mRNA_M-pyrifera_M_contig890.20638.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig890.20638.1
Unique NamemRNA_M-pyrifera_M_contig890.20638.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig890.20638.1 vs. uniprot
Match: D7FTJ6_ECTSI (Oxa1 or Cox18/Oxa2 homolog, mitochondrial integral inner membrane protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTJ6_ECTSI)

HSP 1 Score: 272 bits (695), Expect = 1.160e-84
Identity = 147/239 (61.51%), Postives = 183/239 (76.57%), Query Frame = 1 
Query:  109 AEGDSWTPPPDAWKPDEAPVD-PRD-SMSAFQPGEGFGESAMDIAGEAVA-AAPDSAA------ATLHSAADLGLYPSHIFMHIIEFVQATAGVPYWEAIVITSIAAKIAMLPVVTTFQGMTKRMNVAKPEIAALQAKMQDIKDRVDANPEVKEAAMQEMSAVSHEMMAVLRTHRISYPKMIACIFGQAPVFISIFLATQQMGGYFPGYATGGLDWMSNLGAPDPTYTLPILTCTTMMV 798
            A+ D W+ PPDAW PDE P + P+D S+  F  GEGF   +   A +AVA AAPD++A      AT  SAADLG+YP H+FMH+IE+VQATAGVPYWEAIV+ S+AA+IA+LP V TF GM+KR+N+ KPE+A  Q KMQDIK+R++ANPE+KEAAM EM  VS EM  +L+ HRI +PKM+  +F Q PVFIS+FLAT+ MG YFPGY TGGLDWM NL APDPT+TLPILT  +M++
Sbjct:  159 ADADGWSAPPDAWAPDEVPPEIPQDASVPGFDVGEGFSVDSAAAALDAVAGAAPDASAVGTAMTATGLSAADLGMYPHHLFMHVIEYVQATAGVPYWEAIVMVSVAARIAVLPAVATFLGMSKRLNMIKPEMAVHQGKMQDIKNRMEANPEIKEAAMAEMMLVSQEMGNLLKQHRIHFPKMMLSMFAQFPVFISLFLATRDMGTYFPGYMTGGLDWMMNLNAPDPTWTLPILTSGSMIL 397
[Close]
BLAST of mRNA_M-pyrifera_M_contig890.20638.1 vs. uniprot
Match: A0A482SHT9_9ARCH (YidC/Oxa1 family membrane protein insertase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SHT9_9ARCH)

HSP 1 Score: 105 bits (261), Expect = 1.170e-22
Identity = 58/150 (38.67%), Postives = 84/150 (56.00%), Query Frame = 1 
Query:  325 MHIIEFVQATAGVPYWEAIVITSIAAKIAMLPVVTTFQGMTKRMNVAKPEIAALQAKMQDIKDRVDANPEVKEAAMQEMSAVSHEMMAVLRTHRISYPKMIACIFGQAPVFISIFLATQQMGGYFPGYATGGLDWMSNLGAPDPTYTLPI 774
            M  I++V   AGVPYWEAIV T++  +  +LPVV      + R+ VA+PE+  +Q  M    +  D+  ++K            EM AVL  H+++  + +     Q P+FI+ F+A + MG YFPG+ TGG  W +NL APD  Y LPI
Sbjct:   96 MKFIDYVHTLAGVPYWEAIVFTTVGLRFLLLPVVLKTTQSSARLAVARPEMQKVQEAMAKDTNTADSRVQLK---------YQKEMSAVLSKHKVNPVRALLWPVCQFPIFIAFFMALRDMGTYFPGFLTGGDFWFTNLSAPDSFYYLPI 236
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BLAST of mRNA_M-pyrifera_M_contig890.20638.1 vs. uniprot
Match: A0A6H5J862_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J862_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 1.340e-15
Identity = 65/200 (32.50%), Postives = 98/200 (49.00%), Query Frame = 1 
Query:  208 GFGESAMDIAGEAVAAAPDSAAATLHSAAD---LGLY-PSHIFMHIIEFVQATAGVPYWEAIVITSIAAKIAMLPVVTTFQGMTKRMNVAKPEIAALQAKMQDIKDRVDANPEVKEAAMQEMSAVSHEMMAVLRTHRISYPKMIACIFGQAPVFISIFLATQQMGGYFPGYATGGLDWMSNLGAPDPTYTLPILTCTTMM 795
            G  ++AM  AG A     + A ATL  A +   + LY P  + M  +++V AT G+PYW  I+  ++  + A+LP+         R    KPE+ ALQA ++   D+  + P   +   QE  A+        + H+ S     A    Q P+FI  FL  ++M    P +ATGG+ W  +LGAPDP    P++T   MM
