mRNA_M-pyrifera_M_contig89057.20646.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig89057.20646.1 vs. uniprot
Match: UPI000F819D97 (DUF4124 domain-containing protein n=1 Tax=Sulfuriflexus mobilis TaxID=1811807 RepID=UPI000F819D97) HSP 1 Score: 73.6 bits (179), Expect = 8.300e-14 Identity = 52/143 (36.36%), Postives = 74/143 (51.75%), Query Frame = 1 Query: 4 LLSAVLCGAS-ASAEIYKWVDENGVTQFSERQPETEAPVATVEIDSSKATDTRETWQEREA---AFAERAETASKAAXXXXXXXXXXXXXXXNCAAARKRATSLQ-RPRINEVKEDGTRVRIGEDQRQAEIKKANEAIAEFCK 417 + + +LC AS A A +YKWVDENG+TQ+++ P + + V A D ++ E E F ER E +KA C ARK T LQ PRI + +DG ++ E++RQA I +ANEAI ++CK Sbjct: 13 IFAGLLCLASPAMATLYKWVDENGITQYTQTPPP-KGDFSQVTPPPKPAVDPQQVQSELEKRLEGFQERRENEAKAKAEADKKAAEQAEQAAKCEQARKNLTFLQTHPRIRAIDKDGKATQLAEEERQARITQANEAIKQYCK 154
BLAST of mRNA_M-pyrifera_M_contig89057.20646.1 vs. uniprot
Match: A0A1S8DH82_9GAMM (DUF4124 domain-containing protein n=5 Tax=Pseudomonadales TaxID=72274 RepID=A0A1S8DH82_9GAMM) HSP 1 Score: 65.1 bits (157), Expect = 1.300e-10 Identity = 49/144 (34.03%), Postives = 72/144 (50.00%), Query Frame = 1 Query: 1 ILLSAVL---CGASASAEIYKWVDENGVTQFSERQPETEAPVATVEIDSSKATDTRETWQEREAAFAERAETASKA--AXXXXXXXXXXXXXXXNCAAARKRATSLQR-PRINEVKEDGTRVRIGEDQRQAEIKKANEAIAEFC 414 I++SA L C ++ + ++Y+WVDENGVTQFS+ QP E +++ + T + ++ E+ E+ A A C A R T++Q PR+ EDGT RIGED+RQA I KA + E C Sbjct: 4 IVISAALSLVCTSAMATQMYRWVDENGVTQFSQ-QPPAEDQYQRMQVKPAPELGTGSLAPDTDSPAGEQTESTESAEPAAAAQPTPEQQAKLAEQCDALRANLTTMQNNPRLRRTLEDGTVERIGEDERQAMIAKAQADLQEHC 146
BLAST of mRNA_M-pyrifera_M_contig89057.20646.1 vs. uniprot
Match: A0A661BVV5_9GAMM (DUF4124 domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661BVV5_9GAMM) HSP 1 Score: 62.8 bits (151), Expect = 1.120e-9 Identity = 54/132 (40.91%), Postives = 66/132 (50.00%), Query Frame = 1 Query: 40 AEIYKWVDENGVTQFSERQP----ETEAPVATVEIDSSKATDTRETWQEREAAFAERA-ETASKAAXXXXXXXXXXXXXXXNCAAARKRATSLQ-RPRINEVKEDGTRVRIGEDQRQAEIKKANEAIAEFCK 417 A YKWVDE+G T ++++ P E+E ID S+A + E+ QE +R E K A NC AR R SL RPR+ V+ DGT VR E RQAEI KAN AIAE CK Sbjct: 26 AVTYKWVDEHGNTHYTQKAPAGGIESETINPPPAIDRSQAEEALESDQE----ILDRGRENREKQAEARQRAVDEKARQKKNCEIARARLRSLTYRPRVFFVQPDGTYVRADEVTRQAEIAKANAAIAEVCK 153
BLAST of mRNA_M-pyrifera_M_contig89057.20646.1 vs. uniprot
Match: A0A2E6HLT6_9GAMM (DUF4124 domain-containing protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2E6HLT6_9GAMM) HSP 1 Score: 62.0 bits (149), Expect = 2.390e-9 Identity = 42/141 (29.79%), Postives = 71/141 (50.35%), Query Frame = 1 Query: 1 ILLSAVLCGASASAEIYKWVDENGVTQFSERQPE--TEAPVATVEI-DSSKATDTRETWQEREAAFAERAETASKAAXXXXXXXXXXXXXXXNCAAARKRATSLQRPRINEVKEDGTRVRIGEDQRQAEIKKANEAIAEFC 414 ++LS++ S SAEIYKWVD+ G + E+ P T+ V T++I D+ E ++ + +R+E K C A+K+ + Q P++N + DGT +GE++RQA +KK+ E + + C Sbjct: 17 LVLSSI--ALSVSAEIYKWVDDEGNIHYGEKPPSVNTKEKVKTIKIRDNVDTQRAAEALNKKSKSLNDRSEERKKEKTDALNEKKELEENIMRCEQAKKQLANYQHPKVNVKESDGTYRALGEEERQAGLKKSEELVKKAC 155
