mRNA_M-pyrifera_M_contig88993.20637.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig88993.20637.1
Unique NamemRNA_M-pyrifera_M_contig88993.20637.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig88993.20637.1 vs. uniprot
Match: A0A7X6AQM8_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6AQM8_9ACTN)

HSP 1 Score: 456 bits (1173), Expect = 1.310e-154
Identity = 222/270 (82.22%), Postives = 238/270 (88.15%), Query Frame = 1
Query:    1 AGQLIDLSANEALAQITDWSLSNWSRSADAGQPSPEMRAGPGPVYTIIPCADGYVRLVVLSTRQWHAIRAWLDEPEYLQDPELDSFIGRMMIADAVLNPLYCELWAEMTMLEVCEEAQERGIVCTPILKPSEVLDNPHLESRNTFDEVALEDGRTMKLPSGWFEFDGERVGPTGRPPAVGQHTDEVFANLGDARPAPSAPLETAKPLAGVRVMDFGHGGVGVETGRMFGEYGADVVKIESRTYPDFIRVVLGGEMSPSFASSSRSKRSFG 810
            AGQ+ID S NE +AQITDWSLSNWSR+AD GQP+ EMRAGPGPVYTIIPCADGYVRLVVLS RQWHAIRAW+ EP+YLQDPELD F+GR+MI+D+VLNPLY EL+A MTM EV  EAQ RGIVCTP LKP +VL NPH ESR TFD V L+DGRTMKLPSGWFE DGERVGPTG PP VGQHTDEVFA LGD RPAP+ PLE  KPLAG+RVMDFGHGGVGVETGRMFGEYGADVVKIESRTY DFIR V+G EMSPSFASSSRSKRSFG
Sbjct:  177 AGQIIDASVNEGVAQITDWSLSNWSRAADEGQPTSEMRAGPGPVYTIIPCADGYVRLVVLSPRQWHAIRAWMGEPDYLQDPELDGFVGRLMISDSVLNPLYAELFAPMTMAEVSTEAQRRGIVCTPFLKPDDVLANPHFESRGTFDLVELDDGRTMKLPSGWFEIDGERVGPTGPPPHVGQHTDEVFAGLGDLRPAPTTPLERGKPLAGLRVMDFGHGGVGVETGRMFGEYGADVVKIESRTYIDFIRAVIGIEMSPSFASSSRSKRSFG 446          
BLAST of mRNA_M-pyrifera_M_contig88993.20637.1 vs. uniprot
Match: A0A7K1ZDL7_9ACTN (CoA transferase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZDL7_9ACTN)

HSP 1 Score: 419 bits (1078), Expect = 5.950e-139
Identity = 213/288 (73.96%), Postives = 234/288 (81.25%), Query Frame = 1
Query:    1 AGQLIDLSANEALAQITDWSLSNWSRSADAGQPSPEMRAGPGPVYTIIPCADGYVRLVVLSTRQWHAIRAWLDEPEYLQDPELDSFIGRMMIADAVLNPLYCELWAEMTMLEVCEEAQERGIVCTPILKPSEVLDNPHLESRNTFDEVALEDGRTMKLPSGWFEFDGERVGPTGRPPAVGQHTDEVFANL-----------------GD-ARPAPSAPLETAKPLAGVRVMDFGHGGVGVETGRMFGEYGADVVKIESRTYPDFIRVVLGGEMSPSFASSSRSKRSFG 810
            AGQ+ID S NE++AQITDWSLSNWSRSADAGQPS E RAGPG VYTIIPCADG+VRL+VLS RQWHAIR+WL EP+YLQDPELD+FIGR+MIADAVLNPLY EL++ MTM EV E+AQ RGIVCTP LKP +VL NPH ESRNTFD V ++DGRTMKLPSGWFE DGER GPTGRPP VG+HT EVFA+L                 G+ A+     P   A PL GVRVMDFGHGGVGVE GRMFGEYGADVVKIESR+Y DFIR VLGGEMSPSFASS+RSKRS G
