mRNA_M-pyrifera_M_contig8897.20632.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig8897.20632.1
Unique NamemRNA_M-pyrifera_M_contig8897.20632.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig8897.20632.1 vs. uniprot
Match: D7FNB5_ECTSI (Heat shock protein 70-putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNB5_ECTSI)

HSP 1 Score: 763 bits (1969), Expect = 4.310e-274
Identity = 379/395 (95.95%), Postives = 388/395 (98.23%), Query Frame = 1 
Query:    1 VERKTLTAVLMQRCDEDEAEGGWRVAGFGDTAEEDYLTAKADESEEERGNLVLFKFFKMELYQGGREQRARMDVDEPTAKAVGGEILPMIFVVSKAIEYIKNQILDRVSMIAQEDDARLMWVVTVPAIWSNFGKRFMRAASHRAGLIADENDMQGLKLCLEPEAACLAVESSNQGVGSWHPGDKIMVLDCGGGTIDITSHLVESSDPLQLSELAEPCGGAWGSSIVDARFKSFLQEFFDRASGGLTRLEGTHELFAVTVEWERQKTRLARGASLRVSIGDIADLLELSPREIEELRKLHNDPKPREFHVGGTRRNLVLPPALVESFFRGAIGAIKDEVSTQLSTPDLQDLCYIYMVGGFCASPLLQDAIREEFDDPGRDLKVVVAPRPGLAVVSG 1185
            VERKTLTAVLMQRCDEDEAEGGWRVAGFGDTAEEDYLTAKADE++E+RG+LVLFKFFKMELYQGGREQRARMDVDEPTAKAVGGE+LPMIFVVSKAIEYIKNQILDRVSMIAQEDDARLMWVVTVPAIWSNFGKRFMRAASHRAGLIADENDMQGLKLCLEPEAACLAVESSNQGVGSWHPGDKIMVLDCGGGTIDITSHLVESSDPLQLSELAEPCGGAWGSSIVD RFK+FLQEFFD ASGG+TRLEGTHELFAVTVEWERQKTRLARGASLRVSIGDIADLLELSPREIEELRK HNDPKP+E HVGGTRRNLVLPPALVESFFRGAI AIKDEV TQLSTPDL DLCYIYMVGGFCASPLLQDAIREEFDDPGRDLKVVVAPRPGLAVV+G
Sbjct:   43 VERKTLTAVLMQRCDEDEAEGGWRVAGFGDTAEEDYLTAKADEADEDRGSLVLFKFFKMELYQGGREQRARMDVDEPTAKAVGGEVLPMIFVVSKAIEYIKNQILDRVSMIAQEDDARLMWVVTVPAIWSNFGKRFMRAASHRAGLIADENDMQGLKLCLEPEAACLAVESSNQGVGSWHPGDKIMVLDCGGGTIDITSHLVESSDPLQLSELAEPCGGAWGSSIVDTRFKAFLQEFFDNASGGMTRLEGTHELFAVTVEWERQKTRLARGASLRVSIGDIADLLELSPREIEELRKFHNDPKPKELHVGGTRRNLVLPPALVESFFRGAITAIKDEVGTQLSTPDLHDLCYIYMVGGFCASPLLQDAIREEFDDPGRDLKVVVAPRPGLAVVTG 437
[Close]
BLAST of mRNA_M-pyrifera_M_contig8897.20632.1 vs. uniprot
Match: D7G266_ECTSI (Heat shock protein 70 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G266_ECTSI)

HSP 1 Score: 309 bits (792), Expect = 1.860e-96
Identity = 182/408 (44.61%), Postives = 249/408 (61.03%), Query Frame = 1 
Query:    1 VERKTLTAVLMQRCDEDEAEGGWRVAGFGDTAEEDYLTAKADESEEERGNLVLFKFFKMELYQGGREQRARMDVDEPTAKAVGGEI-LPMIFVVSKAIEYIKNQILDRV----SMIAQEDDARLMWVVTVPAIWSNFGKRFMRAASHRAGLIADENDMQGLKLCLEPEAACLAVESSNQGVGSWHPGDKIMVLDCGGGTIDITSHLVESSDPLQLSELAEPCGGAWGSSIVDARFKSFLQEFFDRASGGLTRLEGTHELFAVTVEWERQKTRLARGASLRVSIGDIADLLELSPREIEELRKLHNDPKPREFHVG--------GTRRNLVLPPALVESFFRGAIGAIKDEVSTQLSTPDLQDLCYIYMVGGFCASPLLQDAIREEFDDPGRDLKVVVAPRPGLAVVSG 1185
            VERKT TA+L++R    +  GGW +  FGD AE++YL A+    E E  +L LFK+FKMEL++GGR+   R  VD+    +   +  LP+I+VVS A+EYIK+ +++R+    S   +  D R  WV+TVPAIWS+FG  FMR A+ RAGLI  ENDM+ L+LCLEPEAACL VE  ++ V  W  G K+MVLDCGGGTIDIT+H V S++PL L EL EP GG WGS+  DA+FK F++E          RL+ + E+F +  +WE +KT    G ++ +SI  + DL+ +S ++ E  RK  N+        G        G  R + L P LV +FF+ A+  I     T L+     ++  +YMVGGF ASPLLQ+ +      PG  L+V V  RPGLA+V G
Sbjct:   43 VERKTATAILLKRA--PKKSGGWCMVTFGDGAEQEYLEARTKGGEAE-SDLALFKYFKMELFKGGRKGTKRSSVDDAEGISEDQKTRLPLIYVVSLALEYIKDVVINRLNKADSHTLKAFDIR--WVLTVPAIWSSFGTTFMRTAALRAGLIQRENDMEHLRLCLEPEAACLTVEHHHRNVHKWENGMKVMVLDCGGGTIDITTHHVVSTNPLGLEELEEPAGGPWGSTTADAKFKLFIKELLRCTDEQWARLDKSTEMFELMADWEAKKTDHYPGKNVWISIAGMLDLVGMSVKDCEASRKQFNETSTVRLKTGSRAPAKAEGMGRRVSLTPELVSNFFKEAMVEIIKATQTVLARQP--EISVVYMVGGFSASPLLQEHVTAAVQQPG--LRVEVVERPGLAIVLG 441
[Close]
BLAST of mRNA_M-pyrifera_M_contig8897.20632.1 vs. uniprot
Match: A0A6H5K4X7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4X7_9PHAE)

HSP 1 Score: 239 bits (610), Expect = 1.990e-73
Identity = 127/240 (52.92%), Postives = 166/240 (69.17%), Query Frame = 1 
Query:    1 VERKTLTAVLMQRCDEDEAEGGWRVAGFGDTAEEDYLTAKADESEEERGNLVLFKFFKMELYQGGREQRARMDVDEPTAKAVGGEI-LPMIFVVSKAIEYIKNQILDRV----SMIAQEDDARLMWVVTVPAIWSNFGKRFMRAASHRAGLIADENDMQGLKLCLEPEAACLAVESSNQGVGSWHPGDKIMVLDCGGGTIDITSHLVESSDPLQLSELAEPCGGAWGSSIVDARFKSFLQ 705
            VERKT TAVL++R  E+   GGW +  FGD AE++YL A+  + E   GNL LFK+FKMEL++GGR    R  +D+    +   +  LP+++VVS A+EYIK+ I++R+    S   +  D R  WV+TVPAIWS+FGK FMR+A+ RAGLI DENDM+ L+LCLEPEAACL VE  +  +  W  G K+MVLDCGGGT+DIT+H V   DPL L EL EP GG WGS+  D +FK F++
Sbjct:   43 VERKTATAVLLRRSSENR--GGWCMVTFGDGAEQEYLDARNGDGEA-AGNLALFKYFKMELFKGGRNGTKRSSIDDAEGISEDEKTRLPLVYVVSLALEYIKDVIINRLNNADSHTLRASDIR--WVLTVPAIWSSFGKAFMRSAALRAGLIQDENDMEHLRLCLEPEAACLTVEHHHHNIRKWETGMKVMVLDCGGGTVDITTHHVVRMDPLGLEELEEPTGGPWGSTTADTKFKLFIK 277
[Close]
BLAST of mRNA_M-pyrifera_M_contig8897.20632.1 vs. uniprot
