mRNA_M-pyrifera_M_contig89059.20649.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig89059.20649.1
Unique NamemRNA_M-pyrifera_M_contig89059.20649.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig89059.20649.1 vs. uniprot
Match: A0A2E7K917_9PLAN (Uncharacterized protein n=3 Tax=Gimesia TaxID=1649453 RepID=A0A2E7K917_9PLAN)

HSP 1 Score: 536 bits (1381), Expect = 4.930e-191
Identity = 260/270 (96.30%), Postives = 261/270 (96.67%), Query Frame = 1
Query:    1 QALINKLEQNEAFYSELKLNLHENYQQPPGNTRPTWKVENETEYSILVQGEKFRQDETTAGKFRLVPSPPQKNQRHFVEGMNTTLTLFDGTTYRRFHEIDHESARAVGQRNQNKLGEISDLPKRMENYGRPHMLLESSPHVPLSIFLSGKKAMVHFPGLPVHPKPFQVKAWIEGTGEIQGLKCTQVVVERLNDSGVRFSKQILWLAQERNLIPVKIVTYYDQFSREKPIKEAFVDEWQQLGAGVWFPRQAHIDRYNLILFKYNGSYEIDW 810
            QALINKLEQ EAFYSELKL LHENYQQPPGNTRP WKVENET YSILVQGEKFRQ+ETTAGKFRLVPSPPQKNQRHFVEGMNTTLTLFDGTTYRRFHE DHES RAVGQRNQNKLGEISDLPKRMENYGRPHMLLESSPHVPLSIFLSGKKAMVHFPGLPVHPKPFQVKAWIEGTGEIQGLKCTQVVVERLNDSGVRFSKQILWLAQERNLIPVKIVTYYDQFSREKPIKEAFVDEWQQLGAGVWFP QAHID YNL LFKYNGSYEIDW
Sbjct:   43 QALINKLEQQEAFYSELKLKLHENYQQPPGNTRPKWKVENETGYSILVQGEKFRQEETTAGKFRLVPSPPQKNQRHFVEGMNTTLTLFDGTTYRRFHEFDHESPRAVGQRNQNKLGEISDLPKRMENYGRPHMLLESSPHVPLSIFLSGKKAMVHFPGLPVHPKPFQVKAWIEGTGEIQGLKCTQVVVERLNDSGVRFSKQILWLAQERNLIPVKIVTYYDQFSREKPIKEAFVDEWQQLGAGVWFPSQAHIDHYNLFLFKYNGSYEIDW 312          
BLAST of mRNA_M-pyrifera_M_contig89059.20649.1 vs. uniprot
Match: A0A517WFT9_9PLAN (Uncharacterized protein n=2 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517WFT9_9PLAN)

HSP 1 Score: 523 bits (1346), Expect = 9.810e-186
Identity = 254/270 (94.07%), Postives = 259/270 (95.93%), Query Frame = 1
Query:    1 QALINKLEQNEAFYSELKLNLHENYQQPPGNTRPTWKVENETEYSILVQGEKFRQDETTAGKFRLVPSPPQKNQRHFVEGMNTTLTLFDGTTYRRFHEIDHESARAVGQRNQNKLGEISDLPKRMENYGRPHMLLESSPHVPLSIFLSGKKAMVHFPGLPVHPKPFQVKAWIEGTGEIQGLKCTQVVVERLNDSGVRFSKQILWLAQERNLIPVKIVTYYDQFSREKPIKEAFVDEWQQLGAGVWFPRQAHIDRYNLILFKYNGSYEIDW 810
            QALI ++EQ EAFYSELKLNLHENYQQPPGN RPTWKVENETEYSILVQGEKFRQ+ETTAGKFRL    PQ NQRHF+EGMNTTLTLFDGTTYRRFHEIDHES  AVGQRNQNKLGEISDLPKRMENYGRPHMLLESSPHVPLSIFLSGKKAMVH+PGLPV PKPFQVKAWIEGTGEIQGLKCTQVVVERLNDSGVRFSKQILWLAQERNLIPVKIVTYYDQFSREKPIKEAFVDEWQQLGAGVWFPRQAHIDRYNLILFKYNGSYEIDW
