ATCTTGCCGCCTTGAGTACGGCGGTAACTGACGCCCTGGCAGGTAAGGAT
TCTCCCCAAGTGCTGCTCAAACGGGTGGCTGCAAAATGGGAAGAAATCAC
CATCGAACTGGGGTCCGACCGCCAGCGACTTGCCTATCAGCGGAGCTTAG
GGCTCATGCCGTAG
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