Sbjct:  190 AGQVIDASVNESVAQITDWSLSNWSRSADAGQPSSEQRAGPGVVYTIIPCADGFVRLIVLSPRQWHAIRSWLGEPDYLQDPELDTFIGRLMIADAVLNPLYAELFSTMTMAEVSEQAQARGIVCTPFLKPDDVLVNPHFESRNTFDHVTIDDGRTMKLPSGWFEVDGERCGPTGRPPHVGEHTREVFASLWCGTGSEMRDQELAIIAGEWAQSEADHPTGKALPLRGVRVMDFGHGGVGVECGRMFGEYGADVVKIESRSYIDFIRAVLGGEMSPSFASSNRSKRSLG 477          
BLAST of mRNA_M-pyrifera_M_contig88993.20637.1 vs. uniprot
Match: A0A2D8GEY9_9ACTN (Uncharacterized protein n=8 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8GEY9_9ACTN)

HSP 1 Score: 402 bits (1033), Expect = 9.130e-132
Identity = 200/271 (73.80%), Postives = 223/271 (82.29%), Query Frame = 1
Query:    1 AGQLIDLSANEALAQITDWSLSNWSRSADAGQPSPEMRAGPGPVYTIIPCADGYVRLVVLSTRQWHAIRAWLDEPEYLQDPELDSFIGRMMIADAVLNPLYCELWAEMTMLEVCEEAQERGIVCTPILKPSEVLDNPHLESRNTFDEVALEDGRTMKLPSGWFEFDGERVGPTGRPPAVGQHTDEVFANLGDARPAPSAPLE-TAKPLAGVRVMDFGHGGVGVETGRMFGEYGADVVKIESRTYPDFIRVVLGGEMSPSFASSSRSKRSFG 810
            AGQ+IDLS NEA AQI DWSLSNW+RS DAG PS + R GPGPVYTI+PC DGYVRLV+++ R W A+RAWL EP+YLQDPE ++F+GR  IADAVLNPLY EL++ MTMLEV EE Q RGIVCTPILKP +VL NPH E+R +FD V  + G TM L SG+FE DGERVGP G PP +G+HTDEVFA LGD RPAP+APL     PLAG+RVMDFGHGGVGVE GRM  EYGADVVKIESRTYPDFIR VLGGEMSPSFASSSRSKRS G
Sbjct:  251 AGQVIDLSVNEAAAQIADWSLSNWTRSLDAGMPSLDSRIGPGPVYTILPCKDGYVRLVIIAERHWKAMRAWLGEPDYLQDPEYETFMGRFGIADAVLNPLYTELFSTMTMLEVAEECQNRGIVCTPILKPDDVLVNPHFEARGSFDHVETDAG-TMMLASGFFEIDGERVGPVGPPPVIGEHTDEVFAALGDTRPAPAAPLTGDDAPLAGIRVMDFGHGGVGVECGRMLAEYGADVVKIESRTYPDFIRTVLGGEMSPSFASSSRSKRSLG 520          
BLAST of mRNA_M-pyrifera_M_contig88993.20637.1 vs. uniprot
Match: A0A6N9EWI6_9ACTN (CoA transferase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N9EWI6_9ACTN)

HSP 1 Score: 375 bits (964), Expect = 5.670e-122
Identity = 195/275 (70.91%), Postives = 214/275 (77.82%), Query Frame = 1
Query:    1 AGQLIDLSANEALAQITDWSLSNWSRSADAGQPSPEMRAGPGPVYTIIPCADGYVRLVVLSTRQWHAIRAWLDEPEYLQDPELDSFIGRMMIADAVLNPLYCELWAEMTMLEVCEEAQERGIVCTPILKPSEVLDNPHLESRNTFDEVALEDGRTMKLPSGWFEFDGERVGPTGRPPAVGQHTDEVFANLGDA-RP----APSAPLETAKPLAGVRVMDFGHGGVGVETGRMFGEYGADVVKIESRTYPDFIRVVLGGEMSPSFASSSRSKRSFG 810
            AGQLID+SANEA AQITDWSL N S++   G    E+RAGPGPVYTI+  ADG+VRLVVLS RQW A+RAWL EP+YLQDPE D FI R MIADAVLNPLY EL++ MTM EV EEAQ RGIV TPILKP +V+ N H E+R TFD V L  G  M LPSGW E DGERVGPTGRPP +G+HTDEV A+L D  RP     P +  E   PLAG+RV DFGHGGVGVE  RM  EYGADV+KIESRTYPDFIRVVLGGEMSPSFASSSRSKR FG