Sbjct:  201 GSADAAMAAAGTA-----EQAQATLDVAPETFKMALYTPPQLAMMAVDYVHATTGMPYWMTIIAITVGIRTAILPIGLLAARNGARTAAMKPEMDALQAAIKG--DQQSSQPRKADRYRQETKAL-------FQKHKASLVMNAALPIVQLPLFIGFFLGLRRMPDVVPEFATGGVLWFQDLGAPDPYMIFPVMTGVMMM 386
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BLAST of mRNA_M-pyrifera_M_contig890.20638.1 vs. uniprot
Match: UPI001AE90CDB (mitochondrial inner membrane protein OXA1L isoform X1 n=2 Tax=Gallus gallus TaxID=9031 RepID=UPI001AE90CDB)

HSP 1 Score: 85.9 bits (211), Expect = 1.850e-15
Identity = 56/170 (32.94%), Postives = 85/170 (50.00%), Query Frame = 1 
Query:  295 DLGL---YPSHIFMHIIEFVQATAGVPYWEAIVITSIAAKIAMLPVVTTFQGMTKRMNVAKPEIAALQAKMQDIKDRVDANPEVKEAAMQEMSAVSHEMMAVLRTHRISYPKMIACIFGQAPVFISIFLATQQMGGY-FPGYATGGLDWMSNLGAPDPTYTLPILTCTTM 792
            DLGL    P  +  ++++F+    G+P+W AI   ++  ++A+LP++   Q    R     P I  L  ++QD   R  A P+    A  E++A         R H ++  +       Q P+F+S F+A QQM     PG   GG  W+S+L  PDPTY LP+LT  TM
Sbjct:  127 DLGLGAMSPVGLVQNLLQFLHLDVGLPWWGAIAAGTVCVRVALLPLLLKAQREAARTAPHLPHIQRLAQRLQDA--RRGAEPQKAARAYAELAAYQ-------RRHNVNPLRGFLVPIVQTPIFVSFFMALQQMAAAPLPGLKGGGAAWISDLSCPDPTYALPLLTSATM 287
[Close]
BLAST of mRNA_M-pyrifera_M_contig890.20638.1 vs. uniprot
Match: D8LJZ1_ECTSI (Oxa1 or Cox18/Oxa2 homolog, mitochondrial integral inner membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJZ1_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 2.950e-15
Identity = 65/200 (32.50%), Postives = 96/200 (48.00%), Query Frame = 1 
Query:  208 GFGESAMDIAGEAVAAAPDSAAATLHSAAD---LGLY-PSHIFMHIIEFVQATAGVPYWEAIVITSIAAKIAMLPVVTTFQGMTKRMNVAKPEIAALQAKMQDIKDRVDANPEVKEAAMQEMSAVSHEMMAVLRTHRISYPKMIACIFGQAPVFISIFLATQQMGGYFPGYATGGLDWMSNLGAPDPTYTLPILTCTTMM 795
            G  ++AM  AG A     D A A L  A +   + LY P  + M  +++V AT G+PYW  IV  ++  + A+LP+         R    KPE+  LQA ++   D+  + P   +   QE  A+        + H+ S     A    Q P+FI  FL  ++M    P +ATGG+ W  +LGAPDP    P++T   MM
Sbjct:   26 GGADAAMAAAGTA-----DQAQAALEVAPETFKMALYTPPQVAMMAVDYVHATTGMPYWMTIVAITVGIRTAILPIGLLAARNGARTAAMKPEMDELQAAIKG--DQQSSQPRKADRYRQETKAL-------FQKHKASLVMNAALPIVQLPLFIGFFLGLRRMPDVVPEFATGGVLWFQDLGAPDPYMIFPVMTGVMMM 211
[Close]
BLAST of mRNA_M-pyrifera_M_contig890.20638.1 vs. uniprot
Match: A0A8C2Z1Z6_CYCLU (OXA1L mitochondrial inner membrane protein n=1 Tax=Cyclopterus lumpus TaxID=8103 RepID=A0A8C2Z1Z6_CYCLU)

HSP 1 Score: 84.0 bits (206), Expect = 5.450e-15
Identity = 63/197 (31.98%), Postives = 100/197 (50.76%), Query Frame = 1 
Query:  232 IAGEAVAAAPDS-----AAATLHSAADLGLY---PSHIFMHIIEFVQATAGVPYWEAIVITSIAAKIAMLPVVTTFQGMTKRMNVAKPEIAALQAKMQDIKDRVDANPEVKEAAMQEMSAVSHEMMAVLRTHRISYPKMIACIFGQAPVFISIFLATQQMGGYFP--GYATGGLDWMSNLGAPDPTYTLPILTCTTM 792