Match: A0A6H5K5B9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5B9_9PHAE)

HSP 1 Score: 225 bits (573), Expect = 2.930e-64
Identity = 150/407 (36.86%), Postives = 218/407 (53.56%), Query Frame = 1 
Query:   10 KTLTAVLMQRCDEDEAEGGWRVAGFGDTAEEDYLTAKADESEEERGNL-----------VLFKFFKMELYQGGREQRARMDVDEPTAKAVGGEILPMIFVVSKAIEYIKNQILDRVSMIAQEDD--ARLMWVVTVPAIWSNFGKRFMRAASHRAGLIADENDMQGLKLCLEPEAACLAVESSNQGVGSWHPGDKIMVLDCGGGTIDITSHLVESSDPLQLSELAEPCGGAWGSSIVDARFKSFLQEFFDRASGGLTRLEGTHELFAVTVEWERQKTRLARGASLRVSIGDIADLLELS--PREIEELRKLHNDPKPREFHVGGTRRNLVLPPALVESFFRGAIGAIKDEVSTQLSTPDLQDLCYIYMVGGFCASPLLQDAIREEFDDPGRDLKVVVAPRPGLAVVSG 1185
            KT TA L+      EA+    +  FG TA E ++  K  + +E+ G             +LF+FFK EL +          VD+P A A GGE LP++ V++  + +IK  +L  +S   + D   A + WVVT+PAI+ +F KRFMR ++HRAG+I+  +D   L+LCLEPEAACLAV      + +   G K+M++DCGGGT+DIT+H VES  PL+L ELA P GG WGS  VD+ F  +L++ F   +    R+  T   +++   WE  KT         VS+  +  ++EL     ++ EL   HN       H+      + LP  LV +FF   I  I + + +    P L+DL Y+++VGGF   PL+Q A R E D  G   +V+   R  LA+V G
Sbjct:   48 KTETAALL------EAKHPHGLLAFGKTARERFI--KDAQRDEDGGGCTGRRTTSGAPNMLFRFFKTELCKNS----GYTSVDQPVATAEGGETLPLMTVMTAVLRHIKEDVLAHLSQRLEVDPTVADVNWVVTIPAIYDDFAKRFMRVSAHRAGIISAVDDASQLQLCLEPEAACLAVSIKEAPLLA-KAGIKLMIVDCGGGTVDITTHSVESRRPLKLKELATPTGGEWGSVCVDSMFMVWLRKLFGATA--FARVRTTWAFYSLMDYWEEAKTAFQGKEDEDVSLNMVDVVMELGFDKGKLAELVAAHNHDLEPTHHLTRMNHYIDLPSGLVRTFFAPTIDKIGNCLRSLRGKPLLRDLKYVFLVGGFSCCPLVQQAARAELDRGG--CRVIDVDRRELAIVRG 437
[Close]
BLAST of mRNA_M-pyrifera_M_contig8897.20632.1 vs. uniprot
Match: D7G6V4_ECTSI (Heat shock protein 70 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6V4_ECTSI)

HSP 1 Score: 213 bits (541), Expect = 1.050e-59
Identity = 139/398 (34.92%), Postives = 218/398 (54.77%), Query Frame = 1 
Query:   10 KTLTAVLMQRCDEDEAEGGWRVAGFGDTAEEDYLTAKADESEEERGNLVLFKFFKMELYQGGREQRARMDVDEPTAKAVGGE-ILPMIFVVSKAIEYIKNQILDRVSMIAQE--DDARLMWVVTVPAIWSNFGKRFMRAASHRAGLIADENDMQGLKLCLEPEAACLAVESSNQGVGSWHPGDKIMVLDCGGGTIDITSHLVESSDPLQLSELAEPCGGAWGSSIVDARFKSFLQEFFDRASGGLTRLEGTHELFAVTVEWERQKTR---LARGASLRVSIGDIADLLELSPREIEELRKLHNDPKPREFHVGGTRRNLVLPPALVESFFRGAIGAIKDEVSTQLSTPDLQDLCYIYMVGGFCASPLLQDAIREEFDDPGRDLKVVVAPRPGLAVVSG 1185
            KT TA L+         G   +  FG  A EDY  +      +   +  LF++FK +L +   +Q    +V     ++VGG+  +P++ V++ ++ Y K  +L  +S       D   + WV+TVPAI+ +F KRFMR A++ AG+I D  +   L+LCLEPEAACLA  +++  + S   G  +MV+DCGGGT+DIT+H + S +PL L E+A P GG +GS+ VD  F+ +L+ F          +E T  L ++ + WER+K     L   A  R+++ ++A   +++ +++E LR+ +ND KP    VGG + N+ LP  LV SFF   +  I + +        L DL  +++VGGF   P+L++ IR   D P    +VV    P LA+V G
Sbjct:   48 KTETAALIG------GRGSGGLVSFGPAAIEDYAAS------DHVADQALFRWFKFDLCESRTDQT---EVGSVMTESVGGQHTVPLLGVMTASLRYFKEDVLAFLSRTGGRTVDVNSVNWVLTVPAIYDDFAKRFMRQAAYEAGMI-DRMNSTRLRLCLEPEAACLAAITTDNPLTSNAEGKNMMVIDCGGGTVDITAHKIISVEPLTLEEVAAPDGGLFGSTRVDNAFRVWLKGFLGEK---FQEIETTRTLLSIMMSWERKKATFQGLDSAAVWRLNLSELAGY-DVTNQDMENLRRSYNDGKPSSLFVGGEKFNVTLPTTLVTSFFTPTLQKIAECLRRIKRESQLHDLHRVFVVGGFSRCPMLREVIRNGLDLPAG--RVVDVHEPDLAIVKG 423
[Close]
BLAST of mRNA_M-pyrifera_M_contig8897.20632.1 vs. uniprot
Match: A0A6H5JSM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSM6_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 6.580e-56
Identity = 133/381 (34.91%), Postives = 210/381 (55.12%), Query Frame = 1 
Query:   61 GGWRVAGFGDTAEEDYLTAKADESEEERGNLVLFKFFKMELYQGGREQRARMDVDEPTAKAVGGEILPMIFVVSKAIEYIKNQILDRVSMIAQE--DDARLMWVVTVPAIWSNFGKRFMRAASHRAGLIADENDMQGLKLCLEPEAACLAVESSNQGVGSWHPGDKIMVLDCGGGTIDITSHLVESSDPLQLSELAEPCGGAWGSSIVDARFKSFLQEFF-DRASGGLTRLEGTHELFAVTVEWERQKTRLA---RGASLRVSIGDIADLLELSPREIEELRKLHNDPKPREFHVGGTRRNLVLPPALVESFFRGAIGAIKDEVSTQLSTPDLQDLCYIYMVGGFCASPLLQDAIREEFDDPGRDLKVVVAPRPGLAVVSG 1185
            G   +  FG  A ++Y  A +D  +++     LF++FK++L +   +      V   + +A     +P++ V++ ++ Y K  +L  +S       D  R+ WV+TVPAI+ +F KRFMR A+  AG+I D      L+LCLEPEAACLA    +  + S     K+MV+DCGGG +DIT+H + S +PL L E+A P GG +GS+ VD  FK +L+EF  D+  G    ++ T  L ++   WE +K         A LR++  ++A+  +++ +++E LR  +ND KP   HVGG + N+ LP  LV SFF   +  I + +        L DL  +++VGGF   P+L++ +R   D P    +VV+   P LA+V G
Sbjct:   63 GSGDLIAFGPAAIDEY--AASDNPDDQ----ALFRWFKLDLCESRPDHTDFASVMTESVEA--RHTVPLLGVMTASLRYFKEDVLGCLSRTGGRTVDVNRVNWVLTVPAIYDDFAKRFMRQAAFEAGMI-DRVHSTRLRLCLEPEAACLAAIVKDNPLTSDATDKKMMVIDCGGGIVDITAHKIISVEPLILDEVAAPDGGLFGSTRVDHAFKVWLKEFLGDKFQG----IQTTRTLVSIMSSWESKKATFQGTDSAAGLRLNFSELAEY-DVTIQDMENLRTSYNDGKPPSLHVGGGKFNVTLPTTLVTSFFEPTLDKIAECLRRIKRESSLHDLYRVFVVGGFSRCPMLREVVRTGLDLPAG--RVVLVHEPDLAIVKG 427
