mRNA_M-pyrifera_M_contig88983.20635.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig88983.20635.1
Unique NamemRNA_M-pyrifera_M_contig88983.20635.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig88983.20635.1 vs. uniprot
Match: A0A3D5DEL2_9GAMM (Cytochrome c domain-containing protein (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DEL2_9GAMM)

HSP 1 Score: 381 bits (978), Expect = 1.060e-126
Identity = 175/245 (71.43%), Postives = 205/245 (83.67%), Query Frame = 1
Query:   52 PEHSAGGEWPSYNKTLDGQRWSPLTQINTANAGELGEVCRYKVADNGSFQAGPIVIENVMYLTTATDTLAMDPTNCKVLWRHRHRRDRAAPFPVNRGVAYYAGRLFRGTDDGQVIALDARSGAELWANTVGNPGEGEIVTGAPLAWNGILIVGTAVSEFGVRGRVIAYDTMTGRELWRFHTVPAPGEPNADTWRNTIWNDTGGGGGGTWSHFALDPSTAEVFIPVANPIPDFVPAERPGDNLYTN 786
            P+ + GGEW SYNK+L GQR+S L QINT N   L EVC+ ++AD GSFQAG +VI+ VMY TTATDT+A++P NC+++WRHR+ R+  +P  VNRGVAYY GRLFRG+DDG+V ALDAR+G ELW N VG    GE+V+GAPLAWNGI+IVGTAVSEFGVRGRVIAYD M+GRELW F TVP PGEP ++TWRNT+WND GGGGGGTWSHFALDPS+ E+FIPV NPIPDFVPAER GDNLYTN
Sbjct:    9 PDGATGGEWRSYNKSLSGQRYSLLGQINTNNVDSLAEVCKTRLADQGSFQAGLLVIDGVMYATTATDTVALNPVNCEIIWRHRYDREEPSPLSVNRGVAYYGGRLFRGSDDGRVYALDARTGTELWTNIVGEAALGEMVSGAPLAWNGIVIVGTAVSEFGVRGRVIAYDAMSGRELWNFDTVPRPGEPGSETWRNTVWNDAGGGGGGTWSHFALDPSSGELFIPVGNPIPDFVPAERLGDNLYTN 253          
BLAST of mRNA_M-pyrifera_M_contig88983.20635.1 vs. uniprot
Match: A0A521RH79_9GAMM (C-type cytochrome n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A521RH79_9GAMM)

HSP 1 Score: 292 bits (748), Expect = 1.370e-91
Identity = 137/256 (53.52%), Postives = 179/256 (69.92%), Query Frame = 1
Query:   22 AAEQAPDSNLPEHSAGGEWPSYNKTLDGQRWSPLTQINTANAGELGEVCRYKVADNGSFQAGPIVIENVMYLTTATDTLAMDPTNCKVLWRHRHRRDRAAPFPVNRGVAYYAGRLFRGTDDGQVIALDARSGAELWANTVGNPGEGEIVTGAPLAWNGILIVGTAVSEFGVRGRVIAYDTMTGRELWRFHTVPAPGEPNADTWRNTIWNDTGGGGGGTWSHFALDPSTAEVFIPVANPIPDFVPAERPGDNLYTNS 789
            AAE AP  + P    G +W  YNKTL+GQR+SPL QI  ANAGEL EVCR +VA  GSFQ+G +V+ + ++ TT+T T A+DP  C+++W H +RR +      NRGVAY  GR+FRGTDD ++IALDA +G E+W N VG+   GE V GAP+AWNG++  G   SEFG+RGR++A+D +TGRE+WRFHTVP      ADTW +  W + GGGG  TWS   +DP T E+F P+ NP+PD+ P +R G NL+TNS
Sbjct:   56 AAEPAPPPSAP---TGADWEGYNKTLEGQRYSPLDQITVANAGELREVCRVRVATRGSFQSGLVVVGDSLFATTSTGTFAIDPVTCEMIWHHVYRRAQPPGLQGNRGVAYLNGRVFRGTDDARLIALDAATGREVWTNVVGDASIGEYVVGAPIAWNGLVFAGIGGSEFGIRGRILAFDALTGREVWRFHTVPTGDAVGADTWGDRKWAEHGGGG--TWSTITIDPRTGELFAPIGNPVPDYAPQDRVGANLFTNS 306          
BLAST of mRNA_M-pyrifera_M_contig88983.20635.1 vs. uniprot