Sbjct:  196 AGQLIDVSANEAAAQITDWSLPNSSKAMIEGVEPMEIRAGPGPVYTILAAADGFVRLVVLSPRQWQAMRAWLGEPDYLQDPEYDGFIARFMIADAVLNPLYEELFSTMTMEEVAEEAQRRGIVATPILKPGDVITNEHFEARKTFDRVPLFTGGLMSLPSGWMEIDGERVGPTGRPPHLGEHTDEVLASLEDGPRPDWPEVPESAPEPTLPLAGIRVADFGHGGVGVEISRMLAEYGADVIKIESRTYPDFIRVVLGGEMSPSFASSSRSKRGFG 470          
BLAST of mRNA_M-pyrifera_M_contig88993.20637.1 vs. uniprot
Match: A0A6B1EEW0_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1EEW0_9ACTN)

HSP 1 Score: 375 bits (962), Expect = 1.240e-121
Identity = 194/280 (69.29%), Postives = 212/280 (75.71%), Query Frame = 1
Query:    4 GQLIDLSANEALAQITDWSLSNWSRSADAGQPSPEMRAGPGPVYTIIPCADGYVRLVVLSTRQWHAIRAWLDEPEYLQDPELDSFIGRMMIADAVLNPLYCELWAEMTMLEVCEEAQERGIVCTPILKPSEVLDNPHLESRNTFDEVALEDGRTMKLPSGWFEFDGERVGPTGRPPAVGQHTDEVFANLGDA-----------RPAPSAPLETAKPLAGVRVMDFGHGGVGVETGRMFGEYGADVVKIESRTYPDFIRVVLGGEMSPSFASSSRSKRSFG 810
            GQLIDLSANEA AQITDWSL N S++   G    E+RAGPGPVYTI+  ADG+VRLVVLS RQWHA+RAWL EP+YLQDPE D FI R +IADAVLNPLY EL++ MTM EV EEAQ RGIV TPILKP +V+ N H E+R TFD V L  G TM LPSGW E DGERVGPTGRPP +G+HTDEV A L  A            P P    + A PL GVRV DFGHGGVGVE  RM  EYGADV+KIESRTYPDFIRV+LGGEMSPSFASSSRSKRS G
Sbjct:  197 GQLIDLSANEATAQITDWSLPNSSKAMVEGVDPTEIRAGPGPVYTILAAADGFVRLVVLSPRQWHAMRAWLGEPDYLQDPEYDGFISRFLIADAVLNPLYEELFSTMTMEEVAEEAQRRGIVATPILKPGDVITNEHFEARKTFDRVPLTTGGTMSLPSGWMETDGERVGPTGRPPHLGEHTDEVLAALDTAVLAKPGGLVAWPPVPDTAPDPALPLTGVRVADFGHGGVGVEISRMLAEYGADVIKIESRTYPDFIRVILGGEMSPSFASSSRSKRSLG 476          
BLAST of mRNA_M-pyrifera_M_contig88993.20637.1 vs. uniprot
Match: A0A7K2D758_9ACTN (CoA transferase n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2D758_9ACTN)

HSP 1 Score: 371 bits (953), Expect = 3.010e-120
Identity = 196/283 (69.26%), Postives = 217/283 (76.68%), Query Frame = 1
Query:    1 AGQLIDLSANEALAQITDWSLSNWSRSADAGQPSPEMRAGPGPVYTIIPCADGYVRLVVLSTRQWHAIRAWLDEPEYLQDPELDSFIGRMMIADAVLNPLYCELWAEMTMLEVCEEAQERGIVCTPILKPSEVLDNPHLESRNTFDEVALEDGRTMKLPSGWFEFDGERVGPTGRPPAVGQHTDEVFANL-GDARPAP------------SAPLETAKPLAGVRVMDFGHGGVGVETGRMFGEYGADVVKIESRTYPDFIRVVLGGEMSPSFASSSRSKRSFG 810