            +  +AV AAP +     AAAT  S  +LGL    P  +  H++EF+    G+P+W AIV+ ++ A++A+ PV+   Q    ++N   PE+  L A+M + K   +           + +    E+    + H ++  +       QAPVFIS F+A ++M  Y P     TGGL W ++L A DP Y LP++   TM
Sbjct:   27 VLSQAVDAAPTAVEVLQAAATEISLTELGLAAHTPVGLVQHLLEFMHVDLGLPWWGAIVVGTVLARMAVFPVIVKGQREAAKLNNVMPEMTKLTARMNEAKQSGNKF---------DFAKAYSELNLFQKKHDVNPLRGFLIPVVQAPVFISFFIALRKMS-YLPVPSMQTGGLLWFTDLTAADPFYILPVVVTGTM 213
[Close]
BLAST of mRNA_M-pyrifera_M_contig890.20638.1 vs. uniprot
Match: A0A8C2Z1V8_CYCLU (OXA1L mitochondrial inner membrane protein n=1 Tax=Cyclopterus lumpus TaxID=8103 RepID=A0A8C2Z1V8_CYCLU)

HSP 1 Score: 84.0 bits (206), Expect = 9.900e-15
Identity = 63/197 (31.98%), Postives = 100/197 (50.76%), Query Frame = 1 
Query:  232 IAGEAVAAAPDS-----AAATLHSAADLGLY---PSHIFMHIIEFVQATAGVPYWEAIVITSIAAKIAMLPVVTTFQGMTKRMNVAKPEIAALQAKMQDIKDRVDANPEVKEAAMQEMSAVSHEMMAVLRTHRISYPKMIACIFGQAPVFISIFLATQQMGGYFP--GYATGGLDWMSNLGAPDPTYTLPILTCTTM 792
            +  +AV AAP +     AAAT  S  +LGL    P  +  H++EF+    G+P+W AIV+ ++ A++A+ PV+   Q    ++N   PE+  L A+M + K   +           + +    E+    + H ++  +       QAPVFIS F+A ++M  Y P     TGGL W ++L A DP Y LP++   TM
Sbjct:  149 VLSQAVDAAPTAVEVLQAAATEISLTELGLAAHTPVGLVQHLLEFMHVDLGLPWWGAIVVGTVLARMAVFPVIVKGQREAAKLNNVMPEMTKLTARMNEAKQSGNKF---------DFAKAYSELNLFQKKHDVNPLRGFLIPVVQAPVFISFFIALRKMS-YLPVPSMQTGGLLWFTDLTAADPFYILPVVVTGTM 335
[Close]
BLAST of mRNA_M-pyrifera_M_contig890.20638.1 vs. uniprot
Match: A0A8C2SU16_COTJA (OXA1L mitochondrial inner membrane protein n=2 Tax=Coturnix japonica TaxID=93934 RepID=A0A8C2SU16_COTJA)

HSP 1 Score: 83.2 bits (204), Expect = 1.280e-14
Identity = 51/170 (30.00%), Postives = 83/170 (48.82%), Query Frame = 1 
Query:  295 DLGL---YPSHIFMHIIEFVQATAGVPYWEAIVITSIAAKIAMLPVVTTFQGMTKRMNVAKPEIAALQAKMQDIKDRVDANPEVKEAAMQEMSAVSHEMMAVLRTHRISYPKMIACIFGQAPVFISIFLATQQMGGY-FPGYATGGLDWMSNLGAPDPTYTLPILTCTTM 792
            DLGL    P  +  ++++F+    G+P+W AI   ++  ++A+LP++   Q    R     P I  L  ++QD K   D           + +  +     + + H ++  +       Q P+FIS FLA QQM     PG+  GG  W+++L  PDPTY LP+L+  TM
Sbjct:   98 DLGLGSLTPVGLIQNLLQFLHLDVGLPWWGAIAAGTLCVRVALLPLLLKAQREAARTAPHLPHIQRLAQRLQDAKRGADP----------QQAPYNRSCWRIKQKHNVNPLRGFLVPIVQTPIFISFFLALQQMAALPVPGFQHGGAGWINDLSCPDPTYALPLLSSATM 257
[Close]
BLAST of mRNA_M-pyrifera_M_contig890.20638.1 vs. uniprot
Match: A0A1R3L695_ASPOF (Uncharacterized protein n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A1R3L695_ASPOF)

HSP 1 Score: 82.4 bits (202), Expect = 1.910e-14
Identity = 51/162 (31.48%), Postives = 81/162 (50.00%), Query Frame = 1 
Query:  310 PSHIFMHIIEFVQATAGVPYWEAIVITSIAAKIAMLPVVTTFQGMTKRMNVAKPEIAALQAKMQDIKDRVDANPEVKEAAMQEMSAVSHEMMAVLRTHRISYPKMIACIFGQAPVFISIFLATQQMGGYFPGYATGGLDWMSNLGAPDPTYTLPILTCTTMM 795