Sbjct:   41 QALIREVEQQEAFYSELKLNLHENYQQPPGNARPTWKVENETEYSILVQGEKFRQEETTAGKFRLHTQNPQNNQRHFLEGMNTTLTLFDGTTYRRFHEIDHESPLAVGQRNQNKLGEISDLPKRMENYGRPHMLLESSPHVPLSIFLSGKKAMVHYPGLPVDPKPFQVKAWIEGTGEIQGLKCTQVVVERLNDSGVRFSKQILWLAQERNLIPVKIVTYYDQFSREKPIKEAFVDEWQQLGAGVWFPRQAHIDRYNLILFKYNGSYEIDW 310          
BLAST of mRNA_M-pyrifera_M_contig89059.20649.1 vs. uniprot
Match: A0A6I6AI48_9PLAN (Outer membrane lipoprotein-sorting protein n=1 Tax=Gimesia benthica TaxID=2608982 RepID=A0A6I6AI48_9PLAN)

HSP 1 Score: 514 bits (1325), Expect = 1.660e-182
Identity = 246/270 (91.11%), Postives = 258/270 (95.56%), Query Frame = 1
Query:    1 QALINKLEQNEAFYSELKLNLHENYQQPPGNTRPTWKVENETEYSILVQGEKFRQDETTAGKFRLVPSPPQKNQRHFVEGMNTTLTLFDGTTYRRFHEIDHESARAVGQRNQNKLGEISDLPKRMENYGRPHMLLESSPHVPLSIFLSGKKAMVHFPGLPVHPKPFQVKAWIEGTGEIQGLKCTQVVVERLNDSGVRFSKQILWLAQERNLIPVKIVTYYDQFSREKPIKEAFVDEWQQLGAGVWFPRQAHIDRYNLILFKYNGSYEIDW 810
            QALIN+LEQ EAFYSEL+L LHENYQQPPGNTRPTWKVENETEYSIL+QGEKFRQ+ETTAG FRL+   P+KNQRHF+EGMNTTLTLFDGTTYRRFHE DHES RAVGQRNQNKLGEISDLPKRMENYGRPHMLLESSPHVPLSIFLSGKKAMVHFPGLP HPKPFQVKAWIEGTGEIQGLKCTQVVVERLNDSGVRFSKQILWLAQERNLIPVKI+TY+D+FSREKP KEAFVD+WQQLG GVWFP QAHIDRYNLILFKYNG+YEIDW
Sbjct:   43 QALINELEQQEAFYSELELKLHENYQQPPGNTRPTWKVENETEYSILLQGEKFRQEETTAGNFRLLTQKPRKNQRHFLEGMNTTLTLFDGTTYRRFHEFDHESPRAVGQRNQNKLGEISDLPKRMENYGRPHMLLESSPHVPLSIFLSGKKAMVHFPGLPAHPKPFQVKAWIEGTGEIQGLKCTQVVVERLNDSGVRFSKQILWLAQERNLIPVKIITYHDRFSREKPCKEAFVDKWQQLGPGVWFPLQAHIDRYNLILFKYNGTYEIDW 312          
BLAST of mRNA_M-pyrifera_M_contig89059.20649.1 vs. uniprot
Match: A0A813BF81_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A813BF81_SYMMI)

HSP 1 Score: 518 bits (1334), Expect = 1.720e-180
Identity = 250/270 (92.59%), Postives = 258/270 (95.56%), Query Frame = 1
Query:    1 QALINKLEQNEAFYSELKLNLHENYQQPPGNTRPTWKVENETEYSILVQGEKFRQDETTAGKFRLVPSPPQKNQRHFVEGMNTTLTLFDGTTYRRFHEIDHESARAVGQRNQNKLGEISDLPKRMENYGRPHMLLESSPHVPLSIFLSGKKAMVHFPGLPVHPKPFQVKAWIEGTGEIQGLKCTQVVVERLNDSGVRFSKQILWLAQERNLIPVKIVTYYDQFSREKPIKEAFVDEWQQLGAGVWFPRQAHIDRYNLILFKYNGSYEIDW 810