            AGQLID+SANEA AQITDWSL N S++   G    E+RAGPGPVYTI+  ADG+VRLVVLS RQW A+RAWL EP+YLQDPE D FI R +IADAVLNPLY EL++ MTM EV EEAQ RGIV TPILKP +V+ N HLE+R TFD V L  G  M LPSGW E DGERVGPTGRPP +G+HTDEV A L  +A P P            SAP E A PL+G+RV DFGHGGVGVE  RM  EYGADV+KIESRTYPDFIRV+LGGEMSPSFASSSRSKRS G
Sbjct:  196 AGQLIDVSANEAAAQITDWSLPNSSKAMIEGVEPMEIRAGPGPVYTILAAADGFVRLVVLSPRQWQAMRAWLGEPDYLQDPEYDGFISRFLIADAVLNPLYEELFSTMTMEEVSEEAQRRGIVATPILKPGDVITNDHLEARKTFDRVPLTTGGVMSLPSGWMETDGERVGPTGRPPHLGEHTDEVLAALDAEATPGPADGLVAWPPVPESAP-EPALPLSGIRVADFGHGGVGVEISRMLAEYGADVIKIESRTYPDFIRVILGGEMSPSFASSSRSKRSLG 477          
BLAST of mRNA_M-pyrifera_M_contig88993.20637.1 vs. uniprot
Match: A0A7K1BME7_9ACTN (CoA transferase (Fragment) n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A7K1BME7_9ACTN)

HSP 1 Score: 324 bits (831), Expect = 2.030e-105
Identity = 164/270 (60.74%), Postives = 198/270 (73.33%), Query Frame = 1
Query:    1 AGQLIDLSANEALAQITDWSLSNWSRSADAGQPSPEMRAGPGPVYTIIPCADGYVRLVVLSTRQWHAIRAWLDEPEYLQDPELDSFIGRMMIADAVLNPLYCELWAEMTMLEVCEEAQERGIVCTPILKPSEVLDNPHLESRNTFDEVALEDGRTMKLPSGWFEFDGERVGPTGRPPAVGQHTDEVFANLGDARPAPSAPLETAKPLAGVRVMDFGHGGVGVETGRMFGEYGADVVKIESRTYPDFIRVVLGGEMSPSFASSSRSKRSFG 810
            AGQL+D+S NE+L Q  DWSL N++    AG   PE RAG GPVY I  C DGYVRL+VLS  QW  +RAWL EPEYLQD E D+F GR  IADA+LNPLY EL+AE+++ EV  +AQERGIVCTP+      L N H  SR TF  + +  G T ++PSG+FEF+G RVGP   PPAVGQH D+VFA+LG+ R A + P  +  PL+G+RVMDFG G VGVE GR+FG YGADV+KIE+R++ DFIRVV G EM PSFASSSRSKR+ G
Sbjct:  197 AGQLLDVSLNESLLQCADWSLPNYTARVLAGNDFPEFRAGSGPVYPIFKCRDGYVRLIVLSPPQWREMRAWLGEPEYLQDEEYDTFPGRFAIADAILNPLYEELFAELSVEEVSAKAQERGIVCTPVYDAPRALSNEHFTSRGTFQSMEVAPGVTAQMPSGYFEFNGNRVGPKTPPPAVGQHNDQVFASLGEKRTASTRPAPSL-PLSGLRVMDFGQGAVGVEAGRLFGAYGADVIKIETRSHYDFIRVVTGTEMGPSFASSSRSKRALG 465          
BLAST of mRNA_M-pyrifera_M_contig88993.20637.1 vs. uniprot
Match: A0A6L6ELA1_9ACTN (Uncharacterized protein n=3 Tax=root TaxID=1 RepID=A0A6L6ELA1_9ACTN)

HSP 1 Score: 324 bits (830), Expect = 3.980e-102
Identity = 162/270 (60.00%), Postives = 196/270 (72.59%), Query Frame = 1
Query:    1 AGQLIDLSANEALAQITDWSLSNWSRSADAGQPSPEMRAGPGPVYTIIPCADGYVRLVVLSTRQWHAIRAWLDEPEYLQDPELDSFIGRMMIADAVLNPLYCELWAEMTMLEVCEEAQERGIVCTPILKPSEVLDNPHLESRNTFDEVALEDGRTMKLPSGWFEFDGERVGPTGRPPAVGQHTDEVFANLGDARPAPSAPLETAKPLAGVRVMDFGHGGVGVETGRMFGEYGADVVKIESRTYPDFIRVVLGGEMSPSFASSSRSKRSFG 810