            P     H+I+ V +  GV +W +IV+T+I  + A +P+V      T +++  +PE+  L+ +MQ+  D             Q M     +M A+ + H ++    +  +  Q P+FIS FLA Q M    P +  GG  W ++L  PDP Y LPILT  T +
Sbjct:  119 PVAALQHLIDLVHSFTGVNWWASIVLTTILIRTATMPLVLNQIRSTTKLSAMRPEMEELKDQMQNSMDP------------QTMMENQKKMKAIFKKHGVTPFTPLKGLLIQGPIFISFFLAIQNMVEKVPSFKGGGALWFTDLTIPDPLYALPILTGLTFL 268
[Close]
BLAST of mRNA_M-pyrifera_M_contig890.20638.1 vs. uniprot
Match: A0A4Y2NDD4_ARAVE (Mitochondrial inner membrane protein OXA1L n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2NDD4_ARAVE)

HSP 1 Score: 82.0 bits (201), Expect = 2.740e-14
Identity = 52/164 (31.71%), Postives = 82/164 (50.00%), Query Frame = 1 
Query:  310 PSHIFMHIIEFVQATAGVPYWEAIVITSIAAKIAMLPVVTTFQGMTKRMNVAKPEIAALQAKMQDIKDRVDANPEVKEAAMQEMSAVSHEMMAVLRTHRISYPKMIACIFGQAPVFISIFLATQQMG-GYFPGYATGGLDWMSNLGAPDPTYTLPILTCTTMMV 798
            P  +   ++E++  +  +P+W AIV ++I A+I +LP++   Q  T  M+   P++  LQAK  + +         K     E S  + E+   ++ H  +  K       QAPVFIS FL  + M          GGL W ++L  PDP Y LPI++CTT+ V
Sbjct:   68 PVGLIQMLLEYLHISCEMPWWGAIVASTIVARILLLPILIKTQRNTINMSNYMPQLQYLQAKFGEAR---------KSGNAMEASRYALEITQYMKKHNFNPVKSALLPLAQAPVFISFFLGLRAMAKAPVESMQWGGLSWTTDLTVPDPYYILPIMSCTTLYV 222
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig890.20638.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTJ6_ECTSI1.160e-8461.51Oxa1 or Cox18/Oxa2 homolog, mitochondrial integral... [more]
A0A482SHT9_9ARCH1.170e-2238.67YidC/Oxa1 family membrane protein insertase n=1 Ta... [more]
A0A6H5J862_9PHAE1.340e-1532.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001AE90CDB1.850e-1532.94mitochondrial inner membrane protein OXA1L isoform... [more]
D8LJZ1_ECTSI2.950e-1532.50Oxa1 or Cox18/Oxa2 homolog, mitochondrial integral... [more]
A0A8C2Z1Z6_CYCLU5.450e-1531.98OXA1L mitochondrial inner membrane protein n=1 Tax... [more]
A0A8C2Z1V8_CYCLU9.900e-1531.98OXA1L mitochondrial inner membrane protein n=1 Tax... [more]
A0A8C2SU16_COTJA1.280e-1430.00OXA1L mitochondrial inner membrane protein n=2 Tax... [more]
A0A1R3L695_ASPOF1.910e-1431.48Uncharacterized protein n=1 Tax=Asparagus officina... [more]
A0A4Y2NDD4_ARAVE2.740e-1431.71Mitochondrial inner membrane protein OXA1L n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig890contigM-pyrifera_M_contig890:25844..31225 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score275.8
Seed ortholog evalue2.1e-71
Seed eggNOG ortholog2880.D7FTJ6
KEGG koko:K03217
KEGG TC2.A.9
KEGG Pathwayko02024,ko03060,ko03070,map02024,map03060,map03070
KEGG ModuleM00335
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0016020,GO:0019866,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464
EggNOG free text desc.membrane insertase activity
EggNOG OGsCOG0706@1,KOG1239@2759
Ec32 ortholog descriptionOxa1 or Cox18/Oxa2 homolog, mitochondrial integral inner membrane protein