            QALI++LEQNEAFY+ELKL LHENYQQPPGN RPTWKVENETEYSILVQGEKFRQ+E TAGKFRL    PQ NQRHF+EGMNTTLTLFDGTTYRRFHEIDHES  AVGQRNQNKLGEISDLPKRMENYGRPHMLLESSPHVPLSIFLSGKKAM+H+PGLPVHPKPFQVKAWIEGTGEIQGLKCTQVVVERLNDSGVRFSKQILWLAQERNLIPVKIVTY+DQFSREKPIKEAFVDEWQQLGAGVWFP QAHIDRYNL LFKYNGSYEIDW
Sbjct:   26 QALISELEQNEAFYTELKLKLHENYQQPPGNARPTWKVENETEYSILVQGEKFRQEEITAGKFRLHTQNPQNNQRHFLEGMNTTLTLFDGTTYRRFHEIDHESPLAVGQRNQNKLGEISDLPKRMENYGRPHMLLESSPHVPLSIFLSGKKAMIHYPGLPVHPKPFQVKAWIEGTGEIQGLKCTQVVVERLNDSGVRFSKQILWLAQERNLIPVKIVTYHDQFSREKPIKEAFVDEWQQLGAGVWFPSQAHIDRYNLFLFKYNGSYEIDW 295          
BLAST of mRNA_M-pyrifera_M_contig89059.20649.1 vs. uniprot
Match: A0A517QA59_9PLAN (Uncharacterized protein n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517QA59_9PLAN)

HSP 1 Score: 399 bits (1025), Expect = 8.040e-137
Identity = 185/271 (68.27%), Postives = 232/271 (85.61%), Query Frame = 1
Query:    1 QALINKLEQNEAFYSELKLNLHENYQQPPGNTRPTWKVENETEYSILVQGEKFRQDETTAGKFRLVPSPPQKNQRHFVEGMNTTLTLFDGTTYRRFHEIDHESARAVGQRNQNKLGEISDLPKRMENYGRPHMLLESS-PHVPLSIFLSGKKAMVHFPGLPVHPKPFQVKAWIEGTGEIQGLKCTQVVVERLNDSGVRFSKQILWLAQERNLIPVKIVTYYDQFSREKPIKEAFVDEWQQLGAGVWFPRQAHIDRYNLILFKYNGSYEIDW 810
            Q LI +LE+NEA Y +L+L L E Y+QPPGN  P WKVEN TEYSILVQG+KFR++ET AG+FR++P   QKNQ+ F+EG ++TL++FDGTTYRRF+E D+ES  A G+R Q+K GE+SDLPKR++N+ RPHMLL+   P+VPLS +LSG+KAMV++PGLP +P+PFQVK  IEGTGEIQGLKCT+VV+E+LNDS VRF+KQILWLA ERNLIPVKI+TY DQ S EKPI+EAF+DEWQ+LG GVWFP++AHID YN +L+KYNG+YE+DW
Sbjct:   45 QNLIRELERNEALYQDLELKLQERYEQPPGNAHPKWKVENRTEYSILVQGQKFREEETKAGQFRVMPQRNQKNQKFFIEGRDSTLSMFDGTTYRRFNETDYESVLAGGKRTQSKRGEVSDLPKRLDNFARPHMLLQLRYPYVPLSNYLSGQKAMVNYPGLPPYPQPFQVKVQIEGTGEIQGLKCTKVVIEQLNDSDVRFAKQILWLAHERNLIPVKIITYRDQLSEEKPIEEAFIDEWQELGTGVWFPQKAHIDHYNFVLYKYNGTYELDW 315          
BLAST of mRNA_M-pyrifera_M_contig89059.20649.1 vs. uniprot
Match: A0A355GII6_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A355GII6_9PLAN)

HSP 1 Score: 201 bits (510), Expect = 3.200e-59
Identity = 111/272 (40.81%), Postives = 157/272 (57.72%), Query Frame = 1
Query:    1 QALINKLEQNEAFYSELKLNLHENYQQPPGNTRPTWKVENETEYSILVQGEKFRQDETTAGKFRL-VPSPPQKNQRHFVEGMNTTLTLFDGTTYRRFHEIDHESARAVGQRNQNKLGEISDLPKRMENYGRPHMLL-ESSPHVPLSIFLSGKKAMVHFPGLPVHPKPFQVKAWIEGTGEIQGLKCTQVVVERLNDSGVRFSKQILWLAQERNLIPVKIVTYYDQFSREKPIKEAFVDEWQQLGAGVWFPRQAHIDRYNLILFKYNGSYEIDW 810
