mRNA_M-pyrifera_M_contig89055.20645.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig89055.20645.1
Unique NamemRNA_M-pyrifera_M_contig89055.20645.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig89055.20645.1 vs. uniprot
Match: A0A812IAX3_9DINO (MPK11 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812IAX3_9DINO)

HSP 1 Score: 124 bits (310), Expect = 5.010e-33
Identity = 56/67 (83.58%), Postives = 65/67 (97.01%), Query Frame = 1 
Query:    1 DLYIVSELMETDLHRIAHSKQDLTDDHVQYFVYQILRGLKYMHTANVLHRDLKPSNILVNSNCDLKV 201
            DLYI+++LMETDLHRI HS+QDL+DDHVQYFVYQILRGLK++HT+ VLHRDLKPSNILVNSNCDLK+
Sbjct:  169 DLYIMTDLMETDLHRIIHSRQDLSDDHVQYFVYQILRGLKFLHTSGVLHRDLKPSNILVNSNCDLKI 235
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BLAST of mRNA_M-pyrifera_M_contig89055.20645.1 vs. uniprot
Match: A0A5A8CCR4_CAFRO (Protein kinase domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CCR4_CAFRO)

HSP 1 Score: 124 bits (310), Expect = 2.580e-32
Identity = 56/67 (83.58%), Postives = 65/67 (97.01%), Query Frame = 1 
Query:    1 DLYIVSELMETDLHRIAHSKQDLTDDHVQYFVYQILRGLKYMHTANVLHRDLKPSNILVNSNCDLKV 201
            DLYI+++LMETDLHRI HS+QDL+DDHVQYFVYQILRGLK++HT+ VLHRDLKPSNILVNSNCDLK+
Sbjct:  124 DLYIMTDLMETDLHRIIHSRQDLSDDHVQYFVYQILRGLKFLHTSGVLHRDLKPSNILVNSNCDLKI 190
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BLAST of mRNA_M-pyrifera_M_contig89055.20645.1 vs. uniprot
Match: A0A7S0BYM0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BYM0_9STRA)

HSP 1 Score: 118 bits (296), Expect = 9.830e-32
Identity = 55/67 (82.09%), Postives = 63/67 (94.03%), Query Frame = 1 
Query:    1 DLYIVSELMETDLHRIAHSKQDLTDDHVQYFVYQILRGLKYMHTANVLHRDLKPSNILVNSNCDLKV 201
            D+YIV++LMETDLHRI +SKQ L+ DHVQYFVYQILR LKYMH+ANVLHRDLKPSN+LVNSNCDLK+
Sbjct:    5 DVYIVADLMETDLHRIIYSKQSLSIDHVQYFVYQILRALKYMHSANVLHRDLKPSNLLVNSNCDLKI 71
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BLAST of mRNA_M-pyrifera_M_contig89055.20645.1 vs. uniprot
Match: A0A7R9W1S5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W1S5_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.610e-31
Identity = 54/67 (80.60%), Postives = 63/67 (94.03%), Query Frame = 1 
Query:    1 DLYIVSELMETDLHRIAHSKQDLTDDHVQYFVYQILRGLKYMHTANVLHRDLKPSNILVNSNCDLKV 201
            D+YIVSELMETDLHRI +SKQ L+ DHV+YF+YQILR LKY+H+A+VLHRDLKPSN+LVNSNCDLKV
Sbjct:    7 DVYIVSELMETDLHRIIYSKQPLSIDHVRYFLYQILRALKYIHSADVLHRDLKPSNLLVNSNCDLKV 73
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BLAST of mRNA_M-pyrifera_M_contig89055.20645.1 vs. uniprot
Match: A0A418FXF1_9STRA (Mitogen-activated protein kinase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418FXF1_9STRA)