Match: UPI00069C8E58 (PQQ-binding-like beta-propeller repeat protein n=1 Tax=Acidisphaera rubrifaciens TaxID=50715 RepID=UPI00069C8E58)

HSP 1 Score: 284 bits (726), Expect = 9.220e-90
Identity = 135/239 (56.49%), Postives = 169/239 (70.71%), Query Frame = 1
Query:   73 EWPSYNKTLDGQRWSPLTQINTANAGELGEVCRYKVADNGSFQAGPIVIENVMYLTTATDTLAMDPTNCKVLWRHRHRRDRAAPFPVNRGVAYYAGRLFRGTDDGQVIALDARSGAELWANTVGNPGEGEIVTGAPLAWNGILIVGTAVSEFGVRGRVIAYDTMTGRELWRFHTVPAPGEPNADTWRNTIWNDTGGGGGGTWSHFALDPSTAEVFIPVANPIPDFVPAERPGDNLYTNS 789
            +WP YN     QR+SPL QI   N   L EVCR KV+D GSF  GPIV++ VMY+TTA DT+A+DP  C+  WR+ +       + VNRGVAY  GRLFRGT DG ++A+DA +G  +W +TVG+PG GE ++GAP+AWNG++  GTA S++GVRGRV+A+D  TGRELWRF+ VPAPGE  ADTW+ +    TGGGG  TW+ FALD    E+ IPV NP PD  P  RPGDNLYT+S
Sbjct:   42 DWPGYNNDYQAQRYSPLNQITAKNVDHLKEVCRIKVSDGGSFHTGPIVVDGVMYVTTARDTVAIDPRTCQEKWRNTYSSSHDDVWSVNRGVAYDNGRLFRGTGDGALLAIDAATGKTVWQDTVGDPGRGEFLSGAPVAWNGVVYTGTAGSDWGVRGRVVAFDAQTGRELWRFNLVPAPGEAGADTWKVSKTALTGGGG--TWTSFALDVMRNELVIPVGNPAPDLDPQYRPGDNLYTDS 278          
BLAST of mRNA_M-pyrifera_M_contig88983.20635.1 vs. uniprot
Match: UPI0003B75B8C (PQQ-binding-like beta-propeller repeat protein n=1 Tax=Nevskia ramosa TaxID=64002 RepID=UPI0003B75B8C)

HSP 1 Score: 276 bits (707), Expect = 7.880e-86
Identity = 128/252 (50.79%), Postives = 174/252 (69.05%), Query Frame = 1
Query:   34 APDSNLPEHSAGGEWPSYNKTLDGQRWSPLTQINTANAGELGEVCRYKVADNGSFQAGPIVIENVMYLTTATDTLAMDPTNCKVLWRHRHRRDRAAPFPVNRGVAYYAGRLFRGTDDGQVIALDARSGAELWANTVGNPGEGEIVTGAPLAWNGILIVGTAVSEFGVRGRVIAYDTMTGRELWRFHTVPAPGEPNADTWRNTIWNDTGGGGGGTWSHFALDPSTAEVFIPVANPIPDFVPAERPGDNLYTNS 789
            AP +  P   A   W SYN T DGQR++   QI  ANAG+L E CR K+ D GSF  G + ++ V+YLTTA DT+A+D +NC   WRH ++ ++   FPVNRGVAY  G+LFRGT DG+++A+DA +G  +W   VG+P +GE  + AP+ W G+LI+G+A S++GVRGR++AYD   GRE+WRF+T+P   EP A+TW          GGGG+W+H+++D ST EVF+PV NP PD +P  RPG NLYT+S
Sbjct:   25 APHAEEPAPPADSNWLSYNGTADGQRYALPAQITPANAGQLAEHCRIKLDDAGSFHTGLVQLDGVLYLTTAQDTIALDASNCTQRWRHHYKPEQPEVFPVNRGVAYANGKLFRGTSDGRLLAIDATTGKTIWQQQVGDPLQGEFFSAAPIVWQGLLIIGSAGSDWGVRGRIMAYDQANGREIWRFNTIPRGKEPGAETWHER--GTARYGGGGSWTHYSIDMSTGEVFVPVGNPAPDILPGHRPGANLYTDS 274          
BLAST of mRNA_M-pyrifera_M_contig88983.20635.1 vs. uniprot
Match: A0A431QFA5_9BRAD (Pyrrolo-quinoline quinone n=4 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A431QFA5_9BRAD)

HSP 1 Score: 272 bits (695), Expect = 5.170e-85
Identity = 135/263 (51.33%), Postives = 177/263 (67.30%), Query Frame = 1