Ec32 orthologEc-21_001610.1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko02044,ko03029
Exons6
Model size798
Cds size798
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig890.20638.1prot_M-pyrifera_M_contig890.20638.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig890 25844..31225 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816799.7226505-CDS-M-pyrifera_M_contig890:25843..259581622816799.7226505-CDS-M-pyrifera_M_contig890:25843..25958Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig890 25844..25958 +
1692278185.9265935-CDS-M-pyrifera_M_contig890:25843..259581692278185.9265935-CDS-M-pyrifera_M_contig890:25843..25958Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig890 25844..25958 +
1622816799.7345154-CDS-M-pyrifera_M_contig890:26649..268721622816799.7345154-CDS-M-pyrifera_M_contig890:26649..26872Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig890 26650..26872 +
1692278185.941867-CDS-M-pyrifera_M_contig890:26649..268721692278185.941867-CDS-M-pyrifera_M_contig890:26649..26872Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig890 26650..26872 +
1622816799.746501-CDS-M-pyrifera_M_contig890:27827..279241622816799.746501-CDS-M-pyrifera_M_contig890:27827..27924Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig890 27828..27924 +
1692278185.9529927-CDS-M-pyrifera_M_contig890:27827..279241692278185.9529927-CDS-M-pyrifera_M_contig890:27827..27924Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig890 27828..27924 +
1622816799.7606866-CDS-M-pyrifera_M_contig890:28877..289581622816799.7606866-CDS-M-pyrifera_M_contig890:28877..28958Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig890 28878..28958 +
1692278185.9638934-CDS-M-pyrifera_M_contig890:28877..289581692278185.9638934-CDS-M-pyrifera_M_contig890:28877..28958Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig890 28878..28958 +
1622816799.7756803-CDS-M-pyrifera_M_contig890:30388..305561622816799.7756803-CDS-M-pyrifera_M_contig890:30388..30556Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig890 30389..30556 +
1692278185.9741666-CDS-M-pyrifera_M_contig890:30388..305561692278185.9741666-CDS-M-pyrifera_M_contig890:30388..30556Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig890 30389..30556 +
1622816799.787575-CDS-M-pyrifera_M_contig890:31111..312251622816799.787575-CDS-M-pyrifera_M_contig890:31111..31225Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig890 31112..31225 +
1692278185.9848695-CDS-M-pyrifera_M_contig890:31111..312251692278185.9848695-CDS-M-pyrifera_M_contig890:31111..31225Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig890 31112..31225 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig890.20638.1

>prot_M-pyrifera_M_contig890.20638.1 ID=prot_M-pyrifera_M_contig890.20638.1|Name=mRNA_M-pyrifera_M_contig890.20638.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=266bp