[Close]
BLAST of mRNA_M-pyrifera_M_contig8897.20632.1 vs. uniprot
Match: D7FKB7_ECTSI (Heat shock protein 70 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKB7_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 3.640e-53
Identity = 134/403 (33.25%), Postives = 210/403 (52.11%), Query Frame = 1 
Query:   10 KTLTAVLMQRCDEDEAEGGWRVAGFGDTA----EEDYLTAKADESEEERGNLVLFKFFKMELYQGGREQRARMDVDEPTAKAVGGEILPMIFVVSKAIEYIKNQILDRVSMIAQED-DAR-LMWVVTVPAIWSNFGKRFMRAASHRAGLIADENDMQGLKLCLEPEAACLAV--ESSNQGVGSWHPGDKIMVLDCGGGTIDITSHLVESSDPLQLSELAEPCGGAWGSSIVDARFKSFLQEFFDRASGGLTRLEGTHELFAVTVEWERQKTRLARGAS---LRVSIGDIADLLELSPREIEELRKLHNDPKPREFHVGGTRRNLVLPPALVESFFRGAIGAIKDEVSTQLSTPDLQDLCYIYMVGGFCASPLLQDAIREEFDDPGRDLKVVVAPRPGLAVVSG 1185
            KT TA L+ R       G   +  FG  A     E+  TA  D S+    +  LFK++K  L+   + +     V+  TA +  G+++P++ V++  + Y K   +  +S +      AR + WV+TVPA++ +F K FMR A+H AG+I D+     L+LCLEPEAACLAV    +N  +     G K+M++DCGGGT+DIT+H + + DPL + E+A P GGAWGS+ VD  FK +LQ F         ++  T  L ++   WER+K       S   +R+++  +     +   ++E+LR  +N  + R   V G    ++LP  LV SFF   + +I   +        L++L  +++VGGF   PLL   +R E  +     +VV    P +A+V G
Sbjct:  143 KTETAALINR------RGRGELVAFGQAALERHAENTATAGGDPSD---ASEALFKWYKTTLF---KPKPGENTVERVTATSTSGDVVPLLGVMTATLRYFKKDAVGFLSSLTGRTIRARDVNWVLTVPAVYDDFAKHFMRQAAHEAGMI-DKVGSTNLRLCLEPEAACLAVIPRGANNPLTCEAEGKKMMIVDCGGGTVDITTHNIVTIDPLNVVEVAAPTGGAWGSTQVDEAFKKWLQRFL---GDWYDKIAKTEILLSIMEFWERKKAAFDGHESAEPVRLNLSALGQRQMMDSHDLEDLRTRYNRGESRRNRVEGKGYMVILPTTLVTSFFTPTLDSIARCLRGIKGGSALRNLHRVFVVGGFSRCPLLMQVVRAELQNAS--CRVVEVSEPDIAIVRG 527
[Close]
BLAST of mRNA_M-pyrifera_M_contig8897.20632.1 vs. uniprot
Match: D7FSN9_ECTSI (Heat shock protein 70-putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSN9_ECTSI)

HSP 1 Score: 171 bits (432), Expect = 5.930e-44
Identity = 127/355 (35.77%), Postives = 185/355 (52.11%), Query Frame = 1 
Query:  157 LFKFFKMELYQGGREQRARMDVDEPTAKAVG--GEILPM-IFVVSKAIEYIKNQILDRVSMIAQEDDARLMWVVTVPAIWSNFGKRFMRAASHRAGLIADENDMQGLKLCLEPEAACLAVESSNQGVGSWHPGDKIMVLDCGGGTIDITSHLVESSDPLQLSELAEPCGGAWGSSIVDARFKSFLQEFF-----DRASGGLTRLEGTHELFAVTVEWERQKTRLAR-GASLRVSIGDIA-DLLELSPREIEELRKLHNDPKPREFHVGGTRRNLVLPPALVESFFRGAIGAIKDEVSTQLSTPDLQDLCYIYMVGGFCASPLLQDAIRE--EFDDPGRDLKVVVAPRPGLAVVSG 1185
            LFK FKM +Y          D+ +   K+     E++ M IFV+  A+EYIK+  L  +++        + WV+TVP   S   K FMR A+ +AG I   ND +GL LC+EP AACLA+ +  Q    W   DK +V+DCGGGT+DI++  V SS P  L +L E  GG WGS+ VD  F+++L++F      +     L     +   + +   WER K  L       R+ + +++ + LE++  E++E R+L N     EF  G    +LVL PAL+  FF+     I   VS QL  P LQ L  + MVGGF  S  +Q+A+R       P   ++V +   P LA+V G
Sbjct:   88 LFKRFKM-IYD---------DLVDAVTKSTSRKAEMMLMDIFVI--ALEYIKSVALMGMTLTHAVSAEDVTWVLTVPVCCSEPAKHFMREAATKAGFIKGGNDDEGLVLCMEPIAACLALGNRLQ----WRMRDKYLVIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGSTNVDRLFEAYLKDFVLSVAQEAGERSLESFFASSASYRINQAWERAKIGLRSVDHDCRIDLSELSREPLEVTTEEMDEGRRLKNRGG-TEFVGGHGTFDLVLRPALLRKFFKEQCKNISGAVSEQLERPHLQGLSAVVMVGGFSGSMHVQEAVRACVARKYPDGSVEVSIPKSPDLAIVEG 425
[Close]
BLAST of mRNA_M-pyrifera_M_contig8897.20632.1 vs. uniprot
Match: A0A6H5JT12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT12_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 2.330e-42
Identity = 117/318 (36.79%), Postives = 168/318 (52.83%), Query Frame = 1 
Query:  268 IFVVSKAIEYIKNQILDRVSMIAQEDDARLMWVVTVPAIWSNFGKRFMRAASHRAGLIADENDMQGLKLCLEPEAACLAVESSNQGVGSWHPGDKIMVLDCGGGTIDITSHLVESSDPLQLSELAEPCGGAWGSSIVDARFKSFLQEFFD-----RASGGLTRLEG---THELFAVTVEWERQKTRL-ARGASLRVSIGDIA-DLLELSPREIEELRKLHNDPKPREFHVGGTRRNLVLPPALVESFFRGAIGAIKDEVSTQLSTPDLQDLCYIYMVGGFCASPLLQDAIREEFDD--PGRDLKVVVAPRPGLAVVSG 1185
            IFV+  A+EYIK+  L R+++        + WV+TVP   S   K FMR A+ +AG I   +D + L LC+EP AACLA+    Q    W  GD+ +V+DCGGGT+DI++  V SS P  L +L E  GG WGS+ VD +F+++L+   D         G   LE    +   + +   WER K  L +     R+ + +++ + LE++  E++E R+L N     EF  G     LVL PAL+  FF      I   VS QL  P LQ L  + MVGGF  S  +Q+A+R       P   ++V +   P LA+V G
Sbjct:   98 IFVI--ALEYIKSVALRRMTLTHPVSADDVTWVLTVPVCCSEPAKHFMREAATKAGFIKGGSDDEDLVLCMEPIAACLALGDRLQ----WRMGDRYLVIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGSTNVDRQFEAYLKASGDFVLSVAQEAGARALESFFASSASYRINQAWERAKIGLRSLDHDCRIDLSELSREPLEVTKDEMDEGRRLKNIGG-TEFVGGHGTFELVLRPALLRKFFNNQCENISGAVSEQLERPHLQGLSAVVMVGGFSGSVHVQEAVRACVARRYPDGSVQVSIPKSPDLAIVEG 408