Query:    1 ATAGVGRAAEQAPDSNLPEHSAGGEWPSYNKTLDGQRWSPLTQINTANAGELGEVCRYKVADNGSFQAGPIVIENVMYLTTATDTLAMDPTNCKVLWRHRHRRDRAAPFPVNRGVAYYAGRLFRGTDDGQVIALDARSGAELWANTVGNPGEGEIVTGAPLAWNGILIVGTAVSEFGVRGRVIAYDTMTGRELWRFHTVPAPGEPNADTWRNTIWNDTGGGGGGTWSHFALDPSTAEVFIPVANPIPDFVPAERPGDNLYTNS 789
            A AGVG   +    + L +  AG +WP+YN    GQR+  L QINT N  EL EVCR ++ + G FQ GP+VI+ VMY+TTA  T A+D   CK  WRH +   R   +PVNRGVA   GR+ RGT DG ++ALDA+SGA +W N VG+   GE ++GAP+ WNG++   TA S++GVRGRV+A+D +TGRE+WRF T+P   +P A+TW+N     TGGGG  +WS  +LD +T E+F+PV NP PD  P  RPGDNLYT+S
Sbjct:   18 ALAGVGLLVQ----ATLVQAGAGVDWPAYNNDYMGQRYQRLKQINTRNVAELKEVCRVQLQEGGPFQTGPVVIDGVMYVTTARLTFALDAATCKEKWRHAYESAREDVWPVNRGVAVINGRVIRGTPDGHLLALDAQSGALIWQNMVGDSLLGEFLSGAPIGWNGLVFTATAGSDWGVRGRVLAFDVLTGREVWRFDTIPTGDQPGAETWQNKKSALTGGGG--SWSTLSLDITTGELFVPVGNPAPDMFPDYRPGDNLYTDS 274          
BLAST of mRNA_M-pyrifera_M_contig88983.20635.1 vs. uniprot
Match: UPI001D17E664 (PQQ-binding-like beta-propeller repeat protein n=1 Tax=Aromatoleum toluclasticum TaxID=92003 RepID=UPI001D17E664)

HSP 1 Score: 272 bits (695), Expect = 5.890e-85
Identity = 124/242 (51.24%), Postives = 169/242 (69.83%), Query Frame = 1
Query:   64 AGGEWPSYNKTLDGQRWSPLTQINTANAGELGEVCRYKVADNGSFQAGPIVIENVMYLTTATDTLAMDPTNCKVLWRHRHRRDRAAPFPVNRGVAYYAGRLFRGTDDGQVIALDARSGAELWANTVGNPGEGEIVTGAPLAWNGILIVGTAVSEFGVRGRVIAYDTMTGRELWRFHTVPAPGEPNADTWRNTIWNDTGGGGGGTWSHFALDPSTAEVFIPVANPIPDFVPAERPGDNLYTNS 789
            AG  WP Y+K   GQR+S L +I+ +N   L E+CR  ++D GS Q GP+V+  VMY+TTA DT+A+DPTNC V W+  +      PFPVNRGVAY  G LFRGT DG ++ALDA++G  +W NTV +   GE +  AP+AWNG++ +G+A S++G+RGR++A+D  TGRE WRF+T+P   E  A+TW+  +      GGGGTW+ + LD  + E+F+PV NP PD +P ERPGDNL+TNS
Sbjct:   42 AGAHWPVYHKDYAGQRFSALDEIDVSNVASLREICRVPLSDGGSLQTGPLVVAGVMYVTTARDTIALDPTNCNVHWKSEYNPVGYEPFPVNRGVAYLNGMLFRGTPDGHLLALDAKTGKVIWDNTVVDSSYGEFLAAAPIAWNGLVYIGSAGSDWGIRGRMMAFDAQTGREAWRFYTIPRGKEKGAETWK--MPESAKFGGGGTWTSYTLDVRSGELFVPVGNPAPDLLPDERPGDNLFTNS 281          
BLAST of mRNA_M-pyrifera_M_contig88983.20635.1 vs. uniprot
Match: A0A4R7PB56_9GAMM (Glucose dehydrogenase n=1 Tax=Panacagrimonas perspica TaxID=381431 RepID=A0A4R7PB56_9GAMM)

HSP 1 Score: 269 bits (687), Expect = 7.420e-83
Identity = 123/252 (48.81%), Postives = 173/252 (68.65%), Query Frame = 1
Query:   34 APDSNLPEHSAGGEWPSYNKTLDGQRWSPLTQINTANAGELGEVCRYKVADNGSFQAGPIVIENVMYLTTATDTLAMDPTNCKVLWRHRHRRDRAAPFPVNRGVAYYAGRLFRGTDDGQVIALDARSGAELWANTVGNPGEGEIVTGAPLAWNGILIVGTAVSEFGVRGRVIAYDTMTGRELWRFHTVPAPGEPNADTWRNTIWNDTGGGGGGTWSHFALDPSTAEVFIPVANPIPDFVPAERPGDNLYTNS 789