MRSPTDRWSSSDSAGGKGKASGEAGDDGDGGFSETGAEGDSWTPPPDAWK
PDEAPVDPRDSMSAFQPGEGFGESAMDIAGEAVAAAPDSAAATLHSAADL
GLYPSHIFMHIIEFVQATAGVPYWEAIVITSIAAKIAMLPVVTTFQGMTK
RMNVAKPEIAALQAKMQDIKDRVDANPEVKEAAMQEMSAVSHEMMAVLRT
HRISYPKMIACIFGQAPVFISIFLATQQMGGYFPGYATGGLDWMSNLGAP
DPTYTLPILTCTTMMV
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mRNA from alignment at M-pyrifera_M_contig890:25844..31225+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig890.20638.1 ID=mRNA_M-pyrifera_M_contig890.20638.1|Name=mRNA_M-pyrifera_M_contig890.20638.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5382bp|location=Sequence derived from alignment at M-pyrifera_M_contig890:25844..31225+ (Macrocystis pyrifera P11B4 male)
ATGCGCTCACCAACGGATAGGTGGAGTAGCAGTGACTCTGCCGGGGGCAA
GGGGAAAGCCAGCGGCGAAGCCGGTGATGACGGCGACGGCGGCTTCTCAG
AGACAGGGGCCGAAGGTACAAGCACCACATCAGCGGCGTGCGTCCTGTGG
TTTTTCTCGACGTGTGCTCGCGTCACCGGCGCGCTATTTGAGGGACGTTC
TTGTCGGAGAACTTTTTTTTCCAGAAATTCCATAATTCCCATGGGTTTTT
TTTCGCGATTTTTTTTTTCCAGATTTTCCTGATTTTTTCTCCTACTATAT
GAAGTTTAGCTTGCCTGATATTTTGACCAGTGTTAAATTTCACTAATCGT
GACAGAACGCTTCCGTATCTTGATAAAAAAAACTAAAAAAATCCTAAAGT
TGGTAATTCTGGGGAAAAAAACTCTCCCATATTACGACCCTAACCCTGCG
TTTACGAGTGTACGTACTGCGTTTGTTGTCAAGTTGTCCAGGGGCTACTG
TAGAGCCGTTTGTGTTGGGTCCCTAAATGCTGTATATACGCTCTTGTCTA
TACTCGAAAGTACACAACGAAGGACGCCACGATTCCGCCTGTCTCTTCAT
ACGCCTTAATCATATACGCATTACCATTATGTATGAATGTTGTGTTTTAG
GTACCACTCTGCCCGCAAATGTAACGACCGTTCTGGGTATTCATAGTACC
CAAAACGATCATTATATTACCGGACAGCGTGATTTAATCTAACGACATGT
TTTCATTCTTGGTTACCTCCCGCTTCCGCCACCACCACTACCTCCGCCGC
CGCCAGGGGACAGCTGGACGCCCCCCCCCGACGCGTGGAAGCCTGACGAG
GCTCCAGTAGACCCACGAGATTCCATGTCGGCTTTCCAACCTGGGGAAGG
GTTTGGGGAGTCTGCTATGGATATTGCCGGGGAGGCTGTGGCGGCGGCGC
CGGATTCGGCGGCTGCAACGTTGCATTCGGCGGCCGACCTTGGCCTCTAC
CCCAGCCACATCTTCATGCACATTATTGAGTGAGTGTTATTCGGTGTGTA
GTTTCGTGAGATGTGTCCGTGTTTTTGAGTGTTTTGCGTGTGTTGATTTA
GTGTGTCGAATGCGTTGAGAGTCTTGACAGTGTCTTGAGAGTGTCTTGAG
TATCTTGGGTGTCTTGATTGTCTTGAGCGGCTTGAGTGTCTTGAGCGTCA
GTGTGTCAGTTTGTCAGTGTGCACAGCCCGGCGGCCAGACTGCAGAGGGG
CACTATTTTGGAGAGCGTGTTGGGCGGACTGTTGTGCGTGGCGTGGCCCG
TGGCGTGGTGCGTTCGACTCGGCAAGTTATGTGAAGGGCGGGTGGTTTCT
CTCGCTGCAAAGGACAGAAAGCCCATAGCGGTCGTTTCATTTGGTAATTT
TGGGGTGATGGGGGTGAGGTGGGGGCGTTCTCGGACATAGAGGGCACGCG
GGTGATGGTGGCAAGACTGAGGAACAACGGCAGGTGCGTGGGTTCCTTGA
AGAGACACCCGTGAAATATTGACAGCAGTCCTTATACCACGGGTTGTTCG
ATTGGTGCTGTTGTAGGAGGTCTGATGCGGACCATGTAGGCGCTGGGATA
CCCCGACAGTAGTCATCTGTGCATACAGGGCACCAGCGACCGACGGCCGA
CACCGTTGATGCTGCCGTGTCCTGCCTCGCTCCATACTTAGCCCCTTCGG
TTGACCCGCCCGCAGAAGGATTGCTTGATTAACTTGGGCGGTCCCCGTTA
ATGGCACAGAGCGGCCGAGGCTTAACTTCCACCCTCGCCTTAGCACCGCC
TACCTCGCGACGACGGGGTTTTGCTGTGAATCCCCTTGTCGTGGTTGTTA
CGGGCACCCCAACACATTGCAAGGACCCTCCCTCCCTCCGCCTACTCTAC
CTACTAACTCCCCCTCCCTCCGTGCCGTGGCCTACACCACCCCACCCCGC