            AGQL+D+S NE LAQ  DWSL N++    AG   PE+R G GPVY I  C DGYVRL+VLS  QW  +RAWL EPEYLQD E DSF GR  IA+A+LNPLY EL+A++T+ EV   AQ+RGIVCTP+      L N H +SR TF  + +  G   ++PSG+FE DGERVGP   PPA+G+HT EVFA+LGD R   SAP  +  PL G+RVMDFG G VGVE G++F EYGA+V+KIESR++ DFIRVV G EM PSFASSSRSK++ G
Sbjct:  190 AGQLLDISINECLAQTADWSLPNYTARVAAGSTFPELRMGSGPVYPIFKCRDGYVRLIVLSPAQWREMRAWLGEPEYLQDEEYDSFPGRFAIAEAILNPLYEELFADLTIEEVSAHAQDRGIVCTPVYDAPRALKNEHFDSRGTFQSMEIAPGVVAQMPSGFFELDGERVGPQSPPPAIGEHTAEVFASLGDQRVGTSAPAPSL-PLVGLRVMDFGQGAVGVEAGKLFAEYGAEVIKIESRSHYDFIRVVTGTEMGPSFASSSRSKKAMG 458          
BLAST of mRNA_M-pyrifera_M_contig88993.20637.1 vs. uniprot
Match: A0A7K1A4P3_9ACTN (Uncharacterized protein n=10 Tax=root TaxID=1 RepID=A0A7K1A4P3_9ACTN)

HSP 1 Score: 324 bits (830), Expect = 5.150e-102
Identity = 162/270 (60.00%), Postives = 201/270 (74.44%), Query Frame = 1
Query:    1 AGQLIDLSANEALAQITDWSLSNWSRSADAGQPSPEMRAGPGPVYTIIPCADGYVRLVVLSTRQWHAIRAWLDEPEYLQDPELDSFIGRMMIADAVLNPLYCELWAEMTMLEVCEEAQERGIVCTPILKPSEVLDNPHLESRNTFDEVALEDGRTMKLPSGWFEFDGERVGPTGRPPAVGQHTDEVFANLGDARPAPSAPLETAKPLAGVRVMDFGHGGVGVETGRMFGEYGADVVKIESRTYPDFIRVVLGGEMSPSFASSSRSKRSFG 810
            AGQL+D+S NE+L+Q  DWSL N++    AG   PE+R G GPVY I  C DGYVRL+VLS  QW  +RAWL EPEYLQD E D+F GR  IA+A+LNPLY EL+A++++ EV  +AQERGIVCTP+      L N H +SR TF  + L  G T +LPSG+FEF+G RVGP   PP++GQH ++VFA+LG+ R A +AP  +  PL G+RVMDFG G VGVE GR+FGEYGADV+KIE+R++ DFIRVV G EM PSFASSSRSKR+ G
Sbjct:  200 AGQLLDVSINESLSQCADWSLPNYTARVLAGSNFPEVRNGSGPVYPIFKCRDGYVRLIVLSPPQWREMRAWLGEPEYLQDEEYDTFPGRFAIAEAILNPLYEELFADLSVEEVSAKAQERGIVCTPVYDAPRALSNEHFDSRGTFQSMELAPGVTAQLPSGYFEFNGNRVGPQTPPPSIGQHNEQVFASLGEKRTASAAPAPSL-PLTGLRVMDFGQGAVGVEAGRLFGEYGADVIKIETRSHYDFIRVVTGTEMGPSFASSSRSKRALG 468          
BLAST of mRNA_M-pyrifera_M_contig88993.20637.1 vs. uniprot
Match: A0A6I3F279_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I3F279_9ACTN)

HSP 1 Score: 322 bits (824), Expect = 2.580e-101
Identity = 164/270 (60.74%), Postives = 195/270 (72.22%), Query Frame = 1
Query:    1 AGQLIDLSANEALAQITDWSLSNWSRSADAGQPSPEMRAGPGPVYTIIPCADGYVRLVVLSTRQWHAIRAWLDEPEYLQDPELDSFIGRMMIADAVLNPLYCELWAEMTMLEVCEEAQERGIVCTPILKPSEVLDNPHLESRNTFDEVALEDGRTMKLPSGWFEFDGERVGPTGRPPAVGQHTDEVFANLGDARPAPSAPLETAKPLAGVRVMDFGHGGVGVETGRMFGEYGADVVKIESRTYPDFIRVVLGGEMSPSFASSSRSKRSFG 810