            A DS  P  +A  EWPSYN T+DGQR++ L QIN  NA  LGEVCRYK  + G+FQ G + +  V+Y  +  DTLA+D T+C V WRH +  ++   + +NRGVAY  G +FRGT D +++A+DA++G  +W + VG+P +GE  + AP  + G+LI+G A  ++G+RGRV+A+D +TGRE+WRF+T+P   E  A+TW+N        GGGGTW+ + LD +  EVF+PV NP PDF+P  RPG+NLY +S
Sbjct:   22 AADSPTPGIAADTEWPSYNGTVDGQRYAALDQINVGNAARLGEVCRYKAEEAGTFQTGLVQVGGVIYFASPLDTLAVDATDCSVRWRHHYTPEQTPVWLINRGVAYSNGMIFRGTPDARLLAIDAQTGKTIWQHQVGDPTQGEFFSAAPQVYQGLLIIGAAGGDWGIRGRVMAFDQVTGREVWRFNTIPRGDEKGAETWKNV--GSARYGGGGTWTTYTLDMAAGEVFVPVGNPTPDFIPGHRPGENLYADS 271          
BLAST of mRNA_M-pyrifera_M_contig88983.20635.1 vs. uniprot
Match: A0A158DLW7_9BURK (Putative quinoprotein decanol dehydrogenase n=3 Tax=Burkholderiaceae TaxID=119060 RepID=A0A158DLW7_9BURK)

HSP 1 Score: 266 bits (679), Expect = 1.310e-82
Identity = 121/238 (50.84%), Postives = 165/238 (69.33%), Query Frame = 1
Query:   76 WPSYNKTLDGQRWSPLTQINTANAGELGEVCRYKVADNGSFQAGPIVIENVMYLTTATDTLAMDPTNCKVLWRHRHRRDRAAPFPVNRGVAYYAGRLFRGTDDGQVIALDARSGAELWANTVGNPGEGEIVTGAPLAWNGILIVGTAVSEFGVRGRVIAYDTMTGRELWRFHTVPAPGEPNADTWRNTIWNDTGGGGGGTWSHFALDPSTAEVFIPVANPIPDFVPAERPGDNLYTNS 789
            WP+Y+     QR+S LTQINT N  +L E+CR  ++D GS QAGPI+++  MY+TTA DT A+DPTNC+ LW+  ++     PFPVNRG AY  G LFRGT DG +IALDA++G+++W N + +   GE  + AP+AWNG++ +G A  ++G+RGR++AYD  TGRELWRF+T+P   E  A+TW+    +  GGGG  TWS + LD    E+F+ V NP  D +P ER GDNL+TNS
Sbjct:   42 WPTYHNDYAAQRYSHLTQINTKNVTQLKEICRLVLSDGGSLQAGPILVDGTMYVTTALDTFAIDPTNCQSLWKSSYKPLTHMPFPVNRGAAYLNGLLFRGTPDGHLIALDAKTGSKVWDNVIADTSYGEFASAAPIAWNGMVFMGIAGGDWGIRGRIMAYDAQTGRELWRFNTIPRGKEVGAETWKKATASQIGGGG--TWSSYTLDVRAGELFVSVGNPAQDMLPDERVGDNLFTNS 277          
BLAST of mRNA_M-pyrifera_M_contig88983.20635.1 vs. uniprot
Match: A0A7Y4X390_9DELT (PQQ-binding-like beta-propeller repeat protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7Y4X390_9DELT)

HSP 1 Score: 268 bits (686), Expect = 1.410e-82
Identity = 122/238 (51.26%), Postives = 169/238 (71.01%), Query Frame = 1
Query:   76 WPSYNKTLDGQRWSPLTQINTANAGELGEVCRYKVADNGSFQAGPIVIENVMYLTTATDTLAMDPTNCKVLWRHRHRRDRAAPFPVNRGVAYYAGRLFRGTDDGQVIALDARSGAELWANTVGNPGEGEIVTGAPLAWNGILIVGTAVSEFGVRGRVIAYDTMTGRELWRFHTVPAPGEPNADTWRNTIWNDTGGGGGGTWSHFALDPSTAEVFIPVANPIPDFVPAERPGDNLYTNS 789
            W SYN T++GQR+S L QINT N   L EVCR K+ D+G+FQAG + I+  +Y+T A DT+A+D TNC V WRH ++ ++   F +NRGVAY  GRLFRGT D +++A+DA +G  LW   +G+P  GE ++  P  W G+LI GTA S++G+RGR++AY+  TGRE+WRF+T+P   E  A+TW N   +    GGGG+W+ + LD ++ EVF+PV NP PDFVP+ RPG NL+T+S