[Close]
BLAST of mRNA_M-pyrifera_M_contig8897.20632.1 vs. uniprot
Match: L1K181_GUITC (Heat shock protein 70-like protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K181_GUITC)

HSP 1 Score: 164 bits (414), Expect = 1.980e-41
Identity = 139/422 (32.94%), Postives = 209/422 (49.53%), Query Frame = 1 
Query:   10 KTLTAVLMQRCDEDEAEGGWRVAGFGDTAEEDYLTAKADESEEERGNLVLFKFFKMELYQ--GGREQRARMDVDEPTAKAVGGEILPMIFVVSKAIEYIKNQI---LDRVSMIAQEDDARLMWVVTVPAIWSNFGKRFMRAASHRAGLIADENDMQGLKLCLEPEAACLAVESSNQGVGSWHPGDKIMVLDCGGGTIDITSHLVESSDPLQLSELAEPCGGAWGSSIVDARFKSFLQEF-----FDRASGGLTRLEGTHELFAVTVEWERQK------TRLARGASLRVSIG--------------DIADLLELSPREIEELRKLHNDPKPREFHVGGTRRNLVLPPALVESFFRGAIGAIKDEVSTQLSTPDLQDLCYIYMVGGFCASPLLQDAIREEFDDPGRDLKVVVAPRPGLAVVSG 1185
            KTLT +L+ R +E           FG  A E+Y   + D S       + F+ FKM L +  GG           P   A+ G    +  V++ +++Y+K++    L+R S +  + D ++ WVVTVPAIWS+  K  MR A+  A LI +E   Q L+L LEPEAAC+  E  N  + +   GD+ MV+DCGGGTIDIT   V S +PL L ELA P GG WGS+ VD  F+ F+ E      F+ +   +  +E      AV   ++ +       + L  G    +S+G              ++A LL L+  ++E L +  N   P +         ++LP  L+ SFF   +  I   +S  +S+  +    YI++VGGF  S +LQ+ ++  F+    D ++VV  RP LAVV G
Sbjct:   68 KTLTNLLLTRDEE--------FIAFGSRAREEYY--EGDPS------ALFFENFKMLLNEVDGG---------SYPVVSALNGREASLRTVLAHSLKYVKDEAMATLNRCSAVEIKAD-QVKWVVTVPAIWSDCAKAMMRKAALDAALIKEETS-QLLQLALEPEAACMVCERENVCLRA---GDQFMVVDCGGGTIDITMSCVHSCNPLSLDELAAPSGGPWGSTYVDREFEKFILELLGEQAFNCSKESVVWIEVLRTWEAVKNSFDPKGLAKVAFSNLNGGVQGGMSMGTGEGASGRSGGRVINLAPLLVLNNLQLEPLVQAFNQKHPDKPLQIRMMTAVMLPNELIMSFFAPVLRNITRHISRLISSHRID---YIFVVGGFAESKVLQENLKFNFE--ACDRRIVVPTRPSLAVVRG 454
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8897.20632.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNB5_ECTSI4.310e-27495.95Heat shock protein 70-putative n=2 Tax=Ectocarpus ... [more]
D7G266_ECTSI1.860e-9644.61Heat shock protein 70 n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5K4X7_9PHAE1.990e-7352.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5B9_9PHAE2.930e-6436.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6V4_ECTSI1.050e-5934.92Heat shock protein 70 n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5JSM6_9PHAE6.580e-5634.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKB7_ECTSI3.640e-5333.25Heat shock protein 70 n=2 Tax=Ectocarpus TaxID=287... [more]
D7FSN9_ECTSI5.930e-4435.77Heat shock protein 70-putative n=1 Tax=Ectocarpus ... [more]
A0A6H5JT12_9PHAE2.330e-4236.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
L1K181_GUITC1.980e-4132.94Heat shock protein 70-like protein n=1 Tax=Guillar... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8897contigM-pyrifera_M_contig8897:301..11364 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score160.2
Seed ortholog evalue1.9e-36
Seed eggNOG ortholog55529.EKX54611
Preferred nameHSPA12A
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ATP binding
EggNOG OGsCOG0443@1,KOG0101@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons8
Model size1185
Cds size1155
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816799.3049219-CDS-M-pyrifera_M_contig8897:300..4701622816799.3049219-CDS-M-pyrifera_M_contig8897:300..470Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8897 301..470 -
1692278185.6135123-CDS-M-pyrifera_M_contig8897:300..4701692278185.6135123-CDS-M-pyrifera_M_contig8897:300..470Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8897 301..470 -
1622816799.31816-CDS-M-pyrifera_M_contig8897:1534..16311622816799.31816-CDS-M-pyrifera_M_contig8897:1534..1631Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8897 1535..1631 -
1692278185.627984-CDS-M-pyrifera_M_contig8897:1534..16311692278185.627984-CDS-M-pyrifera_M_contig8897:1534..1631Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8897 1535..1631 -
1622816799.3309243-CDS-M-pyrifera_M_contig8897:2655..27781622816799.3309243-CDS-M-pyrifera_M_contig8897:2655..2778Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8897 2656..2778 -
1692278185.6378212-CDS-M-pyrifera_M_contig8897:2655..27781692278185.6378212-CDS-M-pyrifera_M_contig8897:2655..2778Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8897 2656..2778 -
1622816799.343202-CDS-M-pyrifera_M_contig8897:3426..35161622816799.343202-CDS-M-pyrifera_M_contig8897:3426..3516Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8897 3427..3516 -