            AGQL+D+S NEALAQ  DWSL N+S    AG  +PEMR G GPVY I  C DGYVRL+VLS  QW  +RAWL EPEYLQD E DSF GR  IADAVLNPLY EL+A M++ EV  +AQ RGIVCTP+      L N H +SR TF  + +  G T  +P+G+FE DG RVGP   PPA+GQHTD+VFA LG  R   + P  +  PLAG+RVMDFG G VGVE G++F EYGA+V+KIE+R++ DFIRVV G EM PSFASSSRSK++ G
Sbjct:  190 AGQLLDVSLNEALAQTADWSLPNYSARVAAGFDTPEMRMGSGPVYPIFKCRDGYVRLIVLSPPQWKEMRAWLGEPEYLQDEEYDSFPGRFAIADAVLNPLYEELFATMSVEEVSADAQNRGIVCTPVYDAPRALHNEHFDSRGTFTRMEVAPGVTASMPAGYFEIDGARVGPRSAPPAIGQHTDQVFAALGAKRSGVATPAPS-HPLAGLRVMDFGQGAVGVEAGKLFAEYGAEVIKIETRSHYDFIRVVTGTEMGPSFASSSRSKKALG 458          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88993.20637.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X6AQM8_9ACTN1.310e-15482.22Uncharacterized protein (Fragment) n=1 Tax=Actinom... [more]
A0A7K1ZDL7_9ACTN5.950e-13973.96CoA transferase n=2 Tax=Acidimicrobiaceae bacteriu... [more]
A0A2D8GEY9_9ACTN9.130e-13273.80Uncharacterized protein n=8 Tax=Acidimicrobiaceae ... [more]
A0A6N9EWI6_9ACTN5.670e-12270.91CoA transferase n=1 Tax=Acidimicrobiaceae bacteriu... [more]
A0A6B1EEW0_9ACTN1.240e-12169.29Uncharacterized protein n=1 Tax=Acidimicrobiaceae ... [more]
A0A7K2D758_9ACTN3.010e-12069.26CoA transferase n=5 Tax=Acidimicrobiaceae bacteriu... [more]
A0A7K1BME7_9ACTN2.030e-10560.74CoA transferase (Fragment) n=2 Tax=Actinobacteria ... [more]
A0A6L6ELA1_9ACTN3.980e-10260.00Uncharacterized protein n=3 Tax=root TaxID=1 RepID... [more]
A0A7K1A4P3_9ACTN5.150e-10260.00Uncharacterized protein n=10 Tax=root TaxID=1 RepI... [more]
A0A6I3F279_9ACTN2.580e-10160.74Uncharacterized protein n=2 Tax=root TaxID=1 RepID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88993contigM-pyrifera_M_contig88993:2..811 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score193.4
Seed ortholog evalue1.4e-46
Seed eggNOG ortholog1380390.JIAT01000001_gene5055
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944
EggNOG free text desc.PFAM L-carnitine dehydratase bile acid-inducible protein F
EggNOG OGs2GIU7@201174,4CRFS@84995,COG1804@1,COG1804@2
COG Functional cat.C
Best tax levelRubrobacteria
Best eggNOG OGNA|NA|NA