BLAST of mRNA_M-pyrifera_M_contig89057.20646.1 vs. uniprot
Match: A0A2E6KS55_9GAMM (DUF4124 domain-containing protein n=2 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E6KS55_9GAMM) HSP 1 Score: 60.5 bits (145), Expect = 7.910e-9 Identity = 42/140 (30.00%), Postives = 66/140 (47.14%), Query Frame = 1 Query: 1 ILLSAVLCGASASAEIYKWVDENGVTQFSERQPETE-APVATVEI-DSSKATDTRETWQEREAAFAERAETASKAAXXXXXXXXXXXXXXXNCAAARKRATSLQRPRINEVKEDGTRVRIGEDQRQAEIKKANEAIAEFC 414 I L L S SAEIYKWVDE G + E+ P+TE + T++I D+ + +E+ E+ + K C A+K + Q PR+N ++DGT +GE++RQ+ I +A + + C Sbjct: 8 IFLVFALIAFSISAEIYKWVDEEGKVHYGEKPPQTENTDIKTIKIRDNVDTKSASDALKEKTNKLNEKNKNRKKEKADQKLAKEELKKNEALCEKAKKNLANYQHPRVNIEQKDGTMKTLGEEERQSGIIEAKDIVKRAC 147
BLAST of mRNA_M-pyrifera_M_contig89057.20646.1 vs. uniprot
Match: A0A1H6B5V3_9GAMM (DUF4124 domain-containing protein n=5 Tax=Pseudomonadales TaxID=72274 RepID=A0A1H6B5V3_9GAMM) HSP 1 Score: 60.1 bits (144), Expect = 1.010e-8 Identity = 44/144 (30.56%), Postives = 68/144 (47.22%), Query Frame = 1 Query: 7 LSAVLCGASASAEIYKWVDENGVTQFSERQPETE-------APVATVEIDSSKATDTRETWQEREAAFAERAETASKAAXXXXXXXXXXXXXXXNCAAARKRATSLQR-PRINEVKEDGTRVRIGEDQRQAEIKKANEAIAEFC 414 L A+ C + + ++YKWVDENGVTQFS++ P APV + + Q+ ++ E A+ A CA+ R R T+++ PR++ DGT RIGED+RQA I + + ++C Sbjct: 9 LLALGCSGAMATQLYKWVDENGVTQFSQQPPPDNQYQRMNVAPVPELGAPA----------QQNPPVTSDSPEPATNDASPAVDEAAAKAELEAYCASQRNRLTTMENNPRLSRTLPDGTVERIGEDERQAMIAETRSDLQKYC 142
BLAST of mRNA_M-pyrifera_M_contig89057.20646.1 vs. uniprot
Match: A0A7C1Q8A3_9GAMM (DUF4124 domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A7C1Q8A3_9GAMM) HSP 1 Score: 58.5 bits (140), Expect = 3.890e-8 Identity = 47/147 (31.97%), Postives = 66/147 (44.90%), Query Frame = 1 Query: 22 CGASASAEIYKWVDENGVTQFSERQPETE---------------APVATVEIDSSKATDTRETWQEREAAFAERAETASKAAXXXXXXXXXXXXXXXNCAAARKRATSLQR-PRINEVKEDGTRVRIGEDQRQAEIKKANEAIAEFC 414 C + ++YKWVDENGVTQFS++ P + P T E ++ D E A A++AE+ KA CA R+ T+L+ PR+ DG RIGED+RQ+ I A E +A +C Sbjct: 14 CTHVMAEKLYKWVDENGVTQFSQQPPASNQYERMNVTPPPALGSTPPPTAETSTATEPDPG-----NENAAAQKAESEQKA------------MRVAQCAKLREDLTTLENNPRLGRTNADGEMERIGEDERQSMITTAREELASYC 143
BLAST of mRNA_M-pyrifera_M_contig89057.20646.1 vs. uniprot
Match: A0A3N4AE75_9PSED (DUF4124 domain-containing protein n=2 Tax=Pseudomonadales TaxID=72274 RepID=A0A3N4AE75_9PSED) HSP 1 Score: 56.2 bits (134), Expect = 2.990e-7 Identity = 43/139 (30.94%), Postives = 67/139 (48.20%), Query Frame = 1 Query: 13 AVLCGASASAEIYKWVDENGVTQFSERQPETEA----PVATVEIDSSKATDTRETWQEREAAFAERAETASKAAXXXXXXXXXXXXXXXNCAAARKRATSLQR-PRINEVKEDGTRVRIGEDQRQAEIKKANEAIAEFC 414 ++ C +A++YKWVDENGVTQFS++ P ++ V+ S T + + +E TA++ A CA R+ +L+ PR+ DG RIGED+RQA + +A E +A +C Sbjct: 11 SLACTQVMAAKLYKWVDENGVTQFSQQPPASQQYERMNVSAPPQLGSTPTPAHTPPETQAGTSSESGSTAAQQAEREQKELREA-----QCAKLREDLKTLENNPRLGRTNADGQMERIGEDERQAMMTRAREELASYC 144