1692278185.6504023-CDS-M-pyrifera_M_contig8897:3426..35161692278185.6504023-CDS-M-pyrifera_M_contig8897:3426..3516Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8897 3427..3516 -
1622816799.3536804-CDS-M-pyrifera_M_contig8897:4661..48141622816799.3536804-CDS-M-pyrifera_M_contig8897:4661..4814Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8897 4662..4814 -
1692278185.6645215-CDS-M-pyrifera_M_contig8897:4661..48141692278185.6645215-CDS-M-pyrifera_M_contig8897:4661..4814Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8897 4662..4814 -
1622816799.3641067-CDS-M-pyrifera_M_contig8897:6095..63231622816799.3641067-CDS-M-pyrifera_M_contig8897:6095..6323Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8897 6096..6323 -
1692278185.6771636-CDS-M-pyrifera_M_contig8897:6095..63231692278185.6771636-CDS-M-pyrifera_M_contig8897:6095..6323Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8897 6096..6323 -
1622816799.374978-CDS-M-pyrifera_M_contig8897:7385..75121622816799.374978-CDS-M-pyrifera_M_contig8897:7385..7512Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8897 7386..7512 -
1692278185.6905925-CDS-M-pyrifera_M_contig8897:7385..75121692278185.6905925-CDS-M-pyrifera_M_contig8897:7385..7512Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8897 7386..7512 -
1622816799.3908634-CDS-M-pyrifera_M_contig8897:11167..113341622816799.3908634-CDS-M-pyrifera_M_contig8897:11167..11334Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8897 11168..11334 -
1692278185.7044995-CDS-M-pyrifera_M_contig8897:11167..113341692278185.7044995-CDS-M-pyrifera_M_contig8897:11167..11334Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8897 11168..11334 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816799.405267-UTR-M-pyrifera_M_contig8897:11334..113641622816799.405267-UTR-M-pyrifera_M_contig8897:11334..11364Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8897 11335..11364 -
1692278185.7191048-UTR-M-pyrifera_M_contig8897:11334..113641692278185.7191048-UTR-M-pyrifera_M_contig8897:11334..11364Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8897 11335..11364 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8897.20632.1prot_M-pyrifera_M_contig8897.20632.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig8897 301..11334 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig8897.20632.1

>prot_M-pyrifera_M_contig8897.20632.1 ID=prot_M-pyrifera_M_contig8897.20632.1|Name=mRNA_M-pyrifera_M_contig8897.20632.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=385bp
MQRCDEDEAEGGWRVAGFGDTAEEDYLTAKADESEEERGNLVLFKFFKME
LYQGGREQRARMDVDEPTAKAVGGEILPMIFVVSKAIEYIKNQILDRVSM
IAQEDDARLMWVVTVPAIWSNFGKRFMRAASHRAGLIADENDMQGLKLCL
EPEAACLAVESSNQGVGSWHPGDKIMVLDCGGGTIDITSHLVESSDPLQL
SELAEPCGGAWGSSIVDARFKSFLQEFFDRASGGLTRLEGTHELFAVTVE
WERQKTRLARGASLRVSIGDIADLLELSPREIEELRKLHNDPKPREFHVG
GTRRNLVLPPALVESFFRGAIGAIKDEVSTQLSTPDLQDLCYIYMVGGFC
ASPLLQDAIREEFDDPGRDLKVVVAPRPGLAVVSG
back to top

mRNA from alignment at M-pyrifera_M_contig8897:301..11364-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig8897.20632.1 ID=mRNA_M-pyrifera_M_contig8897.20632.1|Name=mRNA_M-pyrifera_M_contig8897.20632.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=11064bp|location=Sequence derived from alignment at M-pyrifera_M_contig8897:301..11364- (Macrocystis pyrifera P11B4 male)
GTGGAACGCAAAACTTTGACAGCGGTGTTGATGCAGCGATGCGACGAGGA
TGAGGCGGAAGGCGGTTGGCGTGTTGCGGGGTTCGGGGACACGGCGGAAG
AGGACTATCTGACGGCTAAGGCCGACGAGTCAGAGGAGGAGCGAGGAAAC
CTTGTGCTCTTCAAGTTTTTCAAGATGGAGCTGTATCAGGGGGGAAGGTA
GGTTTGGTTAATTGTTTTTGATTGGCTGTTGTTTGGTTACTAGCTGGTTC
GTTGTTGGCTTCATTGGCTATATCGGCATGGAAGGTATTTTAGTTGTGAC
TTTTGATTGGCTGTTTTTTGGTTGGCTGCTGATTGGCTGTATGAGAGCGG
AAGGTCAGTTTGATTATTTTTGGTTGGCTGCTTTTAGTTTTGCTAATGCT
TGATGGACTGTTGTTTTGTTAGCTAATGTTTGATGGGGTGTTGTTTGGTC
GGTTGCTCGTTGTGGGCTGGGGCTCTACTGCGGTCGACGGGCCTCTAAAA
TATGTTGCATCATCATAAGATGGGGTAGACCTCGCGCATGTATATTAATA
TAGCGCCATGCTGGTTATATTGGGACTACTATAATTCGATACAGCTTCCG
CAAGCATGCGGCACTGGCGTGATGAGTCCGGAGCCTACTGTTCGCTGATG
AGTTGTACGACCTCATTGTTCGTACAGCAGTGGCTCTATGGCCTATTATT
AATAGTTGGGCATGGTGGCGTCGGCGGCCGTAGTTGAGCATATACCAGGT
TATTATCGGGCCACAGCAGCGTCTACTGCTGCTGCTACTACTACTACTGC
TGCTATTACTACTACTGCTACTGCTACTACTACAACAACTACTACTACGA
CTACGACTACGACTGCTACTACCACTTCTACTTCTACTGCTACTACTACC
GCTACTACTACTACTTCTGCTACTACTACTACTGCTGCTGCTACTACTAC