TCTGCTCTGCTCTCGCTCTCTCCCCTGGCGGCAGGTTTGTTCAGGCGACC
GCCGGCGTCCCTTACTGGGAAGCGATCGTGATCACCTCGATTGCGGCGAA
GATCGCGATGCTCCCGGTCGTCACGACCTTTGTGAGCATGGATCACGGCG
TGTAGGAAGGGGGGGGGGTGTACTCGTGTCATGCATGGCCGTAGTCGTAC
GGTCATCGACCCTCGCTTCTTTACAATATCGGAACGAAGCGCAATCAGGT
TTCACCGACTAGGGAGACATTGCTTGCACCAAGCGTATGTGGGGGGGGGG
GACTTGGGATCAACAGTGCCTCCTTGAACCGGTATAGCCTGACGTTGAAT
ATGCTCAGCGTATCTGTCGGTGCCGTGCCGATTGGTGCCGGGTAGGGGGG
AAAAAGTAGAATCAGTTCTAGCCACGACAGCGATAGTTGTTTCTGTTAGT
GCCGCAGCAGTAGATGTAGTGCTTGCAGCAGCAGCAGCAGCAGCAGCAGC
GGCAGCAGCAGCGGCAGTAGTAATGATGGTGGTAGCAGTAGTAGTAGGAG
TGCTCAAAGCACGATCTGTGCGGGGCTTTTGACGCAAGAGAGTTAGCATT
CGTGCGTCTCGAGGGTCGGTTACCACGCCTCACGCGCAGAGAGATTAGTG
TTGAATATAAATATAGTATCGAAAGTTTTTTGTCATGTCGAAATGTCGAA
CATTCGATATAGCGTATCGAACGCGCTTTGCCCTCTCTATTCCCTGATAT
CCCAGTATTTTTAATGCTGACACTGAACGAAAGGTTCGATGAATCAAATG
TGTCGTATCGATTCTGTTTCTCGTTTTCATCGGTATCGTATGTGTATCAA
ACTCAATTCGATAACCGATATCCAACACCACAGCAGTAATAAGAGATGAT
GTCGATGAAGCGCAACTGGGTGTTTACAGACCCCCGTGGATTGACGACCT
CGATAAGATTTCGTTGCTTGACCTCCCCCACCCCCGCCCTCCTTGCGCCT
TATCCTGGACTCCGTTTTGTGGCCTATCCGCTGTGCATGTGGGCCTCTGC
TACCCCGTGTTTTTTCGGGCGCCGGACGTTGCAGCAAGGGATGACGAAAC
GCATGAACGTGGCCAAGCCAGAGATCGCTGCTCTGCAAGCGAAGATGCAG
GACATCAAGGACAGGGTGAGATGGGACGAACCACTGCTCGTTGTGGCAAC
GAAGTGCGCCGTAAAAAGAGATATTTCAGTCAGTTGCCTCGCTTGATACC
TTACGTACGTACCCGTACACGGCCAAAGGCCACCAAGGGCGCCAACGTAC
CTCTCAACGCTATTATTACGGGGAACCATAGTTAATACCAGGTAGGACCT
ATGGTATACATAAAAACCTATATATTTACCTGTGTTTACTAACAATATTT
GGTCCTATCTACTATGGTCCTCCGTAGTAGGGTCGTTTTTAACGACACGT
ATTTTGGCAAAAATTGGCAAGTTGTTGGAAATTTGGATTTGCCAATTTAG
CCAGTTTTTTGCCAAGCTTTTCTACGGTTATTCCCCAAGCCCTTCGTTGG
CAAGTTTATGGAAATTTAGACTAGCCATTTCATTTGGCAAGCTTTTAGCA
AGTCTTTGAGAATCCAAATTTCCAAAAACTTGCTATTTTTGGCAAGTTTT
CACAGTGTCGTTCCAAACGGCTCTTATTAATAGTACTGTTGGTAAGTACT
ACAGTCCCGTTTTGAGGACAAACCACTCAAGTCCCCAAAACGGGACTGCA
GTACCAAATTGTTGACCCTTTTTACCAAAGATGTCAGGAGACATGTCAAG
CCGCGCAAAACGTGCGCTGTCAAGGATGCAGGGCCGAGTGTTCCGCACCA
AAACCTATCAGTTTTGTCTCGGTCAAGGCATGTCAAGGCAAAGTTGCTGT
CTGTCAATGTTGAAAGTGCTGTCTCCTGATATCTTTGATATTTACCGCTG
CACAATGTATATTGTACTGAATCCAAGTGGTGTGCCCCTAAACCGTGGGG
GCAGCCCTTAAGGAGTCAACTACGTGGATTTAGAGTTGACTATTTTTTTT
AGTATGTAGTGAAAGGTTAACAGCGTTTTTTTTTTAAAGCGCGCCCAGGT
AAAGTGCTCGGCTGTCCACGGCCCCAGCCGAAAAGATAGGCAGGTCGTTT
CGAATGACACGGTCTTGTCCCGACGAGGCAACTCGGCGTTCGTCGGTTAT
GCCCAGGGCGTTCGCCTACCCACTTCGCCTTTTCGTCGGTTGTGAAACGA
CGGTCTTTGCTCCGTAGGTACCAAGCACTCTAGACGAGAATATACGGACC
TGTAGCGTATAGCTTCCAATACATACAAGCCTTACGTTTGCGGGCCGAGG
GGTGGGGTGTTCTGCTGTATCGGGTGGCGTGTTTTTGCGTACCCTCGTTG
TCTTCTGCAGTTGCCTCTACCCACCCAATATCTTACAGCAGTAGTACCGC
TTACCTGATATGTACGTGCAGGGCATACCCTGGTTGATGTGTTTTAAAGT
CTCCGGTAGCCCCAAGATGTACTAAATCATGTCTCGGGCGCTCCTTTTGG
TTGTGTCGCGCGCCCGGTGCTGCTCACCCCGCGCCACCTCTACAGGTCGA
TGCCAACCCGGAGGTGAAGGAGGCGGCCATGCAAGAGATGTCGGCCGTGT
CTCACGAGATGATGGCTGTGCTCCGAACACACAGGATATCTTATCCCAAG