BLAST of mRNA_M-pyrifera_M_contig89057.20646.1 vs. uniprot
Match: A0A1G0JKR2_9GAMM (DUF4124 domain-containing protein n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_12_47_11 TaxID=1798301 RepID=A0A1G0JKR2_9GAMM) HSP 1 Score: 56.6 bits (135), Expect = 3.800e-7 Identity = 46/145 (31.72%), Postives = 73/145 (50.34%), Query Frame = 1 Query: 1 ILLSAVLCGA-SASAEIYKWVDENGVTQFSERQP------ETEAPVATVEIDSSKATDTRETWQEREAAFAERAETASKAAXXXXXXXXXXXXXXXNCAAARKRATSLQRPRINEVKEDGTRVRIGEDQRQAEIKKANEAIAEFC 414 ILLS ++ A A++YKWVD G T ++++ P ET+ P +V ++ +A D+ + Q+ E E E + + A C + R R SLQRPRI E+G R R+ E++R I++A + +AE C Sbjct: 40 ILLSGMITITFDARAQMYKWVDAEGNTHYTQQLPPDGVEYETKKPPPSV--NTEEAVDSFQKMQDEERKSRESKEKSGQEAAIKEQDQAELQK---KCDSLRLRINSLQRPRITTTDENGNRARMPEEERLKSIEEAEKKLAEHC 179
BLAST of mRNA_M-pyrifera_M_contig89057.20646.1 vs. uniprot
Match: UPI001EEB5081 (DUF4124 domain-containing protein n=1 Tax=Halopseudomonas sp. RR6 TaxID=2918528 RepID=UPI001EEB5081) HSP 1 Score: 55.1 bits (131), Expect = 8.060e-7 Identity = 47/149 (31.54%), Postives = 70/149 (46.98%), Query Frame = 1 Query: 1 ILLSAVL---CGASASAEIYKWVDENGVTQFSERQPETEAPVATVEIDSSKATDTRETWQEREAAFAERAETASKA-------AXXXXXXXXXXXXXXXNCAAARKRATSLQR-PRINEVKEDGTRVRIGEDQRQAEIKKANEAIAEFC 414 I+++AVL C ++ + ++Y+WVDENGVTQFS+ QP TE +++ + T + A +A + S A C A R T++Q PR+ +DGT RI ED+RQ I KA + E C Sbjct: 4 IIITAVLGLACSSAMATQLYRWVDENGVTQFSQ-QPPTEDQYQRMQVKPAPELGT--------GSLAPKASSDSAXXXXXXXXAPAAQPTAEQQAKLAEWCNALRANLTTMQNNPRLRRTLDDGTVERIAEDERQTMIAKAQADLQEHC 143 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89057.20646.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig89057.20646.1 >prot_M-pyrifera_M_contig89057.20646.1 ID=prot_M-pyrifera_M_contig89057.20646.1|Name=mRNA_M-pyrifera_M_contig89057.20646.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=140bp ILLSAVLCGASASAEIYKWVDENGVTQFSERQPETEAPVATVEIDSSKATback to top mRNA from alignment at M-pyrifera_M_contig89057:3..422+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig89057.20646.1 ID=mRNA_M-pyrifera_M_contig89057.20646.1|Name=mRNA_M-pyrifera_M_contig89057.20646.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=420bp|location=Sequence derived from alignment at M-pyrifera_M_contig89057:3..422+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig89057:3..422+ >mRNA_M-pyrifera_M_contig89057.20646.1 ID=mRNA_M-pyrifera_M_contig89057.20646.1|Name=mRNA_M-pyrifera_M_contig89057.20646.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=840bp|location=Sequence derived from alignment at M-pyrifera_M_contig89057:3..422+ (Macrocystis pyrifera P11B4 male)back to top |