Sbjct:   37 WMSYNGTVNGQRYSSLDQINTKNVASLAEVCRLKIDDSGTFQAGLVQIDGTLYMTNAHDTIAVDATNCTVRWRHVYKPEQEDVFQINRGVAYANGRLFRGTPDARLLAIDAATGKTLWQQQIGDPAVGEFLSSVPAVWQGLLIAGTAGSDWGIRGRIMAYEQETGREVWRFYTIPRGKETGAETWTNR--DSARYGGGGSWTTYTLDMASGEVFVPVGNPAPDFVPSHRPGANLFTDS 272          
BLAST of mRNA_M-pyrifera_M_contig88983.20635.1 vs. uniprot
Match: W7VSZ5_9BURK (Quinohemoprotein ethanol dehydrogenase type-1 n=2 Tax=unclassified Methylibium TaxID=2633235 RepID=W7VSZ5_9BURK)

HSP 1 Score: 267 bits (682), Expect = 4.100e-82
Identity = 125/239 (52.30%), Postives = 168/239 (70.29%), Query Frame = 1
Query:   73 EWPSYNKTLDGQRWSPLTQINTANAGELGEVCRYKVADNGSFQAGPIVIENVMYLTTATDTLAMDPTNCKVLWRHRHRRDRAAPFPVNRGVAYYAGRLFRGTDDGQVIALDARSGAELWANTVGNPGEGEIVTGAPLAWNGILIVGTAVSEFGVRGRVIAYDTMTGRELWRFHTVPAPGEPNADTWRNTIWNDTGGGGGGTWSHFALDPSTAEVFIPVANPIPDFVPAERPGDNLYTNS 789
            +WPSYN T DGQR++   QIN  NA +LGEVCR KVAD G+FQ+G + I  ++YLTTA DT A+D TNC V WRH +  ++   + VNRGVAY  G++FRGT D +++A+DA SG  +W + VG+P  GE  + AP  + G+LI+G A  ++G RGRV+A+D  TGRE+WRF+T+P   E  A+TW+N        GGGGTW+ + LD ++ EVF+PV NP PDF+PA RPG NL+ NS
Sbjct:   33 QWPSYNLTADGQRFAAADQINVKNAAQLGEVCRIKVADAGTFQSGLVQIGGLIYLTTALDTFAIDATNCSVRWRHSYTPEQEVVWSVNRGVAYSNGKIFRGTPDARLLAIDALSGKTVWQHQVGDPQLGEFFSAAPQVFQGLLIIGAAGGDWGTRGRVMAFDAETGREVWRFNTIPRGKETGAETWKNV--GTARYGGGGTWTSYTLDMASGEVFVPVGNPAPDFIPAHRPGLNLFANS 269          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88983.20635.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D5DEL2_9GAMM1.060e-12671.43Cytochrome c domain-containing protein (Fragment) ... [more]
A0A521RH79_9GAMM1.370e-9153.52C-type cytochrome n=1 Tax=Gammaproteobacteria bact... [more]
UPI00069C8E589.220e-9056.49PQQ-binding-like beta-propeller repeat protein n=1... [more]
UPI0003B75B8C7.880e-8650.79PQQ-binding-like beta-propeller repeat protein n=1... [more]
A0A431QFA5_9BRAD5.170e-8551.33Pyrrolo-quinoline quinone n=4 Tax=Bradyrhizobiacea... [more]
UPI001D17E6645.890e-8551.24PQQ-binding-like beta-propeller repeat protein n=1... [more]
A0A4R7PB56_9GAMM7.420e-8348.81Glucose dehydrogenase n=1 Tax=Panacagrimonas persp... [more]
A0A158DLW7_9BURK1.310e-8250.84Putative quinoprotein decanol dehydrogenase n=3 Ta... [more]
A0A7Y4X390_9DELT1.410e-8251.26PQQ-binding-like beta-propeller repeat protein n=1... [more]