TGCTGCTGCTACTATTGCTGCTGCTACTACTACCGCTACTACGTACTACT
GCTGCTGCCACTATTGCTGCTACTACTACTACTACCACTACCAACAGTAC
GCGGCAGCAGTATGGAACACACACGTAGAAACTCTTATTATGGGCCAAGC
TCAATTTTTAATGCGAGGCAGAGTGTATCCGTATCTGTATCTGTATCCTA
TTAATAGACTGGTTTGTAGTTTCATTATCACCAGGTATGTTTCTTTTCTT
CCGCGCTAAGGTCGAGCCAAAAGTTGTTGACTCCCAGTTTCGAAATGAAG
TACGTGCTGTCGCCTACTGTATGACTGCTGCTACTGAAGTGTTTGTGGAG
GCGTAGAGAGCTGTATCTTCGTATTTATGTTATTTAATGTACAGTAGACT
AATGAGACAATAGTCGGTGCTGCTATGTAGCTTTGAGGGGAGAGGAAGGG
ATGAGGGGCGGACGGGGGGAGGGGTAGGGCGGGGGTGTACTCATGCCATG
CGTGGCCTTGATTGGGGAGGGGGGGTAGGGGGGGGGGGGGGAGGGCAGGG
GGTATGCAGTGGTGTTTTGTTTTTGTGCGTGACAGTCCTGGGTACAAAGC
AAATGTCAGTAGTCGTCTAGAAAGCTTAACGAAGAGTACTCCAAGTTTCG
TGCAAGCTCCGTTATTCCTGCCCGTGCGTTTTCCGACCCTGCCGTACGGT
AGTACTTGTACAGGTAGTACAACAGGCGTAGTGGAAACAGTACAACACTA
GGGTACGGTAGTGTGCACTATATTAATAGTAAGTTGAGGTGGCCCATCAG
GTATACCAGGTACAAGTGGAGATAGTACGGCGCTAGGGTACGGTAGAGTG
TGCACTAAAGTAGGTTGATGTGGCTTATCAGGTATATGGTACAAGCATAC
GTTACGGTAAACAAGTACAGTATACATACATTTTACAGACAGTATTAATA
TTAATAGTACGATGTAGGAACAGTGCGGTACAGGCACTGTAGGGTACGGT
ACGGTACAGGTAAAATACGGTACAGGTGCAGCTCACGCATACAGTCCAGT
ACGTATGCCAGGAATATTTTGGAGATATGGTAGTACAGCAGTCTATCACC
TACAGAGTCGTATTCAAGTAGTAGTAGCAGTAGTAGTAGTAGTATTGTAG
TAGTAGTAGTAGTAGTAGTAGTAGTAGTGGTATTTGTTGTATTAATAGTA
GTAGTACTACTACAACTACAGTAGGGGCAATGATAGCAGGTAGCAGTGGT
TAGCTGGAGTAGTAGTTGTAGTGTTGGCAATAATGTGTTTCAGGTACCAT
GTATAGGAGCAAGACGAAGTAGTAGGGGATGGAGTGACGCCTGCCATGAT
GTCCGAAGCCTCAATGAGGGAAACATCATGTCAGCCTGTCGTAGGCGTGG
AGTGTTTCATCTCCGGCTGCTCCTTAACTCCGCTGCTCTTGCCTCTCGTG
CTCGACGTGTTTCGCAGCTGCGGGGTGAATCGTTGCCGCAATCCATCTGC
TTTTCCTTGTTATTCTGACCCCTCCCAGAACGAGAGGCCGTCGTCACTTC
ATCCGTCGATCGACGGCAGGTGTGGCACCAAGCACGACTTCTGTACTGTA
CAGTAGAGCAACACGACGGCCGGACTGCTACGTACTTGGGAATTGATTGG
TATCCGTATCTTGCCTAGGCCGAGACAGCCGGCGCGATGACCGTATTCGT
ATGTTCATACCCCCCGCGGGTAAATACGATTCGAACCCTGACCCGTACCG
TATGGGCTCCACCCTACAATGCTGCTCTCTCTGTTATGTGTCGTGCTGTA
CTGTGTGGTATGCTGCACTTGTAGTCTGTCCTGTCGTTGGGTACCACAGC
CTTCTACCGCGCGGTATTCTGCTGTTCTGTACGGTGGTCTGTTGTCAGTT
TGCTGCGGAGCAGACTTAGCCGAGTGGGAGTGAGCACACAGCGCGTCGGG
TATGAGACATGTAAGACCCTGCCGATGGTTCTGAGTCTACTGTAGTTCGC
TCCTCCCTCTCTCCCTGTGTGCGTGGGTGGGTGCGTCTCTGCGTGCGCGC
GTGCGTGCGTGCGTGCGTGTATATCGCTTCCTTTTCTGCGGGGGGATTAT
TATTGTTGCGGGTTACGTGTGACGAGGCGCACAGAGCGTACGGGTGGGCA
CACGTAAGACCTTACCGATGTTTCCGAATCTCAAGATTGCTTCCCTGCCT
ATGCATCTGCCTGGGTGCGTGCCTGCGAGCGTGACGTGTGCATCGTTTCC
TGTTTTGCGGGGGGACTGCTTTTGTTCCGTATTTATTTTGCGCGCCGAAC
GGGCGAATGAGAGCGCACAAAGCGTACGGGGACATGTCATGATCTTGCAG
ATCGTTCTTAACCTTTTAGTGCCGCTTCCCTATTTGCCCGCGTGCGTGCC
TCATGTATCTCTTCATGTTCTGTTATGCGGGGGGTGTTTTTTTTGCTGTC
CTATTTTGTTCTCGCTTGTACGTGTACTGTACATGTAGGACATTCCCGAT
GGTTCCGAATCTGAACTCGCGCCTCTTTCGGTTCATGCGTGCGGATGTAT
CGCTACGTGTTTCGCGGCAGAACGGTTTTTGGTGCTGATTCATTTTGTTC
CGTTGCTCGTGTGTATATAGGGGTACTTTGCAGCATGTGCCCGGTGGTTC
GGAGTCTGAAATGAAGCCTCCCTCCATGCCCACGTGCAGATATATCGCTA
CGTGTTTTGCGAGGGAATTGTACTTTGGTCTGTTTTAGTTTGTGTCTTGC
TTGCACGGGAATGTGCGTGTAAGACATTCCGATGATTCCGAATCTAAAAA
TCGCGCCTCCCTCCATGCCTGCGTGCGGGTACATCGCTACCTGTTTTGCG
GGGGAACTGTTTTTGTTTTGTACGCATTTGTTTTGTTTTTCTTGCCTTGC
AGGGAACAACGGGCGCGTATGGACGTTGACGAGCCCACCGCGAAGGCTGT
TGGCGGGGAGATTCTGCCGATGATATTCGTCGTCAGCAAGGCCATCGAGT
ACATAAAGAACCAGATTCTTGACAGGGTGGTGAGTGAGTGTTGGTGATTT
TCGACGTGCCTCGGCTTCGACCAAGATGGTTCGACAGTCCGCGCCAAATC
CTCGCGTCATCCTAGAACATTCCGCGTTTTTTTGCAGGCGGTCGGTTTCG
GGGTTAGGGTTTAAATTTCATAACGACATTTGGACCGTTCTTTTTGTTCG
CGCGTCGGGTGGATCATCGATTTCCAGTTGATGATCTGGGTGTTCCAGAG
CAGATAGATCTATTCCTGATGTGTATGATGTGTATGATGTGTATGATGTG
TATGATGTGTATGATGTGTATGATGTGTATGATCTGTATGATCTGTATGA
TCTGTATGATGTGAGCCGTATAATCTGCATGACCAGTATGGCACGTGTGT
CCTGGTTTGGATGTATCTATGTATACTATGCACAGATACATCCTGCACAG
CATCATCTGACGACGGCTTAGGGTTAGCATTAAGCCATTCAGGACTGCAG
TCCCGGTATGGGGAGAAACTATTGGGAATTAGAGTGGTTTGTCCCGAAAA
CGGGACAGCAATTCTAACAGCGGTAAGAGTATCTATTATAATCGTGCGTG
ATCTGTCGGACATGTACCGACCGTTATCTCGAAGCTGGGTCCCTTGCGGA
AATGACGCCTCCGGTGTGTGGTGCGTGTCCGTTGGAAGCCATAGCTACGT
GTCCCCCCCACCCCTTCGGAAATTAAGGTGGCGTGTTTTTTTTGCCGGAG
CAATCGATGACTTCACAGTTGTATGTAGCAAACCCTCCCGCCTCGGTGAA
AACCCGACGTGCTCCGTCCCGGCACTGTAGGGATGCCAGGGTGTATGGTC
ATACGACTAATGCCATACATGACATGAGTACTTCCCGATCACCAAAATAA
CGCCTGCTGACAAGAACGCCCCCGACCCCGTCTTGCAAGGAATGGGGGGT
CAATGGTCGTATGACTGAGGGCAAGGAACAAATGGGGACGCCCCCCCCGT
CCCTTGTTCAAAATAACAAAATAACGCCTGATACAAGAACGCCCTTCCCG
ACGTGTTGGTGGTTTTTTGTTATTGCTGGTGTCCGTTCCAGTCGATGATC
GCCCAGGAGGATGACGCTAGGCTGATGTGGGTGGTGACGGTTCCCGCCAT
CTGGTCGAACTTCGGGAAGCGATTCATGAGGGCGGCTTCACACCGCGCGG
GCCTGATCGCCGATGAGAATGATATGCAGGGTCTGAAGCTCTGTTTGGAG