            Q LI +LE+NEA Y  LKLNL   Y+Q PG      +   ++E +++VQG+K+RQ++ T G+F+     P  K    F  G   +  +FDG T R+F+  D        +R Q   G+IS   K MEN  RPHMLL E    VPLS +L G+ A+   PG P +   +  K  + G  EIQGL C ++ +E+ + +G   SK ILWLA++RNLIP + V Y    S+E P  EA+VDEWQ++  GVWFPR+ H DR N I+++     ++ W
Sbjct:   41 QTLIQELERNEALYRNLKLNLQMVYEQSPGQVDSDKRARQKSELTLIVQGDKYRQEKLTTGRFQQGFLYPTNKPYNRFSSGTTESSAVFDGETLRKFYRYDRTPGLTDEERQQGGHGDISGEQKCMENLFRPHMLLCEHEVRVPLSTWLKGRDAIAASPGWPNYNDGWSYKVQLLGEEEIQGLNCIKIRIEKFHMNGKLTSKTILWLARDRNLIPAQAVFYQPPRSKEIPQCEAWVDEWQEVRPGVWFPRKFHKDRLNWIIYRLKNKQQVGW 312          
BLAST of mRNA_M-pyrifera_M_contig89059.20649.1 vs. uniprot
Match: A0A2E7K925_9PLAN (Uncharacterized protein n=4 Tax=Gimesia TaxID=1649453 RepID=A0A2E7K925_9PLAN)

HSP 1 Score: 192 bits (489), Expect = 4.090e-56
Identity = 108/272 (39.71%), Postives = 154/272 (56.62%), Query Frame = 1
Query:    1 QALINKLEQNEAFYSELKLNLHENYQQPPGNTRPTWKVENETEYSILVQGEKFRQDETTAGKFRL-VPSPPQKNQRHFVEGMNTTLTLFDGTTYRRFHEIDHESARAVGQRNQNKLGEISDLPKRMENYGRPHMLLES-SPHVPLSIFLSGKKAMVHFPGLPVHPKPFQVKAWIEGTGEIQGLKCTQVVVERLNDSGVRFSKQILWLAQERNLIPVKIVTYYDQFSREKPIKEAFVDEWQQLGAGVWFPRQAHIDRYNLILFKYNGSYEIDW 810
            QALI ++EQ EA Y  LKL +   YQQP     P  +V+ ++E +++VQGEK+RQ++ T G+F      PP K   HF  G   +  ++DG T ++F   D +      +R     G+I+    RMEN  RPHMLL +  P VPLS +L G  A+   PGLP +         I G   +QGLKC +V ++R  +SG    + +LWLA+ERNL+PV+  TY    S E P  EA+VDEW ++  GVWFP++ H DR N I++      ++ W
Sbjct:   37 QALIREVEQQEALYRNLKLQMQLLYQQPLKPADPEKQVKLKSELTLIVQGEKYRQEKQTKGRFNQGYFVPPNKPYYHFSNGTQESCQIYDGETLQKFSHYDRDRGLTNDERQTGGYGDITHEQVRMENLLRPHMLLSNHGPRVPLSTWLKGTSAVAASPGLPNYDNRTAYTTEILGEETVQGLKCIKVQIDRRRNSGKSELRDVLWLARERNLLPVQAETYQLSRSAEIPQSEAWVDEWLEVRPGVWFPQKFHTDRLNWIIYVLKKKQQVGW 308          
BLAST of mRNA_M-pyrifera_M_contig89059.20649.1 vs. uniprot
Match: A0A518A9B0_9PLAN (Uncharacterized protein n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A9B0_9PLAN)

HSP 1 Score: 190 bits (482), Expect = 1.810e-55
Identity = 107/272 (39.34%), Postives = 148/272 (54.41%), Query Frame = 1