ATGATCGCATGCATCTTCGGACAGGCTCCTGTGTTCATCTCGATCTTCCT
CGCCACTCAGCAGGTGACTGTCAATAGCAATAGCGCACCAGCAGTAATCG
TTTCAACCTGTTTTCATGAGGTAGGGCAGCGCTCCGTTAGCAACTGGTAC
TGGTGGCTATTTGAAATTGTCGTCAACTGGAGTGACTGGGGGCTATTTGG
AACTGTCGTCAACGTGAGTGCGCGGGTGAAAGCCTACCGTAGTACGTACC
TGGTACCTGGTACTGGACTTTTTTGTTTTTATTTTTTCGAAGATTTTGGG
TCGGGTGGCGCGGACCTGCGGCTTCAGACCTCCGGATGAACAGCGGTAGA
CTTTGTAGACGGAAGGCAGCTGCGGCCGTCGACAGACCGGTCGATTGGGA
CTATGTAAAAGGGTGCTACTACCTGGGTTGGCCTGCTTTTTTCGCGGCAA
GCTGTATGGGTCGGTCTGGTATGTCGTGGCTTCCGTTTCCTCATACATAA
AAGTATCAGCTTCGGCCTCCCGGCTTCCCACCACGTTATTCCTGCCGCCT
CCCTCTACCTCTTCACTCCTTTGGTGTCTTGTCGCGGGGTACTGCGTCGC
GCTCGTTTCTTGGGACAGATGGGGGGCTACTTCCCCGGCTACGCGACGGG
TGGGTTGGATTGGATGTCGAATCTCGGAGCTCCTGACCCTACGTACACGT
TGCCAATCCTGACATGCACGACAATGATGGTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig890:25844..31225+

>mRNA_M-pyrifera_M_contig890.20638.1 ID=mRNA_M-pyrifera_M_contig890.20638.1|Name=mRNA_M-pyrifera_M_contig890.20638.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1596bp|location=Sequence derived from alignment at M-pyrifera_M_contig890:25844..31225+ (Macrocystis pyrifera P11B4 male)
ATGCGCTCACCAACGGATAGGTGGAGTAGCAGTGACTCTGCCGGGGGCAA
GGGGAAAGCCAGCGGCGAAGCCGGTGATGACGGCGACGGCGGCTTCTCAG
AGACAGGGGCCGAAGATGCGCTCACCAACGGATAGGTGGAGTAGCAGTGA
CTCTGCCGGGGGCAAGGGGAAAGCCAGCGGCGAAGCCGGTGATGACGGCG
ACGGCGGCTTCTCAGAGACAGGGGCCGAAGGGGACAGCTGGACGCCCCCC
CCCGACGCGTGGAAGCCTGACGAGGCTCCAGTAGACCCACGAGATTCCAT
GTCGGCTTTCCAACCTGGGGAAGGGTTTGGGGAGTCTGCTATGGATATTG
CCGGGGAGGCTGTGGCGGCGGCGCCGGATTCGGCGGCTGCAACGTTGCAT
TCGGCGGCCGACCTTGGCCTCTACCCCAGCCACATCTTCATGCACATTAT
TGAGGGACAGCTGGACGCCCCCCCCCGACGCGTGGAAGCCTGACGAGGCT
CCAGTAGACCCACGAGATTCCATGTCGGCTTTCCAACCTGGGGAAGGGTT
TGGGGAGTCTGCTATGGATATTGCCGGGGAGGCTGTGGCGGCGGCGCCGG
ATTCGGCGGCTGCAACGTTGCATTCGGCGGCCGACCTTGGCCTCTACCCC
AGCCACATCTTCATGCACATTATTGAGTTTGTTCAGGCGACCGCCGGCGT
CCCTTACTGGGAAGCGATCGTGATCACCTCGATTGCGGCGAAGATCGCGA
TGCTCCCGGTCGTCACGACCTTTGTTTGTTCAGGCGACCGCCGGCGTCCC
TTACTGGGAAGCGATCGTGATCACCTCGATTGCGGCGAAGATCGCGATGC
TCCCGGTCGTCACGACCTTTCAAGGGATGACGAAACGCATGAACGTGGCC
AAGCCAGAGATCGCTGCTCTGCAAGCGAAGATGCAGGACATCAAGGACAG
GCAAGGGATGACGAAACGCATGAACGTGGCCAAGCCAGAGATCGCTGCTC
TGCAAGCGAAGATGCAGGACATCAAGGACAGGGTCGATGCCAACCCGGAG
GTGAAGGAGGCGGCCATGCAAGAGATGTCGGCCGTGTCTCACGAGATGAT
GGCTGTGCTCCGAACACACAGGATATCTTATCCCAAGATGATCGCATGCA
TCTTCGGACAGGCTCCTGTGTTCATCTCGATCTTCCTCGCCACTCAGCAG
GTCGATGCCAACCCGGAGGTGAAGGAGGCGGCCATGCAAGAGATGTCGGC
CGTGTCTCACGAGATGATGGCTGTGCTCCGAACACACAGGATATCTTATC
CCAAGATGATCGCATGCATCTTCGGACAGGCTCCTGTGTTCATCTCGATC
TTCCTCGCCACTCAGCAGATGGGGGGCTACTTCCCCGGCTACGCGACGGG
TGGGTTGGATTGGATGTCGAATCTCGGAGCTCCTGACCCTACGTACACGT
TGCCAATCCTGACATGCACGACAATGATGGTGATGGGGGGCTACTTCCCC
GGCTACGCGACGGGTGGGTTGGATTGGATGTCGAATCTCGGAGCTCCTGA
CCCTACGTACACGTTGCCAATCCTGACATGCACGACAATGATGGTG
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