W7VSZ5_9BURK4.100e-8252.30Quinohemoprotein ethanol dehydrogenase type-1 n=2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88983contigM-pyrifera_M_contig88983:24..812 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score278.9
Seed ortholog evalue2.5e-72
Seed eggNOG ortholog1122603.ATVI01000006_gene651
Hectar predicted targeting categoryother localisation
EggNOG free text desc.PQQ-like domain
EggNOG OGs1MUQX@1224,1RN5D@1236,1X9EV@135614,COG2010@1,COG2010@2,COG4993@1,COG4993@2
COG Functional cat.CG
Best tax levelXanthomonadales
Best eggNOG OGNA|NA|NA
Exons1
Model size789
Cds size789
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816799.613803-CDS-M-pyrifera_M_contig88983:23..8121622816799.613803-CDS-M-pyrifera_M_contig88983:23..812Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88983 24..812 +
1692278185.8791327-CDS-M-pyrifera_M_contig88983:23..8121692278185.8791327-CDS-M-pyrifera_M_contig88983:23..812Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88983 24..812 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88983.20635.1prot_M-pyrifera_M_contig88983.20635.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig88983 24..812 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig88983.20635.1

>prot_M-pyrifera_M_contig88983.20635.1 ID=prot_M-pyrifera_M_contig88983.20635.1|Name=mRNA_M-pyrifera_M_contig88983.20635.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=263bp
ATAGVGRAAEQAPDSNLPEHSAGGEWPSYNKTLDGQRWSPLTQINTANAG
ELGEVCRYKVADNGSFQAGPIVIENVMYLTTATDTLAMDPTNCKVLWRHR
HRRDRAAPFPVNRGVAYYAGRLFRGTDDGQVIALDARSGAELWANTVGNP
GEGEIVTGAPLAWNGILIVGTAVSEFGVRGRVIAYDTMTGRELWRFHTVP
APGEPNADTWRNTIWNDTGGGGGGTWSHFALDPSTAEVFIPVANPIPDFV
PAERPGDNLYTNS
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mRNA from alignment at M-pyrifera_M_contig88983:24..812+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig88983.20635.1 ID=mRNA_M-pyrifera_M_contig88983.20635.1|Name=mRNA_M-pyrifera_M_contig88983.20635.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=789bp|location=Sequence derived from alignment at M-pyrifera_M_contig88983:24..812+ (Macrocystis pyrifera P11B4 male)
GCCACTGCCGGCGTCGGCCGCGCCGCGGAACAAGCCCCGGATTCGAACCT CCCGGAACACAGTGCCGGCGGCGAATGGCCAAGCTACAACAAGACCCTGG ACGGGCAACGCTGGTCACCACTGACCCAGATCAACACGGCGAACGCGGGC GAACTCGGCGAGGTGTGCCGTTACAAGGTCGCGGACAACGGCTCGTTCCA GGCCGGACCCATCGTCATCGAGAACGTCATGTACCTGACGACCGCTACCG ATACGCTGGCGATGGATCCGACGAACTGCAAGGTGCTGTGGCGCCATCGT CACCGTCGCGATCGCGCGGCGCCGTTTCCCGTCAACCGCGGTGTCGCCTA TTACGCGGGGCGGTTGTTTCGCGGCACGGACGACGGCCAGGTGATCGCGC