Query:    1 QALINKLEQNEAFYSELKLNLHENYQQPPGNTRPTWKVENETEYSILVQGEKFRQDETTAGKFRL-VPSPPQKNQRHFVEGMNTTLTLFDGTTYRRFHEIDHESARAVGQRNQNKLGEISDLPKRMENYGRPHM-LLESSPHVPLSIFLSGKKAMVHFPGLPVHPKPFQVKAWIEGTGEIQGLKCTQVVVERLNDSGVRFSKQILWLAQERNLIPVKIVTYYDQFSREKPIKEAFVDEWQQLGAGVWFPRQAHIDRYNLILFKYNGSYEIDW 810
            Q LI KLE NE  Y  LKL L   Y+ PP    P  +    ++ +++VQGE +RQ++ T G+FR     PP K   HF  G   T  ++DG T R+ H+ +H       +  +   G IS   +RM+N  RPHM LL   P +PLS +  G+ A++  PGLP +      +  + G  E Q LKC +V ++R    G  F + ILWLA+ERNLIP ++V Y    S+  P  EA VDEWQ+L  GVWFPR+ H DR N I +      ++ W
Sbjct:   37 QTLIKKLEHNEGLYRNLKLELL--YEHPPAPVDPDIQARQISDLTLIVQGENYRQEKETRGRFRQGYIVPPNKPYNHFNNGTQATSQVYDGETLRKLHQYEHSPGLTSDEGRKGGYGSISHEHERMDNLLRPHMMLLNRGPRIPLSTWFKGQPAIIDSPGLPNYNDGTTCQIQLLGEEEFQELKCLKVQIDRFR-KGKHFLRYILWLARERNLIPARVVIYQPNRSKTLPQSEALVDEWQELRPGVWFPRKFHQDRLNWIAYIKLHKEQVGW 305          
BLAST of mRNA_M-pyrifera_M_contig89059.20649.1 vs. uniprot
Match: UPI00118A22C8 (outer membrane lipoprotein-sorting protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=UPI00118A22C8)

HSP 1 Score: 189 bits (480), Expect = 9.030e-55
Identity = 105/272 (38.60%), Postives = 153/272 (56.25%), Query Frame = 1
Query:    1 QALINKLEQNEAFYSELKLNLHENYQQPPGNTRPTWKVENETEYSILVQGEKFRQDETTAGKFRLVPS-PPQKNQRHFVEGMNTTLTLFDGTTYRRFHEIDHESARAVGQRNQNKLGEISDLPKRMENYGRPHMLLES-SPHVPLSIFLSGKKAMVHFPGLPVHPKPFQVKAWIEGTGEIQGLKCTQVVVERLNDSGVRFSKQILWLAQERNLIPVKIVTYYDQFSREKPIKEAFVDEWQQLGAGVWFPRQAHIDRYNLILFKYNGSYEIDW 810
            Q LI  +EQ EA Y  LKL +   YQQP     P  +V+ ++E +++VQG+K+RQ++ T G+F+   S PP+K    +  G   +  ++DG T ++F   D +      +R     G+I+    RMEN  RPHMLL    P VPLS +L G  A+   PGLP +      KA I G   +QGLKC +V ++R  +S     + +LWLA+ERNL+PV+ VTY    S + P  E +VDEW ++  GVWFPR  H DR + I++      ++ W
Sbjct:   37 QTLIRDVEQQEALYRNLKLQMQLLYQQPLKPADPEKQVKLKSELTLIVQGDKYRQEKQTKGRFQQSYSIPPKKPYHQYSNGTQESCQVYDGETLQKFSHYDRDRGLTTDERQTGGYGDITHEQVRMENLLRPHMLLSYYGPRVPLSTWLKGTAAVAESPGLPNYNNGSSYKADILGEETVQGLKCIKVQIDRRRNSSKSEHRDVLWLARERNLLPVQAVTYQFSRSTDIPQSETWVDEWLEVRPGVWFPRTFHTDRLDWIMYVLKKKQQVGW 308          
BLAST of mRNA_M-pyrifera_M_contig89059.20649.1 vs. uniprot
Match: A0A6I6AIZ1_9PLAN (Outer membrane lipoprotein-sorting protein n=1 Tax=Gimesia benthica TaxID=2608982 RepID=A0A6I6AIZ1_9PLAN)

HSP 1 Score: 186 bits (472), Expect = 1.410e-53