HSP 1 Score: 116 bits (290), Expect = 7.120e-31
Identity = 51/67 (76.12%), Postives = 64/67 (95.52%), Query Frame = 1 
Query:    1 DLYIVSELMETDLHRIAHSKQDLTDDHVQYFVYQILRGLKYMHTANVLHRDLKPSNILVNSNCDLKV 201
            D+YI+S+LMETDLHRI +S+Q L+DDH+QYF+YQILR LKY+H++NVLHRDLKPSN+L+NSNCDLKV
Sbjct:  121 DVYIISDLMETDLHRIIYSRQPLSDDHIQYFLYQILRALKYIHSSNVLHRDLKPSNLLLNSNCDLKV 187
[Close]
BLAST of mRNA_M-pyrifera_M_contig89055.20645.1 vs. uniprot
Match: A0A418AVS2_9STRA (Mitogen-activated protein kinase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AVS2_9STRA)

HSP 1 Score: 116 bits (290), Expect = 7.660e-31
Identity = 51/67 (76.12%), Postives = 64/67 (95.52%), Query Frame = 1 
Query:    1 DLYIVSELMETDLHRIAHSKQDLTDDHVQYFVYQILRGLKYMHTANVLHRDLKPSNILVNSNCDLKV 201
            D+YI+S+LMETDLHRI +S+Q L+DDH+QYF+YQILR LKY+H++NVLHRDLKPSN+L+NSNCDLKV
Sbjct:   67 DVYIISDLMETDLHRIIYSRQPLSDDHIQYFLYQILRALKYIHSSNVLHRDLKPSNLLLNSNCDLKV 133
[Close]
BLAST of mRNA_M-pyrifera_M_contig89055.20645.1 vs. uniprot
Match: A0A8J5J0U6_9STRA (Protein kinase domain-containing protein (Fragment) n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5J0U6_9STRA)

HSP 1 Score: 118 bits (295), Expect = 7.790e-31
Identity = 53/67 (79.10%), Postives = 64/67 (95.52%), Query Frame = 1 
Query:    1 DLYIVSELMETDLHRIAHSKQDLTDDHVQYFVYQILRGLKYMHTANVLHRDLKPSNILVNSNCDLKV 201
            D+YI+++LMETDLHRI +S+Q LTDDHVQYF+YQILR LKY+H+ANVLHRDLKPSN+L+NSNCDLKV
Sbjct:   61 DVYIIADLMETDLHRIIYSRQPLTDDHVQYFLYQILRALKYIHSANVLHRDLKPSNLLLNSNCDLKV 127
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BLAST of mRNA_M-pyrifera_M_contig89055.20645.1 vs. uniprot
Match: C5K557_PERM5 (Mitogen-activated protein kinase n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5K557_PERM5)

HSP 1 Score: 118 bits (295), Expect = 8.100e-31
Identity = 51/67 (76.12%), Postives = 63/67 (94.03%), Query Frame = 1 
Query:    1 DLYIVSELMETDLHRIAHSKQDLTDDHVQYFVYQILRGLKYMHTANVLHRDLKPSNILVNSNCDLKV 201
            D+YIV++LMETDLHR+ +SKQ LTD+H QYF+YQ+LRGLKY+H+ANV+HRDLKPSNILVN NCDLK+
Sbjct:   98 DIYIVTDLMETDLHRVIYSKQSLTDEHYQYFIYQMLRGLKYLHSANVIHRDLKPSNILVNKNCDLKI 164
[Close]
BLAST of mRNA_M-pyrifera_M_contig89055.20645.1 vs. uniprot
Match: Q7XY04_BETVV (Mitogen-activated protein kinase (Fragment) n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=Q7XY04_BETVV)

HSP 1 Score: 112 bits (279), Expect = 1.440e-30
Identity = 49/67 (73.13%), Postives = 62/67 (92.54%), Query Frame = 1 
Query:    1 DLYIVSELMETDLHRIAHSKQDLTDDHVQYFVYQILRGLKYMHTANVLHRDLKPSNILVNSNCDLKV 201
            D+YIV ELM+TDLH+I  S Q+LT+DH QYF+YQ+LRGLKY+H+ANVLHRDLKPSN+L+N+NCDLK+
Sbjct:   19 DVYIVYELMDTDLHQIIRSNQELTEDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKI 85
[Close]
BLAST of mRNA_M-pyrifera_M_contig89055.20645.1 vs. uniprot
Match: G0R041_ICHMG (Mitogen-activated protein kinase n=1 Tax=Ichthyophthirius multifiliis (strain G5) TaxID=857967 RepID=G0R041_ICHMG)