Exons1
Model size810
Cds size810
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816799.688431-CDS-M-pyrifera_M_contig88993:1..8111622816799.688431-CDS-M-pyrifera_M_contig88993:1..811Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88993 2..811 +
1692278185.9110153-CDS-M-pyrifera_M_contig88993:1..8111692278185.9110153-CDS-M-pyrifera_M_contig88993:1..811Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88993 2..811 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88993.20637.1prot_M-pyrifera_M_contig88993.20637.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig88993 2..811 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig88993.20637.1

>prot_M-pyrifera_M_contig88993.20637.1 ID=prot_M-pyrifera_M_contig88993.20637.1|Name=mRNA_M-pyrifera_M_contig88993.20637.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=270bp
AGQLIDLSANEALAQITDWSLSNWSRSADAGQPSPEMRAGPGPVYTIIPC
ADGYVRLVVLSTRQWHAIRAWLDEPEYLQDPELDSFIGRMMIADAVLNPL
YCELWAEMTMLEVCEEAQERGIVCTPILKPSEVLDNPHLESRNTFDEVAL
EDGRTMKLPSGWFEFDGERVGPTGRPPAVGQHTDEVFANLGDARPAPSAP
LETAKPLAGVRVMDFGHGGVGVETGRMFGEYGADVVKIESRTYPDFIRVV
LGGEMSPSFASSSRSKRSFG
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mRNA from alignment at M-pyrifera_M_contig88993:2..811+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig88993.20637.1 ID=mRNA_M-pyrifera_M_contig88993.20637.1|Name=mRNA_M-pyrifera_M_contig88993.20637.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=810bp|location=Sequence derived from alignment at M-pyrifera_M_contig88993:2..811+ (Macrocystis pyrifera P11B4 male)
GCCGGTCAGCTGATCGATCTCTCGGCCAACGAGGCGCTCGCCCAGATCAC CGACTGGTCGCTGTCGAACTGGAGCCGTTCCGCCGACGCCGGCCAGCCCT CGCCCGAGATGCGGGCCGGGCCGGGACCCGTCTACACGATCATTCCGTGC GCCGACGGCTATGTCCGACTGGTGGTGCTCAGCACCCGCCAGTGGCACGC GATCCGGGCCTGGTTGGACGAACCCGAGTATCTCCAGGACCCCGAACTCG ACAGCTTCATCGGCCGGATGATGATCGCCGATGCCGTGCTCAACCCGCTC TACTGCGAGCTGTGGGCCGAGATGACCATGCTCGAGGTGTGCGAGGAAGC CCAGGAACGCGGCATCGTCTGCACGCCGATCCTCAAGCCGTCGGAAGTGC TCGACAACCCCCACCTGGAGAGCCGCAACACGTTCGACGAGGTCGCCCTC GAGGACGGCCGCACCATGAAGCTGCCCTCGGGCTGGTTCGAGTTCGACGG CGAGCGCGTGGGACCGACCGGGCGTCCGCCTGCCGTGGGCCAACACACCG ACGAGGTGTTCGCGAACCTGGGCGACGCTCGCCCGGCGCCGTCCGCCCCG CTCGAGACGGCCAAGCCGCTGGCCGGCGTGCGGGTGATGGACTTCGGCCA TGGCGGTGTCGGCGTCGAGACCGGCCGCATGTTCGGCGAATACGGAGCCG ACGTCGTCAAGATCGAAAGCCGCACCTATCCGGACTTCATCCGGGTGGTA CTCGGCGGTGAGATGTCGCCGTCGTTCGCGTCGTCGAGTCGGAGCAAGCG CTCCTTCGGG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig88993:2..811+