Identity = 103/272 (37.87%), Postives = 150/272 (55.15%), Query Frame = 1
Query:    1 QALINKLEQNEAFYSELKLNLHENYQQPPGNTRPTWKVENETEYSILVQGEKFRQDETTAGKFRL-VPSPPQKNQRHFVEGMNTTLTLFDGTTYRRFHEIDHESARAVGQRNQNKLGEISDLPKRMENYGRPHMLLES-SPHVPLSIFLSGKKAMVHFPGLPVHPKPFQVKAWIEGTGEIQGLKCTQVVVERLNDSGVRFSKQILWLAQERNLIPVKIVTYYDQFSREKPIKEAFVDEWQQLGAGVWFPRQAHIDRYNLILFKYNGSYEIDW 810
            Q LI  +EQ EA Y  LKL +   YQQP     P  +   ++E +++VQGEK+RQ++ T G+F+     PP K   HF  G   +  +++G T ++F   D +      +R     G+I+    RMEN  RPHMLL +  P +PLS +L G  A+   PGLP +         I G   +QGLKC +V ++R  +SG    + +LWLA+ERNL+PV+ +TY    S E P  E +VDEW ++  GVWFPR  H DR + I++      ++ W
Sbjct:   37 QTLIRDVEQQEALYRNLKLQMQLLYQQPLKPADPEKQTNLKSELTLIVQGEKYRQEKQTKGRFKQGYIVPPDKPYHHFNIGTEQSCQVYNGETLQKFFHYDRDRGLTTNERQTGGHGDITHEQLRMENLLRPHMLLSNHGPRIPLSTWLKGTSAVAASPGLPNYDNRTAYTTEILGEETVQGLKCIKVQIDRRRNSGKSEHRDVLWLARERNLLPVQAMTYQFSRSTEIPQSETWVDEWLEVRPGVWFPRTFHTDRLDWIMYVLKKKQQVGW 308          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89059.20649.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E7K917_9PLAN4.930e-19196.30Uncharacterized protein n=3 Tax=Gimesia TaxID=1649... [more]
A0A517WFT9_9PLAN9.810e-18694.07Uncharacterized protein n=2 Tax=Gimesia chilikensi... [more]
A0A6I6AI48_9PLAN1.660e-18291.11Outer membrane lipoprotein-sorting protein n=1 Tax... [more]
A0A813BF81_SYMMI1.720e-18092.59Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
A0A517QA59_9PLAN8.040e-13768.27Uncharacterized protein n=2 Tax=Gimesia panareensi... [more]
A0A355GII6_9PLAN3.200e-5940.81Uncharacterized protein n=2 Tax=Planctomycetaceae ... [more]
A0A2E7K925_9PLAN4.090e-5639.71Uncharacterized protein n=4 Tax=Gimesia TaxID=1649... [more]
A0A518A9B0_9PLAN1.810e-5539.34Uncharacterized protein n=3 Tax=Gimesia panareensi... [more]
UPI00118A22C89.030e-5538.60outer membrane lipoprotein-sorting protein n=1 Tax... [more]
A0A6I6AIZ1_9PLAN1.410e-5337.87Outer membrane lipoprotein-sorting protein n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89059contigM-pyrifera_M_contig89059:1..810 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size810
Cds size810