TCGACGCCCGCAGTGGCGCGGAGTTGTGGGCGAACACGGTCGGCAACCCG GGCGAGGGCGAGATTGTGACCGGCGCGCCGCTCGCGTGGAACGGCATCCT CATCGTCGGCACCGCGGTGTCGGAGTTCGGCGTGCGCGGACGGGTTATTG CGTACGACACGATGACCGGACGCGAACTGTGGCGCTTCCACACGGTGCCC GCACCGGGCGAGCCGAATGCCGATACGTGGCGCAATACGATCTGGAACGA CACCGGCGGGGGCGGCGGTGGCACGTGGTCGCATTTCGCGCTCGACCCGT CGACAGCCGAAGTGTTCATCCCGGTCGCGAACCCGATCCCCGATTTCGTG CCGGCCGAACGTCCCGGCGACAATCTGTATACGAACTCG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig88983:24..812+

>mRNA_M-pyrifera_M_contig88983.20635.1 ID=mRNA_M-pyrifera_M_contig88983.20635.1|Name=mRNA_M-pyrifera_M_contig88983.20635.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1578bp|location=Sequence derived from alignment at M-pyrifera_M_contig88983:24..812+ (Macrocystis pyrifera P11B4 male)
GCCACTGCCGGCGTCGGCCGCGCCGCGGAACAAGCCCCGGATTCGAACCT
CCCGGAACACAGTGCCGGCGGCGAATGGCCAAGCTACAACAAGACCCTGG
ACGGGCAACGCTGGTCACCACTGACCCAGATCAACACGGCGAACGCGGGC
GAACTCGGCGAGGTGTGCCGTTACAAGGTCGCGGACAACGGCTCGTTCCA
GGCCGGACCCATCGTCATCGAGAACGTCATGTACCTGACGACCGCTACCG
ATACGCTGGCGATGGATCCGACGAACTGCAAGGTGCTGTGGCGCCATCGT
CACCGTCGCGATCGCGCGGCGCCGTTTCCCGTCAACCGCGGTGTCGCCTA
TTACGCGGGGCGGTTGTTTCGCGGCACGGACGACGGCCAGGTGATCGCGC
TCGACGCCCGCAGTGGCGCGGAGTTGTGGGCGAACACGGTCGGCAACCCG
GGCGAGGGCGAGATTGTGACCGGCGCGCCGCTCGCGTGGAACGGCATCCT
CATCGTCGGCACCGCGGTGTCGGAGTTCGGCGTGCGCGGACGGGTTATTG
CGTACGACACGATGACCGGACGCGAACTGTGGCGCTTCCACACGGTGCCC
GCACCGGGCGAGCCGAATGCCGATACGTGGCGCAATACGATCTGGAACGA
CACCGGCGGGGGCGGCGGTGGCACGTGGTCGCATTTCGCGCTCGACCCGT
CGACAGCCGAAGTGTTCATCCCGGTCGCGAACCCGATCCCCGATTTCGTG
CCGGCCGAACGTCCCGGCGACAATCTGTATACGAACTCGGCCACTGCCGG
CGTCGGCCGCGCCGCGGAACAAGCCCCGGATTCGAACCTCCCGGAACACA
GTGCCGGCGGCGAATGGCCAAGCTACAACAAGACCCTGGACGGGCAACGC
TGGTCACCACTGACCCAGATCAACACGGCGAACGCGGGCGAACTCGGCGA
GGTGTGCCGTTACAAGGTCGCGGACAACGGCTCGTTCCAGGCCGGACCCA
TCGTCATCGAGAACGTCATGTACCTGACGACCGCTACCGATACGCTGGCG
ATGGATCCGACGAACTGCAAGGTGCTGTGGCGCCATCGTCACCGTCGCGA
TCGCGCGGCGCCGTTTCCCGTCAACCGCGGTGTCGCCTATTACGCGGGGC
GGTTGTTTCGCGGCACGGACGACGGCCAGGTGATCGCGCTCGACGCCCGC
AGTGGCGCGGAGTTGTGGGCGAACACGGTCGGCAACCCGGGCGAGGGCGA
GATTGTGACCGGCGCGCCGCTCGCGTGGAACGGCATCCTCATCGTCGGCA
CCGCGGTGTCGGAGTTCGGCGTGCGCGGACGGGTTATTGCGTACGACACG
ATGACCGGACGCGAACTGTGGCGCTTCCACACGGTGCCCGCACCGGGCGA
GCCGAATGCCGATACGTGGCGCAATACGATCTGGAACGACACCGGCGGGG
GCGGCGGTGGCACGTGGTCGCATTTCGCGCTCGACCCGTCGACAGCCGAA
GTGTTCATCCCGGTCGCGAACCCGATCCCCGATTTCGTGCCGGCCGAACG
TCCCGGCGACAATCTGTATACGAACTCG
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