HSP 1 Score: 118 bits (296), Expect = 1.730e-30
Identity = 51/67 (76.12%), Postives = 64/67 (95.52%), Query Frame = 1 
Query:    1 DLYIVSELMETDLHRIAHSKQDLTDDHVQYFVYQILRGLKYMHTANVLHRDLKPSNILVNSNCDLKV 201
            D+YI++ELMETDLHR+ +S+QDLTD+H+QYF+YQILRG+ Y+H+ANV+HRDLKPSNILVN NCDLKV
Sbjct:  114 DIYIITELMETDLHRVIYSRQDLTDEHIQYFLYQILRGMLYIHSANVMHRDLKPSNILVNKNCDLKV 180
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89055.20645.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A812IAX3_9DINO5.010e-3383.58MPK11 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A5A8CCR4_CAFRO2.580e-3283.58Protein kinase domain-containing protein n=2 Tax=C... [more]
A0A7S0BYM0_9STRA9.830e-3282.09Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A7R9W1S5_9STRA1.610e-3180.60Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A418FXF1_9STRA7.120e-3176.12Mitogen-activated protein kinase n=1 Tax=Aphanomyc... [more]
A0A418AVS2_9STRA7.660e-3176.12Mitogen-activated protein kinase n=1 Tax=Aphanomyc... [more]
A0A8J5J0U6_9STRA7.790e-3179.10Protein kinase domain-containing protein (Fragment... [more]
C5K557_PERM58.100e-3176.12Mitogen-activated protein kinase n=1 Tax=Perkinsus... [more]
Q7XY04_BETVV1.440e-3073.13Mitogen-activated protein kinase (Fragment) n=1 Ta... [more]
G0R041_ICHMG1.730e-3076.12Mitogen-activated protein kinase n=1 Tax=Ichthyoph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89055contigM-pyrifera_M_contig89055:14..214 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score109.0
Seed ortholog evalue7.7e-22
Seed eggNOG ortholog4787.PITG_12186T0
KEGG koko:K04371
KEGG Pathwayko01521,ko01522,ko01524,ko04010,ko04011,ko04012,ko04013,ko04014,ko04015,ko04022,ko04024,ko04062,ko04066,ko04068,ko04071,ko04072,ko04114,ko04140,ko04150,ko04151,ko04210,ko04214,ko04218,ko04261,ko04270,ko04320,ko04350,ko04360,ko04370,ko04371,ko04380,ko04510,ko04520,ko04540,ko04550,ko04611,ko04620,ko04621,ko04650,ko04657,ko04658,ko04659,ko04660,ko04662,ko04664,ko04666,ko04668,ko04713,ko04720,ko04722,ko04723,ko04724,ko04725,ko04726,ko04730,ko04810,ko04910,ko04912,ko04914,ko04915,ko04916,ko04917,ko04919,ko04921,ko04926,ko04930,ko04933,ko04934,ko04960,ko05010,ko05020,ko05034,ko05131,ko05132,ko05133,ko05140,ko05142,ko05145,ko05152,ko05160,ko05161,ko05164,ko05165,ko05167,ko05200,ko05203,ko05205,ko05210,ko05211,ko05212,ko05213,ko05214,ko05215,ko05216,ko05218,ko05219,ko05220,ko05221,ko05223,ko05224,ko05225,ko05226,ko05230,ko05231,map01521,map01522,map01524,map04010,map04011,map04012,map04013,map04014,map04015,map04022,map04024,map04062,map04066,map04068,map04071,map04072,map04114,map04140,map04150,map04151,map04210,map04214,map04218,map04261,map04270,map04320,map04350,map04360,map04370,map04371,map04380,map04510,map04520,map04540,map04550,map04611,map04620,map04621,map04650,map04657,map04658,map04659,map04660,map04662,map04664,map04666,map04668,map04713,map04720,map04722,map04723,map04724,map04725,map04726,map04730,map04810,map04910,map04912,map04914,map04915,map04916,map04917,map04919,map04921,map04926,map04930,map04933,map04934,map04960,map05010,map05020,map05034,map05131,map05132,map05133,map05140,map05142,map05145,map05152,map05160,map05161,map05164,map05165,map05167,map05200,map05203,map05205,map05210,map05211,map05212,map05213,map05214,map05215,map05216,map05218,map05219,map05220,map05221,map05223,map05224,map05225,map05226,map05230,map05231
KEGG ModuleM00687
Hectar predicted targeting categoryno signal peptide or anchor
EggNOG free text desc.Serine/Threonine protein kinases, catalytic domain
EggNOG OGs3QEE1@4776,KOG0660@1,KOG0660@2759
EC2.7.11.24
COG Functional cat.T
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03036,ko04147
Exons1
Model size201
Cds size177
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816800.167474-UTR-M-pyrifera_M_contig89055:13..371622816800.167474-UTR-M-pyrifera_M_contig89055:13..37Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig89055 14..37 +
1692278186.2249262-UTR-M-pyrifera_M_contig89055:13..371692278186.2249262-UTR-M-pyrifera_M_contig89055:13..37Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig89055 14..37 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816800.1806145-CDS-M-pyrifera_M_contig89055:37..2141622816800.1806145-CDS-M-pyrifera_M_contig89055:37..214Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89055 38..214 +
1692278186.2425303-CDS-M-pyrifera_M_contig89055:37..2141692278186.2425303-CDS-M-pyrifera_M_contig89055:37..214Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89055 38..214 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89055.20645.1prot_M-pyrifera_M_contig89055.20645.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig89055 38..214 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig89055.20645.1