CCCGAGGCGGCATGCTTGGCAGTAGAGTCTTCCAACCAGGGGGTGGGCTC
GTGGCACCCCGGGGATAAGGTGAGCCGCGGTGATGGTGGGGGTTGGGGGG
GGGGGTGTTATATTTTTTTGCTTGCCGTAGTCATTTAGCCGTTGACCACG
CATCCCTTTCGAGACGGAACACCGTTCCTACTCCTAATGGAGACACCTCC
AACATTTGGGCGCTCACTACGTTGTTTCCTTATATTACATACCAGGTAAC
AACTTTTTGCTGATCTTATCCCCTTACTGTTTGGCGGGGGGTGGGGGGGT
GGGGGGGTGGGTGGGCGGGGGAGGAGTGCACTCGTGTCATGCATAGGCGT
AGTGGTATAACCATAGACTGTCGCATCCCGTGGTAGTGGTGGTGGTGGTT
TTGGTGGTAGTGGAGGCGGTGGGTGTGGCGACGGTGCTGGTTGTGGTGTG
GGGTGTTGATGGGGATGGGTATCGGGAGTGGTGCAACGTTAATAGTGGCG
GTAGTGGTGGTGGTGGTGATGGAGGTGATGGTAGCGTTGGCGGTGGTAGT
GGTGGTGGTGTACGGTGTTGGTGTTATTGGTGGTATTGTGTTGGGGGCGG
CGGGGATGAGATTAGGATGGGAGTGGAGGGGATGTGGAGGTGTGGGGGGC
GGGAGGGGGGCGGCAGTTGCGATGATGTGGGGGTGGGGGTGATAGGGGTT
TGGTGTGGGAGAGCGTGGTGGCGGTGAGGGCAGGGGGGATTTTTGCTGGT
GCTGGAGGGTGGTGGAGGTAGAGGTGGGATGTTGGGCGTGGTGCTGGTAC
TGGTGCTAGCTAGCTAGTAGTAGTGGTGGTGGTACTGATGCTTGTGGAGA
CAGTGGTGATGGTGCTGCTGGTGGCGGAAGCGGCGGAGGTGCTAGCGACA
GAGTTGGGGGGGGGGGCGATAGTTGACGCGGTGGTCGTGGATGCAGTAGC
AGAGACAGTAGTGGGGGCAGGTGGATGCAGTAGCGGCGACATTAGTGGAG
TCAATTGGAGGCAGAGCTTTGACGCGGTGATGGAGATAGTAGTGGGGGCA
GCGGGGGCACAAGGGGCGGAGGTTGGTAGCGGAGCTTGTGAAGGCGGAGG
AGGCGAGCTATTTCTCGTGGTGTCGTTAGGCGGTCGGGTTGATGCCATTC
ATTTTGCGCCAGGAAGTTAGTCCTGCTGTGCTGCTTGCCGTTTTCAAATG
TATTTATGATTATGGTGCTGATTTCTTGAATTGTGACTCGTACTTTTAGG
GCATGATGCTGCGTTCTTGAATTGTACGTTAGATCATGGTGCTGGAATGC
GTTTAATGTGAAAACTGCTGTGCTGGTTGCTGTCTTGAATTGTATTATAG
ATCATGGTGCTGGATTGCGGTGGCGGAACAATTGACATCACGTCTCACCT
GGTGGAGAGCTCGGATCCTCTGCAGCTCAGCGAGCTGGCGGAGCCGTGCG
GTGGCGCTTGGGGCAGCTCGATCGTTGATGCGAGGTTCAAATCGTTCCTT
CAGGTACGACACCATCGCACGACATGCTATACCATACCATACCATACCCT
ACCCTGTATTGTATTGTACTAGAAGTCTAGACTGCTGTAGTACCGGCAGC
GTACCGTACCATGCCATATCACCGCATTCCTAATTCTAACTGCCTATAGG
TTGAACCTCGTAACCACTAAAAAGCCGATTTCGCGAGTTTGAGCCCCGGC
GCGGGACGTCTTTTTTTTTCTCTGCTTGAATTTATTGCAGAAAGCGCCTA
CTGATATTAATAGATAGATAGCGTGTGCACACACAATTCGACGCGAAAAT
GCGGAAGTAAATCTCGCGATCAAAATCAAGACATGTTTGCACCTTGGAGA
GGGGGAGGAGTAGGAGTGCCCGTCATTTGACCCCTGATCTCAGCCACCAA
AGGGAAGGGGGGTCTTGGAGAGCTATAGGGCAAAGAGGTTATTAATACAT
GGGATGGAAAATATACAATAAGTACATACCAGGGTATGTGTATAAGAATA
CCATACCATACTCTACCATACCGTACCGTAACATATAACGTATAATGACT
CGCACCGCCTAGGGAATTGCTCGGAGTAGTGACGCAGTGAGATTTTCGTG
TGGACTATCACAATTTCAATGATTTTATCGTTGCTGAGAGAAGTCGTAAA
CGCCGTGTTTGCTGTGTGTATGTGTGTGTGTTTTTTCTTCGTTGTATTAA
CTGATTACAAATACAGATAGTTCTTCCGTCAGTTTGACCGATTGAGTGGT
TGGTCCTCAACTTCAGCGAGCTAATAGATACGTCAGGCACGCTTCTCTTA
TACCAAGTTTTCCGTTGACAATACTCGTACTCGTAAGGCATTTGTAAAGT
CGACTTTCGTTGTATTATGTACTCGTCCAATCTACCCTGGTACTATCTCG
CAGGAATTTTTCGACCGTGTATGTGTGTGTTTTTTTTCGTCGTTGTATTA
ACCGATTACAGATAGTTCTTCCGTCAGTTTGACCGATTGAGTGGTTGGTC
CTCAACTTTAGCGAGCTAATAGATACGTCAGGCACGCTTCTCCTGTACCA
AGTTTTCCGTTGACAATACTCGTGCTCGTAAGGCGTTTGTAAGTTCGACT
TTCGATGTATTATGTACTCGTCCTTTCTACCCTGGTTCTATCTCGCAGGA
ATTTTTCGACCGTGCGTCGGGGGGCCTGACGCGGTTGGAAGGGACGCACG
AGCTGTTCGCCGTAACGGTCGAGTGGGAGAGGCAAAAGGTGATCCAACGA
CCCAACCGTACTCTTGGTAGGCATATATCCGTTGAAAGTATTACGTTGTA
TGAAACGTGTCCTTAGACTTGGCACGAGCTGTCCGCTGCAGCAGTCAAAT
AGGAGCAGCGAAAGGTAGCCGAACGATCCAACGGGCCGCTCGGTAAAAGA
AGCGTTAGTTATTCTATGCACAAGCTGTTGGCCGCAACGGTCGAGTGGGG
GCGGCCAAAGGTGACCGAACGATCCACCAATGCTTGGTTTATAGACCCGT
TGAGAGGCAAACGTTACATGAAACGTTACACTACGAGTAGGCACGATCTG
TTGTCCGCCACAGTCGAGTTGGGCGGGGGGAGCGGCAACAATGTTTATTT
TTTTATTTAACAATAACACTCTGCGGCTCCTTGAACTCTTTGCTGCTGCT
GCTGCTGCTGCTGCTGCTGTGTTGGTTGTTGTTGTTTGTTTCGGTGGTGG
CGTTGTTTTGTGGGTGTGTTGCTCTTTTTTTTTTTAAGCGGTGTCGTTCA
TTTGTTGGATGCGTTATTGCCGTTGATGCTTGATTGGTGTGTCGTCTTGC
GTGTTAGAGTTAATGCTGATACATGCACATGCACGGTGCTCGTACGTGAT
TTATGTTGTTAATGTGGTCTATTTCGTTTTTGTCAGACGCGCTTGGCGAG
GGGGGCATCACTGCGTGTCAGCATCGGAGACATCGCAGACCTGCTGGAGC
TGTCGCCGCGCGAGATCGAGGAGCTACGGAAACTGCACAACGACCCCAAG
CCGAGAGAGGTGAATGGTCGAATGCTTAAGTGATCGGTTGTTGCATATGT
TGGATAACGAGTGGCCGTGCTGGCATGCTGGGTGATGGTGATGATTTGTG
ATGACTGGTGATGATACAGCCGATTGTCCCAAGTGATAATTGATTTTCCG
ATGAGAACCACAGTATAATCAAATTGTTTCGTATGTTTAGCTGTTTGAGA
GTTGTGCATCCCTCACAGTTAAAAATTGTCCTGTGATGTAGTTGTACGTA
ATCATATTGGTGGTAGGTATGGATTCCACTACAAAAAATCAAAATCAACG
TTGACAGGCTGGTAAAACAAAGAAGAGAAGAAAGTTGACATTTAGGCGGG
AGGCGCCCATAGTAACGATTTTGTTGGATTTTCGATTTCTGGAGGCTGCC
GATGCCGTTTTGGTGATTCATTGGTGCGATGGACAGTTGTCACGACTGAC
TAAATTTTTTCAACGAAAGTTTTGCCTGCGAAAATACGTATCTTACGAAA
AACAAACCAAAACTCCCAGAAGGTTATATTGTAGTTGTCGTCGGCAAGAC
TATCCTCCAATTGGAAAATCGGTCGTTCTGTAGTATTGCATGCTGATTGG
TGTTCAAGGATGATGATTGGTATTGATTCACGATCGGGTCTGGTTATGGA
CTGTGAATGGTGAAGCATAACGTAACTTAACCTCTAACCAAACTTAACCC
CTAAGAACCTAGTTGTTTCGCAATAAACCACTACATCAGTACTGCAGAAG
GCCGTGTAATTGCTCATCAGTTTTTCGCTGTCGTTTGTGTTTTGTCAAAA