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816800.3187134-CDS-M-pyrifera_M_contig89059:0..8101622816800.3187134-CDS-M-pyrifera_M_contig89059:0..810Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89059 1..810 -
1692278186.2952452-CDS-M-pyrifera_M_contig89059:0..8101692278186.2952452-CDS-M-pyrifera_M_contig89059:0..810Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89059 1..810 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89059.20649.1prot_M-pyrifera_M_contig89059.20649.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig89059 1..810 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig89059.20649.1

>prot_M-pyrifera_M_contig89059.20649.1 ID=prot_M-pyrifera_M_contig89059.20649.1|Name=mRNA_M-pyrifera_M_contig89059.20649.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=270bp
QALINKLEQNEAFYSELKLNLHENYQQPPGNTRPTWKVENETEYSILVQG
EKFRQDETTAGKFRLVPSPPQKNQRHFVEGMNTTLTLFDGTTYRRFHEID
HESARAVGQRNQNKLGEISDLPKRMENYGRPHMLLESSPHVPLSIFLSGK
KAMVHFPGLPVHPKPFQVKAWIEGTGEIQGLKCTQVVVERLNDSGVRFSK
QILWLAQERNLIPVKIVTYYDQFSREKPIKEAFVDEWQQLGAGVWFPRQA
HIDRYNLILFKYNGSYEIDW
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mRNA from alignment at M-pyrifera_M_contig89059:1..810-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig89059.20649.1 ID=mRNA_M-pyrifera_M_contig89059.20649.1|Name=mRNA_M-pyrifera_M_contig89059.20649.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=810bp|location=Sequence derived from alignment at M-pyrifera_M_contig89059:1..810- (Macrocystis pyrifera P11B4 male)
CAGGCACTGATCAACAAGTTGGAACAAAATGAAGCGTTCTACTCTGAACT GAAACTCAACCTACACGAGAATTACCAGCAGCCGCCTGGTAACACCCGCC CCACGTGGAAGGTCGAAAATGAGACGGAATACTCGATCCTGGTCCAGGGA GAGAAATTCCGCCAGGATGAGACCACTGCGGGGAAATTTCGATTAGTGCC GTCGCCCCCCCAGAAAAATCAGAGGCACTTCGTCGAGGGGATGAATACGA CGCTGACGCTGTTTGACGGAACCACCTATCGTCGCTTCCATGAAATTGAT CATGAATCCGCGCGCGCGGTAGGTCAACGCAATCAGAACAAACTGGGAGA AATCTCAGATTTACCCAAGCGAATGGAAAACTACGGACGGCCGCACATGC TGCTCGAGAGCTCACCCCACGTCCCGCTTTCGATTTTCTTGAGCGGAAAG AAAGCCATGGTTCATTTTCCAGGATTACCAGTTCACCCCAAGCCATTCCA GGTCAAAGCCTGGATTGAAGGGACGGGGGAGATTCAGGGATTGAAGTGCA CCCAGGTCGTGGTCGAACGGTTGAATGACAGTGGTGTCCGGTTCTCGAAG CAGATCTTGTGGCTGGCCCAGGAGCGGAATCTGATACCGGTGAAGATCGT AACCTATTACGACCAGTTTTCACGAGAGAAACCGATCAAAGAGGCGTTCG TCGACGAATGGCAGCAACTGGGTGCCGGCGTCTGGTTCCCGCGTCAGGCT CACATCGATCGCTATAATCTGATTTTATTCAAATATAATGGTAGCTACGA GATCGACTGG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig89059:1..810-