>prot_M-pyrifera_M_contig89055.20645.1 ID=prot_M-pyrifera_M_contig89055.20645.1|Name=mRNA_M-pyrifera_M_contig89055.20645.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=59bp
METDLHRIAHSKQDLTDDHVQYFVYQILRGLKYMHTANVLHRDLKPSNIL
VNSNCDLKV
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mRNA from alignment at M-pyrifera_M_contig89055:14..214+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig89055.20645.1 ID=mRNA_M-pyrifera_M_contig89055.20645.1|Name=mRNA_M-pyrifera_M_contig89055.20645.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=201bp|location=Sequence derived from alignment at M-pyrifera_M_contig89055:14..214+ (Macrocystis pyrifera P11B4 male)
GATTTGTACATTGTTTCCGAGCTGATGGAGACCGATTTGCACCGGATCGC
GCACTCCAAGCAGGACCTGACGGACGACCACGTGCAGTACTTTGTGTACC
AGATCCTGCGGGGGCTCAAGTACATGCACACGGCCAACGTCCTGCATAGG
GACCTCAAGCCCTCCAACATCCTGGTCAACTCAAACTGCGACCTCAAAGT
A
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig89055:14..214+

>mRNA_M-pyrifera_M_contig89055.20645.1 ID=mRNA_M-pyrifera_M_contig89055.20645.1|Name=mRNA_M-pyrifera_M_contig89055.20645.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=354bp|location=Sequence derived from alignment at M-pyrifera_M_contig89055:14..214+ (Macrocystis pyrifera P11B4 male)
ATGGAGACCGATTTGCACCGGATCGCGCACTCCAAGCAGGACCTGACGGA
CGACCACGTGCAGTACTTTGTGTACCAGATCCTGCGGGGGCTCAAGTACA
TGCACACGGCCAACGTCCTGCATAGGGACCTCAAGCCCTCCAACATCCTG
GTCAACTCAAACTGCGACCTCAAAGTAATGGAGACCGATTTGCACCGGAT
CGCGCACTCCAAGCAGGACCTGACGGACGACCACGTGCAGTACTTTGTGT
ACCAGATCCTGCGGGGGCTCAAGTACATGCACACGGCCAACGTCCTGCAT
AGGGACCTCAAGCCCTCCAACATCCTGGTCAACTCAAACTGCGACCTCAA
AGTA
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