GTCACTTTTTTGGGCGAGGAGTAGCGGTCGGTCCTTCCGGACAGCCTCGG
AAAAATTAGTAGCACCCTTACCGTACCCTAACCCTAACCTATTAACCCAT
CCTAACTCCTGTCCTAACTCCTGTCCTTGCCGAACTTGATTGTGATTGCT
GCGTGTGGATTTTGATTGCGTGCGGGTTTTCGTTTGGAAAACTTGGTCCC
CGGGCTGGTTAATCTGGTGCGGCGGTTGTGCAGTTTCACGTGGGAGGCAC
TCGGCGGAACCTCGTACTGCCGCCCGCGCTGGTGGAGAGCTTCTTCCGCG
GCGCGATCGGCGCCATCAAAGACGAGGTATGTCATACCTGATACCACTTA
TTCTCAAGATTTTGTATTGTATGACCCAGTTAGTATGTTTTGCATTGTTC
GTTCCGCCGCGCCGTCAGTGCCATCAAAGAAGAGGTATTAATATTCACAT
ATATAGGGTTTGATTTATGAGGTGTATGAATTTGTATGATTTGTATGAAT
GTAGGCATCCAAGACCGCCTGCGCTGGTGGAGAGATTCTTCCGCGGCGCC
ATCAGCGCCATCAAAGACGAGATGTGTATTTGCACTCGTGTATTTATGTT
TATACTAGGTACAGCAGGGGGCCGGCCAACAAGAATCACGTCATCTGAGC
GAAGGCCTTCTAACCGTGTTGTGACTGCACCTTTGAACAACCTTGGAGCA
TACATGGGTTGATATGCAGGATTTAGTGCAGTACTCGCCACTGAGCCCGA
CTTCTTGATTTAAATTTCTTCAGGCTCCCTAGGAGGTGATCCTCATGTTC
TTATTATTAGTAGGTTATTTATTATTCGTGAGCCTACACTGTACCTGTAG
AGTTTTTTCCAAATATTTTGTATGTGTGGTGGTTGTTGTGTACGCGCTTA
GGTTTGCATGATTTGTATGTATGTTTCTTGTTGTCTGACCAACGTCGCTA
TCAGTGTCGCCAAAGACTAGGTGCTAACATTTGTCGTACCCGTATTTTGT
GGTGGTATGTGCGAATTCGTTTTGCTTGAGTTGCATTTTGATAATTTGTT
TGGGTTGCATTTTTTTTTTTTTTTTTGCAATAAAAAACGCCGTTCTGTCA
CCGTGCGTCCTCTGAACGACGAAGCTTACATGTACGGAGATTTTGTTACA
GTAGTTAGTTATTTGCCTTTTTGTTAGAATTCTGCCGTTTCGCTGTTGCG
TTTGGTTGTTCCGTTTCGTTGTCGTGATATTGGGTACCGTTTTGGTCATG
TTCCGTTTCGTTTTCGTGGTGTTAGGTGGGTGTAATTTTCTTTGCTCCGT
TTTGTGGTGATGTTCCCTTTCGTTTTCGTGATGTCCCGTTTGTTTCGTTT
CGGTTCTCACTTGTACACATGCTCATTTGTACGCATGCAGGTAGCAACGC
AGCTGTCCACGCCAGACCTCCAAGACCTGTGCTACATCTACATGGTCGGA
GGGTTCTGCGCGAGTCCCCTGTTGCAAGACGCGATCCGCGAGGAGTTCGA
TGATCCTGGGAGGGACTTGAAGGTCGTCGTCGCGCCGAGGCCGGGACTGG
CGGTGGTGAGTGGT
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig8897:301..11364-

>mRNA_M-pyrifera_M_contig8897.20632.1 ID=mRNA_M-pyrifera_M_contig8897.20632.1|Name=mRNA_M-pyrifera_M_contig8897.20632.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2310bp|location=Sequence derived from alignment at M-pyrifera_M_contig8897:301..11364- (Macrocystis pyrifera P11B4 male)
ATGCAGCGATGCGACGAGGATGAGGCGGAAGGCGGTTGGCGTGTTGCGGG
GTTCGGGGACACGGCGGAAGAGGACTATCTGACGGCTAAGGCCGACGAGT
CAGAGGAGGAGCGAGGAAACCTTGTGCTCTTCAAGTTTTTCAAGATGGAG
CTGTATCAGGGGGGAAGATGCAGCGATGCGACGAGGATGAGGCGGAAGGC
GGTTGGCGTGTTGCGGGGTTCGGGGACACGGCGGAAGAGGACTATCTGAC
GGCTAAGGCCGACGAGTCAGAGGAGGAGCGAGGAAACCTTGTGCTCTTCA
AGTTTTTCAAGATGGAGCTGTATCAGGGGGGAAGGGAACAACGGGCGCGT
ATGGACGTTGACGAGCCCACCGCGAAGGCTGTTGGCGGGGAGATTCTGCC
GATGATATTCGTCGTCAGCAAGGCCATCGAGTACATAAAGAACCAGATTC
TTGACAGGGTGGGAACAACGGGCGCGTATGGACGTTGACGAGCCCACCGC
GAAGGCTGTTGGCGGGGAGATTCTGCCGATGATATTCGTCGTCAGCAAGG
CCATCGAGTACATAAAGAACCAGATTCTTGACAGGGTGTCGATGATCGCC
CAGGAGGATGACGCTAGGCTGATGTGGGTGGTGACGGTTCCCGCCATCTG
GTCGAACTTCGGGAAGCGATTCATGAGGGCGGCTTCACACCGCGCGGGCC
TGATCGCCGATGAGAATGATATGCAGGGTCTGAAGCTCTGTTTGGAGCCC
GAGGCGGCATGCTTGGCAGTAGAGTCTTCCAACCAGGGGGTGGGCTCGTG
GCACCCCGGGGATAAGTCGATGATCGCCCAGGAGGATGACGCTAGGCTGA
TGTGGGTGGTGACGGTTCCCGCCATCTGGTCGAACTTCGGGAAGCGATTC
ATGAGGGCGGCTTCACACCGCGCGGGCCTGATCGCCGATGAGAATGATAT
GCAGGGTCTGAAGCTCTGTTTGGAGCCCGAGGCGGCATGCTTGGCAGTAG
AGTCTTCCAACCAGGGGGTGGGCTCGTGGCACCCCGGGGATAAGATCATG
GTGCTGGATTGCGGTGGCGGAACAATTGACATCACGTCTCACCTGGTGGA
GAGCTCGGATCCTCTGCAGCTCAGCGAGCTGGCGGAGCCGTGCGGTGGCG
CTTGGGGCAGCTCGATCGTTGATGCGAGGTTCAAATCGTTCCTTCAGATC
ATGGTGCTGGATTGCGGTGGCGGAACAATTGACATCACGTCTCACCTGGT
GGAGAGCTCGGATCCTCTGCAGCTCAGCGAGCTGGCGGAGCCGTGCGGTG
GCGCTTGGGGCAGCTCGATCGTTGATGCGAGGTTCAAATCGTTCCTTCAG
GAATTTTTCGACCGTGCGTCGGGGGGCCTGACGCGGTTGGAAGGGACGCA
CGAGCTGTTCGCCGTAACGGTCGAGTGGGAGAGGCAAAAGGAATTTTTCG
ACCGTGCGTCGGGGGGCCTGACGCGGTTGGAAGGGACGCACGAGCTGTTC
GCCGTAACGGTCGAGTGGGAGAGGCAAAAGACGCGCTTGGCGAGGGGGGC
ATCACTGCGTGTCAGCATCGGAGACATCGCAGACCTGCTGGAGCTGTCGC
CGCGCGAGATCGAGGAGCTACGGAAACTGCACAACGACCCCAAGCCGAGA
GAGACGCGCTTGGCGAGGGGGGCATCACTGCGTGTCAGCATCGGAGACAT
CGCAGACCTGCTGGAGCTGTCGCCGCGCGAGATCGAGGAGCTACGGAAAC
TGCACAACGACCCCAAGCCGAGAGAGTTTCACGTGGGAGGCACTCGGCGG
AACCTCGTACTGCCGCCCGCGCTGGTGGAGAGCTTCTTCCGCGGCGCGAT
CGGCGCCATCAAAGACGAGGTATTTTCACGTGGGAGGCACTCGGCGGAAC
CTCGTACTGCCGCCCGCGCTGGTGGAGAGCTTCTTCCGCGGCGCGATCGG
CGCCATCAAAGACGAGGTATCAACGCAGCTGTCCACGCCAGACCTCCAAG
ACCTGTGCTACATCTACATGGTCGGAGGGTTCTGCGCGAGTCCCCTGTTG
CAAGACGCGATCCGCGAGGAGTTCGATGATCCTGGGAGGGACTTGAAGGT
CGTCGTCGCGCCGAGGCCGGGACTGGCGGTGGTGAGTGGTCAACGCAGCT
GTCCACGCCAGACCTCCAAGACCTGTGCTACATCTACATGGTCGGAGGGT
TCTGCGCGAGTCCCCTGTTGCAAGACGCGATCCGCGAGGAGTTCGATGAT
CCTGGGAGGGACTTGAAGGTCGTCGTCGCGCCGAGGCCGGGACTGGCGGT
GGTGAGTGGT
back to top