>mRNA_M-pyrifera_M_contig89059.20649.1 ID=mRNA_M-pyrifera_M_contig89059.20649.1|Name=mRNA_M-pyrifera_M_contig89059.20649.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1620bp|location=Sequence derived from alignment at M-pyrifera_M_contig89059:1..810- (Macrocystis pyrifera P11B4 male)
CAGGCACTGATCAACAAGTTGGAACAAAATGAAGCGTTCTACTCTGAACT
GAAACTCAACCTACACGAGAATTACCAGCAGCCGCCTGGTAACACCCGCC
CCACGTGGAAGGTCGAAAATGAGACGGAATACTCGATCCTGGTCCAGGGA
GAGAAATTCCGCCAGGATGAGACCACTGCGGGGAAATTTCGATTAGTGCC
GTCGCCCCCCCAGAAAAATCAGAGGCACTTCGTCGAGGGGATGAATACGA
CGCTGACGCTGTTTGACGGAACCACCTATCGTCGCTTCCATGAAATTGAT
CATGAATCCGCGCGCGCGGTAGGTCAACGCAATCAGAACAAACTGGGAGA
AATCTCAGATTTACCCAAGCGAATGGAAAACTACGGACGGCCGCACATGC
TGCTCGAGAGCTCACCCCACGTCCCGCTTTCGATTTTCTTGAGCGGAAAG
AAAGCCATGGTTCATTTTCCAGGATTACCAGTTCACCCCAAGCCATTCCA
GGTCAAAGCCTGGATTGAAGGGACGGGGGAGATTCAGGGATTGAAGTGCA
CCCAGGTCGTGGTCGAACGGTTGAATGACAGTGGTGTCCGGTTCTCGAAG
CAGATCTTGTGGCTGGCCCAGGAGCGGAATCTGATACCGGTGAAGATCGT
AACCTATTACGACCAGTTTTCACGAGAGAAACCGATCAAAGAGGCGTTCG
TCGACGAATGGCAGCAACTGGGTGCCGGCGTCTGGTTCCCGCGTCAGGCT
CACATCGATCGCTATAATCTGATTTTATTCAAATATAATGGTAGCTACGA
GATCGACTGGCAGGCACTGATCAACAAGTTGGAACAAAATGAAGCGTTCT
ACTCTGAACTGAAACTCAACCTACACGAGAATTACCAGCAGCCGCCTGGT
AACACCCGCCCCACGTGGAAGGTCGAAAATGAGACGGAATACTCGATCCT
GGTCCAGGGAGAGAAATTCCGCCAGGATGAGACCACTGCGGGGAAATTTC
GATTAGTGCCGTCGCCCCCCCAGAAAAATCAGAGGCACTTCGTCGAGGGG
ATGAATACGACGCTGACGCTGTTTGACGGAACCACCTATCGTCGCTTCCA
TGAAATTGATCATGAATCCGCGCGCGCGGTAGGTCAACGCAATCAGAACA
AACTGGGAGAAATCTCAGATTTACCCAAGCGAATGGAAAACTACGGACGG
CCGCACATGCTGCTCGAGAGCTCACCCCACGTCCCGCTTTCGATTTTCTT
GAGCGGAAAGAAAGCCATGGTTCATTTTCCAGGATTACCAGTTCACCCCA
AGCCATTCCAGGTCAAAGCCTGGATTGAAGGGACGGGGGAGATTCAGGGA
TTGAAGTGCACCCAGGTCGTGGTCGAACGGTTGAATGACAGTGGTGTCCG
GTTCTCGAAGCAGATCTTGTGGCTGGCCCAGGAGCGGAATCTGATACCGG
TGAAGATCGTAACCTATTACGACCAGTTTTCACGAGAGAAACCGATCAAA
GAGGCGTTCGTCGACGAATGGCAGCAACTGGGTGCCGGCGTCTGGTTCCC
GCGTCAGGCTCACATCGATCGCTATAATCTGATTTTATTCAAATATAATG
GTAGCTACGAGATCGACTGG
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