>mRNA_M-pyrifera_M_contig88993.20637.1 ID=mRNA_M-pyrifera_M_contig88993.20637.1|Name=mRNA_M-pyrifera_M_contig88993.20637.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1620bp|location=Sequence derived from alignment at M-pyrifera_M_contig88993:2..811+ (Macrocystis pyrifera P11B4 male)
GCCGGTCAGCTGATCGATCTCTCGGCCAACGAGGCGCTCGCCCAGATCAC
CGACTGGTCGCTGTCGAACTGGAGCCGTTCCGCCGACGCCGGCCAGCCCT
CGCCCGAGATGCGGGCCGGGCCGGGACCCGTCTACACGATCATTCCGTGC
GCCGACGGCTATGTCCGACTGGTGGTGCTCAGCACCCGCCAGTGGCACGC
GATCCGGGCCTGGTTGGACGAACCCGAGTATCTCCAGGACCCCGAACTCG
ACAGCTTCATCGGCCGGATGATGATCGCCGATGCCGTGCTCAACCCGCTC
TACTGCGAGCTGTGGGCCGAGATGACCATGCTCGAGGTGTGCGAGGAAGC
CCAGGAACGCGGCATCGTCTGCACGCCGATCCTCAAGCCGTCGGAAGTGC
TCGACAACCCCCACCTGGAGAGCCGCAACACGTTCGACGAGGTCGCCCTC
GAGGACGGCCGCACCATGAAGCTGCCCTCGGGCTGGTTCGAGTTCGACGG
CGAGCGCGTGGGACCGACCGGGCGTCCGCCTGCCGTGGGCCAACACACCG
ACGAGGTGTTCGCGAACCTGGGCGACGCTCGCCCGGCGCCGTCCGCCCCG
CTCGAGACGGCCAAGCCGCTGGCCGGCGTGCGGGTGATGGACTTCGGCCA
TGGCGGTGTCGGCGTCGAGACCGGCCGCATGTTCGGCGAATACGGAGCCG
ACGTCGTCAAGATCGAAAGCCGCACCTATCCGGACTTCATCCGGGTGGTA
CTCGGCGGTGAGATGTCGCCGTCGTTCGCGTCGTCGAGTCGGAGCAAGCG
CTCCTTCGGGGCCGGTCAGCTGATCGATCTCTCGGCCAACGAGGCGCTCG
CCCAGATCACCGACTGGTCGCTGTCGAACTGGAGCCGTTCCGCCGACGCC
GGCCAGCCCTCGCCCGAGATGCGGGCCGGGCCGGGACCCGTCTACACGAT
CATTCCGTGCGCCGACGGCTATGTCCGACTGGTGGTGCTCAGCACCCGCC
AGTGGCACGCGATCCGGGCCTGGTTGGACGAACCCGAGTATCTCCAGGAC
CCCGAACTCGACAGCTTCATCGGCCGGATGATGATCGCCGATGCCGTGCT
CAACCCGCTCTACTGCGAGCTGTGGGCCGAGATGACCATGCTCGAGGTGT
GCGAGGAAGCCCAGGAACGCGGCATCGTCTGCACGCCGATCCTCAAGCCG
TCGGAAGTGCTCGACAACCCCCACCTGGAGAGCCGCAACACGTTCGACGA
GGTCGCCCTCGAGGACGGCCGCACCATGAAGCTGCCCTCGGGCTGGTTCG
AGTTCGACGGCGAGCGCGTGGGACCGACCGGGCGTCCGCCTGCCGTGGGC
CAACACACCGACGAGGTGTTCGCGAACCTGGGCGACGCTCGCCCGGCGCC
GTCCGCCCCGCTCGAGACGGCCAAGCCGCTGGCCGGCGTGCGGGTGATGG
ACTTCGGCCATGGCGGTGTCGGCGTCGAGACCGGCCGCATGTTCGGCGAA
TACGGAGCCGACGTCGTCAAGATCGAAAGCCGCACCTATCCGGACTTCAT
CCGGGTGGTACTCGGCGGTGAGATGTCGCCGTCGTTCGCGTCGTCGAGTC
GGAGCAAGCGCTCCTTCGGG
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